[1] "ofn"          "-oTGBMLGG-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/GBMLGG-TP/15249296/GBMLGG-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/GBMLGG-TP/15650473/transformed.cor.cli.txt"

nPatients in clinical file=1114, in cluster file=796, common to both=796
[1] "Reduce the number of clustering variables from 189 to 188."
[1] 188 796
[1] "IDH1 MUTATION ANALYSIS"
[1] 3
  IDH1 MUTATED IDH1 WILD-TYPE 
           412            384 
  IDH1 MUTATED IDH1 WILD-TYPE 
           412            384 
[1] "TP53 MUTATION ANALYSIS"
[1] 3
  TP53 MUTATED TP53 WILD-TYPE 
           327            469 
  TP53 MUTATED TP53 WILD-TYPE 
           327            469 
[1] "ATRX MUTATION ANALYSIS"
[1] 3
  ATRX MUTATED ATRX WILD-TYPE 
           211            585 
  ATRX MUTATED ATRX WILD-TYPE 
           211            585 
[1] "PTEN MUTATION ANALYSIS"
[1] 3
  PTEN MUTATED PTEN WILD-TYPE 
           111            685 
  PTEN MUTATED PTEN WILD-TYPE 
           111            685 
[1] "CIC MUTATION ANALYSIS"
[1] 3
  CIC MUTATED CIC WILD-TYPE 
          109           687 
  CIC MUTATED CIC WILD-TYPE 
          109           687 
[1] "PIK3CA MUTATION ANALYSIS"
[1] 3
  PIK3CA MUTATED PIK3CA WILD-TYPE 
              73              723 
  PIK3CA MUTATED PIK3CA WILD-TYPE 
              73              723 
[1] "NF1 MUTATION ANALYSIS"
[1] 3
  NF1 MUTATED NF1 WILD-TYPE 
           62           734 
  NF1 MUTATED NF1 WILD-TYPE 
           62           734 
[1] "PIK3R1 MUTATION ANALYSIS"
[1] 3
  PIK3R1 MUTATED PIK3R1 WILD-TYPE 
              54              742 
  PIK3R1 MUTATED PIK3R1 WILD-TYPE 
              54              742 
[1] "NOTCH1 MUTATION ANALYSIS"
[1] 3
  NOTCH1 MUTATED NOTCH1 WILD-TYPE 
              42              754 
  NOTCH1 MUTATED NOTCH1 WILD-TYPE 
              42              754 
[1] "FUBP1 MUTATION ANALYSIS"
[1] 3
  FUBP1 MUTATED FUBP1 WILD-TYPE 
             47             749 
  FUBP1 MUTATED FUBP1 WILD-TYPE 
             47             749 
[1] "RB1 MUTATION ANALYSIS"
[1] 3
  RB1 MUTATED RB1 WILD-TYPE 
           30           766 
  RB1 MUTATED RB1 WILD-TYPE 
           30           766 
[1] "IDH2 MUTATION ANALYSIS"
[1] 3
  IDH2 MUTATED IDH2 WILD-TYPE 
            20            776 
  IDH2 MUTATED IDH2 WILD-TYPE 
            20            776 
[1] "TCF12 MUTATION ANALYSIS"
[1] 3
  TCF12 MUTATED TCF12 WILD-TYPE 
             19             777 
  TCF12 MUTATED TCF12 WILD-TYPE 
             19             777 
[1] "STK19 MUTATION ANALYSIS"
[1] 3
  STK19 MUTATED STK19 WILD-TYPE 
             11             785 
  STK19 MUTATED STK19 WILD-TYPE 
             11             785 
[1] "ARID1A MUTATION ANALYSIS"
[1] 3
  ARID1A MUTATED ARID1A WILD-TYPE 
              22              774 
  ARID1A MUTATED ARID1A WILD-TYPE 
              22              774 
[1] "NIPBL MUTATION ANALYSIS"
[1] 3
  NIPBL MUTATED NIPBL WILD-TYPE 
             20             776 
  NIPBL MUTATED NIPBL WILD-TYPE 
             20             776 
[1] "SMARCA4 MUTATION ANALYSIS"
[1] 3
  SMARCA4 MUTATED SMARCA4 WILD-TYPE 
               27               769 
  SMARCA4 MUTATED SMARCA4 WILD-TYPE 
               27               769 
[1] "CREBZF MUTATION ANALYSIS"
[1] 3
  CREBZF MUTATED CREBZF WILD-TYPE 
               9              787 
  CREBZF MUTATED CREBZF WILD-TYPE 
               9              787 
[1] "EMG1 MUTATION ANALYSIS"
[1] 3
  EMG1 MUTATED EMG1 WILD-TYPE 
             7            789 
  EMG1 MUTATED EMG1 WILD-TYPE 
             7            789 
[1] "ZNF709 MUTATION ANALYSIS"
[1] 3
  ZNF709 MUTATED ZNF709 WILD-TYPE 
               7              789 
  ZNF709 MUTATED ZNF709 WILD-TYPE 
               7              789 
[1] "RPL5 MUTATION ANALYSIS"
[1] 3
  RPL5 MUTATED RPL5 WILD-TYPE 
            10            786 
  RPL5 MUTATED RPL5 WILD-TYPE 
            10            786 
[1] "STAG2 MUTATION ANALYSIS"
[1] 3
  STAG2 MUTATED STAG2 WILD-TYPE 
             16             780 
  STAG2 MUTATED STAG2 WILD-TYPE 
             16             780 
[1] "IRS4 MUTATION ANALYSIS"
[1] 3
  IRS4 MUTATED IRS4 WILD-TYPE 
            10            786 
  IRS4 MUTATED IRS4 WILD-TYPE 
            10            786 
[1] "REN MUTATION ANALYSIS"
[1] 3
  REN MUTATED REN WILD-TYPE 
            7           789 
  REN MUTATED REN WILD-TYPE 
            7           789 
[1] "TNRC18 MUTATION ANALYSIS"
[1] 3
  TNRC18 MUTATED TNRC18 WILD-TYPE 
              12              784 
  TNRC18 MUTATED TNRC18 WILD-TYPE 
              12              784 
[1] "NRAS MUTATION ANALYSIS"
[1] 3
  NRAS MUTATED NRAS WILD-TYPE 
             5            791 
  NRAS MUTATED NRAS WILD-TYPE 
             5            791 
[1] "PLCG1 MUTATION ANALYSIS"
[1] 3
  PLCG1 MUTATED PLCG1 WILD-TYPE 
             11             785 
  PLCG1 MUTATED PLCG1 WILD-TYPE 
             11             785 
[1] "SLC26A3 MUTATION ANALYSIS"
[1] 3
  SLC26A3 MUTATED SLC26A3 WILD-TYPE 
               11               785 
  SLC26A3 MUTATED SLC26A3 WILD-TYPE 
               11               785 
[1] "ZBTB20 MUTATION ANALYSIS"
[1] 3
  ZBTB20 MUTATED ZBTB20 WILD-TYPE 
              22              774 
  ZBTB20 MUTATED ZBTB20 WILD-TYPE 
              22              774 
[1] "TRERF1 MUTATION ANALYSIS"
[1] 3
  TRERF1 MUTATED TRERF1 WILD-TYPE 
               7              789 
  TRERF1 MUTATED TRERF1 WILD-TYPE 
               7              789 
[1] "MX2 MUTATION ANALYSIS"
[1] 3
  MX2 MUTATED MX2 WILD-TYPE 
            9           787 
  MX2 MUTATED MX2 WILD-TYPE 
            9           787 
[1] "ZMIZ1 MUTATION ANALYSIS"
[1] 3
  ZMIZ1 MUTATED ZMIZ1 WILD-TYPE 
             13             783 
  ZMIZ1 MUTATED ZMIZ1 WILD-TYPE 
             13             783 
[1] "DDX5 MUTATION ANALYSIS"
[1] 3
  DDX5 MUTATED DDX5 WILD-TYPE 
             9            787 
  DDX5 MUTATED DDX5 WILD-TYPE 
             9            787 
[1] "DNMT3A MUTATION ANALYSIS"
[1] 3
  DNMT3A MUTATED DNMT3A WILD-TYPE 
              10              786 
  DNMT3A MUTATED DNMT3A WILD-TYPE 
              10              786 
[1] "PTPN11 MUTATION ANALYSIS"
[1] 3
  PTPN11 MUTATED PTPN11 WILD-TYPE 
              11              785 
  PTPN11 MUTATED PTPN11 WILD-TYPE 
              11              785 
[1] "ZNF292 MUTATION ANALYSIS"
[1] 3
  ZNF292 MUTATED ZNF292 WILD-TYPE 
              17              779 
  ZNF292 MUTATED ZNF292 WILD-TYPE 
              17              779 
[1] "DSP MUTATION ANALYSIS"
[1] 3
  DSP MUTATED DSP WILD-TYPE 
           21           775 
  DSP MUTATED DSP WILD-TYPE 
           21           775 
[1] "BRAF MUTATION ANALYSIS"
[1] 3
  BRAF MUTATED BRAF WILD-TYPE 
            11            785 
  BRAF MUTATED BRAF WILD-TYPE 
            11            785 
[1] "EGFR MUTATION ANALYSIS"
[1] 3
  EGFR MUTATED EGFR WILD-TYPE 
           109            687 
  EGFR MUTATED EGFR WILD-TYPE 
           109            687 
[1] "RBPJ MUTATION ANALYSIS"
[1] 3
  RBPJ MUTATED RBPJ WILD-TYPE 
             7            789 
  RBPJ MUTATED RBPJ WILD-TYPE 
             7            789 
[1] "SEMG2 MUTATION ANALYSIS"
[1] 3
  SEMG2 MUTATED SEMG2 WILD-TYPE 
             13             783 
  SEMG2 MUTATED SEMG2 WILD-TYPE 
             13             783 
[1] "ARID2 MUTATION ANALYSIS"
[1] 3
  ARID2 MUTATED ARID2 WILD-TYPE 
             13             783 
  ARID2 MUTATED ARID2 WILD-TYPE 
             13             783 
[1] "ANKRD36 MUTATION ANALYSIS"
[1] 3
  ANKRD36 MUTATED ANKRD36 WILD-TYPE 
                7               789 
  ANKRD36 MUTATED ANKRD36 WILD-TYPE 
                7               789 
[1] "SRPX MUTATION ANALYSIS"
[1] 3
  SRPX MUTATED SRPX WILD-TYPE 
             4            792 
  SRPX MUTATED SRPX WILD-TYPE 
             4            792 
[1] "FAM83D MUTATION ANALYSIS"
[1] 3
  FAM83D MUTATED FAM83D WILD-TYPE 
               5              791 
  FAM83D MUTATED FAM83D WILD-TYPE 
               5              791 
[1] "AK7 MUTATION ANALYSIS"
[1] 3
  AK7 MUTATED AK7 WILD-TYPE 
            9           787 
  AK7 MUTATED AK7 WILD-TYPE 
            9           787 
[1] "GAGE2D MUTATION ANALYSIS"
[1] 3
  GAGE2D MUTATED GAGE2D WILD-TYPE 
               5              791 
  GAGE2D MUTATED GAGE2D WILD-TYPE 
               5              791 
[1] "SETD2 MUTATION ANALYSIS"
[1] 3
  SETD2 MUTATED SETD2 WILD-TYPE 
             13             783 
  SETD2 MUTATED SETD2 WILD-TYPE 
             13             783 
[1] "HDAC2 MUTATION ANALYSIS"
[1] 3
  HDAC2 MUTATED HDAC2 WILD-TYPE 
              7             789 
  HDAC2 MUTATED HDAC2 WILD-TYPE 
              7             789 
[1] "TYRP1 MUTATION ANALYSIS"
[1] 3
  TYRP1 MUTATED TYRP1 WILD-TYPE 
              6             790 
  TYRP1 MUTATED TYRP1 WILD-TYPE 
              6             790 
[1] "BCOR MUTATION ANALYSIS"
[1] 3
  BCOR MUTATED BCOR WILD-TYPE 
            22            774 
  BCOR MUTATED BCOR WILD-TYPE 
            22            774 
[1] "PDGFRA MUTATION ANALYSIS"
[1] 3
  PDGFRA MUTATED PDGFRA WILD-TYPE 
              22              774 
  PDGFRA MUTATED PDGFRA WILD-TYPE 
              22              774 
[1] "FAM47C MUTATION ANALYSIS"
[1] 3
  FAM47C MUTATED FAM47C WILD-TYPE 
              23              773 
  FAM47C MUTATED FAM47C WILD-TYPE 
              23              773 
[1] "NEU2 MUTATION ANALYSIS"
[1] 3
  NEU2 MUTATED NEU2 WILD-TYPE 
             8            788 
  NEU2 MUTATED NEU2 WILD-TYPE 
             8            788 
[1] "SERPING1 MUTATION ANALYSIS"
[1] 3
  SERPING1 MUTATED SERPING1 WILD-TYPE 
                 4                792 
  SERPING1 MUTATED SERPING1 WILD-TYPE 
                 4                792 
[1] "HTRA2 MUTATION ANALYSIS"
[1] 3
  HTRA2 MUTATED HTRA2 WILD-TYPE 
              5             791 
  HTRA2 MUTATED HTRA2 WILD-TYPE 
              5             791 
[1] "NOTCH2 MUTATION ANALYSIS"
[1] 3
  NOTCH2 MUTATED NOTCH2 WILD-TYPE 
              13              783 
  NOTCH2 MUTATED NOTCH2 WILD-TYPE 
              13              783 
[1] "NKD2 MUTATION ANALYSIS"
[1] 3
  NKD2 MUTATED NKD2 WILD-TYPE 
             4            792 
  NKD2 MUTATED NKD2 WILD-TYPE 
             4            792 
[1] "TPX2 MUTATION ANALYSIS"
[1] 3
  TPX2 MUTATED TPX2 WILD-TYPE 
             7            789 
  TPX2 MUTATED TPX2 WILD-TYPE 
             7            789 
[1] "ZNF512B MUTATION ANALYSIS"
[1] 3
  ZNF512B MUTATED ZNF512B WILD-TYPE 
                5               791 
  ZNF512B MUTATED ZNF512B WILD-TYPE 
                5               791 
[1] "SPTAN1 MUTATION ANALYSIS"
[1] 3
  SPTAN1 MUTATED SPTAN1 WILD-TYPE 
               8              788 
  SPTAN1 MUTATED SPTAN1 WILD-TYPE 
               8              788 
[1] "THRA MUTATION ANALYSIS"
[1] 3
  THRA MUTATED THRA WILD-TYPE 
             5            791 
  THRA MUTATED THRA WILD-TYPE 
             5            791 
[1] "RGS3 MUTATION ANALYSIS"
[1] 3
  RGS3 MUTATED RGS3 WILD-TYPE 
             8            788 
  RGS3 MUTATED RGS3 WILD-TYPE 
             8            788 
[1] "PROKR2 MUTATION ANALYSIS"
[1] 3
  PROKR2 MUTATED PROKR2 WILD-TYPE 
               9              787 
  PROKR2 MUTATED PROKR2 WILD-TYPE 
               9              787 
[1] "SLC6A14 MUTATION ANALYSIS"
[1] 3
  SLC6A14 MUTATED SLC6A14 WILD-TYPE 
                7               789 
  SLC6A14 MUTATED SLC6A14 WILD-TYPE 
                7               789 
[1] "MST1 MUTATION ANALYSIS"
[1] 3
  MST1 MUTATED MST1 WILD-TYPE 
             6            790 
  MST1 MUTATED MST1 WILD-TYPE 
             6            790 
[1] "NUP210L MUTATION ANALYSIS"
[1] 3
  NUP210L MUTATED NUP210L WILD-TYPE 
               12               784 
  NUP210L MUTATED NUP210L WILD-TYPE 
               12               784 
[1] "MED9 MUTATION ANALYSIS"
[1] 3
  MED9 MUTATED MED9 WILD-TYPE 
             3            793 
  MED9 MUTATED MED9 WILD-TYPE 
             3            793 
[1] "ZDHHC4 MUTATION ANALYSIS"
[1] 3
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               4              792 
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               4              792 
[1] "MATK MUTATION ANALYSIS"
[1] 3
  MATK MUTATED MATK WILD-TYPE 
             9            787 
  MATK MUTATED MATK WILD-TYPE 
             9            787 
[1] "KDR MUTATION ANALYSIS"
[1] 3
  KDR MUTATED KDR WILD-TYPE 
           13           783 
  KDR MUTATED KDR WILD-TYPE 
           13           783 
[1] "WRN MUTATION ANALYSIS"
[1] 3
  WRN MUTATED WRN WILD-TYPE 
            6           790 
  WRN MUTATED WRN WILD-TYPE 
            6           790 
[1] "G6PC MUTATION ANALYSIS"
[1] 3
  G6PC MUTATED G6PC WILD-TYPE 
             7            789 
  G6PC MUTATED G6PC WILD-TYPE 
             7            789 
[1] "TMEM184A MUTATION ANALYSIS"
[1] 3
  TMEM184A MUTATED TMEM184A WILD-TYPE 
                 3                793 
  TMEM184A MUTATED TMEM184A WILD-TYPE 
                 3                793 
[1] "PDHA1 MUTATION ANALYSIS"
[1] 3
  PDHA1 MUTATED PDHA1 WILD-TYPE 
              6             790 
  PDHA1 MUTATED PDHA1 WILD-TYPE 
              6             790 
[1] "TMEM229B MUTATION ANALYSIS"
[1] 3
  TMEM229B MUTATED TMEM229B WILD-TYPE 
                 4                792 
  TMEM229B MUTATED TMEM229B WILD-TYPE 
                 4                792 
[1] "CD44 MUTATION ANALYSIS"
[1] 3
  CD44 MUTATED CD44 WILD-TYPE 
             6            790 
  CD44 MUTATED CD44 WILD-TYPE 
             6            790 
[1] "BCLAF1 MUTATION ANALYSIS"
[1] 3
  BCLAF1 MUTATED BCLAF1 WILD-TYPE 
              12              784 
  BCLAF1 MUTATED BCLAF1 WILD-TYPE 
              12              784 
[1] "POM121 MUTATION ANALYSIS"
[1] 3
  POM121 MUTATED POM121 WILD-TYPE 
               6              790 
  POM121 MUTATED POM121 WILD-TYPE 
               6              790 
[1] "SLC6A3 MUTATION ANALYSIS"
[1] 3
  SLC6A3 MUTATED SLC6A3 WILD-TYPE 
              12              784 
  SLC6A3 MUTATED SLC6A3 WILD-TYPE 
              12              784 
[1] "SMOC1 MUTATION ANALYSIS"
[1] 3
  SMOC1 MUTATED SMOC1 WILD-TYPE 
              4             792 
  SMOC1 MUTATED SMOC1 WILD-TYPE 
              4             792 
[1] "MYT1 MUTATION ANALYSIS"
[1] 3
  MYT1 MUTATED MYT1 WILD-TYPE 
             6            790 
  MYT1 MUTATED MYT1 WILD-TYPE 
             6            790 
[1] "DOCK5 MUTATION ANALYSIS"
[1] 3
  DOCK5 MUTATED DOCK5 WILD-TYPE 
             20             776 
  DOCK5 MUTATED DOCK5 WILD-TYPE 
             20             776 
[1] "SLFN11 MUTATION ANALYSIS"
[1] 3
  SLFN11 MUTATED SLFN11 WILD-TYPE 
               5              791 
  SLFN11 MUTATED SLFN11 WILD-TYPE 
               5              791 
[1] "DLC1 MUTATION ANALYSIS"
[1] 3
  DLC1 MUTATED DLC1 WILD-TYPE 
             9            787 
  DLC1 MUTATED DLC1 WILD-TYPE 
             9            787 
[1] "PPL MUTATION ANALYSIS"
[1] 3
  PPL MUTATED PPL WILD-TYPE 
            9           787 
  PPL MUTATED PPL WILD-TYPE 
            9           787 
[1] "CMA1 MUTATION ANALYSIS"
[1] 3
  CMA1 MUTATED CMA1 WILD-TYPE 
             3            793 
  CMA1 MUTATED CMA1 WILD-TYPE 
             3            793 
[1] "PRKCD MUTATION ANALYSIS"
[1] 3
  PRKCD MUTATED PRKCD WILD-TYPE 
              3             793 
  PRKCD MUTATED PRKCD WILD-TYPE 
              3             793 
[1] "ANO1 MUTATION ANALYSIS"
[1] 3
  ANO1 MUTATED ANO1 WILD-TYPE 
             9            787 
  ANO1 MUTATED ANO1 WILD-TYPE 
             9            787 
[1] "PLXNA3 MUTATION ANALYSIS"
[1] 3
  PLXNA3 MUTATED PLXNA3 WILD-TYPE 
              10              786 
  PLXNA3 MUTATED PLXNA3 WILD-TYPE 
              10              786 
[1] "NAP1L2 MUTATION ANALYSIS"
[1] 3
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               6              790 
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               6              790 
[1] "PLCH2 MUTATION ANALYSIS"
[1] 3
  PLCH2 MUTATED PLCH2 WILD-TYPE 
              6             790 
  PLCH2 MUTATED PLCH2 WILD-TYPE 
              6             790 
[1] "CD1D MUTATION ANALYSIS"
[1] 3
  CD1D MUTATED CD1D WILD-TYPE 
             4            792 
  CD1D MUTATED CD1D WILD-TYPE 
             4            792 
[1] "UBR3 MUTATION ANALYSIS"
[1] 3
  UBR3 MUTATED UBR3 WILD-TYPE 
             5            791 
  UBR3 MUTATED UBR3 WILD-TYPE 
             5            791 
[1] "CNOT1 MUTATION ANALYSIS"
[1] 3
  CNOT1 MUTATED CNOT1 WILD-TYPE 
              8             788 
  CNOT1 MUTATED CNOT1 WILD-TYPE 
              8             788 
[1] "ESR2 MUTATION ANALYSIS"
[1] 3
  ESR2 MUTATED ESR2 WILD-TYPE 
             6            790 
  ESR2 MUTATED ESR2 WILD-TYPE 
             6            790 
[1] "TNFRSF9 MUTATION ANALYSIS"
[1] 3
  TNFRSF9 MUTATED TNFRSF9 WILD-TYPE 
                4               792 
  TNFRSF9 MUTATED TNFRSF9 WILD-TYPE 
                4               792 
[1] "USP11 MUTATION ANALYSIS"
[1] 3
  USP11 MUTATED USP11 WILD-TYPE 
             10             786 
  USP11 MUTATED USP11 WILD-TYPE 
             10             786 
[1] "CYP11A1 MUTATION ANALYSIS"
[1] 3
  CYP11A1 MUTATED CYP11A1 WILD-TYPE 
                7               789 
  CYP11A1 MUTATED CYP11A1 WILD-TYPE 
                7               789 
[1] "NCAPH2 MUTATION ANALYSIS"
[1] 3
  NCAPH2 MUTATED NCAPH2 WILD-TYPE 
               4              792 
  NCAPH2 MUTATED NCAPH2 WILD-TYPE 
               4              792 
[1] "PRB3 MUTATION ANALYSIS"
[1] 3
  PRB3 MUTATED PRB3 WILD-TYPE 
             3            793 
  PRB3 MUTATED PRB3 WILD-TYPE 
             3            793 
[1] "TRPV6 MUTATION ANALYSIS"
[1] 3
  TRPV6 MUTATED TRPV6 WILD-TYPE 
             13             783 
  TRPV6 MUTATED TRPV6 WILD-TYPE 
             13             783 
[1] "AOX1 MUTATION ANALYSIS"
[1] 3
  AOX1 MUTATED AOX1 WILD-TYPE 
             8            788 
  AOX1 MUTATED AOX1 WILD-TYPE 
             8            788 
[1] "EEF1A1 MUTATION ANALYSIS"
[1] 3
  EEF1A1 MUTATED EEF1A1 WILD-TYPE 
               8              788 
  EEF1A1 MUTATED EEF1A1 WILD-TYPE 
               8              788 
[1] "ZZZ3 MUTATION ANALYSIS"
[1] 3
  ZZZ3 MUTATED ZZZ3 WILD-TYPE 
             4            792 
  ZZZ3 MUTATED ZZZ3 WILD-TYPE 
             4            792 
[1] "PAK1 MUTATION ANALYSIS"
[1] 3
  PAK1 MUTATED PAK1 WILD-TYPE 
             3            793 
  PAK1 MUTATED PAK1 WILD-TYPE 
             3            793 
[1] "RASGRF2 MUTATION ANALYSIS"
[1] 3
  RASGRF2 MUTATED RASGRF2 WILD-TYPE 
                6               790 
  RASGRF2 MUTATED RASGRF2 WILD-TYPE 
                6               790 
[1] "WWC3 MUTATION ANALYSIS"
[1] 3
  WWC3 MUTATED WWC3 WILD-TYPE 
            11            785 
  WWC3 MUTATED WWC3 WILD-TYPE 
            11            785 
[1] "TTC30B MUTATION ANALYSIS"
[1] 3
  TTC30B MUTATED TTC30B WILD-TYPE 
               7              789 
  TTC30B MUTATED TTC30B WILD-TYPE 
               7              789 
[1] "ROBO3 MUTATION ANALYSIS"
[1] 3
  ROBO3 MUTATED ROBO3 WILD-TYPE 
              5             791 
  ROBO3 MUTATED ROBO3 WILD-TYPE 
              5             791 
[1] "SOX13 MUTATION ANALYSIS"
[1] 3
  SOX13 MUTATED SOX13 WILD-TYPE 
              5             791 
  SOX13 MUTATED SOX13 WILD-TYPE 
              5             791 
[1] "ST3GAL6 MUTATION ANALYSIS"
[1] 3
  ST3GAL6 MUTATED ST3GAL6 WILD-TYPE 
                5               791 
  ST3GAL6 MUTATED ST3GAL6 WILD-TYPE 
                5               791 
[1] "CLCN7 MUTATION ANALYSIS"
[1] 3
  CLCN7 MUTATED CLCN7 WILD-TYPE 
              7             789 
  CLCN7 MUTATED CLCN7 WILD-TYPE 
              7             789 
[1] "CD99L2 MUTATION ANALYSIS"
[1] 3
  CD99L2 MUTATED CD99L2 WILD-TYPE 
               5              791 
  CD99L2 MUTATED CD99L2 WILD-TYPE 
               5              791 
[1] "KRAS MUTATION ANALYSIS"
[1] 3
  KRAS MUTATED KRAS WILD-TYPE 
             4            792 
  KRAS MUTATED KRAS WILD-TYPE 
             4            792 
[1] "PRG4 MUTATION ANALYSIS"
[1] 3
  PRG4 MUTATED PRG4 WILD-TYPE 
            10            786 
  PRG4 MUTATED PRG4 WILD-TYPE 
            10            786 
[1] "USP6 MUTATION ANALYSIS"
[1] 3
  USP6 MUTATED USP6 WILD-TYPE 
            11            785 
  USP6 MUTATED USP6 WILD-TYPE 
            11            785 
[1] "TP63 MUTATION ANALYSIS"
[1] 3
  TP63 MUTATED TP63 WILD-TYPE 
             9            787 
  TP63 MUTATED TP63 WILD-TYPE 
             9            787 
[1] "OR52M1 MUTATION ANALYSIS"
[1] 3
  OR52M1 MUTATED OR52M1 WILD-TYPE 
               8              788 
  OR52M1 MUTATED OR52M1 WILD-TYPE 
               8              788 
[1] "TNFSF9 MUTATION ANALYSIS"
[1] 3
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               5              791 
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               5              791 
[1] "HEATR3 MUTATION ANALYSIS"
[1] 3
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               4              792 
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               4              792 
[1] "USP28 MUTATION ANALYSIS"
[1] 3
  USP28 MUTATED USP28 WILD-TYPE 
              5             791 
  USP28 MUTATED USP28 WILD-TYPE 
              5             791 
[1] "ACADS MUTATION ANALYSIS"
[1] 3
  ACADS MUTATED ACADS WILD-TYPE 
              5             791 
  ACADS MUTATED ACADS WILD-TYPE 
              5             791 
[1] "RGL2 MUTATION ANALYSIS"
[1] 3
  RGL2 MUTATED RGL2 WILD-TYPE 
             4            792 
  RGL2 MUTATED RGL2 WILD-TYPE 
             4            792 
[1] "DSG3 MUTATION ANALYSIS"
[1] 3
  DSG3 MUTATED DSG3 WILD-TYPE 
            11            785 
  DSG3 MUTATED DSG3 WILD-TYPE 
            11            785 
[1] "MYO5A MUTATION ANALYSIS"
[1] 3
  MYO5A MUTATED MYO5A WILD-TYPE 
              5             791 
  MYO5A MUTATED MYO5A WILD-TYPE 
              5             791 
[1] "TMPRSS6 MUTATION ANALYSIS"
[1] 3
  TMPRSS6 MUTATED TMPRSS6 WILD-TYPE 
                9               787 
  TMPRSS6 MUTATED TMPRSS6 WILD-TYPE 
                9               787 
[1] "DYNC1I1 MUTATION ANALYSIS"
[1] 3
  DYNC1I1 MUTATED DYNC1I1 WILD-TYPE 
               10               786 
  DYNC1I1 MUTATED DYNC1I1 WILD-TYPE 
               10               786 
[1] "PASD1 MUTATION ANALYSIS"
[1] 3
  PASD1 MUTATED PASD1 WILD-TYPE 
              9             787 
  PASD1 MUTATED PASD1 WILD-TYPE 
              9             787 
[1] "RPL7 MUTATION ANALYSIS"
[1] 3
  RPL7 MUTATED RPL7 WILD-TYPE 
             3            793 
  RPL7 MUTATED RPL7 WILD-TYPE 
             3            793 
[1] "CES3 MUTATION ANALYSIS"
[1] 3
  CES3 MUTATED CES3 WILD-TYPE 
             4            792 
  CES3 MUTATED CES3 WILD-TYPE 
             4            792 
[1] "CLEC12A MUTATION ANALYSIS"
[1] 3
  CLEC12A MUTATED CLEC12A WILD-TYPE 
                5               791 
  CLEC12A MUTATED CLEC12A WILD-TYPE 
                5               791 
[1] "CACNA1S MUTATION ANALYSIS"
[1] 3
  CACNA1S MUTATED CACNA1S WILD-TYPE 
               14               782 
  CACNA1S MUTATED CACNA1S WILD-TYPE 
               14               782 
[1] "SON MUTATION ANALYSIS"
[1] 3
  SON MUTATED SON WILD-TYPE 
            9           787 
  SON MUTATED SON WILD-TYPE 
            9           787 
[1] "SLC35A2 MUTATION ANALYSIS"
[1] 3
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                3               793 
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                3               793 
[1] "OR2A12 MUTATION ANALYSIS"
[1] 3
  OR2A12 MUTATED OR2A12 WILD-TYPE 
               7              789 
  OR2A12 MUTATED OR2A12 WILD-TYPE 
               7              789 
[1] "PLCG2 MUTATION ANALYSIS"
[1] 3
  PLCG2 MUTATED PLCG2 WILD-TYPE 
             11             785 
  PLCG2 MUTATED PLCG2 WILD-TYPE 
             11             785 
[1] "HTT MUTATION ANALYSIS"
[1] 3
  HTT MUTATED HTT WILD-TYPE 
            5           791 
  HTT MUTATED HTT WILD-TYPE 
            5           791 
[1] "MAP3K1 MUTATION ANALYSIS"
[1] 3
  MAP3K1 MUTATED MAP3K1 WILD-TYPE 
               9              787 
  MAP3K1 MUTATED MAP3K1 WILD-TYPE 
               9              787 
[1] "BBS9 MUTATION ANALYSIS"
[1] 3
  BBS9 MUTATED BBS9 WILD-TYPE 
             5            791 
  BBS9 MUTATED BBS9 WILD-TYPE 
             5            791 
[1] "CSNK2B MUTATION ANALYSIS"
[1] 3
  CSNK2B MUTATED CSNK2B WILD-TYPE 
               3              793 
  CSNK2B MUTATED CSNK2B WILD-TYPE 
               3              793 
[1] "CCDC110 MUTATION ANALYSIS"
[1] 3
  CCDC110 MUTATED CCDC110 WILD-TYPE 
                7               789 
  CCDC110 MUTATED CCDC110 WILD-TYPE 
                7               789 
[1] "ATF7IP2 MUTATION ANALYSIS"
[1] 3
  ATF7IP2 MUTATED ATF7IP2 WILD-TYPE 
                8               788 
  ATF7IP2 MUTATED ATF7IP2 WILD-TYPE 
                8               788 
[1] "QKI MUTATION ANALYSIS"
[1] 3
  QKI MUTATED QKI WILD-TYPE 
            6           790 
  QKI MUTATED QKI WILD-TYPE 
            6           790 
[1] "CD72 MUTATION ANALYSIS"
[1] 3
  CD72 MUTATED CD72 WILD-TYPE 
             3            793 
  CD72 MUTATED CD72 WILD-TYPE 
             3            793 
[1] "SPINT1 MUTATION ANALYSIS"
[1] 3
  SPINT1 MUTATED SPINT1 WILD-TYPE 
               6              790 
  SPINT1 MUTATED SPINT1 WILD-TYPE 
               6              790 
[1] "MORN5 MUTATION ANALYSIS"
[1] 3
  MORN5 MUTATED MORN5 WILD-TYPE 
              3             793 
  MORN5 MUTATED MORN5 WILD-TYPE 
              3             793 
[1] "EGR1 MUTATION ANALYSIS"
[1] 3
  EGR1 MUTATED EGR1 WILD-TYPE 
             5            791 
  EGR1 MUTATED EGR1 WILD-TYPE 
             5            791 
[1] "OR2A25 MUTATION ANALYSIS"
[1] 3
  OR2A25 MUTATED OR2A25 WILD-TYPE 
               6              790 
  OR2A25 MUTATED OR2A25 WILD-TYPE 
               6              790 
[1] "PDGFRB MUTATION ANALYSIS"
[1] 3
  PDGFRB MUTATED PDGFRB WILD-TYPE 
               4              792 
  PDGFRB MUTATED PDGFRB WILD-TYPE 
               4              792 
[1] "MTMR12 MUTATION ANALYSIS"
[1] 3
  MTMR12 MUTATED MTMR12 WILD-TYPE 
               4              792 
  MTMR12 MUTATED MTMR12 WILD-TYPE 
               4              792 
[1] "AMBRA1 MUTATION ANALYSIS"
[1] 3
  AMBRA1 MUTATED AMBRA1 WILD-TYPE 
               6              790 
  AMBRA1 MUTATED AMBRA1 WILD-TYPE 
               6              790 
[1] "BTNL2 MUTATION ANALYSIS"
[1] 3
  BTNL2 MUTATED BTNL2 WILD-TYPE 
              4             792 
  BTNL2 MUTATED BTNL2 WILD-TYPE 
              4             792 
[1] "RPTN MUTATION ANALYSIS"
[1] 3
  RPTN MUTATED RPTN WILD-TYPE 
             8            788 
  RPTN MUTATED RPTN WILD-TYPE 
             8            788 
[1] "ZNF148 MUTATION ANALYSIS"
[1] 3
  ZNF148 MUTATED ZNF148 WILD-TYPE 
               5              791 
  ZNF148 MUTATED ZNF148 WILD-TYPE 
               5              791 
[1] "GFRA4 MUTATION ANALYSIS"
[1] 3
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              3             793 
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              3             793 
[1] "SLC6A4 MUTATION ANALYSIS"
[1] 3
  SLC6A4 MUTATED SLC6A4 WILD-TYPE 
               6              790 
  SLC6A4 MUTATED SLC6A4 WILD-TYPE 
               6              790 
[1] "CCDC135 MUTATION ANALYSIS"
[1] 3
  CCDC135 MUTATED CCDC135 WILD-TYPE 
                8               788 
  CCDC135 MUTATED CCDC135 WILD-TYPE 
                8               788 
[1] "RUVBL2 MUTATION ANALYSIS"
[1] 3
  RUVBL2 MUTATED RUVBL2 WILD-TYPE 
               4              792 
  RUVBL2 MUTATED RUVBL2 WILD-TYPE 
               4              792 
[1] "PYGL MUTATION ANALYSIS"
[1] 3
  PYGL MUTATED PYGL WILD-TYPE 
             4            792 
  PYGL MUTATED PYGL WILD-TYPE 
             4            792 
[1] "ASXL2 MUTATION ANALYSIS"
[1] 3
  ASXL2 MUTATED ASXL2 WILD-TYPE 
              3             793 
  ASXL2 MUTATED ASXL2 WILD-TYPE 
              3             793 
[1] "CIB1 MUTATION ANALYSIS"
[1] 3
  CIB1 MUTATED CIB1 WILD-TYPE 
             5            791 
  CIB1 MUTATED CIB1 WILD-TYPE 
             5            791 
[1] "REXO1 MUTATION ANALYSIS"
[1] 3
  REXO1 MUTATED REXO1 WILD-TYPE 
              8             788 
  REXO1 MUTATED REXO1 WILD-TYPE 
              8             788 
[1] "SOX4 MUTATION ANALYSIS"
[1] 3
  SOX4 MUTATED SOX4 WILD-TYPE 
             7            789 
  SOX4 MUTATED SOX4 WILD-TYPE 
             7            789 
[1] "GLYAT MUTATION ANALYSIS"
[1] 3
  GLYAT MUTATED GLYAT WILD-TYPE 
              5             791 
  GLYAT MUTATED GLYAT WILD-TYPE 
              5             791 
[1] "LYPD4 MUTATION ANALYSIS"
[1] 3
  LYPD4 MUTATED LYPD4 WILD-TYPE 
              5             791 
  LYPD4 MUTATED LYPD4 WILD-TYPE 
              5             791 
[1] "EPS8L1 MUTATION ANALYSIS"
[1] 3
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               5              791 
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               5              791 
[1] "CNOT4 MUTATION ANALYSIS"
[1] 3
  CNOT4 MUTATED CNOT4 WILD-TYPE 
              6             790 
  CNOT4 MUTATED CNOT4 WILD-TYPE 
              6             790 
[1] "MYH8 MUTATION ANALYSIS"
[1] 3
  MYH8 MUTATED MYH8 WILD-TYPE 
            21            775 
  MYH8 MUTATED MYH8 WILD-TYPE 
            21            775 
[1] "DPYS MUTATION ANALYSIS"
[1] 3
  DPYS MUTATED DPYS WILD-TYPE 
             5            791 
  DPYS MUTATED DPYS WILD-TYPE 
             5            791 
[1] "TLR7 MUTATION ANALYSIS"
[1] 3
  TLR7 MUTATED TLR7 WILD-TYPE 
            10            786 
  TLR7 MUTATED TLR7 WILD-TYPE 
            10            786 
[1] "MYH11 MUTATION ANALYSIS"
[1] 3
  MYH11 MUTATED MYH11 WILD-TYPE 
             14             782 
  MYH11 MUTATED MYH11 WILD-TYPE 
             14             782 
[1] "SLC9A4 MUTATION ANALYSIS"
[1] 3
  SLC9A4 MUTATED SLC9A4 WILD-TYPE 
              11              785 
  SLC9A4 MUTATED SLC9A4 WILD-TYPE 
              11              785 
[1] "SEMA3C MUTATION ANALYSIS"
[1] 3
  SEMA3C MUTATED SEMA3C WILD-TYPE 
              12              784 
  SEMA3C MUTATED SEMA3C WILD-TYPE 
              12              784 
[1] "PAN3 MUTATION ANALYSIS"
[1] 3
  PAN3 MUTATED PAN3 WILD-TYPE 
             7            789 
  PAN3 MUTATED PAN3 WILD-TYPE 
             7            789 
[1] "KRT15 MUTATION ANALYSIS"
[1] 3
  KRT15 MUTATED KRT15 WILD-TYPE 
              8             788 
  KRT15 MUTATED KRT15 WILD-TYPE 
              8             788 
[1] "FMR1 MUTATION ANALYSIS"
[1] 3
  FMR1 MUTATED FMR1 WILD-TYPE 
             5            791 
  FMR1 MUTATED FMR1 WILD-TYPE 
             5            791 
[1] "PPP2R5E MUTATION ANALYSIS"
[1] 3
  PPP2R5E MUTATED PPP2R5E WILD-TYPE 
                3               793 
  PPP2R5E MUTATED PPP2R5E WILD-TYPE 
                3               793 
[1] "ZC3H11A MUTATION ANALYSIS"
[1] 3
  ZC3H11A MUTATED ZC3H11A WILD-TYPE 
                5               791 
  ZC3H11A MUTATED ZC3H11A WILD-TYPE 
                5               791 
[1] "DST MUTATION ANALYSIS"
[1] 3
  DST MUTATED DST WILD-TYPE 
           16           780 
  DST MUTATED DST WILD-TYPE 
           16           780 
[1] "NKPD1 MUTATION ANALYSIS"
[1] 3
  NKPD1 MUTATED NKPD1 WILD-TYPE 
              3             793 
  NKPD1 MUTATED NKPD1 WILD-TYPE 
              3             793 
[1] "CTBP2 MUTATION ANALYSIS"
[1] 3
  CTBP2 MUTATED CTBP2 WILD-TYPE 
              3             793 
  CTBP2 MUTATED CTBP2 WILD-TYPE 
              3             793 
[1] "SEC14L4 MUTATION ANALYSIS"
[1] 3
  SEC14L4 MUTATED SEC14L4 WILD-TYPE 
                3               793 
  SEC14L4 MUTATED SEC14L4 WILD-TYPE 
                3               793 
[1] "KEL MUTATION ANALYSIS"
[1] 3
  KEL MUTATED KEL WILD-TYPE 
           24           772 
  KEL MUTATED KEL WILD-TYPE 
           24           772 
[1] "SSTR4 MUTATION ANALYSIS"
[1] 3
  SSTR4 MUTATED SSTR4 WILD-TYPE 
             11             785 
  SSTR4 MUTATED SSTR4 WILD-TYPE 
             11             785 
[1] "SMARCB1 MUTATION ANALYSIS"
[1] 3
  SMARCB1 MUTATED SMARCB1 WILD-TYPE 
                4               792 
  SMARCB1 MUTATED SMARCB1 WILD-TYPE 
                4               792 
[1] "CAPN11 MUTATION ANALYSIS"
[1] 3
  CAPN11 MUTATED CAPN11 WILD-TYPE 
               5              791 
  CAPN11 MUTATED CAPN11 WILD-TYPE 
               5              791 
[1] "SH3KBP1 MUTATION ANALYSIS"
[1] 3
  SH3KBP1 MUTATED SH3KBP1 WILD-TYPE 
                4               792 
  SH3KBP1 MUTATED SH3KBP1 WILD-TYPE 
                4               792 
[1] "data2feature, selection=ALL"
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "MIR_CNMF"                    "MIR_CHIERARCHICAL"          
 [5] "CN_CNMF"                     "METHLYATION_CNMF"           
 [7] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [9] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[11] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 12 rows and 796 columns.

Variable 1:'MRNA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'MRNA_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MIR_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MIR_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'METHLYATION_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 11:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "## **** detect survival parameters (defined in index such as ind_OS, ind_MFS, ind_RFS, ind_RFS, ind_BCR and ind_d2ssd) *** ##"
[1] "detected survival parameters using [ind_OS, overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_OS, curated_overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_TCGAOS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survivial parameters using [ind_MFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_RFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_BCR]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_Progression]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [index_additional_survival_time]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using condition: [is.null(surv.mat)&&(selection=='SURV')]"
[1] "survival parameters accumulated so far"
NULL
[1] "************ conversion from categorical data to rank data ********** "
[1] "****** SUMMARY ***** "
Output Data has 796 columns, 0 survival variables, and 12 non-survival variables.
[1] "* survival variables: "
NULL
[1] "* non-survival variables: "
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "MIR_CNMF"                    "MIR_CHIERARCHICAL"          
 [5] "CN_CNMF"                     "METHLYATION_CNMF"           
 [7] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [9] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[11] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
MRNA_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNA_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MIR_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIR_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE

Clustering(1) Variable = IDH1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH1 MUTATED        1      3      0      9
  IDH1 WILD-TYPE     68     40     74     45
D1V1, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1            1             68
  CLUS_2            3             40
  CLUS_3            0             74
  CLUS_4            9             45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH1 MUTATED        0     13      0      0
  IDH1 WILD-TYPE     63     37     48     79
D1V2, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1            0             63
  CLUS_2           13             37
  CLUS_3            0             48
  CLUS_4            0             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH1 MUTATED        0     13      1      0
  IDH1 WILD-TYPE     77     80     44     60
D1V3, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1            0             77
  CLUS_2           13             80
  CLUS_3            1             44
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH1 MUTATED       13      0      1
  IDH1 WILD-TYPE    125     61     75
D1V4, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1           13            125
  CLUS_2            0             61
  CLUS_3            1             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH1 MUTATED        4    403      2
  IDH1 WILD-TYPE    291     78      5
D1V5, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1            4            291
  CLUS_2          403             78
  CLUS_3            2              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH1 MUTATED        0    228     22    153
  IDH1 WILD-TYPE    160      4     42     13
D1V6, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1            0            160
  CLUS_2          228              4
  CLUS_3           22             42
  CLUS_4          153             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH1 MUTATED       27    228    151
  IDH1 WILD-TYPE    200      7     41
D1V7, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1           27            200
  CLUS_2          228              7
  CLUS_3          151             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH1 MUTATED        1    181    224
  IDH1 WILD-TYPE    195      9     44
D1V8, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1            1            195
  CLUS_2          181              9
  CLUS_3          224             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH1 MUTATED       97     73    146     78
  IDH1 WILD-TYPE     39     34     37      5
D1V9, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1           97             39
  CLUS_2           73             34
  CLUS_3          146             37
  CLUS_4           78              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH1 MUTATED      207    152     35
  IDH1 WILD-TYPE     15     32     68
D1V10, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1          207             15
  CLUS_2          152             32
  CLUS_3           35             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH1 MUTATED      114    153    124
  IDH1 WILD-TYPE     70      9     35
D1V11, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1          114             70
  CLUS_2          153              9
  CLUS_3          124             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH1 MUTATED       84    129    161     17
  IDH1 WILD-TYPE      6      9     27     72
D1V12, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1           84              6
  CLUS_2          129              9
  CLUS_3          161             27
  CLUS_4           17             72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = TP53 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       16     19     11     22
  TP53 WILD-TYPE     53     24     63     32
D2V1, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           16             53
  CLUS_2           19             24
  CLUS_3           11             63
  CLUS_4           22             32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       15     30      7     16
  TP53 WILD-TYPE     48     20     41     63
D2V2, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           15             48
  CLUS_2           30             20
  CLUS_3            7             41
  CLUS_4           16             63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       12     39     10     18
  TP53 WILD-TYPE     65     54     35     42
D2V3, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           12             65
  CLUS_2           39             54
  CLUS_3           10             35
  CLUS_4           18             42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED       47     15     17
  TP53 WILD-TYPE     91     46     59
D2V4, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           47             91
  CLUS_2           15             46
  CLUS_3           17             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED       67    255      4
  TP53 WILD-TYPE    228    226      3
D2V5, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           67            228
  CLUS_2          255            226
  CLUS_3            4              3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       33    221     12      8
  TP53 WILD-TYPE    127     11     52    158
D2V6, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           33            127
  CLUS_2          221             11
  CLUS_3           12             52
  CLUS_4            8            158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED       70    155     67
  TP53 WILD-TYPE    157     80    125
D2V7, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           70            157
  CLUS_2          155             80
  CLUS_3           67            125
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED       43    176     73
  TP53 WILD-TYPE    153     14    195
D2V8, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           43            153
  CLUS_2          176             14
  CLUS_3           73            195
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       82     70     74     18
  TP53 WILD-TYPE     54     37    109     65
D2V9, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           82             54
  CLUS_2           70             37
  CLUS_3           74            109
  CLUS_4           18             65
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED      133     71     40
  TP53 WILD-TYPE     89    113     63
D2V10, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1          133             89
  CLUS_2           71            113
  CLUS_3           40             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED       98     79     64
  TP53 WILD-TYPE     86     83     95
D2V11, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           98             86
  CLUS_2           79             83
  CLUS_3           64             95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       79     56     85     21
  TP53 WILD-TYPE     11     82    103     68
D2V12, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           79             11
  CLUS_2           56             82
  CLUS_3           85            103
  CLUS_4           21             68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = ATRX MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATRX MUTATED        2      4      0      7
  ATRX WILD-TYPE     67     39     74     47
D3V1, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1            2             67
  CLUS_2            4             39
  CLUS_3            0             74
  CLUS_4            7             47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATRX MUTATED        0     11      0      2
  ATRX WILD-TYPE     63     39     48     77
D3V2, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1            0             63
  CLUS_2           11             39
  CLUS_3            0             48
  CLUS_4            2             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATRX MUTATED        2     11      3      0
  ATRX WILD-TYPE     75     82     42     60
D3V3, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1            2             75
  CLUS_2           11             82
  CLUS_3            3             42
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATRX MUTATED       13      0      3
  ATRX WILD-TYPE    125     61     73
D3V4, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1           13            125
  CLUS_2            0             61
  CLUS_3            3             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATRX MUTATED        5    204      1
  ATRX WILD-TYPE    290    277      6
D3V5, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1            5            290
  CLUS_2          204            277
  CLUS_3            1              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATRX MUTATED        6    178     14      4
  ATRX WILD-TYPE    154     54     50    162
D3V6, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1            6            154
  CLUS_2          178             54
  CLUS_3           14             50
  CLUS_4            4            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATRX MUTATED       25    123     55
  ATRX WILD-TYPE    202    112    137
D3V7, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1           25            202
  CLUS_2          123            112
  CLUS_3           55            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATRX MUTATED        5    140     58
  ATRX WILD-TYPE    191     50    210
D3V8, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1            5            191
  CLUS_2          140             50
  CLUS_3           58            210
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATRX MUTATED       60     60     59     12
  ATRX WILD-TYPE     76     47    124     71
D3V9, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1           60             76
  CLUS_2           60             47
  CLUS_3           59            124
  CLUS_4           12             71
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATRX MUTATED      108     58     25
  ATRX WILD-TYPE    114    126     78
D3V10, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1          108            114
  CLUS_2           58            126
  CLUS_3           25             78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATRX MUTATED       76     60     52
  ATRX WILD-TYPE    108    102    107
D3V11, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1           76            108
  CLUS_2           60            102
  CLUS_3           52            107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATRX MUTATED       62     43     69     14
  ATRX WILD-TYPE     28     95    119     75
D3V12, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1           62             28
  CLUS_2           43             95
  CLUS_3           69            119
  CLUS_4           14             75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = PTEN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED       25     10     18     22
  PTEN WILD-TYPE     44     33     56     32
D4V1, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           25             44
  CLUS_2           10             33
  CLUS_3           18             56
  CLUS_4           22             32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED       18     16      9     32
  PTEN WILD-TYPE     45     34     39     47
D4V2, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           18             45
  CLUS_2           16             34
  CLUS_3            9             39
  CLUS_4           32             47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED       30     19     18     20
  PTEN WILD-TYPE     47     74     27     40
D4V3, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           30             47
  CLUS_2           19             74
  CLUS_3           18             27
  CLUS_4           20             40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED       45     21     21
  PTEN WILD-TYPE     93     40     55
D4V4, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           45             93
  CLUS_2           21             40
  CLUS_3           21             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED       91     16      2
  PTEN WILD-TYPE    204    465      5
D4V5, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           91            204
  CLUS_2           16            465
  CLUS_3            2              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED       47      3      6      1
  PTEN WILD-TYPE    113    229     58    165
D4V6, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           47            113
  CLUS_2            3            229
  CLUS_3            6             58
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED       62      4      3
  PTEN WILD-TYPE    165    231    189
D4V7, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           62            165
  CLUS_2            4            231
  CLUS_3            3            189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED       61      4      4
  PTEN WILD-TYPE    135    186    264
D4V8, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           61            135
  CLUS_2            4            186
  CLUS_3            4            264
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED       12      8      3      1
  PTEN WILD-TYPE    124     99    180     82
D4V9, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           12            124
  CLUS_2            8             99
  CLUS_3            3            180
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED        6      1     17
  PTEN WILD-TYPE    216    183     86
D4V10, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1            6            216
  CLUS_2            1            183
  CLUS_3           17             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED       20      2      2
  PTEN WILD-TYPE    164    160    157
D4V11, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           20            164
  CLUS_2            2            160
  CLUS_3            2            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED        3      3      1     17
  PTEN WILD-TYPE     87    135    187     72
D4V12, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1            3             87
  CLUS_2            3            135
  CLUS_3            1            187
  CLUS_4           17             72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = CIC MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED        0      1      0      0
  CIC WILD-TYPE     69     42     74     54
D5V1, multiclass
[1] "Remove cluster labels:" "CIC MUTATED"           
clus
  CIC MUTATED CIC WILD-TYPE 
            1           239 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2558 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0817    TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1833    TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1838    TCGA-27-2518    TCGA-27-2519    TCGA-27-2523    TCGA-27-2524 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-4211    TCGA-32-4213    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-2572    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4934    TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED        0      1      0      0
  CIC WILD-TYPE     63     49     48     79
D5V2, multiclass
[1] "Remove cluster labels:" "CIC MUTATED"           
clus
  CIC MUTATED CIC WILD-TYPE 
            1           239 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2558 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0817    TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1833    TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1838    TCGA-27-2518    TCGA-27-2519    TCGA-27-2523    TCGA-27-2524 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-4211    TCGA-32-4213    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-2572    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4934    TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED        0      1      0      0
  CIC WILD-TYPE     77     92     45     60
D5V3, multiclass
[1] "Remove cluster labels:" "CIC MUTATED"           
clus
  CIC MUTATED CIC WILD-TYPE 
            1           274 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2558    TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2564    TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5408    TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5414    TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5858    TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-6391    TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-6698    TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-08-0386 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0740 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0781    TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0813    TCGA-14-0817    TCGA-14-0862    TCGA-14-0871    TCGA-14-1043 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-1395    TCGA-14-1450    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5954    TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-1439    TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-5135    TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-2519    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526    TCGA-27-2527 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2502    TCGA-28-2509 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-2510    TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213    TCGA-28-5214 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219    TCGA-28-5220 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-6450    TCGA-32-1970    TCGA-32-1977    TCGA-32-1979    TCGA-32-1980 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-2491    TCGA-32-2494 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-2495    TCGA-32-2615    TCGA-32-2632    TCGA-32-2634    TCGA-32-2638 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-4208    TCGA-32-4209    TCGA-32-4210    TCGA-32-4211    TCGA-32-4213 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-5651    TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-74-6578    TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6664    TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED        1      0      0
  CIC WILD-TYPE    137     61     76
D5V4, multiclass
[1] "Remove cluster labels:" "CIC MUTATED"           
clus
  CIC MUTATED CIC WILD-TYPE 
            1           274 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2558    TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2564    TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5408    TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5414    TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5858    TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-6391    TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-6698    TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-08-0386 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0740 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0781    TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0813    TCGA-14-0817    TCGA-14-0862    TCGA-14-0871    TCGA-14-1043 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-1395    TCGA-14-1450    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5954    TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-1439    TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-5135    TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-2519    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526    TCGA-27-2527 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2502    TCGA-28-2509 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-2510    TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213    TCGA-28-5214 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219    TCGA-28-5220 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-6450    TCGA-32-1970    TCGA-32-1977    TCGA-32-1979    TCGA-32-1980 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-2491    TCGA-32-2494 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-2495    TCGA-32-2615    TCGA-32-2632    TCGA-32-2634    TCGA-32-2638 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-4208    TCGA-32-4209    TCGA-32-4210    TCGA-32-4211    TCGA-32-4213 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-5651    TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-74-6578    TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6664    TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED        0    109      0
  CIC WILD-TYPE    295    372      7
D5V5, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           0           295
  CLUS_2         109           372
  CLUS_3           0             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED        1      0      4    103
  CIC WILD-TYPE    159    232     60     63
D5V6, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           1           159
  CLUS_2           0           232
  CLUS_3           4            60
  CLUS_4         103            63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED        2     55     52
  CIC WILD-TYPE    225    180    140
D5V7, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           2           225
  CLUS_2          55           180
  CLUS_3          52           140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED        0      5    104
  CIC WILD-TYPE    196    185    164
D5V8, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           0           196
  CLUS_2           5           185
  CLUS_3         104           164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED       15      4     43     46
  CIC WILD-TYPE    121    103    140     37
D5V9, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1          15           121
  CLUS_2           4           103
  CLUS_3          43           140
  CLUS_4          46            37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED       55     51      2
  CIC WILD-TYPE    167    133    101
D5V10, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1          55           167
  CLUS_2          51           133
  CLUS_3           2           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED       11     61     36
  CIC WILD-TYPE    173    101    123
D5V11, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1          11           173
  CLUS_2          61           101
  CLUS_3          36           123
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED        2     62     43      1
  CIC WILD-TYPE     88     76    145     88
D5V12, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           2            88
  CLUS_2          62            76
  CLUS_3          43           145
  CLUS_4           1            88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = PIK3CA MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED        6      6      9      5
  PIK3CA WILD-TYPE     63     37     65     49
D6V1, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1              6               63
  CLUS_2              6               37
  CLUS_3              9               65
  CLUS_4              5               49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED        8      6      8      4
  PIK3CA WILD-TYPE     55     44     40     75
D6V2, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1              8               55
  CLUS_2              6               44
  CLUS_3              8               40
  CLUS_4              4               75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED        9     11      2      6
  PIK3CA WILD-TYPE     68     82     43     54
D6V3, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1              9               68
  CLUS_2             11               82
  CLUS_3              2               43
  CLUS_4              6               54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       14      6      8
  PIK3CA WILD-TYPE    124     55     68
D6V4, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             14              124
  CLUS_2              6               55
  CLUS_3              8               68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       28     42      1
  PIK3CA WILD-TYPE    267    439      6
D6V5, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             28              267
  CLUS_2             42              439
  CLUS_3              1                6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED       21      6      3     27
  PIK3CA WILD-TYPE    139    226     61    139
D6V6, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             21              139
  CLUS_2              6              226
  CLUS_3              3               61
  CLUS_4             27              139
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       24     16     15
  PIK3CA WILD-TYPE    203    219    177
D6V7, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             24              203
  CLUS_2             16              219
  CLUS_3             15              177
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       19      8     28
  PIK3CA WILD-TYPE    177    182    240
D6V8, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             19              177
  CLUS_2              8              182
  CLUS_3             28              240
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED        5     14     13     12
  PIK3CA WILD-TYPE    131     93    170     71
D6V9, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1              5              131
  CLUS_2             14               93
  CLUS_3             13              170
  CLUS_4             12               71
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       13     16     15
  PIK3CA WILD-TYPE    209    168     88
D6V10, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             13              209
  CLUS_2             16              168
  CLUS_3             15               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       17     10     17
  PIK3CA WILD-TYPE    167    152    142
D6V11, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             17              167
  CLUS_2             10              152
  CLUS_3             17              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED        0     15     17     12
  PIK3CA WILD-TYPE     90    123    171     77
D6V12, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1              0               90
  CLUS_2             15              123
  CLUS_3             17              171
  CLUS_4             12               77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = NF1 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED       11      4      4      2
  NF1 WILD-TYPE     58     39     70     52
D7V1, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          11            58
  CLUS_2           4            39
  CLUS_3           4            70
  CLUS_4           2            52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED       14      1      1      5
  NF1 WILD-TYPE     49     49     47     74
D7V2, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          14            49
  CLUS_2           1            49
  CLUS_3           1            47
  CLUS_4           5            74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED       12      3      5      8
  NF1 WILD-TYPE     65     90     40     52
D7V3, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          12            65
  CLUS_2           3            90
  CLUS_3           5            40
  CLUS_4           8            52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED       14      7      7
  NF1 WILD-TYPE    124     54     69
D7V4, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          14           124
  CLUS_2           7            54
  CLUS_3           7            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED       33     27      2
  NF1 WILD-TYPE    262    454      5
D7V5, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          33           262
  CLUS_2          27           454
  CLUS_3           2             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED       24      2     13      7
  NF1 WILD-TYPE    136    230     51    159
D7V6, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          24           136
  CLUS_2           2           230
  CLUS_3          13            51
  CLUS_4           7           159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED       28      6     10
  NF1 WILD-TYPE    199    229    182
D7V7, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          28           199
  CLUS_2           6           229
  CLUS_3          10           182
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED       24      7     13
  NF1 WILD-TYPE    172    183    255
D7V8, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          24           172
  CLUS_2           7           183
  CLUS_3          13           255
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED        9     11      9      4
  NF1 WILD-TYPE    127     96    174     79
D7V9, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1           9           127
  CLUS_2          11            96
  CLUS_3           9           174
  CLUS_4           4            79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED       10      6     17
  NF1 WILD-TYPE    212    178     86
D7V10, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          10           212
  CLUS_2           6           178
  CLUS_3          17            86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED       21      6      6
  NF1 WILD-TYPE    163    156    153
D7V11, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          21           163
  CLUS_2           6           156
  CLUS_3           6           153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED        1      6      7     19
  NF1 WILD-TYPE     89    132    181     70
D7V12, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1           1            89
  CLUS_2           6           132
  CLUS_3           7           181
  CLUS_4          19            70
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = PIK3R1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED        7      2      8      5
  PIK3R1 WILD-TYPE     62     41     66     49
D8V1, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              7               62
  CLUS_2              2               41
  CLUS_3              8               66
  CLUS_4              5               49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED        7      6      6      3
  PIK3R1 WILD-TYPE     56     44     42     76
D8V2, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              7               56
  CLUS_2              6               44
  CLUS_3              6               42
  CLUS_4              3               76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED       12     13      4      3
  PIK3R1 WILD-TYPE     65     80     41     57
D8V3, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             12               65
  CLUS_2             13               80
  CLUS_3              4               41
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED       16      5     11
  PIK3R1 WILD-TYPE    122     56     65
D8V4, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             16              122
  CLUS_2              5               56
  CLUS_3             11               65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED       26     25      2
  PIK3R1 WILD-TYPE    269    456      5
D8V5, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             26              269
  CLUS_2             25              456
  CLUS_3              2                5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED       21      5      1     13
  PIK3R1 WILD-TYPE    139    227     63    153
D8V6, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             21              139
  CLUS_2              5              227
  CLUS_3              1               63
  CLUS_4             13              153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED       15     13      6
  PIK3R1 WILD-TYPE    212    222    186
D8V7, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             15              212
  CLUS_2             13              222
  CLUS_3              6              186
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED       11     10     13
  PIK3R1 WILD-TYPE    185    180    255
D8V8, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             11              185
  CLUS_2             10              180
  CLUS_3             13              255
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED        6      3      5      8
  PIK3R1 WILD-TYPE    130    104    178     75
D8V9, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              6              130
  CLUS_2              3              104
  CLUS_3              5              178
  CLUS_4              8               75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED       12      7      3
  PIK3R1 WILD-TYPE    210    177    100
D8V10, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             12              210
  CLUS_2              7              177
  CLUS_3              3              100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED        9      7      6
  PIK3R1 WILD-TYPE    175    155    153
D8V11, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              9              175
  CLUS_2              7              155
  CLUS_3              6              153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED        3      8      9      2
  PIK3R1 WILD-TYPE     87    130    179     87
D8V12, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              3               87
  CLUS_2              8              130
  CLUS_3              9              179
  CLUS_4              2               87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = NOTCH1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED        0      0      0      0
  NOTCH1 WILD-TYPE     69     43     74     54
D9V1, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED        0      0      0      0
  NOTCH1 WILD-TYPE     63     50     48     79
D9V2, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED        0      0      0      0
  NOTCH1 WILD-TYPE     77     93     45     60
D9V3, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED        0      0      0
  NOTCH1 WILD-TYPE    138     61     76
D9V4, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED        0     42      0
  NOTCH1 WILD-TYPE    295    439      7
D9V5, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              0              295
  CLUS_2             42              439
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED        1      9      0     32
  NOTCH1 WILD-TYPE    159    223     64    134
D9V6, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              1              159
  CLUS_2              9              223
  CLUS_3              0               64
  CLUS_4             32              134
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED        1     16     25
  NOTCH1 WILD-TYPE    226    219    167
D9V7, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              1              226
  CLUS_2             16              219
  CLUS_3             25              167
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED        0      6     36
  NOTCH1 WILD-TYPE    196    184    232
D9V8, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              0              196
  CLUS_2              6              184
  CLUS_3             36              232
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED        4      3     21     13
  NOTCH1 WILD-TYPE    132    104    162     70
D9V9, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              4              132
  CLUS_2              3              104
  CLUS_3             21              162
  CLUS_4             13               70
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED       16     23      2
  NOTCH1 WILD-TYPE    206    161    101
D9V10, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1             16              206
  CLUS_2             23              161
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED        6     13     22
  NOTCH1 WILD-TYPE    178    149    137
D9V11, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              6              178
  CLUS_2             13              149
  CLUS_3             22              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED        3     14     24      0
  NOTCH1 WILD-TYPE     87    124    164     89
D9V12, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              3               87
  CLUS_2             14              124
  CLUS_3             24              164
  CLUS_4              0               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = FUBP1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FUBP1 MUTATED        0      0      0      0
  FUBP1 WILD-TYPE     69     43     74     54
D10V1, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FUBP1 MUTATED        0      0      0      0
  FUBP1 WILD-TYPE     63     50     48     79
D10V2, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FUBP1 MUTATED        0      0      0      0
  FUBP1 WILD-TYPE     77     93     45     60
D10V3, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FUBP1 MUTATED        0      0      0
  FUBP1 WILD-TYPE    138     61     76
D10V4, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FUBP1 MUTATED        0     47      0
  FUBP1 WILD-TYPE    295    434      7
D10V5, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1             0             295
  CLUS_2            47             434
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FUBP1 MUTATED        1      0      0     46
  FUBP1 WILD-TYPE    159    232     64    120
D10V6, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1             1             159
  CLUS_2             0             232
  CLUS_3             0              64
  CLUS_4            46             120
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FUBP1 MUTATED        1     21     25
  FUBP1 WILD-TYPE    226    214    167
D10V7, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1             1             226
  CLUS_2            21             214
  CLUS_3            25             167
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FUBP1 MUTATED        0      3     44
  FUBP1 WILD-TYPE    196    187    224
D10V8, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1             0             196
  CLUS_2             3             187
  CLUS_3            44             224
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FUBP1 MUTATED        6      1     22     18
  FUBP1 WILD-TYPE    130    106    161     65
D10V9, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1             6             130
  CLUS_2             1             106
  CLUS_3            22             161
  CLUS_4            18              65
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FUBP1 MUTATED       24     22      1
  FUBP1 WILD-TYPE    198    162    102
D10V10, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1            24             198
  CLUS_2            22             162
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FUBP1 MUTATED        8     22     17
  FUBP1 WILD-TYPE    176    140    142
D10V11, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1             8             176
  CLUS_2            22             140
  CLUS_3            17             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FUBP1 MUTATED        0     23     24      0
  FUBP1 WILD-TYPE     90    115    164     89
D10V12, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1             0              90
  CLUS_2            23             115
  CLUS_3            24             164
  CLUS_4             0              89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = RB1 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED       11      2      3      2
  RB1 WILD-TYPE     58     41     71     52
D11V1, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          11            58
  CLUS_2           2            41
  CLUS_3           3            71
  CLUS_4           2            52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED        5      2      0     11
  RB1 WILD-TYPE     58     48     48     68
D11V2, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           5            58
  CLUS_2           2            48
  CLUS_3           0            48
  CLUS_4          11            68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED       11      4      3      6
  RB1 WILD-TYPE     66     89     42     54
D11V3, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          11            66
  CLUS_2           4            89
  CLUS_3           3            42
  CLUS_4           6            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED       12      6      6
  RB1 WILD-TYPE    126     55     70
D11V4, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          12           126
  CLUS_2           6            55
  CLUS_3           6            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED       27      2      1
  RB1 WILD-TYPE    268    479      6
D11V5, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          27           268
  CLUS_2           2           479
  CLUS_3           1             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED       12      0      1      1
  RB1 WILD-TYPE    148    232     63    165
D11V6, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          12           148
  CLUS_2           0           232
  CLUS_3           1            63
  CLUS_4           1           165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED       14      1      1
  RB1 WILD-TYPE    213    234    191
D11V7, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          14           213
  CLUS_2           1           234
  CLUS_3           1           191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED       13      1      2
  RB1 WILD-TYPE    183    189    266
D11V8, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          13           183
  CLUS_2           1           189
  CLUS_3           2           266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED        3      1      1      1
  RB1 WILD-TYPE    133    106    182     82
D11V9, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           3           133
  CLUS_2           1           106
  CLUS_3           1           182
  CLUS_4           1            82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED        1      1      4
  RB1 WILD-TYPE    221    183     99
D11V10, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           1           221
  CLUS_2           1           183
  CLUS_3           4            99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED        3      1      2
  RB1 WILD-TYPE    181    161    157
D11V11, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           3           181
  CLUS_2           1           161
  CLUS_3           2           157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED        0      1      2      3
  RB1 WILD-TYPE     90    137    186     86
D11V12, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           0            90
  CLUS_2           1           137
  CLUS_3           2           186
  CLUS_4           3            86
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = IDH2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        0      0      0      0
  IDH2 WILD-TYPE     69     43     74     54
D12V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        0      0      0      0
  IDH2 WILD-TYPE     63     50     48     79
D12V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        0      0      0      0
  IDH2 WILD-TYPE     77     93     45     60
D12V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        0      0      0
  IDH2 WILD-TYPE    138     61     76
D12V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        0     20      0
  IDH2 WILD-TYPE    295    461      7
D12V5, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            0            295
  CLUS_2           20            461
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        0      3      4     13
  IDH2 WILD-TYPE    160    229     60    153
D12V6, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            0            160
  CLUS_2            3            229
  CLUS_3            4             60
  CLUS_4           13            153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        0      6     14
  IDH2 WILD-TYPE    227    229    178
D12V7, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            0            227
  CLUS_2            6            229
  CLUS_3           14            178
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        0      1     19
  IDH2 WILD-TYPE    196    189    249
D12V8, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            1            189
  CLUS_3           19            249
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        3      0     12      5
  IDH2 WILD-TYPE    133    107    171     78
D12V9, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            3            133
  CLUS_2            0            107
  CLUS_3           12            171
  CLUS_4            5             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        5     15      0
  IDH2 WILD-TYPE    217    169    103
D12V10, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            5            217
  CLUS_2           15            169
  CLUS_3            0            103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        1      8     11
  IDH2 WILD-TYPE    183    154    148
D12V11, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            1            183
  CLUS_2            8            154
  CLUS_3           11            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        2      6     12      0
  IDH2 WILD-TYPE     88    132    176     89
D12V12, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            2             88
  CLUS_2            6            132
  CLUS_3           12            176
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = TCF12 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF12 MUTATED        1      0      1      1
  TCF12 WILD-TYPE     68     43     73     53
D13V1, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             1              68
  CLUS_2             0              43
  CLUS_3             1              73
  CLUS_4             1              53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF12 MUTATED        1      1      1      0
  TCF12 WILD-TYPE     62     49     47     79
D13V2, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             1              62
  CLUS_2             1              49
  CLUS_3             1              47
  CLUS_4             0              79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF12 MUTATED        2      2      0      0
  TCF12 WILD-TYPE     75     91     45     60
D13V3, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             2              75
  CLUS_2             2              91
  CLUS_3             0              45
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF12 MUTATED        2      2      0
  TCF12 WILD-TYPE    136     59     76
D13V4, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             2             136
  CLUS_2             2              59
  CLUS_3             0              76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF12 MUTATED        3     15      0
  TCF12 WILD-TYPE    292    466      7
D13V5, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             3             292
  CLUS_2            15             466
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF12 MUTATED        3      7      1      6
  TCF12 WILD-TYPE    157    225     63    160
D13V6, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             3             157
  CLUS_2             7             225
  CLUS_3             1              63
  CLUS_4             6             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF12 MUTATED        2      9      5
  TCF12 WILD-TYPE    225    226    187
D13V7, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             2             225
  CLUS_2             9             226
  CLUS_3             5             187
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF12 MUTATED        2      6      8
  TCF12 WILD-TYPE    194    184    260
D13V8, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             6             184
  CLUS_3             8             260
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF12 MUTATED        4      2      5      4
  TCF12 WILD-TYPE    132    105    178     79
D13V9, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             4             132
  CLUS_2             2             105
  CLUS_3             5             178
  CLUS_4             4              79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF12 MUTATED        8      6      1
  TCF12 WILD-TYPE    214    178    102
D13V10, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             8             214
  CLUS_2             6             178
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF12 MUTATED        5      5      5
  TCF12 WILD-TYPE    179    157    154
D13V11, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             5             179
  CLUS_2             5             157
  CLUS_3             5             154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF12 MUTATED        4      3      7      1
  TCF12 WILD-TYPE     86    135    181     88
D13V12, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             4              86
  CLUS_2             3             135
  CLUS_3             7             181
  CLUS_4             1              88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = STK19 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK19 MUTATED        0      1      0      0
  STK19 WILD-TYPE     69     42     74     54
D14V1, multiclass
[1] "Remove cluster labels:" "STK19 MUTATED"         
clus
  STK19 MUTATED STK19 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK19 MUTATED        0      0      1      0
  STK19 WILD-TYPE     63     50     47     79
D14V2, multiclass
[1] "Remove cluster labels:" "STK19 MUTATED"         
clus
  STK19 MUTATED STK19 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK19 MUTATED        0      1      0      0
  STK19 WILD-TYPE     77     92     45     60
D14V3, multiclass
[1] "Remove cluster labels:" "STK19 MUTATED"         
clus
  STK19 MUTATED STK19 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-1597      TCGA-12-3649 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK19 MUTATED        1      0      0
  STK19 WILD-TYPE    137     61     76
D14V4, multiclass
[1] "Remove cluster labels:" "STK19 MUTATED"         
clus
  STK19 MUTATED STK19 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-1597      TCGA-12-3649 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK19 MUTATED        3      8      0
  STK19 WILD-TYPE    292    473      7
D14V5, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             3             292
  CLUS_2             8             473
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK19 MUTATED        3      4      2      1
  STK19 WILD-TYPE    157    228     62    165
D14V6, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             3             157
  CLUS_2             4             228
  CLUS_3             2              62
  CLUS_4             1             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK19 MUTATED        4      2      5
  STK19 WILD-TYPE    223    233    187
D14V7, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             4             223
  CLUS_2             2             233
  CLUS_3             5             187
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK19 MUTATED        3      4      4
  STK19 WILD-TYPE    193    186    264
D14V8, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             3             193
  CLUS_2             4             186
  CLUS_3             4             264
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK19 MUTATED        1      4      5      0
  STK19 WILD-TYPE    135    103    178     83
D14V9, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             1             135
  CLUS_2             4             103
  CLUS_3             5             178
  CLUS_4             0              83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK19 MUTATED        3      4      3
  STK19 WILD-TYPE    219    180    100
D14V10, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             3             219
  CLUS_2             4             180
  CLUS_3             3             100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK19 MUTATED        3      4      3
  STK19 WILD-TYPE    181    158    156
D14V11, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             3             181
  CLUS_2             4             158
  CLUS_3             3             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK19 MUTATED        1      2      5      2
  STK19 WILD-TYPE     89    136    183     87
D14V12, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             1              89
  CLUS_2             2             136
  CLUS_3             5             183
  CLUS_4             2              87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = ARID1A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED        1      0      0      0
  ARID1A WILD-TYPE     68     43     74     54
D15V1, multiclass
[1] "Remove cluster labels:" "ARID1A MUTATED"        
clus
  ARID1A MUTATED ARID1A WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-3393       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED        0      0      0      1
  ARID1A WILD-TYPE     63     50     48     78
D15V2, multiclass
[1] "Remove cluster labels:" "ARID1A MUTATED"        
clus
  ARID1A MUTATED ARID1A WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-3393       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED        1      0      0      1
  ARID1A WILD-TYPE     76     93     45     59
D15V3, multiclass
[1] "Remove cluster labels:" "ARID1A MUTATED"        
clus
  ARID1A MUTATED ARID1A WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-4097       TCGA-41-5651 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-87-5896 
"ARID1A WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED        1      1      0
  ARID1A WILD-TYPE    137     60     76
D15V4, multiclass
[1] "Remove cluster labels:" "ARID1A MUTATED"        
clus
  ARID1A MUTATED ARID1A WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-4097       TCGA-41-5651 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-87-5896 
"ARID1A WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED        2     19      0
  ARID1A WILD-TYPE    293    462      7
D15V5, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              2              293
  CLUS_2             19              462
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED        2      6      1     12
  ARID1A WILD-TYPE    158    226     63    154
D15V6, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              2              158
  CLUS_2              6              226
  CLUS_3              1               63
  CLUS_4             12              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED        2     12      7
  ARID1A WILD-TYPE    225    223    185
D15V7, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              2              225
  CLUS_2             12              223
  CLUS_3              7              185
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED        1      5     15
  ARID1A WILD-TYPE    195    185    253
D15V8, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              1              195
  CLUS_2              5              185
  CLUS_3             15              253
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED        5      2      7      6
  ARID1A WILD-TYPE    131    105    176     77
D15V9, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              5              131
  CLUS_2              2              105
  CLUS_3              7              176
  CLUS_4              6               77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED       10      8      2
  ARID1A WILD-TYPE    212    176    101
D15V10, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1             10              212
  CLUS_2              8              176
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED        3     10      7
  ARID1A WILD-TYPE    181    152    152
D15V11, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              3              181
  CLUS_2             10              152
  CLUS_3              7              152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED        1     11      7      1
  ARID1A WILD-TYPE     89    127    181     88
D15V12, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              1               89
  CLUS_2             11              127
  CLUS_3              7              181
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = NIPBL MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIPBL MUTATED        1      1      0      0
  NIPBL WILD-TYPE     68     42     74     54
D16V1, multiclass
[1] "Remove cluster labels:" "NIPBL MUTATED"         
clus
  NIPBL MUTATED NIPBL WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0124 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0126      TCGA-06-0128      TCGA-06-0129      TCGA-06-0130 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0132      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0152 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0154      TCGA-06-0155      TCGA-06-0157      TCGA-06-0158 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0166      TCGA-06-0167      TCGA-06-0168      TCGA-06-0169 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5859      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0781 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0871      TCGA-14-1456 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5954      TCGA-19-5955 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-2502 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-2509      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIPBL MUTATED        1      0      0      1
  NIPBL WILD-TYPE     62     50     48     78
D16V2, multiclass
[1] "Remove cluster labels:" "NIPBL MUTATED"         
clus
  NIPBL MUTATED NIPBL WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0124 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0126      TCGA-06-0128      TCGA-06-0129      TCGA-06-0130 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0132      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0152 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0154      TCGA-06-0155      TCGA-06-0157      TCGA-06-0158 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0166      TCGA-06-0167      TCGA-06-0168      TCGA-06-0169 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5859      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0781 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0871      TCGA-14-1456 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5954      TCGA-19-5955 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-2502 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-2509      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIPBL MUTATED        2      0      0      0
  NIPBL WILD-TYPE     75     93     45     60
D16V3, multiclass
[1] "Remove cluster labels:" "NIPBL MUTATED"         
clus
  NIPBL MUTATED NIPBL WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0151 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0168      TCGA-06-0169 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5859      TCGA-06-6388      TCGA-06-6389 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-06-6693      TCGA-06-6694 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-6695      TCGA-06-6697      TCGA-06-6698      TCGA-06-6699 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-6700      TCGA-06-6701      TCGA-08-0386      TCGA-12-0616 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0740      TCGA-14-0781      TCGA-14-0786 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0787      TCGA-14-0789      TCGA-14-0790      TCGA-14-0813 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0817      TCGA-14-0862      TCGA-14-0871      TCGA-14-1043 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-1395      TCGA-14-1450      TCGA-14-1456      TCGA-14-1823 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-1825      TCGA-14-1829      TCGA-14-2554      TCGA-14-3476 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-4157      TCGA-15-0742      TCGA-15-1444      TCGA-16-0846 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-16-0861      TCGA-16-1045      TCGA-16-1048      TCGA-19-1390 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-1790      TCGA-19-2619      TCGA-19-2620      TCGA-19-2623 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-2624      TCGA-19-2625      TCGA-19-2629      TCGA-19-2631 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-4068      TCGA-19-5947      TCGA-19-5950      TCGA-19-5951 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5952      TCGA-19-5953      TCGA-19-5954      TCGA-19-5955 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-6174      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-87-5896 
"NIPBL WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NIPBL MUTATED        1      0      1
  NIPBL WILD-TYPE    137     61     75
D16V4, multiclass
[1] "Remove cluster labels:" "NIPBL MUTATED"         
clus
  NIPBL MUTATED NIPBL WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0151 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0168      TCGA-06-0169 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5859      TCGA-06-6388      TCGA-06-6389 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-06-6693      TCGA-06-6694 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-6695      TCGA-06-6697      TCGA-06-6698      TCGA-06-6699 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-6700      TCGA-06-6701      TCGA-08-0386      TCGA-12-0616 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0740      TCGA-14-0781      TCGA-14-0786 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0787      TCGA-14-0789      TCGA-14-0790      TCGA-14-0813 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0817      TCGA-14-0862      TCGA-14-0871      TCGA-14-1043 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-1395      TCGA-14-1450      TCGA-14-1456      TCGA-14-1823 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-1825      TCGA-14-1829      TCGA-14-2554      TCGA-14-3476 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-4157      TCGA-15-0742      TCGA-15-1444      TCGA-16-0846 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-16-0861      TCGA-16-1045      TCGA-16-1048      TCGA-19-1390 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-1790      TCGA-19-2619      TCGA-19-2620      TCGA-19-2623 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-2624      TCGA-19-2625      TCGA-19-2629      TCGA-19-2631 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-4068      TCGA-19-5947      TCGA-19-5950      TCGA-19-5951 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5952      TCGA-19-5953      TCGA-19-5954      TCGA-19-5955 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-6174      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-87-5896 
"NIPBL WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NIPBL MUTATED        2     18      0
  NIPBL WILD-TYPE    293    463      7
D16V5, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             2             293
  CLUS_2            18             463
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIPBL MUTATED        3      2      0     14
  NIPBL WILD-TYPE    157    230     64    152
D16V6, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             3             157
  CLUS_2             2             230
  CLUS_3             0              64
  CLUS_4            14             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NIPBL MUTATED        3     12      4
  NIPBL WILD-TYPE    224    223    188
D16V7, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             3             224
  CLUS_2            12             223
  CLUS_3             4             188
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NIPBL MUTATED        2      4     13
  NIPBL WILD-TYPE    194    186    255
D16V8, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             2             194
  CLUS_2             4             186
  CLUS_3            13             255
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIPBL MUTATED        5      4      4      5
  NIPBL WILD-TYPE    131    103    179     78
D16V9, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             5             131
  CLUS_2             4             103
  CLUS_3             4             179
  CLUS_4             5              78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NIPBL MUTATED       12      4      2
  NIPBL WILD-TYPE    210    180    101
D16V10, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1            12             210
  CLUS_2             4             180
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NIPBL MUTATED        3     12      3
  NIPBL WILD-TYPE    181    150    156
D16V11, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             3             181
  CLUS_2            12             150
  CLUS_3             3             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIPBL MUTATED        3     10      4      1
  NIPBL WILD-TYPE     87    128    184     88
D16V12, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             3              87
  CLUS_2            10             128
  CLUS_3             4             184
  CLUS_4             1              88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = SMARCA4 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        1      0      0      0
  SMARCA4 WILD-TYPE     68     43     74     54
D17V1, multiclass
[1] "Remove cluster labels:" "SMARCA4 MUTATED"       
clus
  SMARCA4 MUTATED SMARCA4 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1825 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-1829        TCGA-14-2554        TCGA-14-3476        TCGA-14-4157 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-15-0742        TCGA-15-1444        TCGA-16-0846        TCGA-16-0861 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-16-1045        TCGA-16-1048        TCGA-19-1390        TCGA-19-1790 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2619        TCGA-19-2620        TCGA-19-2623        TCGA-19-2624 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2625        TCGA-19-2629        TCGA-19-2631        TCGA-19-4068 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5139        TCGA-27-1830        TCGA-27-1831        TCGA-27-1832 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1833        TCGA-27-1834        TCGA-27-1835        TCGA-27-1836 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1837        TCGA-27-1838        TCGA-27-2518        TCGA-27-2519 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2521        TCGA-27-2523        TCGA-27-2524        TCGA-27-2526 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2527        TCGA-27-2528        TCGA-28-1747        TCGA-28-1753 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-2501        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5208 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        1      0      0      0
  SMARCA4 WILD-TYPE     62     50     48     79
D17V2, multiclass
[1] "Remove cluster labels:" "SMARCA4 MUTATED"       
clus
  SMARCA4 MUTATED SMARCA4 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1825 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-1829        TCGA-14-2554        TCGA-14-3476        TCGA-14-4157 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-15-0742        TCGA-15-1444        TCGA-16-0846        TCGA-16-0861 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-16-1045        TCGA-16-1048        TCGA-19-1390        TCGA-19-1790 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2619        TCGA-19-2620        TCGA-19-2623        TCGA-19-2624 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2625        TCGA-19-2629        TCGA-19-2631        TCGA-19-4068 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5139        TCGA-27-1830        TCGA-27-1831        TCGA-27-1832 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1833        TCGA-27-1834        TCGA-27-1835        TCGA-27-1836 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1837        TCGA-27-1838        TCGA-27-2518        TCGA-27-2519 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2521        TCGA-27-2523        TCGA-27-2524        TCGA-27-2526 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2527        TCGA-27-2528        TCGA-28-1747        TCGA-28-1753 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-2501        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5208 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        0      1      0      0
  SMARCA4 WILD-TYPE     77     92     45     60
D17V3, multiclass
[1] "Remove cluster labels:" "SMARCA4 MUTATED"       
clus
  SMARCA4 MUTATED SMARCA4 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5953 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5139        TCGA-26-6173        TCGA-26-6174        TCGA-27-1830 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1831        TCGA-27-1832        TCGA-27-1833        TCGA-27-1834 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1835        TCGA-27-1836        TCGA-27-1837        TCGA-27-1838 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2518        TCGA-27-2519        TCGA-27-2521        TCGA-27-2523 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2524        TCGA-27-2526        TCGA-27-2527        TCGA-27-2528 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2502        TCGA-28-2509 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-2510        TCGA-28-2513        TCGA-28-2514        TCGA-28-5204 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED        1      0      0
  SMARCA4 WILD-TYPE    137     61     76
D17V4, multiclass
[1] "Remove cluster labels:" "SMARCA4 MUTATED"       
clus
  SMARCA4 MUTATED SMARCA4 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5953 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5139        TCGA-26-6173        TCGA-26-6174        TCGA-27-1830 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1831        TCGA-27-1832        TCGA-27-1833        TCGA-27-1834 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1835        TCGA-27-1836        TCGA-27-1837        TCGA-27-1838 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2518        TCGA-27-2519        TCGA-27-2521        TCGA-27-2523 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2524        TCGA-27-2526        TCGA-27-2527        TCGA-27-2528 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2502        TCGA-28-2509 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-2510        TCGA-28-2513        TCGA-28-2514        TCGA-28-5204 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED        2     25      0
  SMARCA4 WILD-TYPE    293    456      7
D17V5, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               2               293
  CLUS_2              25               456
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        3     17      0      7
  SMARCA4 WILD-TYPE    157    215     64    159
D17V6, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               3               157
  CLUS_2              17               215
  CLUS_3               0                64
  CLUS_4               7               159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED        3     17      7
  SMARCA4 WILD-TYPE    224    218    185
D17V7, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               3               224
  CLUS_2              17               218
  CLUS_3               7               185
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED        2     13     12
  SMARCA4 WILD-TYPE    194    177    256
D17V8, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               2               194
  CLUS_2              13               177
  CLUS_3              12               256
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        8      2      9      6
  SMARCA4 WILD-TYPE    128    105    174     77
D17V9, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               8               128
  CLUS_2               2               105
  CLUS_3               9               174
  CLUS_4               6                77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED       14      9      2
  SMARCA4 WILD-TYPE    208    175    101
D17V10, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1              14               208
  CLUS_2               9               175
  CLUS_3               2               101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED        8      9      8
  SMARCA4 WILD-TYPE    176    153    151
D17V11, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               8               176
  CLUS_2               9               153
  CLUS_3               8               151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        7      6     11      1
  SMARCA4 WILD-TYPE     83    132    177     88
D17V12, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               7                83
  CLUS_2               6               132
  CLUS_3              11               177
  CLUS_4               1                88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = CREBZF MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBZF MUTATED        1      0      0      1
  CREBZF WILD-TYPE     68     43     74     53
D18V1, multiclass
[1] "Remove cluster labels:" "CREBZF MUTATED"        
clus
  CREBZF MUTATED CREBZF WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0130 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0132       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0152 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0154       TCGA-06-0155       TCGA-06-0157       TCGA-06-0158 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4209 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBZF MUTATED        0      2      0      0
  CREBZF WILD-TYPE     63     48     48     79
D18V2, multiclass
[1] "Remove cluster labels:" "CREBZF MUTATED"        
clus
  CREBZF MUTATED CREBZF WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0130 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0132       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0152 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0154       TCGA-06-0155       TCGA-06-0157       TCGA-06-0158 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4209 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBZF MUTATED        0      2      0      0
  CREBZF WILD-TYPE     77     91     45     60
D18V3, multiclass
[1] "Remove cluster labels:" "CREBZF MUTATED"        
clus
  CREBZF MUTATED CREBZF WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0151 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0168       TCGA-06-0169 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-87-5896 
"CREBZF WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBZF MUTATED        2      0      0
  CREBZF WILD-TYPE    136     61     76
D18V4, multiclass
[1] "Remove cluster labels:" "CREBZF MUTATED"        
clus
  CREBZF MUTATED CREBZF WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0151 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0168       TCGA-06-0169 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-87-5896 
"CREBZF WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBZF MUTATED        0      9      0
  CREBZF WILD-TYPE    295    472      7
D18V5, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              0              295
  CLUS_2              9              472
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBZF MUTATED        0      0      0      7
  CREBZF WILD-TYPE    160    232     64    159
D18V6, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              0              160
  CLUS_2              0              232
  CLUS_3              0               64
  CLUS_4              7              159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBZF MUTATED        1      1      6
  CREBZF WILD-TYPE    226    234    186
D18V7, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              1              226
  CLUS_2              1              234
  CLUS_3              6              186
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBZF MUTATED        0      2      6
  CREBZF WILD-TYPE    196    188    262
D18V8, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              0              196
  CLUS_2              2              188
  CLUS_3              6              262
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBZF MUTATED        0      1      5      1
  CREBZF WILD-TYPE    136    106    178     82
D18V9, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              0              136
  CLUS_2              1              106
  CLUS_3              5              178
  CLUS_4              1               82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBZF MUTATED        0      6      1
  CREBZF WILD-TYPE    222    178    102
D18V10, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              0              222
  CLUS_2              6              178
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBZF MUTATED        1      1      5
  CREBZF WILD-TYPE    183    161    154
D18V11, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              1              183
  CLUS_2              1              161
  CLUS_3              5              154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBZF MUTATED        0      0      6      1
  CREBZF WILD-TYPE     90    138    182     88
D18V12, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              0               90
  CLUS_2              0              138
  CLUS_3              6              182
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = EMG1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMG1 MUTATED        0      0      0      0
  EMG1 WILD-TYPE     69     43     74     54
D19V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMG1 MUTATED        0      0      0      0
  EMG1 WILD-TYPE     63     50     48     79
D19V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMG1 MUTATED        0      0      0      0
  EMG1 WILD-TYPE     77     93     45     60
D19V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EMG1 MUTATED        0      0      0
  EMG1 WILD-TYPE    138     61     76
D19V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EMG1 MUTATED        0      7      0
  EMG1 WILD-TYPE    295    474      7
D19V5, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            0            295
  CLUS_2            7            474
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMG1 MUTATED        0      3      0      4
  EMG1 WILD-TYPE    160    229     64    162
D19V6, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            0            160
  CLUS_2            3            229
  CLUS_3            0             64
  CLUS_4            4            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EMG1 MUTATED        0      5      2
  EMG1 WILD-TYPE    227    230    190
D19V7, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            0            227
  CLUS_2            5            230
  CLUS_3            2            190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EMG1 MUTATED        0      1      6
  EMG1 WILD-TYPE    196    189    262
D19V8, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            1            189
  CLUS_3            6            262
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMG1 MUTATED        1      0      3      3
  EMG1 WILD-TYPE    135    107    180     80
D19V9, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            1            135
  CLUS_2            0            107
  CLUS_3            3            180
  CLUS_4            3             80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EMG1 MUTATED        5      2      0
  EMG1 WILD-TYPE    217    182    103
D19V10, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            5            217
  CLUS_2            2            182
  CLUS_3            0            103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EMG1 MUTATED        2      3      2
  EMG1 WILD-TYPE    182    159    157
D19V11, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            2            182
  CLUS_2            3            159
  CLUS_3            2            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMG1 MUTATED        1      4      2      0
  EMG1 WILD-TYPE     89    134    186     89
D19V12, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            1             89
  CLUS_2            4            134
  CLUS_3            2            186
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = ZNF709 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF709 MUTATED        1      1      0      0
  ZNF709 WILD-TYPE     68     42     74     54
D20V1, multiclass
[1] "Remove cluster labels:" "ZNF709 MUTATED"        
clus
  ZNF709 MUTATED ZNF709 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5215       TCGA-28-5216 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF709 MUTATED        2      0      0      0
  ZNF709 WILD-TYPE     61     50     48     79
D20V2, multiclass
[1] "Remove cluster labels:" "ZNF709 MUTATED"        
clus
  ZNF709 MUTATED ZNF709 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5215       TCGA-28-5216 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF709 MUTATED        2      0      0      1
  ZNF709 WILD-TYPE     75     93     45     59
D20V3, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              2               75
  CLUS_2              0               93
  CLUS_3              0               45
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF709 MUTATED        1      1      1
  ZNF709 WILD-TYPE    137     60     75
D20V4, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              1              137
  CLUS_2              1               60
  CLUS_3              1               75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF709 MUTATED        3      4      0
  ZNF709 WILD-TYPE    292    477      7
D20V5, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              3              292
  CLUS_2              4              477
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF709 MUTATED        2      2      0      2
  ZNF709 WILD-TYPE    158    230     64    164
D20V6, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              2              230
  CLUS_3              0               64
  CLUS_4              2              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF709 MUTATED        1      2      2
  ZNF709 WILD-TYPE    226    233    190
D20V7, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              1              226
  CLUS_2              2              233
  CLUS_3              2              190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF709 MUTATED        1      2      2
  ZNF709 WILD-TYPE    195    188    266
D20V8, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              2              188
  CLUS_3              2              266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF709 MUTATED        1      1      2      0
  ZNF709 WILD-TYPE    135    106    181     83
D20V9, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              1              135
  CLUS_2              1              106
  CLUS_3              2              181
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF709 MUTATED        1      2      1
  ZNF709 WILD-TYPE    221    182    102
D20V10, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              1              221
  CLUS_2              2              182
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF709 MUTATED        3      0      1
  ZNF709 WILD-TYPE    181    162    158
D20V11, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              3              181
  CLUS_2              0              162
  CLUS_3              1              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF709 MUTATED        1      1      2      0
  ZNF709 WILD-TYPE     89    137    186     89
D20V12, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              1               89
  CLUS_2              1              137
  CLUS_3              2              186
  CLUS_4              0               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = RPL5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL5 MUTATED        1      2      3      0
  RPL5 WILD-TYPE     68     41     71     54
D21V1, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            1             68
  CLUS_2            2             41
  CLUS_3            3             71
  CLUS_4            0             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL5 MUTATED        3      0      1      2
  RPL5 WILD-TYPE     60     50     47     77
D21V2, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            3             60
  CLUS_2            0             50
  CLUS_3            1             47
  CLUS_4            2             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL5 MUTATED        1      3      1      2
  RPL5 WILD-TYPE     76     90     44     58
D21V3, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            1             76
  CLUS_2            3             90
  CLUS_3            1             44
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL5 MUTATED        3      3      1
  RPL5 WILD-TYPE    135     58     75
D21V4, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            3            135
  CLUS_2            3             58
  CLUS_3            1             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL5 MUTATED        6      4      0
  RPL5 WILD-TYPE    289    477      7
D21V5, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            6            289
  CLUS_2            4            477
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL5 MUTATED        5      0      0      1
  RPL5 WILD-TYPE    155    232     64    165
D21V6, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            5            155
  CLUS_2            0            232
  CLUS_3            0             64
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL5 MUTATED        5      0      1
  RPL5 WILD-TYPE    222    235    191
D21V7, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            5            222
  CLUS_2            0            235
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL5 MUTATED        4      1      1
  RPL5 WILD-TYPE    192    189    267
D21V8, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            4            192
  CLUS_2            1            189
  CLUS_3            1            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL5 MUTATED        0      2      0      1
  RPL5 WILD-TYPE    136    105    183     82
D21V9, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            0            136
  CLUS_2            2            105
  CLUS_3            0            183
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL5 MUTATED        0      1      2
  RPL5 WILD-TYPE    222    183    101
D21V10, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            0            222
  CLUS_2            1            183
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL5 MUTATED        1      1      1
  RPL5 WILD-TYPE    183    161    158
D21V11, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            1            183
  CLUS_2            1            161
  CLUS_3            1            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL5 MUTATED        0      0      2      1
  RPL5 WILD-TYPE     90    138    186     88
D21V12, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            0            138
  CLUS_3            2            186
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = STAG2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAG2 MUTATED        4      3      1      2
  STAG2 WILD-TYPE     65     40     73     52
D22V1, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             4              65
  CLUS_2             3              40
  CLUS_3             1              73
  CLUS_4             2              52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAG2 MUTATED        2      1      3      4
  STAG2 WILD-TYPE     61     49     45     75
D22V2, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             2              61
  CLUS_2             1              49
  CLUS_3             3              45
  CLUS_4             4              75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAG2 MUTATED        4      5      2      1
  STAG2 WILD-TYPE     73     88     43     59
D22V3, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             4              73
  CLUS_2             5              88
  CLUS_3             2              43
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAG2 MUTATED        5      2      5
  STAG2 WILD-TYPE    133     59     71
D22V4, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             5             133
  CLUS_2             2              59
  CLUS_3             5              71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAG2 MUTATED       13      2      1
  STAG2 WILD-TYPE    282    479      6
D22V5, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1            13             282
  CLUS_2             2             479
  CLUS_3             1               6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAG2 MUTATED        8      1      0      0
  STAG2 WILD-TYPE    152    231     64    166
D22V6, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             8             152
  CLUS_2             1             231
  CLUS_3             0              64
  CLUS_4             0             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAG2 MUTATED       10      0      1
  STAG2 WILD-TYPE    217    235    191
D22V7, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1            10             217
  CLUS_2             0             235
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAG2 MUTATED        9      1      1
  STAG2 WILD-TYPE    187    189    267
D22V8, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             9             187
  CLUS_2             1             189
  CLUS_3             1             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAG2 MUTATED        1      2      1      0
  STAG2 WILD-TYPE    135    105    182     83
D22V9, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             1             135
  CLUS_2             2             105
  CLUS_3             1             182
  CLUS_4             0              83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAG2 MUTATED        0      1      3
  STAG2 WILD-TYPE    222    183    100
D22V10, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             0             222
  CLUS_2             1             183
  CLUS_3             3             100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAG2 MUTATED        2      0      2
  STAG2 WILD-TYPE    182    162    157
D22V11, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             2             182
  CLUS_2             0             162
  CLUS_3             2             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAG2 MUTATED        0      0      2      2
  STAG2 WILD-TYPE     90    138    186     87
D22V12, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             0             138
  CLUS_3             2             186
  CLUS_4             2              87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = IRS4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        1      2      0      0
  IRS4 WILD-TYPE     68     41     74     54
D23V1, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            1             68
  CLUS_2            2             41
  CLUS_3            0             74
  CLUS_4            0             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        1      1      0      1
  IRS4 WILD-TYPE     62     49     48     78
D23V2, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            1             62
  CLUS_2            1             49
  CLUS_3            0             48
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        3      0      0      0
  IRS4 WILD-TYPE     74     93     45     60
D23V3, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            3             74
  CLUS_2            0             93
  CLUS_3            0             45
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED        0      1      2
  IRS4 WILD-TYPE    138     60     74
D23V4, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            0            138
  CLUS_2            1             60
  CLUS_3            2             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED        3      7      0
  IRS4 WILD-TYPE    292    474      7
D23V5, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            3            292
  CLUS_2            7            474
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        3      3      1      1
  IRS4 WILD-TYPE    157    229     63    165
D23V6, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            3            157
  CLUS_2            3            229
  CLUS_3            1             63
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED        5      3      2
  IRS4 WILD-TYPE    222    232    190
D23V7, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            5            222
  CLUS_2            3            232
  CLUS_3            2            190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED        3      5      2
  IRS4 WILD-TYPE    193    185    266
D23V8, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            3            193
  CLUS_2            5            185
  CLUS_3            2            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        1      3      3      0
  IRS4 WILD-TYPE    135    104    180     83
D23V9, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            1            135
  CLUS_2            3            104
  CLUS_3            3            180
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED        2      3      2
  IRS4 WILD-TYPE    220    181    101
D23V10, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            2            220
  CLUS_2            3            181
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED        1      2      4
  IRS4 WILD-TYPE    183    160    155
D23V11, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            1            183
  CLUS_2            2            160
  CLUS_3            4            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        1      2      3      1
  IRS4 WILD-TYPE     89    136    185     88
D23V12, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            1             89
  CLUS_2            2            136
  CLUS_3            3            185
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = REN MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REN MUTATED        0      0      2      1
  REN WILD-TYPE     69     43     72     53
D24V1, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           0            69
  CLUS_2           0            43
  CLUS_3           2            72
  CLUS_4           1            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REN MUTATED        0      0      1      2
  REN WILD-TYPE     63     50     47     77
D24V2, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           0            63
  CLUS_2           0            50
  CLUS_3           1            47
  CLUS_4           2            77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REN MUTATED        1      1      3      0
  REN WILD-TYPE     76     92     42     60
D24V3, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           1            76
  CLUS_2           1            92
  CLUS_3           3            42
  CLUS_4           0            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  REN MUTATED        4      0      1
  REN WILD-TYPE    134     61     75
D24V4, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           4           134
  CLUS_2           0            61
  CLUS_3           1            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  REN MUTATED        7      0      0
  REN WILD-TYPE    288    481      7
D24V5, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           7           288
  CLUS_2           0           481
  CLUS_3           0             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REN MUTATED        5      0      0      0
  REN WILD-TYPE    155    232     64    166
D24V6, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           5           155
  CLUS_2           0           232
  CLUS_3           0            64
  CLUS_4           0           166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  REN MUTATED        1      0      2
  REN WILD-TYPE    226    235    190
D24V7, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           1           226
  CLUS_2           0           235
  CLUS_3           2           190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  REN MUTATED        1      0      2
  REN WILD-TYPE    195    190    266
D24V8, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           1           195
  CLUS_2           0           190
  CLUS_3           2           266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REN MUTATED        0      1      1      0
  REN WILD-TYPE    136    106    182     83
D24V9, multiclass
[1] "Remove cluster labels:" "REN MUTATED"           
clus
  REN MUTATED REN WILD-TYPE 
            2           507 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A75L    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7015 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7294    TCGA-DU-7298 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302    TCGA-DU-7304 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161    TCGA-DU-8162 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166    TCGA-DU-8167 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TG    TCGA-DU-A7TJ    TCGA-E1-5302 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD    TCGA-E1-A7YE 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK    TCGA-E1-A7YL 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ    TCGA-E1-A7YS 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-5965 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-6692 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1    TCGA-FG-A6J3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711    TCGA-FG-A713 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467    TCGA-HT-7468 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563    TCGA-HT-8564 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7    TCGA-HT-A5R9 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614    TCGA-HT-A615 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74K    TCGA-HT-A74L 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489    TCGA-HW-7490 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-7491    TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-8322    TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-IK-7675    TCGA-IK-8125    TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5F6    TCGA-P5-A72U    TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A736 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6U9    TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WN    TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7IS    TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7QY    TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7R4    TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A7C3    TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84B    TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84I    TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84Q    TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RG    TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RM    TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RR    TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RV    TCGA-TQ-A7RW 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-WY-A858    TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-WY-A85D    TCGA-WY-A85E 
"REN WILD-TYPE" "REN WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  REN MUTATED        0      1      1
  REN WILD-TYPE    222    183    102
D24V10, multiclass
[1] "Remove cluster labels:" "REN MUTATED"           
clus
  REN MUTATED REN WILD-TYPE 
            2           507 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A75L    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7015 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7294    TCGA-DU-7298 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302    TCGA-DU-7304 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161    TCGA-DU-8162 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166    TCGA-DU-8167 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TG    TCGA-DU-A7TJ    TCGA-E1-5302 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD    TCGA-E1-A7YE 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK    TCGA-E1-A7YL 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ    TCGA-E1-A7YS 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-5965 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-6692 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1    TCGA-FG-A6J3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711    TCGA-FG-A713 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467    TCGA-HT-7468 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563    TCGA-HT-8564 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7    TCGA-HT-A5R9 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614    TCGA-HT-A615 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74K    TCGA-HT-A74L 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489    TCGA-HW-7490 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-7491    TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-8322    TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-IK-7675    TCGA-IK-8125    TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5F6    TCGA-P5-A72U    TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A736 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6U9    TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WN    TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7IS    TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7QY    TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7R4    TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A7C3    TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84B    TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84I    TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84Q    TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RG    TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RM    TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RR    TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RV    TCGA-TQ-A7RW 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-WY-A858    TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-WY-A85D    TCGA-WY-A85E 
"REN WILD-TYPE" "REN WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  REN MUTATED        1      0      1
  REN WILD-TYPE    183    162    158
D24V11, multiclass
[1] "Remove cluster labels:" "REN MUTATED"           
clus
  REN MUTATED REN WILD-TYPE 
            2           503 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5281    TCGA-DB-A4X9 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141    TCGA-DH-5142 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B    TCGA-DH-A66D 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US    TCGA-DH-A7UT 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849    TCGA-DU-5851 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855    TCGA-DU-5870 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392    TCGA-DU-6393 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7015    TCGA-DU-7018 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7294    TCGA-DU-7298    TCGA-DU-7299 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302    TCGA-DU-7304    TCGA-DU-7306 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161    TCGA-DU-8162    TCGA-DU-8163 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166    TCGA-DU-8167    TCGA-DU-8168 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT    TCGA-DU-A5TU 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3    TCGA-DU-A6S6 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L    TCGA-DU-A76O 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA    TCGA-DU-A7TB 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A7TC    TCGA-DU-A7TG    TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-5965    TCGA-FG-6688 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563    TCGA-HT-8564    TCGA-HT-A4DS 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7    TCGA-HT-A5R9    TCGA-HT-A5RA 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-IK-8125    TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5EV    TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5F0    TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A72U 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WM    TCGA-S9-A6WN    TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7QX    TCGA-S9-A7QY    TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7R3    TCGA-S9-A7R4    TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A89Z    TCGA-TM-A7C3    TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A7CF    TCGA-TM-A84B    TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84H    TCGA-TM-A84I    TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84O    TCGA-TM-A84Q    TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RK    TCGA-TQ-A7RM    TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RV 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VV-A829    TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-WH-A86K    TCGA-WY-A858    TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-WY-A85C    TCGA-WY-A85D    TCGA-WY-A85E 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REN MUTATED        0      0      0      2
  REN WILD-TYPE     90    138    188     87
D24V12, multiclass
[1] "Remove cluster labels:" "REN MUTATED"           
clus
  REN MUTATED REN WILD-TYPE 
            2           503 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5281    TCGA-DB-A4X9 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141    TCGA-DH-5142 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B    TCGA-DH-A66D 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US    TCGA-DH-A7UT 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849    TCGA-DU-5851 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855    TCGA-DU-5870 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392    TCGA-DU-6393 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7015    TCGA-DU-7018 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7294    TCGA-DU-7298    TCGA-DU-7299 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302    TCGA-DU-7304    TCGA-DU-7306 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161    TCGA-DU-8162    TCGA-DU-8163 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166    TCGA-DU-8167    TCGA-DU-8168 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT    TCGA-DU-A5TU 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3    TCGA-DU-A6S6 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L    TCGA-DU-A76O 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA    TCGA-DU-A7TB 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A7TC    TCGA-DU-A7TG    TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-5965    TCGA-FG-6688 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563    TCGA-HT-8564    TCGA-HT-A4DS 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7    TCGA-HT-A5R9    TCGA-HT-A5RA 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-IK-8125    TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5EV    TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5F0    TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A72U 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WM    TCGA-S9-A6WN    TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7QX    TCGA-S9-A7QY    TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7R3    TCGA-S9-A7R4    TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A89Z    TCGA-TM-A7C3    TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A7CF    TCGA-TM-A84B    TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84H    TCGA-TM-A84I    TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84O    TCGA-TM-A84Q    TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RK    TCGA-TQ-A7RM    TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RV 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VV-A829    TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-WH-A86K    TCGA-WY-A858    TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-WY-A85C    TCGA-WY-A85D    TCGA-WY-A85E 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 

Clustering(25) Variable = TNRC18 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC18 MUTATED        0      0      0      2
  TNRC18 WILD-TYPE     69     43     74     52
D25V1, multiclass
[1] "Remove cluster labels:" "TNRC18 MUTATED"        
clus
  TNRC18 MUTATED TNRC18 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC18 MUTATED        0      1      0      1
  TNRC18 WILD-TYPE     63     49     48     78
D25V2, multiclass
[1] "Remove cluster labels:" "TNRC18 MUTATED"        
clus
  TNRC18 MUTATED TNRC18 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC18 MUTATED        1      0      1      0
  TNRC18 WILD-TYPE     76     93     44     60
D25V3, multiclass
[1] "Remove cluster labels:" "TNRC18 MUTATED"        
clus
  TNRC18 MUTATED TNRC18 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-87-5896 
"TNRC18 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC18 MUTATED        1      0      1
  TNRC18 WILD-TYPE    137     61     75
D25V4, multiclass
[1] "Remove cluster labels:" "TNRC18 MUTATED"        
clus
  TNRC18 MUTATED TNRC18 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-87-5896 
"TNRC18 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC18 MUTATED        3      9      0
  TNRC18 WILD-TYPE    292    472      7
D25V5, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              3              292
  CLUS_2              9              472
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC18 MUTATED        2      5      3      1
  TNRC18 WILD-TYPE    158    227     61    165
D25V6, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              5              227
  CLUS_3              3               61
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC18 MUTATED        4      2      6
  TNRC18 WILD-TYPE    223    233    186
D25V7, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              4              223
  CLUS_2              2              233
  CLUS_3              6              186
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC18 MUTATED        3      3      6
  TNRC18 WILD-TYPE    193    187    262
D25V8, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              3              193
  CLUS_2              3              187
  CLUS_3              6              262
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC18 MUTATED        4      2      4      0
  TNRC18 WILD-TYPE    132    105    179     83
D25V9, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              4              132
  CLUS_2              2              105
  CLUS_3              4              179
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC18 MUTATED        2      4      4
  TNRC18 WILD-TYPE    220    180     99
D25V10, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              2              220
  CLUS_2              4              180
  CLUS_3              4               99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC18 MUTATED        3      3      3
  TNRC18 WILD-TYPE    181    159    156
D25V11, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              3              181
  CLUS_2              3              159
  CLUS_3              3              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC18 MUTATED        0      2      4      3
  TNRC18 WILD-TYPE     90    136    184     86
D25V12, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              0               90
  CLUS_2              2              136
  CLUS_3              4              184
  CLUS_4              3               86
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = NRAS MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        0      0      1      0
  NRAS WILD-TYPE     69     43     73     54
D26V1, multiclass
[1] "Remove cluster labels:" "NRAS MUTATED"          
clus
  NRAS MUTATED NRAS WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3650     TCGA-12-3652 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        0      0      0      1
  NRAS WILD-TYPE     63     50     48     78
D26V2, multiclass
[1] "Remove cluster labels:" "NRAS MUTATED"          
clus
  NRAS MUTATED NRAS WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3650     TCGA-12-3652 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        1      0      0      0
  NRAS WILD-TYPE     76     93     45     60
D26V3, multiclass
[1] "Remove cluster labels:" "NRAS MUTATED"          
clus
  NRAS MUTATED NRAS WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        1      0      0
  NRAS WILD-TYPE    137     61     76
D26V4, multiclass
[1] "Remove cluster labels:" "NRAS MUTATED"          
clus
  NRAS MUTATED NRAS WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        1      4      0
  NRAS WILD-TYPE    294    477      7
D26V5, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            1            294
  CLUS_2            4            477
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        0      1      0      3
  NRAS WILD-TYPE    160    231     64    163
D26V6, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            160
  CLUS_2            1            231
  CLUS_3            0             64
  CLUS_4            3            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        0      1      3
  NRAS WILD-TYPE    227    234    189
D26V7, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            227
  CLUS_2            1            234
  CLUS_3            3            189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        0      1      3
  NRAS WILD-TYPE    196    189    265
D26V8, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            196
  CLUS_2            1            189
  CLUS_3            3            265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        0      0      3      1
  NRAS WILD-TYPE    136    107    180     82
D26V9, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            136
  CLUS_2            0            107
  CLUS_3            3            180
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        1      2      1
  NRAS WILD-TYPE    221    182    102
D26V10, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            1            221
  CLUS_2            2            182
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        0      2      2
  NRAS WILD-TYPE    184    160    157
D26V11, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            184
  CLUS_2            2            160
  CLUS_3            2            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        0      2      2      0
  NRAS WILD-TYPE     90    136    186     89
D26V12, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0             90
  CLUS_2            2            136
  CLUS_3            2            186
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = PLCG1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG1 MUTATED        2      0      1      2
  PLCG1 WILD-TYPE     67     43     73     52
D27V1, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             2              67
  CLUS_2             0              43
  CLUS_3             1              73
  CLUS_4             2              52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG1 MUTATED        2      1      1      1
  PLCG1 WILD-TYPE     61     49     47     78
D27V2, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             2              61
  CLUS_2             1              49
  CLUS_3             1              47
  CLUS_4             1              78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG1 MUTATED        2      1      1      1
  PLCG1 WILD-TYPE     75     92     44     59
D27V3, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             2              75
  CLUS_2             1              92
  CLUS_3             1              44
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG1 MUTATED        2      1      2
  PLCG1 WILD-TYPE    136     60     74
D27V4, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             2             136
  CLUS_2             1              60
  CLUS_3             2              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG1 MUTATED        9      2      0
  PLCG1 WILD-TYPE    286    479      7
D27V5, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             9             286
  CLUS_2             2             479
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG1 MUTATED        4      1      1      1
  PLCG1 WILD-TYPE    156    231     63    165
D27V6, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             4             156
  CLUS_2             1             231
  CLUS_3             1              63
  CLUS_4             1             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG1 MUTATED        4      2      1
  PLCG1 WILD-TYPE    223    233    191
D27V7, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             4             223
  CLUS_2             2             233
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG1 MUTATED        4      2      1
  PLCG1 WILD-TYPE    192    188    267
D27V8, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             4             192
  CLUS_2             2             188
  CLUS_3             1             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG1 MUTATED        5      0      1      0
  PLCG1 WILD-TYPE    131    107    182     83
D27V9, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             5             131
  CLUS_2             0             107
  CLUS_3             1             182
  CLUS_4             0              83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG1 MUTATED        3      0      3
  PLCG1 WILD-TYPE    219    184    100
D27V10, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             3             219
  CLUS_2             0             184
  CLUS_3             3             100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG1 MUTATED        5      1      0
  PLCG1 WILD-TYPE    179    161    159
D27V11, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             5             179
  CLUS_2             1             161
  CLUS_3             0             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG1 MUTATED        0      2      1      3
  PLCG1 WILD-TYPE     90    136    187     86
D27V12, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             2             136
  CLUS_3             1             187
  CLUS_4             3              86
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = SLC26A3 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC26A3 MUTATED        1      1      2      2
  SLC26A3 WILD-TYPE     68     42     72     52
D28V1, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               1                68
  CLUS_2               1                42
  CLUS_3               2                72
  CLUS_4               2                52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC26A3 MUTATED        2      1      2      1
  SLC26A3 WILD-TYPE     61     49     46     78
D28V2, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               2                61
  CLUS_2               1                49
  CLUS_3               2                46
  CLUS_4               1                78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC26A3 MUTATED        1      4      0      2
  SLC26A3 WILD-TYPE     76     89     45     58
D28V3, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               1                76
  CLUS_2               4                89
  CLUS_3               0                45
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC26A3 MUTATED        4      0      3
  SLC26A3 WILD-TYPE    134     61     73
D28V4, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               4               134
  CLUS_2               0                61
  CLUS_3               3                73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC26A3 MUTATED        9      2      0
  SLC26A3 WILD-TYPE    286    479      7
D28V5, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               9               286
  CLUS_2               2               479
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC26A3 MUTATED        5      1      0      0
  SLC26A3 WILD-TYPE    155    231     64    166
D28V6, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               5               155
  CLUS_2               1               231
  CLUS_3               0                64
  CLUS_4               0               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC26A3 MUTATED        7      1      0
  SLC26A3 WILD-TYPE    220    234    192
D28V7, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               7               220
  CLUS_2               1               234
  CLUS_3               0               192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC26A3 MUTATED        6      2      0
  SLC26A3 WILD-TYPE    190    188    268
D28V8, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               6               190
  CLUS_2               2               188
  CLUS_3               0               268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC26A3 MUTATED        1      3      0      0
  SLC26A3 WILD-TYPE    135    104    183     83
D28V9, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               1               135
  CLUS_2               3               104
  CLUS_3               0               183
  CLUS_4               0                83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC26A3 MUTATED        1      0      3
  SLC26A3 WILD-TYPE    221    184    100
D28V10, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               1               221
  CLUS_2               0               184
  CLUS_3               3               100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC26A3 MUTATED        2      1      1
  SLC26A3 WILD-TYPE    182    161    158
D28V11, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               2               182
  CLUS_2               1               161
  CLUS_3               1               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC26A3 MUTATED        1      0      1      2
  SLC26A3 WILD-TYPE     89    138    187     87
D28V12, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               1                89
  CLUS_2               0               138
  CLUS_3               1               187
  CLUS_4               2                87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = ZBTB20 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED        0      0      0      1
  ZBTB20 WILD-TYPE     69     43     74     53
D29V1, multiclass
[1] "Remove cluster labels:" "ZBTB20 MUTATED"        
clus
  ZBTB20 MUTATED ZBTB20 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0152 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0154       TCGA-06-0155       TCGA-06-0157       TCGA-06-0158 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED        0      0      0      1
  ZBTB20 WILD-TYPE     63     50     48     78
D29V2, multiclass
[1] "Remove cluster labels:" "ZBTB20 MUTATED"        
clus
  ZBTB20 MUTATED ZBTB20 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0152 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0154       TCGA-06-0155       TCGA-06-0157       TCGA-06-0158 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED        0      0      0      0
  ZBTB20 WILD-TYPE     77     93     45     60
D29V3, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED        0      0      0
  ZBTB20 WILD-TYPE    138     61     76
D29V4, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED        0     22      0
  ZBTB20 WILD-TYPE    295    459      7
D29V5, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              0              295
  CLUS_2             22              459
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED        2      3      0     16
  ZBTB20 WILD-TYPE    158    229     64    150
D29V6, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              3              229
  CLUS_3              0               64
  CLUS_4             16              150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED        3      3     16
  ZBTB20 WILD-TYPE    224    232    176
D29V7, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              3              224
  CLUS_2              3              232
  CLUS_3             16              176
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED        0      3     19
  ZBTB20 WILD-TYPE    196    187    249
D29V8, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              0              196
  CLUS_2              3              187
  CLUS_3             19              249
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED        3      2     12      4
  ZBTB20 WILD-TYPE    133    105    171     79
D29V9, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              3              133
  CLUS_2              2              105
  CLUS_3             12              171
  CLUS_4              4               79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED        5     14      2
  ZBTB20 WILD-TYPE    217    170    101
D29V10, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              5              217
  CLUS_2             14              170
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED        3      7     11
  ZBTB20 WILD-TYPE    181    155    148
D29V11, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              3              181
  CLUS_2              7              155
  CLUS_3             11              148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED        1      5     14      1
  ZBTB20 WILD-TYPE     89    133    174     88
D29V12, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              1               89
  CLUS_2              5              133
  CLUS_3             14              174
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = TRERF1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRERF1 MUTATED        0      0      0      0
  TRERF1 WILD-TYPE     69     43     74     54
D30V1, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRERF1 MUTATED        0      0      0      0
  TRERF1 WILD-TYPE     63     50     48     79
D30V2, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRERF1 MUTATED        0      0      0      1
  TRERF1 WILD-TYPE     77     93     45     59
D30V3, multiclass
[1] "Remove cluster labels:" "TRERF1 MUTATED"        
clus
  TRERF1 MUTATED TRERF1 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5953 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-26-5139       TCGA-26-6173       TCGA-26-6174       TCGA-27-1830 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2502       TCGA-28-2509 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5211 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-74-6573       TCGA-74-6575 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRERF1 MUTATED        1      0      0
  TRERF1 WILD-TYPE    137     61     76
D30V4, multiclass
[1] "Remove cluster labels:" "TRERF1 MUTATED"        
clus
  TRERF1 MUTATED TRERF1 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5953 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-26-5139       TCGA-26-6173       TCGA-26-6174       TCGA-27-1830 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2502       TCGA-28-2509 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5211 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-74-6573       TCGA-74-6575 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRERF1 MUTATED        1      6      0
  TRERF1 WILD-TYPE    294    475      7
D30V5, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              1              294
  CLUS_2              6              475
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRERF1 MUTATED        2      3      1      1
  TRERF1 WILD-TYPE    158    229     63    165
D30V6, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              3              229
  CLUS_3              1               63
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRERF1 MUTATED        2      2      2
  TRERF1 WILD-TYPE    225    233    190
D30V7, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              2              225
  CLUS_2              2              233
  CLUS_3              2              190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRERF1 MUTATED        0      5      1
  TRERF1 WILD-TYPE    196    185    267
D30V8, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              0              196
  CLUS_2              5              185
  CLUS_3              1              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRERF1 MUTATED        1      3      2      0
  TRERF1 WILD-TYPE    135    104    181     83
D30V9, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              1              135
  CLUS_2              3              104
  CLUS_3              2              181
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRERF1 MUTATED        2      2      2
  TRERF1 WILD-TYPE    220    182    101
D30V10, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              2              220
  CLUS_2              2              182
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRERF1 MUTATED        2      0      4
  TRERF1 WILD-TYPE    182    162    155
D30V11, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              2              182
  CLUS_2              0              162
  CLUS_3              4              155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRERF1 MUTATED        1      0      4      1
  TRERF1 WILD-TYPE     89    138    184     88
D30V12, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              1               89
  CLUS_2              0              138
  CLUS_3              4              184
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = MX2 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MX2 MUTATED        2      0      2      0
  MX2 WILD-TYPE     67     43     72     54
D31V1, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           2            67
  CLUS_2           0            43
  CLUS_3           2            72
  CLUS_4           0            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MX2 MUTATED        1      0      1      2
  MX2 WILD-TYPE     62     50     47     77
D31V2, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           1            62
  CLUS_2           0            50
  CLUS_3           1            47
  CLUS_4           2            77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MX2 MUTATED        2      0      1      1
  MX2 WILD-TYPE     75     93     44     59
D31V3, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           2            75
  CLUS_2           0            93
  CLUS_3           1            44
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MX2 MUTATED        1      1      2
  MX2 WILD-TYPE    137     60     74
D31V4, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           1           137
  CLUS_2           1            60
  CLUS_3           2            74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MX2 MUTATED        5      4      0
  MX2 WILD-TYPE    290    477      7
D31V5, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           5           290
  CLUS_2           4           477
  CLUS_3           0             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MX2 MUTATED        2      1      0      2
  MX2 WILD-TYPE    158    231     64    164
D31V6, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           2           158
  CLUS_2           1           231
  CLUS_3           0            64
  CLUS_4           2           164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MX2 MUTATED        1      2      1
  MX2 WILD-TYPE    226    233    191
D31V7, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           1           226
  CLUS_2           2           233
  CLUS_3           1           191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MX2 MUTATED        1      1      2
  MX2 WILD-TYPE    195    189    266
D31V8, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           1           195
  CLUS_2           1           189
  CLUS_3           2           266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MX2 MUTATED        0      2      1      1
  MX2 WILD-TYPE    136    105    182     82
D31V9, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           0           136
  CLUS_2           2           105
  CLUS_3           1           182
  CLUS_4           1            82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MX2 MUTATED        2      1      1
  MX2 WILD-TYPE    220    183    102
D31V10, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           2           220
  CLUS_2           1           183
  CLUS_3           1           102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MX2 MUTATED        2      1      1
  MX2 WILD-TYPE    182    161    158
D31V11, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           2           182
  CLUS_2           1           161
  CLUS_3           1           158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MX2 MUTATED        0      2      1      1
  MX2 WILD-TYPE     90    136    187     88
D31V12, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           0            90
  CLUS_2           2           136
  CLUS_3           1           187
  CLUS_4           1            88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = ZMIZ1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMIZ1 MUTATED        2      1      0      1
  ZMIZ1 WILD-TYPE     67     42     74     53
D32V1, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             2              67
  CLUS_2             1              42
  CLUS_3             0              74
  CLUS_4             1              53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMIZ1 MUTATED        1      1      0      2
  ZMIZ1 WILD-TYPE     62     49     48     77
D32V2, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             1              62
  CLUS_2             1              49
  CLUS_3             0              48
  CLUS_4             2              77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMIZ1 MUTATED        2      2      0      0
  ZMIZ1 WILD-TYPE     75     91     45     60
D32V3, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             2              75
  CLUS_2             2              91
  CLUS_3             0              45
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMIZ1 MUTATED        1      1      2
  ZMIZ1 WILD-TYPE    137     60     74
D32V4, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             1             137
  CLUS_2             1              60
  CLUS_3             2              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMIZ1 MUTATED        2     10      0
  ZMIZ1 WILD-TYPE    293    471      7
D32V5, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             2             293
  CLUS_2            10             471
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMIZ1 MUTATED        2      2      0      5
  ZMIZ1 WILD-TYPE    158    230     64    161
D32V6, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             2             158
  CLUS_2             2             230
  CLUS_3             0              64
  CLUS_4             5             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMIZ1 MUTATED        3      5      3
  ZMIZ1 WILD-TYPE    224    230    189
D32V7, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             3             224
  CLUS_2             5             230
  CLUS_3             3             189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMIZ1 MUTATED        1      4      6
  ZMIZ1 WILD-TYPE    195    186    262
D32V8, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             4             186
  CLUS_3             6             262
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMIZ1 MUTATED        1      2      3      3
  ZMIZ1 WILD-TYPE    135    105    180     80
D32V9, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             1             135
  CLUS_2             2             105
  CLUS_3             3             180
  CLUS_4             3              80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMIZ1 MUTATED        5      2      2
  ZMIZ1 WILD-TYPE    217    182    101
D32V10, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             5             217
  CLUS_2             2             182
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMIZ1 MUTATED        0      6      3
  ZMIZ1 WILD-TYPE    184    156    156
D32V11, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             0             184
  CLUS_2             6             156
  CLUS_3             3             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMIZ1 MUTATED        0      4      4      1
  ZMIZ1 WILD-TYPE     90    134    184     88
D32V12, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             4             134
  CLUS_3             4             184
  CLUS_4             1              88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = DDX5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX5 MUTATED        1      0      0      2
  DDX5 WILD-TYPE     68     43     74     52
D33V1, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            1             68
  CLUS_2            0             43
  CLUS_3            0             74
  CLUS_4            2             52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX5 MUTATED        1      1      0      1
  DDX5 WILD-TYPE     62     49     48     78
D33V2, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            1             62
  CLUS_2            1             49
  CLUS_3            0             48
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX5 MUTATED        0      2      1      1
  DDX5 WILD-TYPE     77     91     44     59
D33V3, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            0             77
  CLUS_2            2             91
  CLUS_3            1             44
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DDX5 MUTATED        1      1      2
  DDX5 WILD-TYPE    137     60     74
D33V4, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            1            137
  CLUS_2            1             60
  CLUS_3            2             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DDX5 MUTATED        3      6      0
  DDX5 WILD-TYPE    292    475      7
D33V5, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            3            292
  CLUS_2            6            475
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX5 MUTATED        3      2      0      2
  DDX5 WILD-TYPE    157    230     64    164
D33V6, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            3            157
  CLUS_2            2            230
  CLUS_3            0             64
  CLUS_4            2            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DDX5 MUTATED        2      3      1
  DDX5 WILD-TYPE    225    232    191
D33V7, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            2            225
  CLUS_2            3            232
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DDX5 MUTATED        1      3      2
  DDX5 WILD-TYPE    195    187    266
D33V8, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            3            187
  CLUS_3            2            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX5 MUTATED        0      2      3      0
  DDX5 WILD-TYPE    136    105    180     83
D33V9, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            0            136
  CLUS_2            2            105
  CLUS_3            3            180
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DDX5 MUTATED        1      3      1
  DDX5 WILD-TYPE    221    181    102
D33V10, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            1            221
  CLUS_2            3            181
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DDX5 MUTATED        0      1      4
  DDX5 WILD-TYPE    184    161    155
D33V11, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            0            184
  CLUS_2            1            161
  CLUS_3            4            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX5 MUTATED        0      1      4      0
  DDX5 WILD-TYPE     90    137    184     89
D33V12, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            1            137
  CLUS_3            4            184
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = DNMT3A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNMT3A MUTATED        0      0      0      0
  DNMT3A WILD-TYPE     69     43     74     54
D34V1, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNMT3A MUTATED        0      0      0      0
  DNMT3A WILD-TYPE     63     50     48     79
D34V2, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNMT3A MUTATED        0      0      0      0
  DNMT3A WILD-TYPE     77     93     45     60
D34V3, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNMT3A MUTATED        0      0      0
  DNMT3A WILD-TYPE    138     61     76
D34V4, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNMT3A MUTATED        0     10      0
  DNMT3A WILD-TYPE    295    471      7
D34V5, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              0              295
  CLUS_2             10              471
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNMT3A MUTATED        2      4      1      3
  DNMT3A WILD-TYPE    158    228     63    163
D34V6, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              2              158
  CLUS_2              4              228
  CLUS_3              1               63
  CLUS_4              3              163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNMT3A MUTATED        1      5      4
  DNMT3A WILD-TYPE    226    230    188
D34V7, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              1              226
  CLUS_2              5              230
  CLUS_3              4              188
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNMT3A MUTATED        0      4      6
  DNMT3A WILD-TYPE    196    186    262
D34V8, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              0              196
  CLUS_2              4              186
  CLUS_3              6              262
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNMT3A MUTATED        1      2      6      1
  DNMT3A WILD-TYPE    135    105    177     82
D34V9, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              1              135
  CLUS_2              2              105
  CLUS_3              6              177
  CLUS_4              1               82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNMT3A MUTATED        1      5      4
  DNMT3A WILD-TYPE    221    179     99
D34V10, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              1              221
  CLUS_2              5              179
  CLUS_3              4               99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNMT3A MUTATED        3      4      3
  DNMT3A WILD-TYPE    181    158    156
D34V11, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              3              181
  CLUS_2              4              158
  CLUS_3              3              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNMT3A MUTATED        1      3      4      2
  DNMT3A WILD-TYPE     89    135    184     87
D34V12, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              1               89
  CLUS_2              3              135
  CLUS_3              4              184
  CLUS_4              2               87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = PTPN11 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN11 MUTATED        1      0      1      1
  PTPN11 WILD-TYPE     68     43     73     53
D35V1, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              1               68
  CLUS_2              0               43
  CLUS_3              1               73
  CLUS_4              1               53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN11 MUTATED        1      0      0      2
  PTPN11 WILD-TYPE     62     50     48     77
D35V2, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              1               62
  CLUS_2              0               50
  CLUS_3              0               48
  CLUS_4              2               77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN11 MUTATED        0      0      3      1
  PTPN11 WILD-TYPE     77     93     42     59
D35V3, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              0               77
  CLUS_2              0               93
  CLUS_3              3               42
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN11 MUTATED        2      1      1
  PTPN11 WILD-TYPE    136     60     75
D35V4, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              2              136
  CLUS_2              1               60
  CLUS_3              1               75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN11 MUTATED        5      5      0
  PTPN11 WILD-TYPE    290    476      7
D35V5, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              5              290
  CLUS_2              5              476
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN11 MUTATED        4      1      3      1
  PTPN11 WILD-TYPE    156    231     61    165
D35V6, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              4              156
  CLUS_2              1              231
  CLUS_3              3               61
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN11 MUTATED        5      1      3
  PTPN11 WILD-TYPE    222    234    189
D35V7, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              5              222
  CLUS_2              1              234
  CLUS_3              3              189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN11 MUTATED        5      2      2
  PTPN11 WILD-TYPE    191    188    266
D35V8, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              5              191
  CLUS_2              2              188
  CLUS_3              2              266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN11 MUTATED        3      3      1      0
  PTPN11 WILD-TYPE    133    104    182     83
D35V9, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              3              133
  CLUS_2              3              104
  CLUS_3              1              182
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN11 MUTATED        1      1      5
  PTPN11 WILD-TYPE    221    183     98
D35V10, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              1              221
  CLUS_2              1              183
  CLUS_3              5               98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN11 MUTATED        6      0      1
  PTPN11 WILD-TYPE    178    162    158
D35V11, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              6              178
  CLUS_2              0              162
  CLUS_3              1              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN11 MUTATED        1      0      1      5
  PTPN11 WILD-TYPE     89    138    187     84
D35V12, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              1               89
  CLUS_2              0              138
  CLUS_3              1              187
  CLUS_4              5               84
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = ZNF292 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED        0      0      2      1
  ZNF292 WILD-TYPE     69     43     72     53
D36V1, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              0               69
  CLUS_2              0               43
  CLUS_3              2               72
  CLUS_4              1               53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED        0      0      2      1
  ZNF292 WILD-TYPE     63     50     46     78
D36V2, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              0               63
  CLUS_2              0               50
  CLUS_3              2               46
  CLUS_4              1               78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED        0      2      1      0
  ZNF292 WILD-TYPE     77     91     44     60
D36V3, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              0               77
  CLUS_2              2               91
  CLUS_3              1               44
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED        1      0      2
  ZNF292 WILD-TYPE    137     61     74
D36V4, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              1              137
  CLUS_2              0               61
  CLUS_3              2               74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED        3     14      0
  ZNF292 WILD-TYPE    292    467      7
D36V5, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              3              292
  CLUS_2             14              467
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED        2      4      1      8
  ZNF292 WILD-TYPE    158    228     63    158
D36V6, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              4              228
  CLUS_3              1               63
  CLUS_4              8              158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED        3      4      8
  ZNF292 WILD-TYPE    224    231    184
D36V7, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              3              224
  CLUS_2              4              231
  CLUS_3              8              184
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED        1      5      9
  ZNF292 WILD-TYPE    195    185    259
D36V8, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              5              185
  CLUS_3              9              259
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED        2      3      8      1
  ZNF292 WILD-TYPE    134    104    175     82
D36V9, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              2              134
  CLUS_2              3              104
  CLUS_3              8              175
  CLUS_4              1               82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED        4      8      2
  ZNF292 WILD-TYPE    218    176    101
D36V10, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              4              218
  CLUS_2              8              176
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED        2      4      8
  ZNF292 WILD-TYPE    182    158    151
D36V11, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              2              182
  CLUS_2              4              158
  CLUS_3              8              151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED        0      3     10      1
  ZNF292 WILD-TYPE     90    135    178     88
D36V12, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              0               90
  CLUS_2              3              135
  CLUS_3             10              178
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = DSP MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSP MUTATED        3      0      2      3
  DSP WILD-TYPE     66     43     72     51
D37V1, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           3            66
  CLUS_2           0            43
  CLUS_3           2            72
  CLUS_4           3            51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSP MUTATED        2      1      2      3
  DSP WILD-TYPE     61     49     46     76
D37V2, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           2            61
  CLUS_2           1            49
  CLUS_3           2            46
  CLUS_4           3            76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSP MUTATED        3      5      3      1
  DSP WILD-TYPE     74     88     42     59
D37V3, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           3            74
  CLUS_2           5            88
  CLUS_3           3            42
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DSP MUTATED        6      0      6
  DSP WILD-TYPE    132     61     70
D37V4, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           6           132
  CLUS_2           0            61
  CLUS_3           6            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DSP MUTATED       13      8      0
  DSP WILD-TYPE    282    473      7
D37V5, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1          13           282
  CLUS_2           8           473
  CLUS_3           0             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSP MUTATED        9      3      1      2
  DSP WILD-TYPE    151    229     63    164
D37V6, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           9           151
  CLUS_2           3           229
  CLUS_3           1            63
  CLUS_4           2           164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DSP MUTATED        5      3      2
  DSP WILD-TYPE    222    232    190
D37V7, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           5           222
  CLUS_2           3           232
  CLUS_3           2           190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DSP MUTATED        4      3      3
  DSP WILD-TYPE    192    187    265
D37V8, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           4           192
  CLUS_2           3           187
  CLUS_3           3           265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSP MUTATED        3      3      2      1
  DSP WILD-TYPE    133    104    181     82
D37V9, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           3           133
  CLUS_2           3           104
  CLUS_3           2           181
  CLUS_4           1            82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DSP MUTATED        5      0      4
  DSP WILD-TYPE    217    184     99
D37V10, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           5           217
  CLUS_2           0           184
  CLUS_3           4            99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DSP MUTATED        4      3      2
  DSP WILD-TYPE    180    159    157
D37V11, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           4           180
  CLUS_2           3           159
  CLUS_3           2           157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSP MUTATED        2      2      2      3
  DSP WILD-TYPE     88    136    186     86
D37V12, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           2            88
  CLUS_2           2           136
  CLUS_3           2           186
  CLUS_4           3            86
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = BRAF MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRAF MUTATED        1      1      2      0
  BRAF WILD-TYPE     68     42     72     54
D38V1, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            1             68
  CLUS_2            1             42
  CLUS_3            2             72
  CLUS_4            0             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRAF MUTATED        2      0      1      1
  BRAF WILD-TYPE     61     50     47     78
D38V2, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            2             61
  CLUS_2            0             50
  CLUS_3            1             47
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRAF MUTATED        2      1      0      3
  BRAF WILD-TYPE     75     92     45     57
D38V3, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            2             75
  CLUS_2            1             92
  CLUS_3            0             45
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRAF MUTATED        2      4      0
  BRAF WILD-TYPE    136     57     76
D38V4, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            2            136
  CLUS_2            4             57
  CLUS_3            0             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRAF MUTATED        6      5      0
  BRAF WILD-TYPE    289    476      7
D38V5, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            6            289
  CLUS_2            5            476
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRAF MUTATED        3      0      4      0
  BRAF WILD-TYPE    157    232     60    166
D38V6, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            3            157
  CLUS_2            0            232
  CLUS_3            4             60
  CLUS_4            0            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRAF MUTATED        5      0      3
  BRAF WILD-TYPE    222    235    189
D38V7, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            5            222
  CLUS_2            0            235
  CLUS_3            3            189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRAF MUTATED        4      1      3
  BRAF WILD-TYPE    192    189    265
D38V8, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            4            192
  CLUS_2            1            189
  CLUS_3            3            265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRAF MUTATED        0      2      3      0
  BRAF WILD-TYPE    136    105    180     83
D38V9, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            0            136
  CLUS_2            2            105
  CLUS_3            3            180
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRAF MUTATED        0      3      2
  BRAF WILD-TYPE    222    181    101
D38V10, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            0            222
  CLUS_2            3            181
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRAF MUTATED        1      0      4
  BRAF WILD-TYPE    183    162    155
D38V11, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            1            183
  CLUS_2            0            162
  CLUS_3            4            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRAF MUTATED        0      0      3      2
  BRAF WILD-TYPE     90    138    185     87
D38V12, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            0             90
  CLUS_2            0            138
  CLUS_3            3            185
  CLUS_4            2             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = EGFR MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGFR MUTATED       20      7     31     10
  EGFR WILD-TYPE     49     36     43     44
D39V1, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           20             49
  CLUS_2            7             36
  CLUS_3           31             43
  CLUS_4           10             44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGFR MUTATED       18      7     17     26
  EGFR WILD-TYPE     45     43     31     53
D39V2, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           18             45
  CLUS_2            7             43
  CLUS_3           17             31
  CLUS_4           26             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGFR MUTATED       22     27      8     17
  EGFR WILD-TYPE     55     66     37     43
D39V3, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           22             55
  CLUS_2           27             66
  CLUS_3            8             37
  CLUS_4           17             43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGFR MUTATED       30     19     25
  EGFR WILD-TYPE    108     42     51
D39V4, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           30            108
  CLUS_2           19             42
  CLUS_3           25             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGFR MUTATED       95     11      1
  EGFR WILD-TYPE    200    470      6
D39V5, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           95            200
  CLUS_2           11            470
  CLUS_3            1              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGFR MUTATED       47      0      6      3
  EGFR WILD-TYPE    113    232     58    163
D39V6, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           47            113
  CLUS_2            0            232
  CLUS_3            6             58
  CLUS_4            3            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGFR MUTATED       71      0      9
  EGFR WILD-TYPE    156    235    183
D39V7, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           71            156
  CLUS_2            0            235
  CLUS_3            9            183
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGFR MUTATED       69      2      9
  EGFR WILD-TYPE    127    188    259
D39V8, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           69            127
  CLUS_2            2            188
  CLUS_3            9            259
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGFR MUTATED       11     11     13      0
  EGFR WILD-TYPE    125     96    170     83
D39V9, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           11            125
  CLUS_2           11             96
  CLUS_3           13            170
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGFR MUTATED        1      9     25
  EGFR WILD-TYPE    221    175     78
D39V10, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1            1            221
  CLUS_2            9            175
  CLUS_3           25             78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGFR MUTATED       23      0     12
  EGFR WILD-TYPE    161    162    147
D39V11, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           23            161
  CLUS_2            0            162
  CLUS_3           12            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGFR MUTATED        0      0      8     27
  EGFR WILD-TYPE     90    138    180     62
D39V12, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1            0             90
  CLUS_2            0            138
  CLUS_3            8            180
  CLUS_4           27             62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = RBPJ MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBPJ MUTATED        0      0      0      0
  RBPJ WILD-TYPE     69     43     74     54
D40V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBPJ MUTATED        0      0      0      0
  RBPJ WILD-TYPE     63     50     48     79
D40V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBPJ MUTATED        0      0      0      0
  RBPJ WILD-TYPE     77     93     45     60
D40V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBPJ MUTATED        0      0      0
  RBPJ WILD-TYPE    138     61     76
D40V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBPJ MUTATED        0      7      0
  RBPJ WILD-TYPE    295    474      7
D40V5, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            0            295
  CLUS_2            7            474
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBPJ MUTATED        0      1      1      5
  RBPJ WILD-TYPE    160    231     63    161
D40V6, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            0            160
  CLUS_2            1            231
  CLUS_3            1             63
  CLUS_4            5            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBPJ MUTATED        2      0      5
  RBPJ WILD-TYPE    225    235    187
D40V7, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            2            225
  CLUS_2            0            235
  CLUS_3            5            187
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBPJ MUTATED        0      2      5
  RBPJ WILD-TYPE    196    188    263
D40V8, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            0            196
  CLUS_2            2            188
  CLUS_3            5            263
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBPJ MUTATED        0      2      4      1
  RBPJ WILD-TYPE    136    105    179     82
D40V9, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            0            136
  CLUS_2            2            105
  CLUS_3            4            179
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBPJ MUTATED        0      5      2
  RBPJ WILD-TYPE    222    179    101
D40V10, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            0            222
  CLUS_2            5            179
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBPJ MUTATED        1      1      5
  RBPJ WILD-TYPE    183    161    154
D40V11, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            1            183
  CLUS_2            1            161
  CLUS_3            5            154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBPJ MUTATED        0      1      4      2
  RBPJ WILD-TYPE     90    137    184     87
D40V12, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            0             90
  CLUS_2            1            137
  CLUS_3            4            184
  CLUS_4            2             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = SEMG2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMG2 MUTATED        2      1      6      2
  SEMG2 WILD-TYPE     67     42     68     52
D41V1, multiclass
        clus
vv       SEMG2 MUTATED SEMG2 WILD-TYPE
  CLUS_1             2              67
  CLUS_2             1              42
  CLUS_3             6              68
  CLUS_4             2              52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMG2 MUTATED        1      2      2      6
  SEMG2 WILD-TYPE     62     48     46     73
D41V2, multiclass
        clus
vv       SEMG2 MUTATED SEMG2 WILD-TYPE
  CLUS_1             1              62
  CLUS_2             2              48
  CLUS_3             2              46
  CLUS_4             6              73
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMG2 MUTATED        3      6      1      1
  SEMG2 WILD-TYPE     74     87     44     59
D41V3, multiclass
        clus
vv       SEMG2 MUTATED SEMG2 WILD-TYPE
  CLUS_1             3              74
  CLUS_2             6              87
  CLUS_3             1              44
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SEMG2 MUTATED        5      3      3
  SEMG2 WILD-TYPE    133     58     73
D41V4, multiclass
        clus
vv       SEMG2 MUTATED SEMG2 WILD-TYPE
  CLUS_1             5             133
  CLUS_2             3              58
  CLUS_3             3              73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SEMG2 MUTATED       12      1      0
  SEMG2 WILD-TYPE    283    480      7
D41V5, multiclass
        clus
vv       SEMG2 MUTATED SEMG2 WILD-TYPE
  CLUS_1            12             283
  CLUS_2             1             480
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMG2 MUTATED        4      0      0      1
  SEMG2 WILD-TYPE    156    232     64    165
D41V6, multiclass
        clus
vv       SEMG2 MUTATED SEMG2 WILD-TYPE
  CLUS_1             4             156
  CLUS_2             0             232
  CLUS_3             0              64
  CLUS_4             1             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SEMG2 MUTATED        5      0      1
  SEMG2 WILD-TYPE    222    235    191
D41V7, multiclass
        clus
vv       SEMG2 MUTATED SEMG2 WILD-TYPE
  CLUS_1             5             222
  CLUS_2             0             235
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SEMG2 MUTATED        5      0      1
  SEMG2 WILD-TYPE    191    190    267
D41V8, multiclass
        clus
vv       SEMG2 MUTATED SEMG2 WILD-TYPE
  CLUS_1             5             191
  CLUS_2             0             190
  CLUS_3             1             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMG2 MUTATED        0      1      1      0
  SEMG2 WILD-TYPE    136    106    182     83
D41V9, multiclass
[1] "Remove cluster labels:" "SEMG2 MUTATED"         
clus
  SEMG2 MUTATED SEMG2 WILD-TYPE 
              2             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SEMG2 MUTATED        0      1      1
  SEMG2 WILD-TYPE    222    183    102
D41V10, multiclass
[1] "Remove cluster labels:" "SEMG2 MUTATED"         
clus
  SEMG2 MUTATED SEMG2 WILD-TYPE 
              2             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SEMG2 MUTATED        1      1      0
  SEMG2 WILD-TYPE    183    161    159
D41V11, multiclass
[1] "Remove cluster labels:" "SEMG2 MUTATED"         
clus
  SEMG2 MUTATED SEMG2 WILD-TYPE 
              2             503 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TJ 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495      TCGA-HW-8319 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMG2 MUTATED        0      0      1      1
  SEMG2 WILD-TYPE     90    138    187     88
D41V12, multiclass
[1] "Remove cluster labels:" "SEMG2 MUTATED"         
clus
  SEMG2 MUTATED SEMG2 WILD-TYPE 
              2             503 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TJ 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495      TCGA-HW-8319 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" "SEMG2 WILD-TYPE" 

Clustering(42) Variable = ARID2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED        1      0      0      1
  ARID2 WILD-TYPE     68     43     74     53
D42V1, multiclass
[1] "Remove cluster labels:" "ARID2 MUTATED"         
clus
  ARID2 MUTATED ARID2 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1979      TCGA-32-1980 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED        1      1      0      0
  ARID2 WILD-TYPE     62     49     48     79
D42V2, multiclass
[1] "Remove cluster labels:" "ARID2 MUTATED"         
clus
  ARID2 MUTATED ARID2 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1979      TCGA-32-1980 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED        0      1      0      1
  ARID2 WILD-TYPE     77     92     45     59
D42V3, multiclass
[1] "Remove cluster labels:" "ARID2 MUTATED"         
clus
  ARID2 MUTATED ARID2 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-87-5896 
"ARID2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED        0      1      1
  ARID2 WILD-TYPE    138     60     75
D42V4, multiclass
[1] "Remove cluster labels:" "ARID2 MUTATED"         
clus
  ARID2 MUTATED ARID2 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-87-5896 
"ARID2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED        3     10      0
  ARID2 WILD-TYPE    292    471      7
D42V5, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             3             292
  CLUS_2            10             471
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED        3      5      1      2
  ARID2 WILD-TYPE    157    227     63    164
D42V6, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             3             157
  CLUS_2             5             227
  CLUS_3             1              63
  CLUS_4             2             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED        4      4      4
  ARID2 WILD-TYPE    223    231    188
D42V7, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             4             223
  CLUS_2             4             231
  CLUS_3             4             188
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED        1      6      5
  ARID2 WILD-TYPE    195    184    263
D42V8, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             6             184
  CLUS_3             5             263
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED        2      4      3      1
  ARID2 WILD-TYPE    134    103    180     82
D42V9, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             2             134
  CLUS_2             4             103
  CLUS_3             3             180
  CLUS_4             1              82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED        3      3      4
  ARID2 WILD-TYPE    219    181     99
D42V10, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             3             219
  CLUS_2             3             181
  CLUS_3             4              99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED        3      2      5
  ARID2 WILD-TYPE    181    160    154
D42V11, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             3             181
  CLUS_2             2             160
  CLUS_3             5             154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED        1      1      5      3
  ARID2 WILD-TYPE     89    137    183     86
D42V12, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             1              89
  CLUS_2             1             137
  CLUS_3             5             183
  CLUS_4             3              86
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = ANKRD36 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD36 MUTATED        0      0      0      0
  ANKRD36 WILD-TYPE     69     43     74     54
D43V1, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD36 MUTATED        0      0      0      0
  ANKRD36 WILD-TYPE     63     50     48     79
D43V2, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD36 MUTATED        0      0      0      0
  ANKRD36 WILD-TYPE     77     93     45     60
D43V3, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD36 MUTATED        0      0      0
  ANKRD36 WILD-TYPE    138     61     76
D43V4, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD36 MUTATED        1      6      0
  ANKRD36 WILD-TYPE    294    475      7
D43V5, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               1               294
  CLUS_2               6               475
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD36 MUTATED        1      6      0      0
  ANKRD36 WILD-TYPE    159    226     64    166
D43V6, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               1               159
  CLUS_2               6               226
  CLUS_3               0                64
  CLUS_4               0               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD36 MUTATED        1      4      2
  ANKRD36 WILD-TYPE    226    231    190
D43V7, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               1               226
  CLUS_2               4               231
  CLUS_3               2               190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD36 MUTATED        1      4      2
  ANKRD36 WILD-TYPE    195    186    266
D43V8, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               1               195
  CLUS_2               4               186
  CLUS_3               2               266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD36 MUTATED        1      1      3      2
  ANKRD36 WILD-TYPE    135    106    180     81
D43V9, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               1               135
  CLUS_2               1               106
  CLUS_3               3               180
  CLUS_4               2                81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD36 MUTATED        3      3      1
  ANKRD36 WILD-TYPE    219    181    102
D43V10, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               3               219
  CLUS_2               3               181
  CLUS_3               1               102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD36 MUTATED        2      3      2
  ANKRD36 WILD-TYPE    182    159    157
D43V11, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               2               182
  CLUS_2               3               159
  CLUS_3               2               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD36 MUTATED        1      3      2      1
  ANKRD36 WILD-TYPE     89    135    186     88
D43V12, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               1                89
  CLUS_2               3               135
  CLUS_3               2               186
  CLUS_4               1                88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = SRPX MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPX MUTATED        0      0      0      0
  SRPX WILD-TYPE     69     43     74     54
D44V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPX MUTATED        0      0      0      0
  SRPX WILD-TYPE     63     50     48     79
D44V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPX MUTATED        0      0      0      0
  SRPX WILD-TYPE     77     93     45     60
D44V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SRPX MUTATED        0      0      0
  SRPX WILD-TYPE    138     61     76
D44V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SRPX MUTATED        2      2      0
  SRPX WILD-TYPE    293    479      7
D44V5, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            293
  CLUS_2            2            479
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPX MUTATED        2      0      0      2
  SRPX WILD-TYPE    158    232     64    164
D44V6, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            158
  CLUS_2            0            232
  CLUS_3            0             64
  CLUS_4            2            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SRPX MUTATED        2      2      0
  SRPX WILD-TYPE    225    233    192
D44V7, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            225
  CLUS_2            2            233
  CLUS_3            0            192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SRPX MUTATED        2      0      2
  SRPX WILD-TYPE    194    190    266
D44V8, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            194
  CLUS_2            0            190
  CLUS_3            2            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPX MUTATED        2      1      0      1
  SRPX WILD-TYPE    134    106    183     82
D44V9, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            134
  CLUS_2            1            106
  CLUS_3            0            183
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SRPX MUTATED        2      0      2
  SRPX WILD-TYPE    220    184    101
D44V10, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            220
  CLUS_2            0            184
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SRPX MUTATED        3      1      0
  SRPX WILD-TYPE    181    161    159
D44V11, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            3            181
  CLUS_2            1            161
  CLUS_3            0            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPX MUTATED        0      2      0      2
  SRPX WILD-TYPE     90    136    188     87
D44V12, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            0             90
  CLUS_2            2            136
  CLUS_3            0            188
  CLUS_4            2             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = FAM83D MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83D MUTATED        0      1      0      0
  FAM83D WILD-TYPE     69     42     74     54
D45V1, multiclass
[1] "Remove cluster labels:" "FAM83D MUTATED"        
clus
  FAM83D MUTATED FAM83D WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-76-4925 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83D MUTATED        0      1      0      0
  FAM83D WILD-TYPE     63     49     48     79
D45V2, multiclass
[1] "Remove cluster labels:" "FAM83D MUTATED"        
clus
  FAM83D MUTATED FAM83D WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-76-4925 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83D MUTATED        1      1      0      0
  FAM83D WILD-TYPE     76     92     45     60
D45V3, multiclass
[1] "Remove cluster labels:" "FAM83D MUTATED"        
clus
  FAM83D MUTATED FAM83D WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-87-5896 
"FAM83D WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83D MUTATED        2      0      0
  FAM83D WILD-TYPE    136     61     76
D45V4, multiclass
[1] "Remove cluster labels:" "FAM83D MUTATED"        
clus
  FAM83D MUTATED FAM83D WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-87-5896 
"FAM83D WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83D MUTATED        3      2      0
  FAM83D WILD-TYPE    292    479      7
D45V5, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              3              292
  CLUS_2              2              479
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83D MUTATED        3      1      0      1
  FAM83D WILD-TYPE    157    231     64    165
D45V6, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              3              157
  CLUS_2              1              231
  CLUS_3              0               64
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83D MUTATED        2      1      1
  FAM83D WILD-TYPE    225    234    191
D45V7, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              2              225
  CLUS_2              1              234
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83D MUTATED        2      1      1
  FAM83D WILD-TYPE    194    189    267
D45V8, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              2              194
  CLUS_2              1              189
  CLUS_3              1              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83D MUTATED        1      1      1      0
  FAM83D WILD-TYPE    135    106    182     83
D45V9, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              1              135
  CLUS_2              1              106
  CLUS_3              1              182
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83D MUTATED        0      1      2
  FAM83D WILD-TYPE    222    183    101
D45V10, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              0              222
  CLUS_2              1              183
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83D MUTATED        1      1      1
  FAM83D WILD-TYPE    183    161    158
D45V11, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              1              183
  CLUS_2              1              161
  CLUS_3              1              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83D MUTATED        0      1      1      1
  FAM83D WILD-TYPE     90    137    187     88
D45V12, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              0               90
  CLUS_2              1              137
  CLUS_3              1              187
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = AK7 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AK7 MUTATED        0      0      2      3
  AK7 WILD-TYPE     69     43     72     51
D46V1, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           0            69
  CLUS_2           0            43
  CLUS_3           2            72
  CLUS_4           3            51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AK7 MUTATED        0      0      1      4
  AK7 WILD-TYPE     63     50     47     75
D46V2, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           0            63
  CLUS_2           0            50
  CLUS_3           1            47
  CLUS_4           4            75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AK7 MUTATED        1      3      1      0
  AK7 WILD-TYPE     76     90     44     60
D46V3, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           1            76
  CLUS_2           3            90
  CLUS_3           1            44
  CLUS_4           0            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AK7 MUTATED        2      0      3
  AK7 WILD-TYPE    136     61     73
D46V4, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           2           136
  CLUS_2           0            61
  CLUS_3           3            73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AK7 MUTATED        7      2      0
  AK7 WILD-TYPE    288    479      7
D46V5, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           7           288
  CLUS_2           2           479
  CLUS_3           0             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AK7 MUTATED        4      1      0      0
  AK7 WILD-TYPE    156    231     64    166
D46V6, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           4           156
  CLUS_2           1           231
  CLUS_3           0            64
  CLUS_4           0           166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AK7 MUTATED        5      1      1
  AK7 WILD-TYPE    222    234    191
D46V7, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           5           222
  CLUS_2           1           234
  CLUS_3           1           191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AK7 MUTATED        5      1      1
  AK7 WILD-TYPE    191    189    267
D46V8, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           5           191
  CLUS_2           1           189
  CLUS_3           1           267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AK7 MUTATED        0      3      1      0
  AK7 WILD-TYPE    136    104    182     83
D46V9, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           0           136
  CLUS_2           3           104
  CLUS_3           1           182
  CLUS_4           0            83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AK7 MUTATED        0      0      4
  AK7 WILD-TYPE    222    184     99
D46V10, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           0           222
  CLUS_2           0           184
  CLUS_3           4            99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AK7 MUTATED        3      0      1
  AK7 WILD-TYPE    181    162    158
D46V11, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           3           181
  CLUS_2           0           162
  CLUS_3           1           158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AK7 MUTATED        0      0      0      4
  AK7 WILD-TYPE     90    138    188     85
D46V12, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           0            90
  CLUS_2           0           138
  CLUS_3           0           188
  CLUS_4           4            85
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = GAGE2D MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAGE2D MUTATED        0      0      0      0
  GAGE2D WILD-TYPE     69     43     74     54
D47V1, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAGE2D MUTATED        0      0      0      0
  GAGE2D WILD-TYPE     63     50     48     79
D47V2, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAGE2D MUTATED        0      0      0      0
  GAGE2D WILD-TYPE     77     93     45     60
D47V3, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GAGE2D MUTATED        0      0      0
  GAGE2D WILD-TYPE    138     61     76
D47V4, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GAGE2D MUTATED        1      4      0
  GAGE2D WILD-TYPE    294    477      7
D47V5, multiclass
        clus
vv       GAGE2D MUTATED GAGE2D WILD-TYPE
  CLUS_1              1              294
  CLUS_2              4              477
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAGE2D MUTATED        1      2      0      2
  GAGE2D WILD-TYPE    159    230     64    164
D47V6, multiclass
        clus
vv       GAGE2D MUTATED GAGE2D WILD-TYPE
  CLUS_1              1              159
  CLUS_2              2              230
  CLUS_3              0               64
  CLUS_4              2              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GAGE2D MUTATED        1      2      2
  GAGE2D WILD-TYPE    226    233    190
D47V7, multiclass
        clus
vv       GAGE2D MUTATED GAGE2D WILD-TYPE
  CLUS_1              1              226
  CLUS_2              2              233
  CLUS_3              2              190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GAGE2D MUTATED        1      2      2
  GAGE2D WILD-TYPE    195    188    266
D47V8, multiclass
        clus
vv       GAGE2D MUTATED GAGE2D WILD-TYPE
  CLUS_1              1              195
  CLUS_2              2              188
  CLUS_3              2              266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAGE2D MUTATED        1      2      2      0
  GAGE2D WILD-TYPE    135    105    181     83
D47V9, multiclass
        clus
vv       GAGE2D MUTATED GAGE2D WILD-TYPE
  CLUS_1              1              135
  CLUS_2              2              105
  CLUS_3              2              181
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GAGE2D MUTATED        2      2      1
  GAGE2D WILD-TYPE    220    182    102
D47V10, multiclass
        clus
vv       GAGE2D MUTATED GAGE2D WILD-TYPE
  CLUS_1              2              220
  CLUS_2              2              182
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GAGE2D MUTATED        1      2      2
  GAGE2D WILD-TYPE    183    160    157
D47V11, multiclass
        clus
vv       GAGE2D MUTATED GAGE2D WILD-TYPE
  CLUS_1              1              183
  CLUS_2              2              160
  CLUS_3              2              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAGE2D MUTATED        2      0      2      1
  GAGE2D WILD-TYPE     88    138    186     88
D47V12, multiclass
        clus
vv       GAGE2D MUTATED GAGE2D WILD-TYPE
  CLUS_1              2               88
  CLUS_2              0              138
  CLUS_3              2              186
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = SETD2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        0      3      0      0
  SETD2 WILD-TYPE     69     40     74     54
D48V1, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             0              69
  CLUS_2             3              40
  CLUS_3             0              74
  CLUS_4             0              54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        2      1      0      0
  SETD2 WILD-TYPE     61     49     48     79
D48V2, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             2              61
  CLUS_2             1              49
  CLUS_3             0              48
  CLUS_4             0              79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        1      0      1      1
  SETD2 WILD-TYPE     76     93     44     59
D48V3, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             1              76
  CLUS_2             0              93
  CLUS_3             1              44
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED        2      0      1
  SETD2 WILD-TYPE    136     61     75
D48V4, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             2             136
  CLUS_2             0              61
  CLUS_3             1              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED        6      7      0
  SETD2 WILD-TYPE    289    474      7
D48V5, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             6             289
  CLUS_2             7             474
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        7      3      1      2
  SETD2 WILD-TYPE    153    229     63    164
D48V6, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             7             153
  CLUS_2             3             229
  CLUS_3             1              63
  CLUS_4             2             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED        8      2      3
  SETD2 WILD-TYPE    219    233    189
D48V7, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             8             219
  CLUS_2             2             233
  CLUS_3             3             189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED        5      5      3
  SETD2 WILD-TYPE    191    185    265
D48V8, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             5             191
  CLUS_2             5             185
  CLUS_3             3             265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        2      4      3      1
  SETD2 WILD-TYPE    134    103    180     82
D48V9, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             2             134
  CLUS_2             4             103
  CLUS_3             3             180
  CLUS_4             1              82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED        3      2      5
  SETD2 WILD-TYPE    219    182     98
D48V10, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             3             219
  CLUS_2             2             182
  CLUS_3             5              98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED        3      3      4
  SETD2 WILD-TYPE    181    159    155
D48V11, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             3             181
  CLUS_2             3             159
  CLUS_3             4             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        1      2      3      4
  SETD2 WILD-TYPE     89    136    185     85
D48V12, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             1              89
  CLUS_2             2             136
  CLUS_3             3             185
  CLUS_4             4              85
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = HDAC2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HDAC2 MUTATED        1      0      1      1
  HDAC2 WILD-TYPE     68     43     73     53
D49V1, multiclass
        clus
vv       HDAC2 MUTATED HDAC2 WILD-TYPE
  CLUS_1             1              68
  CLUS_2             0              43
  CLUS_3             1              73
  CLUS_4             1              53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HDAC2 MUTATED        0      0      0      3
  HDAC2 WILD-TYPE     63     50     48     76
D49V2, multiclass
        clus
vv       HDAC2 MUTATED HDAC2 WILD-TYPE
  CLUS_1             0              63
  CLUS_2             0              50
  CLUS_3             0              48
  CLUS_4             3              76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HDAC2 MUTATED        1      0      1      1
  HDAC2 WILD-TYPE     76     93     44     59
D49V3, multiclass
        clus
vv       HDAC2 MUTATED HDAC2 WILD-TYPE
  CLUS_1             1              76
  CLUS_2             0              93
  CLUS_3             1              44
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HDAC2 MUTATED        1      2      0
  HDAC2 WILD-TYPE    137     59     76
D49V4, multiclass
        clus
vv       HDAC2 MUTATED HDAC2 WILD-TYPE
  CLUS_1             1             137
  CLUS_2             2              59
  CLUS_3             0              76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HDAC2 MUTATED        3      4      0
  HDAC2 WILD-TYPE    292    477      7
D49V5, multiclass
        clus
vv       HDAC2 MUTATED HDAC2 WILD-TYPE
  CLUS_1             3             292
  CLUS_2             4             477
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HDAC2 MUTATED        2      0      0      3
  HDAC2 WILD-TYPE    158    232     64    163
D49V6, multiclass
        clus
vv       HDAC2 MUTATED HDAC2 WILD-TYPE
  CLUS_1             2             158
  CLUS_2             0             232
  CLUS_3             0              64
  CLUS_4             3             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HDAC2 MUTATED        3      1      2
  HDAC2 WILD-TYPE    224    234    190
D49V7, multiclass
        clus
vv       HDAC2 MUTATED HDAC2 WILD-TYPE
  CLUS_1             3             224
  CLUS_2             1             234
  CLUS_3             2             190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HDAC2 MUTATED        2      1      3
  HDAC2 WILD-TYPE    194    189    265
D49V8, multiclass
        clus
vv       HDAC2 MUTATED HDAC2 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             1             189
  CLUS_3             3             265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HDAC2 MUTATED        0      1      1      2
  HDAC2 WILD-TYPE    136    106    182     81
D49V9, multiclass
        clus
vv       HDAC2 MUTATED HDAC2 WILD-TYPE
  CLUS_1             0             136
  CLUS_2             1             106
  CLUS_3             1             182
  CLUS_4             2              81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HDAC2 MUTATED        1      2      1
  HDAC2 WILD-TYPE    221    182    102
D49V10, multiclass
        clus
vv       HDAC2 MUTATED HDAC2 WILD-TYPE
  CLUS_1             1             221
  CLUS_2             2             182
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HDAC2 MUTATED        1      0      3
  HDAC2 WILD-TYPE    183    162    156
D49V11, multiclass
        clus
vv       HDAC2 MUTATED HDAC2 WILD-TYPE
  CLUS_1             1             183
  CLUS_2             0             162
  CLUS_3             3             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HDAC2 MUTATED        0      0      4      0
  HDAC2 WILD-TYPE     90    138    184     89
D49V12, multiclass
        clus
vv       HDAC2 MUTATED HDAC2 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             0             138
  CLUS_3             4             184
  CLUS_4             0              89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = TYRP1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRP1 MUTATED        0      0      1      1
  TYRP1 WILD-TYPE     69     43     73     53
D50V1, multiclass
[1] "Remove cluster labels:" "TYRP1 MUTATED"         
clus
  TYRP1 MUTATED TYRP1 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-15-0742      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1838 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-2502 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-2509      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRP1 MUTATED        0      2      0      0
  TYRP1 WILD-TYPE     63     48     48     79
D50V2, multiclass
[1] "Remove cluster labels:" "TYRP1 MUTATED"         
clus
  TYRP1 MUTATED TYRP1 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-15-0742      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1838 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-2502 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-2509      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRP1 MUTATED        0      2      0      0
  TYRP1 WILD-TYPE     77     91     45     60
D50V3, multiclass
[1] "Remove cluster labels:" "TYRP1 MUTATED"         
clus
  TYRP1 MUTATED TYRP1 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-87-5896 
"TYRP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRP1 MUTATED        2      0      0
  TYRP1 WILD-TYPE    136     61     76
D50V4, multiclass
[1] "Remove cluster labels:" "TYRP1 MUTATED"         
clus
  TYRP1 MUTATED TYRP1 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-87-5896 
"TYRP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRP1 MUTATED        2      4      0
  TYRP1 WILD-TYPE    293    477      7
D50V5, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             2             293
  CLUS_2             4             477
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRP1 MUTATED        2      2      0      1
  TYRP1 WILD-TYPE    158    230     64    165
D50V6, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             2             158
  CLUS_2             2             230
  CLUS_3             0              64
  CLUS_4             1             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRP1 MUTATED        3      2      1
  TYRP1 WILD-TYPE    224    233    191
D50V7, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             3             224
  CLUS_2             2             233
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRP1 MUTATED        2      3      1
  TYRP1 WILD-TYPE    194    187    267
D50V8, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             3             187
  CLUS_3             1             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRP1 MUTATED        0      2      2      0
  TYRP1 WILD-TYPE    136    105    181     83
D50V9, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             0             136
  CLUS_2             2             105
  CLUS_3             2             181
  CLUS_4             0              83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRP1 MUTATED        1      1      2
  TYRP1 WILD-TYPE    221    183    101
D50V10, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             1             221
  CLUS_2             1             183
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRP1 MUTATED        1      1      2
  TYRP1 WILD-TYPE    183    161    157
D50V11, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             1             183
  CLUS_2             1             161
  CLUS_3             2             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRP1 MUTATED        0      0      3      1
  TYRP1 WILD-TYPE     90    138    185     88
D50V12, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             0             138
  CLUS_3             3             185
  CLUS_4             1              88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = BCOR MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED        1      1      2      3
  BCOR WILD-TYPE     68     42     72     51
D51V1, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            1             68
  CLUS_2            1             42
  CLUS_3            2             72
  CLUS_4            3             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED        0      2      2      3
  BCOR WILD-TYPE     63     48     46     76
D51V2, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            0             63
  CLUS_2            2             48
  CLUS_3            2             46
  CLUS_4            3             76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED        0      2      3      2
  BCOR WILD-TYPE     77     91     42     58
D51V3, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            0             77
  CLUS_2            2             91
  CLUS_3            3             42
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED        5      1      1
  BCOR WILD-TYPE    133     60     75
D51V4, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            5            133
  CLUS_2            1             60
  CLUS_3            1             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED        8     14      0
  BCOR WILD-TYPE    287    467      7
D51V5, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            8            287
  CLUS_2           14            467
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED        4      5      1      7
  BCOR WILD-TYPE    156    227     63    159
D51V6, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            4            156
  CLUS_2            5            227
  CLUS_3            1             63
  CLUS_4            7            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED        5      4      8
  BCOR WILD-TYPE    222    231    184
D51V7, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            5            222
  CLUS_2            4            231
  CLUS_3            8            184
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED        3      4     10
  BCOR WILD-TYPE    193    186    258
D51V8, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            3            193
  CLUS_2            4            186
  CLUS_3           10            258
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED        5      3      6      1
  BCOR WILD-TYPE    131    104    177     82
D51V9, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            5            131
  CLUS_2            3            104
  CLUS_3            6            177
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED        5      6      4
  BCOR WILD-TYPE    217    178     99
D51V10, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            5            217
  CLUS_2            6            178
  CLUS_3            4             99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED        4      6      5
  BCOR WILD-TYPE    180    156    154
D51V11, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            4            180
  CLUS_2            6            156
  CLUS_3            5            154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED        2      5      6      2
  BCOR WILD-TYPE     88    133    182     87
D51V12, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            2             88
  CLUS_2            5            133
  CLUS_3            6            182
  CLUS_4            2             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = PDGFRA MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRA MUTATED        1      6      3      1
  PDGFRA WILD-TYPE     68     37     71     53
D52V1, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              1               68
  CLUS_2              6               37
  CLUS_3              3               71
  CLUS_4              1               53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRA MUTATED        1      5      3      2
  PDGFRA WILD-TYPE     62     45     45     77
D52V2, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              1               62
  CLUS_2              5               45
  CLUS_3              3               45
  CLUS_4              2               77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRA MUTATED        5      3      2      2
  PDGFRA WILD-TYPE     72     90     43     58
D52V3, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              5               72
  CLUS_2              3               90
  CLUS_3              2               43
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRA MUTATED       10      1      1
  PDGFRA WILD-TYPE    128     60     75
D52V4, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1             10              128
  CLUS_2              1               60
  CLUS_3              1               75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRA MUTATED       10     11      0
  PDGFRA WILD-TYPE    285    470      7
D52V5, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1             10              285
  CLUS_2             11              470
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRA MUTATED        7      4      0      2
  PDGFRA WILD-TYPE    153    228     64    164
D52V6, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              7              153
  CLUS_2              4              228
  CLUS_3              0               64
  CLUS_4              2              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRA MUTATED       13      3      1
  PDGFRA WILD-TYPE    214    232    191
D52V7, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1             13              214
  CLUS_2              3              232
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRA MUTATED       10      5      2
  PDGFRA WILD-TYPE    186    185    266
D52V8, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1             10              186
  CLUS_2              5              185
  CLUS_3              2              266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRA MUTATED        1      7      0      2
  PDGFRA WILD-TYPE    135    100    183     81
D52V9, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              1              135
  CLUS_2              7              100
  CLUS_3              0              183
  CLUS_4              2               81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRA MUTATED        2      1      7
  PDGFRA WILD-TYPE    220    183     96
D52V10, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              2              220
  CLUS_2              1              183
  CLUS_3              7               96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRA MUTATED        3      3      4
  PDGFRA WILD-TYPE    181    159    155
D52V11, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              3              181
  CLUS_2              3              159
  CLUS_3              4              155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRA MUTATED        0      2      4      4
  PDGFRA WILD-TYPE     90    136    184     85
D52V12, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              0               90
  CLUS_2              2              136
  CLUS_3              4              184
  CLUS_4              4               85
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = FAM47C MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM47C MUTATED        0      0      2      1
  FAM47C WILD-TYPE     69     43     72     53
D53V1, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              0               69
  CLUS_2              0               43
  CLUS_3              2               72
  CLUS_4              1               53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM47C MUTATED        0      1      2      0
  FAM47C WILD-TYPE     63     49     46     79
D53V2, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              0               63
  CLUS_2              1               49
  CLUS_3              2               46
  CLUS_4              0               79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM47C MUTATED        1      2      2      0
  FAM47C WILD-TYPE     76     91     43     60
D53V3, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              1               76
  CLUS_2              2               91
  CLUS_3              2               43
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM47C MUTATED        2      1      2
  FAM47C WILD-TYPE    136     60     74
D53V4, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              2              136
  CLUS_2              1               60
  CLUS_3              2               74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM47C MUTATED        5     17      0
  FAM47C WILD-TYPE    290    464      7
D53V5, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              5              290
  CLUS_2             17              464
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM47C MUTATED        3      7      3      7
  FAM47C WILD-TYPE    157    225     61    159
D53V6, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              3              157
  CLUS_2              7              225
  CLUS_3              3               61
  CLUS_4              7              159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM47C MUTATED        5      4     11
  FAM47C WILD-TYPE    222    231    181
D53V7, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              5              222
  CLUS_2              4              231
  CLUS_3             11              181
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM47C MUTATED        4      1     15
  FAM47C WILD-TYPE    192    189    253
D53V8, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              4              192
  CLUS_2              1              189
  CLUS_3             15              253
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM47C MUTATED        3      4      9      2
  FAM47C WILD-TYPE    133    103    174     81
D53V9, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              3              133
  CLUS_2              4              103
  CLUS_3              9              174
  CLUS_4              2               81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM47C MUTATED        5     11      2
  FAM47C WILD-TYPE    217    173    101
D53V10, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              5              217
  CLUS_2             11              173
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM47C MUTATED        3      3     12
  FAM47C WILD-TYPE    181    159    147
D53V11, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              3              181
  CLUS_2              3              159
  CLUS_3             12              147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM47C MUTATED        0      3     14      1
  FAM47C WILD-TYPE     90    135    174     88
D53V12, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              0               90
  CLUS_2              3              135
  CLUS_3             14              174
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = NEU2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEU2 MUTATED        1      0      0      2
  NEU2 WILD-TYPE     68     43     74     52
D54V1, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            1             68
  CLUS_2            0             43
  CLUS_3            0             74
  CLUS_4            2             52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEU2 MUTATED        0      1      0      2
  NEU2 WILD-TYPE     63     49     48     77
D54V2, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            0             63
  CLUS_2            1             49
  CLUS_3            0             48
  CLUS_4            2             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEU2 MUTATED        1      1      1      0
  NEU2 WILD-TYPE     76     92     44     60
D54V3, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            1             76
  CLUS_2            1             92
  CLUS_3            1             44
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEU2 MUTATED        2      0      1
  NEU2 WILD-TYPE    136     61     75
D54V4, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            2            136
  CLUS_2            0             61
  CLUS_3            1             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEU2 MUTATED        3      5      0
  NEU2 WILD-TYPE    292    476      7
D54V5, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            3            292
  CLUS_2            5            476
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEU2 MUTATED        1      3      0      1
  NEU2 WILD-TYPE    159    229     64    165
D54V6, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            1            159
  CLUS_2            3            229
  CLUS_3            0             64
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEU2 MUTATED        2      3      2
  NEU2 WILD-TYPE    225    232    190
D54V7, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            2            225
  CLUS_2            3            232
  CLUS_3            2            190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEU2 MUTATED        3      3      1
  NEU2 WILD-TYPE    193    187    267
D54V8, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            3            193
  CLUS_2            3            187
  CLUS_3            1            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEU2 MUTATED        0      1      2      2
  NEU2 WILD-TYPE    136    106    181     81
D54V9, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            0            136
  CLUS_2            1            106
  CLUS_3            2            181
  CLUS_4            2             81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEU2 MUTATED        2      2      1
  NEU2 WILD-TYPE    220    182    102
D54V10, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            2            220
  CLUS_2            2            182
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEU2 MUTATED        1      1      3
  NEU2 WILD-TYPE    183    161    156
D54V11, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            1            183
  CLUS_2            1            161
  CLUS_3            3            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEU2 MUTATED        0      1      3      1
  NEU2 WILD-TYPE     90    137    185     88
D54V12, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            1            137
  CLUS_3            3            185
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = SERPING1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        0      0      0      0
  SERPING1 WILD-TYPE     69     43     74     54
D55V1, multiclass
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        0      0      0      0
  SERPING1 WILD-TYPE     63     50     48     79
D55V2, multiclass
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        0      0      1      0
  SERPING1 WILD-TYPE     77     93     44     60
D55V3, multiclass
[1] "Remove cluster labels:" "SERPING1 MUTATED"      
clus
  SERPING1 MUTATED SERPING1 WILD-TYPE 
                 1                274 
        TCGA-02-0003         TCGA-02-0033         TCGA-02-0047 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-02-0055         TCGA-02-2470         TCGA-02-2483 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-02-2485         TCGA-02-2486         TCGA-06-0122 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0124         TCGA-06-0126         TCGA-06-0128 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0129         TCGA-06-0130         TCGA-06-0137 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0139         TCGA-06-0140         TCGA-06-0141 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0142         TCGA-06-0145         TCGA-06-0151 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0152         TCGA-06-0154         TCGA-06-0155 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0157         TCGA-06-0158         TCGA-06-0166 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0168         TCGA-06-0169         TCGA-06-0173 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0174         TCGA-06-0178         TCGA-06-0184 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0185         TCGA-06-0188         TCGA-06-0189 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0192         TCGA-06-0195         TCGA-06-0213 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0214         TCGA-06-0216         TCGA-06-0219 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0237         TCGA-06-0238         TCGA-06-0240 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0241         TCGA-06-0644         TCGA-06-0645 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0646         TCGA-06-0648         TCGA-06-0649 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0650         TCGA-06-0686         TCGA-06-0743 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0744         TCGA-06-0745         TCGA-06-0747 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0749         TCGA-06-0750         TCGA-06-0875 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0876         TCGA-06-0877         TCGA-06-0878 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0879         TCGA-06-0881         TCGA-06-0882 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0939         TCGA-06-1804         TCGA-06-1806 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2557         TCGA-06-2558         TCGA-06-2559 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2561         TCGA-06-2562         TCGA-06-2563 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2564         TCGA-06-2565         TCGA-06-2567 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2569         TCGA-06-2570         TCGA-06-5408 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5410         TCGA-06-5411         TCGA-06-5412 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5413         TCGA-06-5414         TCGA-06-5415 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5417         TCGA-06-5418         TCGA-06-5856 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5858         TCGA-06-5859         TCGA-06-6388 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6389         TCGA-06-6390         TCGA-06-6391 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6693         TCGA-06-6694         TCGA-06-6695 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6697         TCGA-06-6698         TCGA-06-6699 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6700         TCGA-06-6701         TCGA-08-0386 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-0616         TCGA-12-0618         TCGA-12-0619 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-0688         TCGA-12-0692         TCGA-12-0821 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-1597         TCGA-12-3649         TCGA-12-3650 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-3652         TCGA-12-3653         TCGA-12-5295 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-5299         TCGA-12-5301         TCGA-14-0740 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-0781         TCGA-14-0786         TCGA-14-0787 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-0789         TCGA-14-0790         TCGA-14-0813 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-0817         TCGA-14-0862         TCGA-14-0871 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-1043         TCGA-14-1395         TCGA-14-1450 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-1456         TCGA-14-1823         TCGA-14-1825 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-1829         TCGA-14-2554         TCGA-14-3476 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-4157         TCGA-15-0742         TCGA-15-1444 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-16-0846         TCGA-16-0861         TCGA-16-1045 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-16-1048         TCGA-19-1390         TCGA-19-1790 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-2619         TCGA-19-2620         TCGA-19-2623 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-2624         TCGA-19-2625         TCGA-19-2629 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-2631         TCGA-19-4068         TCGA-19-5947 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-5950         TCGA-19-5951         TCGA-19-5952 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-5953         TCGA-19-5954         TCGA-19-5955 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-5958         TCGA-19-5959         TCGA-19-5960 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-1439         TCGA-26-1442         TCGA-26-5132 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-5133         TCGA-26-5134         TCGA-26-5135 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-5136         TCGA-26-5139         TCGA-26-6173 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-6174         TCGA-27-1830         TCGA-27-1831 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-1832         TCGA-27-1833         TCGA-27-1834 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-1835         TCGA-27-1836         TCGA-27-1837 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-1838         TCGA-27-2518         TCGA-27-2519 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-2521         TCGA-27-2523         TCGA-27-2524 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-2526         TCGA-27-2527         TCGA-27-2528 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-1747         TCGA-28-1753         TCGA-28-2502 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-2509         TCGA-28-2510         TCGA-28-2513 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-2514         TCGA-28-5204         TCGA-28-5207 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5208         TCGA-28-5209         TCGA-28-5211 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5213         TCGA-28-5214         TCGA-28-5215 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5216         TCGA-28-5218         TCGA-28-5219 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5220         TCGA-28-6450         TCGA-32-1970 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-1977         TCGA-32-1979         TCGA-32-1980 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-1982         TCGA-32-1986         TCGA-32-1991 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-2491         TCGA-32-2494         TCGA-32-2495 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-2615         TCGA-32-2632         TCGA-32-2634 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-2638         TCGA-32-4208         TCGA-32-4209 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-4210         TCGA-32-4211         TCGA-32-4213 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-4719         TCGA-32-5222         TCGA-41-2571 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-41-2572         TCGA-41-2573         TCGA-41-2575 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-41-3392         TCGA-41-3393         TCGA-41-3915 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-41-4097         TCGA-41-5651         TCGA-41-6646 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-74-6573         TCGA-74-6577         TCGA-74-6578 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-74-6584         TCGA-76-4925         TCGA-76-4926 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-4927         TCGA-76-4928         TCGA-76-4929 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-4931         TCGA-76-4932         TCGA-76-4934 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-4935         TCGA-76-6191         TCGA-76-6192 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6193         TCGA-76-6280         TCGA-76-6282 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6283         TCGA-76-6285         TCGA-76-6286 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6656         TCGA-76-6657         TCGA-76-6660 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6661         TCGA-76-6662         TCGA-76-6663 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6664         TCGA-81-5910         TCGA-81-5911 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-87-5896 
"SERPING1 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        0      0      1
  SERPING1 WILD-TYPE    138     61     75
D55V4, multiclass
[1] "Remove cluster labels:" "SERPING1 MUTATED"      
clus
  SERPING1 MUTATED SERPING1 WILD-TYPE 
                 1                274 
        TCGA-02-0003         TCGA-02-0033         TCGA-02-0047 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-02-0055         TCGA-02-2470         TCGA-02-2483 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-02-2485         TCGA-02-2486         TCGA-06-0122 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0124         TCGA-06-0126         TCGA-06-0128 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0129         TCGA-06-0130         TCGA-06-0137 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0139         TCGA-06-0140         TCGA-06-0141 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0142         TCGA-06-0145         TCGA-06-0151 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0152         TCGA-06-0154         TCGA-06-0155 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0157         TCGA-06-0158         TCGA-06-0166 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0168         TCGA-06-0169         TCGA-06-0173 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0174         TCGA-06-0178         TCGA-06-0184 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0185         TCGA-06-0188         TCGA-06-0189 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0192         TCGA-06-0195         TCGA-06-0213 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0214         TCGA-06-0216         TCGA-06-0219 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0237         TCGA-06-0238         TCGA-06-0240 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0241         TCGA-06-0644         TCGA-06-0645 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0646         TCGA-06-0648         TCGA-06-0649 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0650         TCGA-06-0686         TCGA-06-0743 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0744         TCGA-06-0745         TCGA-06-0747 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0749         TCGA-06-0750         TCGA-06-0875 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0876         TCGA-06-0877         TCGA-06-0878 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0879         TCGA-06-0881         TCGA-06-0882 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0939         TCGA-06-1804         TCGA-06-1806 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2557         TCGA-06-2558         TCGA-06-2559 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2561         TCGA-06-2562         TCGA-06-2563 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2564         TCGA-06-2565         TCGA-06-2567 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2569         TCGA-06-2570         TCGA-06-5408 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5410         TCGA-06-5411         TCGA-06-5412 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5413         TCGA-06-5414         TCGA-06-5415 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5417         TCGA-06-5418         TCGA-06-5856 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5858         TCGA-06-5859         TCGA-06-6388 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6389         TCGA-06-6390         TCGA-06-6391 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6693         TCGA-06-6694         TCGA-06-6695 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6697         TCGA-06-6698         TCGA-06-6699 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6700         TCGA-06-6701         TCGA-08-0386 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-0616         TCGA-12-0618         TCGA-12-0619 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-0688         TCGA-12-0692         TCGA-12-0821 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-1597         TCGA-12-3649         TCGA-12-3650 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-3652         TCGA-12-3653         TCGA-12-5295 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-5299         TCGA-12-5301         TCGA-14-0740 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-0781         TCGA-14-0786         TCGA-14-0787 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-0789         TCGA-14-0790         TCGA-14-0813 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-0817         TCGA-14-0862         TCGA-14-0871 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-1043         TCGA-14-1395         TCGA-14-1450 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-1456         TCGA-14-1823         TCGA-14-1825 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-1829         TCGA-14-2554         TCGA-14-3476 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-4157         TCGA-15-0742         TCGA-15-1444 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-16-0846         TCGA-16-0861         TCGA-16-1045 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-16-1048         TCGA-19-1390         TCGA-19-1790 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-2619         TCGA-19-2620         TCGA-19-2623 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-2624         TCGA-19-2625         TCGA-19-2629 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-2631         TCGA-19-4068         TCGA-19-5947 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-5950         TCGA-19-5951         TCGA-19-5952 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-5953         TCGA-19-5954         TCGA-19-5955 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-5958         TCGA-19-5959         TCGA-19-5960 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-1439         TCGA-26-1442         TCGA-26-5132 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-5133         TCGA-26-5134         TCGA-26-5135 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-5136         TCGA-26-5139         TCGA-26-6173 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-6174         TCGA-27-1830         TCGA-27-1831 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-1832         TCGA-27-1833         TCGA-27-1834 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-1835         TCGA-27-1836         TCGA-27-1837 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-1838         TCGA-27-2518         TCGA-27-2519 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-2521         TCGA-27-2523         TCGA-27-2524 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-2526         TCGA-27-2527         TCGA-27-2528 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-1747         TCGA-28-1753         TCGA-28-2502 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-2509         TCGA-28-2510         TCGA-28-2513 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-2514         TCGA-28-5204         TCGA-28-5207 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5208         TCGA-28-5209         TCGA-28-5211 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5213         TCGA-28-5214         TCGA-28-5215 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5216         TCGA-28-5218         TCGA-28-5219 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5220         TCGA-28-6450         TCGA-32-1970 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-1977         TCGA-32-1979         TCGA-32-1980 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-1982         TCGA-32-1986         TCGA-32-1991 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-2491         TCGA-32-2494         TCGA-32-2495 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-2615         TCGA-32-2632         TCGA-32-2634 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-2638         TCGA-32-4208         TCGA-32-4209 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-4210         TCGA-32-4211         TCGA-32-4213 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-4719         TCGA-32-5222         TCGA-41-2571 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-41-2572         TCGA-41-2573         TCGA-41-2575 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-41-3392         TCGA-41-3393         TCGA-41-3915 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-41-4097         TCGA-41-5651         TCGA-41-6646 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-74-6573         TCGA-74-6577         TCGA-74-6578 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-74-6584         TCGA-76-4925         TCGA-76-4926 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-4927         TCGA-76-4928         TCGA-76-4929 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-4931         TCGA-76-4932         TCGA-76-4934 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-4935         TCGA-76-6191         TCGA-76-6192 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6193         TCGA-76-6280         TCGA-76-6282 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6283         TCGA-76-6285         TCGA-76-6286 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6656         TCGA-76-6657         TCGA-76-6660 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6661         TCGA-76-6662         TCGA-76-6663 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6664         TCGA-81-5910         TCGA-81-5911 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-87-5896 
"SERPING1 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        2      2      0
  SERPING1 WILD-TYPE    293    479      7
D55V5, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                2                293
  CLUS_2                2                479
  CLUS_3                0                  7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        2      1      0      1
  SERPING1 WILD-TYPE    158    231     64    165
D55V6, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                2                158
  CLUS_2                1                231
  CLUS_3                0                 64
  CLUS_4                1                165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        0      1      2
  SERPING1 WILD-TYPE    227    234    190
D55V7, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                0                227
  CLUS_2                1                234
  CLUS_3                2                190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        0      1      2
  SERPING1 WILD-TYPE    196    189    266
D55V8, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                0                196
  CLUS_2                1                189
  CLUS_3                2                266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        0      1      2      0
  SERPING1 WILD-TYPE    136    106    181     83
D55V9, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                0                136
  CLUS_2                1                106
  CLUS_3                2                181
  CLUS_4                0                 83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        1      2      0
  SERPING1 WILD-TYPE    221    182    103
D55V10, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                1                221
  CLUS_2                2                182
  CLUS_3                0                103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        1      0      2
  SERPING1 WILD-TYPE    183    162    157
D55V11, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                1                183
  CLUS_2                0                162
  CLUS_3                2                157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        1      0      2      0
  SERPING1 WILD-TYPE     89    138    186     89
D55V12, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                1                 89
  CLUS_2                0                138
  CLUS_3                2                186
  CLUS_4                0                 89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = HTRA2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTRA2 MUTATED        0      0      0      0
  HTRA2 WILD-TYPE     69     43     74     54
D56V1, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTRA2 MUTATED        0      0      0      0
  HTRA2 WILD-TYPE     63     50     48     79
D56V2, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTRA2 MUTATED        0      0      0      0
  HTRA2 WILD-TYPE     77     93     45     60
D56V3, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTRA2 MUTATED        0      0      0
  HTRA2 WILD-TYPE    138     61     76
D56V4, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTRA2 MUTATED        0      5      0
  HTRA2 WILD-TYPE    295    476      7
D56V5, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             0             295
  CLUS_2             5             476
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTRA2 MUTATED        0      3      1      1
  HTRA2 WILD-TYPE    160    229     63    165
D56V6, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             0             160
  CLUS_2             3             229
  CLUS_3             1              63
  CLUS_4             1             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTRA2 MUTATED        1      2      2
  HTRA2 WILD-TYPE    226    233    190
D56V7, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             1             226
  CLUS_2             2             233
  CLUS_3             2             190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTRA2 MUTATED        1      2      2
  HTRA2 WILD-TYPE    195    188    266
D56V8, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             2             188
  CLUS_3             2             266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTRA2 MUTATED        3      0      1      1
  HTRA2 WILD-TYPE    133    107    182     82
D56V9, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             3             133
  CLUS_2             0             107
  CLUS_3             1             182
  CLUS_4             1              82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTRA2 MUTATED        3      2      0
  HTRA2 WILD-TYPE    219    182    103
D56V10, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             3             219
  CLUS_2             2             182
  CLUS_3             0             103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTRA2 MUTATED        2      2      0
  HTRA2 WILD-TYPE    182    160    159
D56V11, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             2             182
  CLUS_2             2             160
  CLUS_3             0             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTRA2 MUTATED        2      1      1      0
  HTRA2 WILD-TYPE     88    137    187     89
D56V12, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             2              88
  CLUS_2             1             137
  CLUS_3             1             187
  CLUS_4             0              89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = NOTCH2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH2 MUTATED        1      0      2      0
  NOTCH2 WILD-TYPE     68     43     72     54
D57V1, multiclass
        clus
vv       NOTCH2 MUTATED NOTCH2 WILD-TYPE
  CLUS_1              1               68
  CLUS_2              0               43
  CLUS_3              2               72
  CLUS_4              0               54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH2 MUTATED        0      0      2      1
  NOTCH2 WILD-TYPE     63     50     46     78
D57V2, multiclass
        clus
vv       NOTCH2 MUTATED NOTCH2 WILD-TYPE
  CLUS_1              0               63
  CLUS_2              0               50
  CLUS_3              2               46
  CLUS_4              1               78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH2 MUTATED        4      0      0      1
  NOTCH2 WILD-TYPE     73     93     45     59
D57V3, multiclass
        clus
vv       NOTCH2 MUTATED NOTCH2 WILD-TYPE
  CLUS_1              4               73
  CLUS_2              0               93
  CLUS_3              0               45
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH2 MUTATED        0      1      4
  NOTCH2 WILD-TYPE    138     60     72
D57V4, multiclass
        clus
vv       NOTCH2 MUTATED NOTCH2 WILD-TYPE
  CLUS_1              0              138
  CLUS_2              1               60
  CLUS_3              4               72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH2 MUTATED        6      7      0
  NOTCH2 WILD-TYPE    289    474      7
D57V5, multiclass
        clus
vv       NOTCH2 MUTATED NOTCH2 WILD-TYPE
  CLUS_1              6              289
  CLUS_2              7              474
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH2 MUTATED        4      5      0      1
  NOTCH2 WILD-TYPE    156    227     64    165
D57V6, multiclass
        clus
vv       NOTCH2 MUTATED NOTCH2 WILD-TYPE
  CLUS_1              4              156
  CLUS_2              5              227
  CLUS_3              0               64
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH2 MUTATED        4      4      2
  NOTCH2 WILD-TYPE    223    231    190
D57V7, multiclass
        clus
vv       NOTCH2 MUTATED NOTCH2 WILD-TYPE
  CLUS_1              4              223
  CLUS_2              4              231
  CLUS_3              2              190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH2 MUTATED        3      5      2
  NOTCH2 WILD-TYPE    193    185    266
D57V8, multiclass
        clus
vv       NOTCH2 MUTATED NOTCH2 WILD-TYPE
  CLUS_1              3              193
  CLUS_2              5              185
  CLUS_3              2              266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH2 MUTATED        2      4      1      1
  NOTCH2 WILD-TYPE    134    103    182     82
D57V9, multiclass
        clus
vv       NOTCH2 MUTATED NOTCH2 WILD-TYPE
  CLUS_1              2              134
  CLUS_2              4              103
  CLUS_3              1              182
  CLUS_4              1               82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH2 MUTATED        5      0      3
  NOTCH2 WILD-TYPE    217    184    100
D57V10, multiclass
        clus
vv       NOTCH2 MUTATED NOTCH2 WILD-TYPE
  CLUS_1              5              217
  CLUS_2              0              184
  CLUS_3              3              100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH2 MUTATED        5      2      1
  NOTCH2 WILD-TYPE    179    160    158
D57V11, multiclass
        clus
vv       NOTCH2 MUTATED NOTCH2 WILD-TYPE
  CLUS_1              5              179
  CLUS_2              2              160
  CLUS_3              1              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH2 MUTATED        3      2      2      1
  NOTCH2 WILD-TYPE     87    136    186     88
D57V12, multiclass
        clus
vv       NOTCH2 MUTATED NOTCH2 WILD-TYPE
  CLUS_1              3               87
  CLUS_2              2              136
  CLUS_3              2              186
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = NKD2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        0      0      0      0
  NKD2 WILD-TYPE     69     43     74     54
D58V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        0      0      0      0
  NKD2 WILD-TYPE     63     50     48     79
D58V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        0      0      0      0
  NKD2 WILD-TYPE     77     93     45     60
D58V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        0      0      0
  NKD2 WILD-TYPE    138     61     76
D58V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        1      3      0
  NKD2 WILD-TYPE    294    478      7
D58V5, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            1            294
  CLUS_2            3            478
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        1      2      0      1
  NKD2 WILD-TYPE    159    230     64    165
D58V6, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            1            159
  CLUS_2            2            230
  CLUS_3            0             64
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        1      3      0
  NKD2 WILD-TYPE    226    232    192
D58V7, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            1            226
  CLUS_2            3            232
  CLUS_3            0            192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        1      1      2
  NKD2 WILD-TYPE    195    189    266
D58V8, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            1            189
  CLUS_3            2            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        0      2      1      1
  NKD2 WILD-TYPE    136    105    182     82
D58V9, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            0            136
  CLUS_2            2            105
  CLUS_3            1            182
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        2      1      1
  NKD2 WILD-TYPE    220    183    102
D58V10, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            2            220
  CLUS_2            1            183
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        2      1      1
  NKD2 WILD-TYPE    182    161    158
D58V11, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            2            182
  CLUS_2            1            161
  CLUS_3            1            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        1      1      1      1
  NKD2 WILD-TYPE     89    137    187     88
D58V12, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            1             89
  CLUS_2            1            137
  CLUS_3            1            187
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = TPX2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPX2 MUTATED        0      0      1      0
  TPX2 WILD-TYPE     69     43     73     54
D59V1, multiclass
[1] "Remove cluster labels:" "TPX2 MUTATED"          
clus
  TPX2 MUTATED TPX2 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPX2 MUTATED        0      0      0      1
  TPX2 WILD-TYPE     63     50     48     78
D59V2, multiclass
[1] "Remove cluster labels:" "TPX2 MUTATED"          
clus
  TPX2 MUTATED TPX2 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPX2 MUTATED        0      0      1      1
  TPX2 WILD-TYPE     77     93     44     59
D59V3, multiclass
[1] "Remove cluster labels:" "TPX2 MUTATED"          
clus
  TPX2 MUTATED TPX2 WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5417     TCGA-06-5418 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-87-5896 
"TPX2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TPX2 MUTATED        1      1      0
  TPX2 WILD-TYPE    137     60     76
D59V4, multiclass
[1] "Remove cluster labels:" "TPX2 MUTATED"          
clus
  TPX2 MUTATED TPX2 WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5417     TCGA-06-5418 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-87-5896 
"TPX2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TPX2 MUTATED        2      5      0
  TPX2 WILD-TYPE    293    476      7
D59V5, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            2            293
  CLUS_2            5            476
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPX2 MUTATED        3      3      0      1
  TPX2 WILD-TYPE    157    229     64    165
D59V6, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            3            157
  CLUS_2            3            229
  CLUS_3            0             64
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TPX2 MUTATED        2      2      2
  TPX2 WILD-TYPE    225    233    190
D59V7, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            2            225
  CLUS_2            2            233
  CLUS_3            2            190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TPX2 MUTATED        1      3      2
  TPX2 WILD-TYPE    195    187    266
D59V8, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            3            187
  CLUS_3            2            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPX2 MUTATED        0      1      3      1
  TPX2 WILD-TYPE    136    106    180     82
D59V9, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            0            136
  CLUS_2            1            106
  CLUS_3            3            180
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TPX2 MUTATED        0      4      1
  TPX2 WILD-TYPE    222    180    102
D59V10, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            0            222
  CLUS_2            4            180
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TPX2 MUTATED        0      2      3
  TPX2 WILD-TYPE    184    160    156
D59V11, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            0            184
  CLUS_2            2            160
  CLUS_3            3            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPX2 MUTATED        0      1      4      0
  TPX2 WILD-TYPE     90    137    184     89
D59V12, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            1            137
  CLUS_3            4            184
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = ZNF512B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF512B MUTATED        0      0      0      0
  ZNF512B WILD-TYPE     69     43     74     54
D60V1, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF512B MUTATED        0      0      0      0
  ZNF512B WILD-TYPE     63     50     48     79
D60V2, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF512B MUTATED        0      0      0      0
  ZNF512B WILD-TYPE     77     93     45     60
D60V3, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZNF512B MUTATED        0      0      0
  ZNF512B WILD-TYPE    138     61     76
D60V4, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZNF512B MUTATED        0      5      0
  ZNF512B WILD-TYPE    295    476      7
D60V5, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               0               295
  CLUS_2               5               476
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF512B MUTATED        1      3      0      1
  ZNF512B WILD-TYPE    159    229     64    165
D60V6, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               1               159
  CLUS_2               3               229
  CLUS_3               0                64
  CLUS_4               1               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZNF512B MUTATED        1      2      2
  ZNF512B WILD-TYPE    226    233    190
D60V7, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               1               226
  CLUS_2               2               233
  CLUS_3               2               190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZNF512B MUTATED        0      2      3
  ZNF512B WILD-TYPE    196    188    265
D60V8, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               0               196
  CLUS_2               2               188
  CLUS_3               3               265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF512B MUTATED        1      1      2      1
  ZNF512B WILD-TYPE    135    106    181     82
D60V9, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               1               135
  CLUS_2               1               106
  CLUS_3               2               181
  CLUS_4               1                82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZNF512B MUTATED        2      2      1
  ZNF512B WILD-TYPE    220    182    102
D60V10, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               2               220
  CLUS_2               2               182
  CLUS_3               1               102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZNF512B MUTATED        1      1      3
  ZNF512B WILD-TYPE    183    161    156
D60V11, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               1               183
  CLUS_2               1               161
  CLUS_3               3               156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF512B MUTATED        1      0      4      0
  ZNF512B WILD-TYPE     89    138    184     89
D60V12, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               1                89
  CLUS_2               0               138
  CLUS_3               4               184
  CLUS_4               0                89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = SPTAN1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPTAN1 MUTATED        1      0      1      0
  SPTAN1 WILD-TYPE     68     43     73     54
D61V1, multiclass
[1] "Remove cluster labels:" "SPTAN1 MUTATED"        
clus
  SPTAN1 MUTATED SPTAN1 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5954       TCGA-19-5955 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPTAN1 MUTATED        0      0      0      2
  SPTAN1 WILD-TYPE     63     50     48     77
D61V2, multiclass
[1] "Remove cluster labels:" "SPTAN1 MUTATED"        
clus
  SPTAN1 MUTATED SPTAN1 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5954       TCGA-19-5955 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"SPTAN1 WILD-TYPE" "SPTAN1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPTAN1 MUTATED        1      1      0      1
  SPTAN1 WILD-TYPE     76     92     45     59
D61V3, multiclass
        clus
vv       SPTAN1 MUTATED SPTAN1 WILD-TYPE
  CLUS_1              1               76
  CLUS_2              1               92
  CLUS_3              0               45
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPTAN1 MUTATED        1      1      1
  SPTAN1 WILD-TYPE    137     60     75
D61V4, multiclass
        clus
vv       SPTAN1 MUTATED SPTAN1 WILD-TYPE
  CLUS_1              1              137
  CLUS_2              1               60
  CLUS_3              1               75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPTAN1 MUTATED        3      5      0
  SPTAN1 WILD-TYPE    292    476      7
D61V5, multiclass
        clus
vv       SPTAN1 MUTATED SPTAN1 WILD-TYPE
  CLUS_1              3              292
  CLUS_2              5              476
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPTAN1 MUTATED        3      2      0      1
  SPTAN1 WILD-TYPE    157    230     64    165
D61V6, multiclass
        clus
vv       SPTAN1 MUTATED SPTAN1 WILD-TYPE
  CLUS_1              3              157
  CLUS_2              2              230
  CLUS_3              0               64
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPTAN1 MUTATED        2      2      2
  SPTAN1 WILD-TYPE    225    233    190
D61V7, multiclass
        clus
vv       SPTAN1 MUTATED SPTAN1 WILD-TYPE
  CLUS_1              2              225
  CLUS_2              2              233
  CLUS_3              2              190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPTAN1 MUTATED        1      3      2
  SPTAN1 WILD-TYPE    195    187    266
D61V8, multiclass
        clus
vv       SPTAN1 MUTATED SPTAN1 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              3              187
  CLUS_3              2              266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPTAN1 MUTATED        1      2      2      0
  SPTAN1 WILD-TYPE    135    105    181     83
D61V9, multiclass
        clus
vv       SPTAN1 MUTATED SPTAN1 WILD-TYPE
  CLUS_1              1              135
  CLUS_2              2              105
  CLUS_3              2              181
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPTAN1 MUTATED        2      1      2
  SPTAN1 WILD-TYPE    220    183    101
D61V10, multiclass
        clus
vv       SPTAN1 MUTATED SPTAN1 WILD-TYPE
  CLUS_1              2              220
  CLUS_2              1              183
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPTAN1 MUTATED        1      1      3
  SPTAN1 WILD-TYPE    183    161    156
D61V11, multiclass
        clus
vv       SPTAN1 MUTATED SPTAN1 WILD-TYPE
  CLUS_1              1              183
  CLUS_2              1              161
  CLUS_3              3              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPTAN1 MUTATED        1      1      2      1
  SPTAN1 WILD-TYPE     89    137    186     88
D61V12, multiclass
        clus
vv       SPTAN1 MUTATED SPTAN1 WILD-TYPE
  CLUS_1              1               89
  CLUS_2              1              137
  CLUS_3              2              186
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = THRA MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  THRA MUTATED        1      0      0      0
  THRA WILD-TYPE     68     43     74     54
D62V1, multiclass
[1] "Remove cluster labels:" "THRA MUTATED"          
clus
  THRA MUTATED THRA WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0157     TCGA-06-0158 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0166     TCGA-06-0167     TCGA-06-0168     TCGA-06-0169 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0173     TCGA-06-0174     TCGA-06-0178     TCGA-06-0184 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  THRA MUTATED        1      0      0      0
  THRA WILD-TYPE     62     50     48     79
D62V2, multiclass
[1] "Remove cluster labels:" "THRA MUTATED"          
clus
  THRA MUTATED THRA WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0157     TCGA-06-0158 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0166     TCGA-06-0167     TCGA-06-0168     TCGA-06-0169 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0173     TCGA-06-0174     TCGA-06-0178     TCGA-06-0184 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  THRA MUTATED        0      0      0      1
  THRA WILD-TYPE     77     93     45     59
D62V3, multiclass
[1] "Remove cluster labels:" "THRA MUTATED"          
clus
  THRA MUTATED THRA WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0157 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0168     TCGA-06-0169 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0173     TCGA-06-0174     TCGA-06-0178     TCGA-06-0184 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-1806 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"THRA WILD-TYPE" "THRA WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  THRA MUTATED        0      1      0
  THRA WILD-TYPE    138     60     76
D62V4, multiclass
[1] "Remove cluster labels:" "THRA MUTATED"          
clus
  THRA MUTATED THRA WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0157 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0168     TCGA-06-0169 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0173     TCGA-06-0174     TCGA-06-0178     TCGA-06-0184 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-1806 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" "THRA WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"THRA WILD-TYPE" "THRA WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  THRA MUTATED        1      4      0
  THRA WILD-TYPE    294    477      7
D62V5, multiclass
        clus
vv       THRA MUTATED THRA WILD-TYPE
  CLUS_1            1            294
  CLUS_2            4            477
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  THRA MUTATED        2      0      0      2
  THRA WILD-TYPE    158    232     64    164
D62V6, multiclass
        clus
vv       THRA MUTATED THRA WILD-TYPE
  CLUS_1            2            158
  CLUS_2            0            232
  CLUS_3            0             64
  CLUS_4            2            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  THRA MUTATED        1      1      2
  THRA WILD-TYPE    226    234    190
D62V7, multiclass
        clus
vv       THRA MUTATED THRA WILD-TYPE
  CLUS_1            1            226
  CLUS_2            1            234
  CLUS_3            2            190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  THRA MUTATED        0      1      3
  THRA WILD-TYPE    196    189    265
D62V8, multiclass
        clus
vv       THRA MUTATED THRA WILD-TYPE
  CLUS_1            0            196
  CLUS_2            1            189
  CLUS_3            3            265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  THRA MUTATED        0      1      1      2
  THRA WILD-TYPE    136    106    182     81
D62V9, multiclass
        clus
vv       THRA MUTATED THRA WILD-TYPE
  CLUS_1            0            136
  CLUS_2            1            106
  CLUS_3            1            182
  CLUS_4            2             81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  THRA MUTATED        1      2      1
  THRA WILD-TYPE    221    182    102
D62V10, multiclass
        clus
vv       THRA MUTATED THRA WILD-TYPE
  CLUS_1            1            221
  CLUS_2            2            182
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  THRA MUTATED        0      2      2
  THRA WILD-TYPE    184    160    157
D62V11, multiclass
        clus
vv       THRA MUTATED THRA WILD-TYPE
  CLUS_1            0            184
  CLUS_2            2            160
  CLUS_3            2            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  THRA MUTATED        0      1      3      0
  THRA WILD-TYPE     90    137    185     89
D62V12, multiclass
        clus
vv       THRA MUTATED THRA WILD-TYPE
  CLUS_1            0             90
  CLUS_2            1            137
  CLUS_3            3            185
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = RGS3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGS3 MUTATED        0      1      1      0
  RGS3 WILD-TYPE     69     42     73     54
D63V1, multiclass
[1] "Remove cluster labels:" "RGS3 MUTATED"          
clus
  RGS3 MUTATED RGS3 WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2623     TCGA-19-2624 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2629     TCGA-19-2631     TCGA-19-4068 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-26-5139     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-2501     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5213     TCGA-28-5214 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-4213     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4931 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGS3 MUTATED        0      0      1      1
  RGS3 WILD-TYPE     63     50     47     78
D63V2, multiclass
[1] "Remove cluster labels:" "RGS3 MUTATED"          
clus
  RGS3 MUTATED RGS3 WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2623     TCGA-19-2624 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2629     TCGA-19-2631     TCGA-19-4068 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-26-5139     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-2501     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5213     TCGA-28-5214 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-4213     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4931 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGS3 MUTATED        1      1      0      0
  RGS3 WILD-TYPE     76     92     45     60
D63V3, multiclass
[1] "Remove cluster labels:" "RGS3 MUTATED"          
clus
  RGS3 MUTATED RGS3 WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-26-5139     TCGA-26-6173     TCGA-26-6174     TCGA-27-1830 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2502     TCGA-28-2509 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-5222 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4931 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-87-5896 
"RGS3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RGS3 MUTATED        1      0      1
  RGS3 WILD-TYPE    137     61     75
D63V4, multiclass
[1] "Remove cluster labels:" "RGS3 MUTATED"          
clus
  RGS3 MUTATED RGS3 WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-26-5139     TCGA-26-6173     TCGA-26-6174     TCGA-27-1830 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2502     TCGA-28-2509 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-5222 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4931 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" "RGS3 WILD-TYPE" 
    TCGA-87-5896 
"RGS3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RGS3 MUTATED        2      6      0
  RGS3 WILD-TYPE    293    475      7
D63V5, multiclass
        clus
vv       RGS3 MUTATED RGS3 WILD-TYPE
  CLUS_1            2            293
  CLUS_2            6            475
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGS3 MUTATED        3      4      0      0
  RGS3 WILD-TYPE    157    228     64    166
D63V6, multiclass
        clus
vv       RGS3 MUTATED RGS3 WILD-TYPE
  CLUS_1            3            157
  CLUS_2            4            228
  CLUS_3            0             64
  CLUS_4            0            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RGS3 MUTATED        2      2      3
  RGS3 WILD-TYPE    225    233    189
D63V7, multiclass
        clus
vv       RGS3 MUTATED RGS3 WILD-TYPE
  CLUS_1            2            225
  CLUS_2            2            233
  CLUS_3            3            189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RGS3 MUTATED        1      3      3
  RGS3 WILD-TYPE    195    187    265
D63V8, multiclass
        clus
vv       RGS3 MUTATED RGS3 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            3            187
  CLUS_3            3            265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGS3 MUTATED        0      2      4      0
  RGS3 WILD-TYPE    136    105    179     83
D63V9, multiclass
        clus
vv       RGS3 MUTATED RGS3 WILD-TYPE
  CLUS_1            0            136
  CLUS_2            2            105
  CLUS_3            4            179
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RGS3 MUTATED        2      2      2
  RGS3 WILD-TYPE    220    182    101
D63V10, multiclass
        clus
vv       RGS3 MUTATED RGS3 WILD-TYPE
  CLUS_1            2            220
  CLUS_2            2            182
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RGS3 MUTATED        1      1      4
  RGS3 WILD-TYPE    183    161    155
D63V11, multiclass
        clus
vv       RGS3 MUTATED RGS3 WILD-TYPE
  CLUS_1            1            183
  CLUS_2            1            161
  CLUS_3            4            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGS3 MUTATED        1      1      3      1
  RGS3 WILD-TYPE     89    137    185     88
D63V12, multiclass
        clus
vv       RGS3 MUTATED RGS3 WILD-TYPE
  CLUS_1            1             89
  CLUS_2            1            137
  CLUS_3            3            185
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(64) Variable = PROKR2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROKR2 MUTATED        1      0      3      1
  PROKR2 WILD-TYPE     68     43     71     53
D64V1, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              1               68
  CLUS_2              0               43
  CLUS_3              3               71
  CLUS_4              1               53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROKR2 MUTATED        1      1      2      1
  PROKR2 WILD-TYPE     62     49     46     78
D64V2, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              1               62
  CLUS_2              1               49
  CLUS_3              2               46
  CLUS_4              1               78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROKR2 MUTATED        1      1      1      2
  PROKR2 WILD-TYPE     76     92     44     58
D64V3, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              1               76
  CLUS_2              1               92
  CLUS_3              1               44
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PROKR2 MUTATED        1      1      3
  PROKR2 WILD-TYPE    137     60     73
D64V4, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              1              137
  CLUS_2              1               60
  CLUS_3              3               73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PROKR2 MUTATED        7      2      0
  PROKR2 WILD-TYPE    288    479      7
D64V5, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              7              288
  CLUS_2              2              479
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROKR2 MUTATED        3      2      0      0
  PROKR2 WILD-TYPE    157    230     64    166
D64V6, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              3              157
  CLUS_2              2              230
  CLUS_3              0               64
  CLUS_4              0              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PROKR2 MUTATED        6      1      1
  PROKR2 WILD-TYPE    221    234    191
D64V7, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              6              221
  CLUS_2              1              234
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PROKR2 MUTATED        6      1      1
  PROKR2 WILD-TYPE    190    189    267
D64V8, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              6              190
  CLUS_2              1              189
  CLUS_3              1              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROKR2 MUTATED        0      0      3      0
  PROKR2 WILD-TYPE    136    107    180     83
D64V9, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              0              136
  CLUS_2              0              107
  CLUS_3              3              180
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PROKR2 MUTATED        1      1      1
  PROKR2 WILD-TYPE    221    183    102
D64V10, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              1              221
  CLUS_2              1              183
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PROKR2 MUTATED        1      1      1
  PROKR2 WILD-TYPE    183    161    158
D64V11, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              1              183
  CLUS_2              1              161
  CLUS_3              1              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROKR2 MUTATED        0      1      1      1
  PROKR2 WILD-TYPE     90    137    187     88
D64V12, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              0               90
  CLUS_2              1              137
  CLUS_3              1              187
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(65) Variable = SLC6A14 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A14 MUTATED        1      1      1      0
  SLC6A14 WILD-TYPE     68     42     73     54
D65V1, multiclass
        clus
vv       SLC6A14 MUTATED SLC6A14 WILD-TYPE
  CLUS_1               1                68
  CLUS_2               1                42
  CLUS_3               1                73
  CLUS_4               0                54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A14 MUTATED        1      1      1      0
  SLC6A14 WILD-TYPE     62     49     47     79
D65V2, multiclass
        clus
vv       SLC6A14 MUTATED SLC6A14 WILD-TYPE
  CLUS_1               1                62
  CLUS_2               1                49
  CLUS_3               1                47
  CLUS_4               0                79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A14 MUTATED        2      1      0      1
  SLC6A14 WILD-TYPE     75     92     45     59
D65V3, multiclass
        clus
vv       SLC6A14 MUTATED SLC6A14 WILD-TYPE
  CLUS_1               2                75
  CLUS_2               1                92
  CLUS_3               0                45
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC6A14 MUTATED        2      1      1
  SLC6A14 WILD-TYPE    136     60     75
D65V4, multiclass
        clus
vv       SLC6A14 MUTATED SLC6A14 WILD-TYPE
  CLUS_1               2               136
  CLUS_2               1                60
  CLUS_3               1                75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC6A14 MUTATED        3      3      0
  SLC6A14 WILD-TYPE    292    478      7
D65V5, multiclass
        clus
vv       SLC6A14 MUTATED SLC6A14 WILD-TYPE
  CLUS_1               3               292
  CLUS_2               3               478
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A14 MUTATED        3      0      0      0
  SLC6A14 WILD-TYPE    157    232     64    166
D65V6, multiclass
        clus
vv       SLC6A14 MUTATED SLC6A14 WILD-TYPE
  CLUS_1               3               157
  CLUS_2               0               232
  CLUS_3               0                64
  CLUS_4               0               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC6A14 MUTATED        3      0      1
  SLC6A14 WILD-TYPE    224    235    191
D65V7, multiclass
        clus
vv       SLC6A14 MUTATED SLC6A14 WILD-TYPE
  CLUS_1               3               224
  CLUS_2               0               235
  CLUS_3               1               191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC6A14 MUTATED        2      1      1
  SLC6A14 WILD-TYPE    194    189    267
D65V8, multiclass
        clus
vv       SLC6A14 MUTATED SLC6A14 WILD-TYPE
  CLUS_1               2               194
  CLUS_2               1               189
  CLUS_3               1               267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A14 MUTATED        0      1      1      0
  SLC6A14 WILD-TYPE    136    106    182     83
D65V9, multiclass
[1] "Remove cluster labels:" "SLC6A14 MUTATED"       
clus
  SLC6A14 MUTATED SLC6A14 WILD-TYPE 
                2               507 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64R 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A64S        TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A64X        TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75O 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A75P        TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DH-5143        TCGA-DH-5144        TCGA-DH-A669        TCGA-DH-A66B 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DH-A66D        TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7UR 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DH-A7US        TCGA-DH-A7UT        TCGA-DH-A7UU        TCGA-DH-A7UV 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-5847        TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-5853        TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-5871        TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6393 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6394        TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6399        TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6403        TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6407        TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7006        TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7010        TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7018        TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7294        TCGA-DU-7298        TCGA-DU-7299        TCGA-DU-7300 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7301        TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7309        TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-8163        TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-8167        TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A5TS        TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A5TY        TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A6S7        TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A76O        TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A7TA        TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A7TG        TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-5304        TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-5318        TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YE        TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YK        TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YO        TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7Z3        TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-F6-A8O3        TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-5964        TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-6690        TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-7636        TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-7643        TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-8186        TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-8191        TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A4MX        TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A60L        TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A713        TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7467        TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7471        TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7475        TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7479        TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7483        TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7603        TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7607        TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7611        TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7677        TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7686        TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7690        TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7694        TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7856        TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7873        TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7879        TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7884        TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8012        TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8019        TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8107        TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8111        TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8563        TCGA-HT-A4DS        TCGA-HT-A4DV        TCGA-HT-A5R5 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RA        TCGA-HT-A5RB 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A5RC        TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A617        TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A61B        TCGA-HT-A61C        TCGA-HT-A74H        TCGA-HT-A74K 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486        TCGA-HW-7487 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491        TCGA-HW-7495 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HW-8319        TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HW-A5KJ        TCGA-HW-A5KK        TCGA-HW-A5KL        TCGA-HW-A5KM 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-IK-7675        TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CX        TCGA-QH-A6CY 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4        TCGA-QH-A6X5 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M        TCGA-RY-A83X 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840        TCGA-RY-A843 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS        TCGA-S9-A6TU 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX        TCGA-S9-A6TY 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1        TCGA-S9-A6U2 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8        TCGA-S9-A6U9 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC6A14 MUTATED        0      0      2
  SLC6A14 WILD-TYPE    222    184    101
D65V10, multiclass
[1] "Remove cluster labels:" "SLC6A14 MUTATED"       
clus
  SLC6A14 MUTATED SLC6A14 WILD-TYPE 
                2               507 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64R 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A64S        TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A64X        TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75O 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A75P        TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DH-5143        TCGA-DH-5144        TCGA-DH-A669        TCGA-DH-A66B 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DH-A66D        TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7UR 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DH-A7US        TCGA-DH-A7UT        TCGA-DH-A7UU        TCGA-DH-A7UV 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-5847        TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-5853        TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-5871        TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6393 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6394        TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6399        TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6403        TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6407        TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7006        TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7010        TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7018        TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7294        TCGA-DU-7298        TCGA-DU-7299        TCGA-DU-7300 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7301        TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7309        TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-8163        TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-8167        TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A5TS        TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A5TY        TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A6S7        TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A76O        TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A7TA        TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A7TG        TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-5304        TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-5318        TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YE        TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YK        TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YO        TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7Z3        TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-F6-A8O3        TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-5964        TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-6690        TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-7636        TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-7643        TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-8186        TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-8191        TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A4MX        TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A60L        TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A713        TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7467        TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7471        TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7475        TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7479        TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7483        TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7603        TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7607        TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7611        TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7677        TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7686        TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7690        TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7694        TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7856        TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7873        TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7879        TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7884        TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8012        TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8019        TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8107        TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8111        TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8563        TCGA-HT-A4DS        TCGA-HT-A4DV        TCGA-HT-A5R5 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RA        TCGA-HT-A5RB 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A5RC        TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A617        TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A61B        TCGA-HT-A61C        TCGA-HT-A74H        TCGA-HT-A74K 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486        TCGA-HW-7487 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491        TCGA-HW-7495 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HW-8319        TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HW-A5KJ        TCGA-HW-A5KK        TCGA-HW-A5KL        TCGA-HW-A5KM 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-IK-7675        TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CX        TCGA-QH-A6CY 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4        TCGA-QH-A6X5 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M        TCGA-RY-A83X 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840        TCGA-RY-A843 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS        TCGA-S9-A6TU 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX        TCGA-S9-A6TY 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1        TCGA-S9-A6U2 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8        TCGA-S9-A6U9 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC6A14 MUTATED        0      0      2
  SLC6A14 WILD-TYPE    184    162    157
D65V11, multiclass
[1] "Remove cluster labels:" "SLC6A14 MUTATED"       
clus
  SLC6A14 MUTATED SLC6A14 WILD-TYPE 
                2               503 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA        TCGA-DB-A4XB 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE        TCGA-DB-A4XF 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L        TCGA-DB-A64O 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64R        TCGA-DB-A64S 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75O        TCGA-DB-A75P 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DH-5144        TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DH-A7UT        TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6393        TCGA-DU-6394 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397        TCGA-DU-6399 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402        TCGA-DU-6403 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406        TCGA-DU-6407 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542        TCGA-DU-7006 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009        TCGA-DU-7010 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015        TCGA-DU-7018 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7298        TCGA-DU-7299        TCGA-DU-7300        TCGA-DU-7301 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD        TCGA-E1-A7YE 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ        TCGA-E1-A7YK 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YO 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU        TCGA-E1-A7YV 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2        TCGA-E1-A7Z3 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264        TCGA-F6-A8O3 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963        TCGA-FG-5964 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689        TCGA-FG-6690 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634        TCGA-FG-7636 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K        TCGA-FG-A60L 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3        TCGA-FG-A70Y 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711        TCGA-FG-A713 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833        TCGA-HT-7467 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8563 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A4DS        TCGA-HT-A4DV        TCGA-HT-A5R5        TCGA-HT-A5R7 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A5R9        TCGA-HT-A5RA        TCGA-HT-A5RB        TCGA-HT-A5RC 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616        TCGA-HT-A617 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A        TCGA-HT-A61B 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A61C        TCGA-HT-A74H        TCGA-HT-A74K        TCGA-HT-A74L 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A74O        TCGA-HW-7486        TCGA-HW-7487        TCGA-HW-7489 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HW-7490        TCGA-HW-7491        TCGA-HW-7495        TCGA-HW-8319 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HW-A5KK        TCGA-HW-A5KL        TCGA-HW-A5KM        TCGA-IK-7675 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1        TCGA-P5-A5ET 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW        TCGA-P5-A5EX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0        TCGA-P5-A5F1 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A72U        TCGA-P5-A72W 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A72X        TCGA-P5-A72Z        TCGA-P5-A730        TCGA-P5-A731 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A733        TCGA-P5-A735        TCGA-P5-A737        TCGA-P5-A77W 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A77X        TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A65S        TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A6CS        TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A6CY        TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A6X5        TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A6XC        TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-R8-A6ML        TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-RY-A83X        TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-RY-A843        TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6TU        TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6TY        TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6U2        TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A14 MUTATED        0      0      1      1
  SLC6A14 WILD-TYPE     90    138    187     88
D65V12, multiclass
[1] "Remove cluster labels:" "SLC6A14 MUTATED"       
clus
  SLC6A14 MUTATED SLC6A14 WILD-TYPE 
                2               503 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA        TCGA-DB-A4XB 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE        TCGA-DB-A4XF 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L        TCGA-DB-A64O 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64R        TCGA-DB-A64S 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75O        TCGA-DB-A75P 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DH-5144        TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DH-A7UT        TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6393        TCGA-DU-6394 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397        TCGA-DU-6399 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402        TCGA-DU-6403 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406        TCGA-DU-6407 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542        TCGA-DU-7006 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009        TCGA-DU-7010 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015        TCGA-DU-7018 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7298        TCGA-DU-7299        TCGA-DU-7300        TCGA-DU-7301 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD        TCGA-E1-A7YE 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ        TCGA-E1-A7YK 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YO 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU        TCGA-E1-A7YV 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2        TCGA-E1-A7Z3 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264        TCGA-F6-A8O3 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963        TCGA-FG-5964 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689        TCGA-FG-6690 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634        TCGA-FG-7636 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K        TCGA-FG-A60L 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3        TCGA-FG-A70Y 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711        TCGA-FG-A713 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833        TCGA-HT-7467 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8563 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A4DS        TCGA-HT-A4DV        TCGA-HT-A5R5        TCGA-HT-A5R7 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A5R9        TCGA-HT-A5RA        TCGA-HT-A5RB        TCGA-HT-A5RC 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616        TCGA-HT-A617 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A        TCGA-HT-A61B 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A61C        TCGA-HT-A74H        TCGA-HT-A74K        TCGA-HT-A74L 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HT-A74O        TCGA-HW-7486        TCGA-HW-7487        TCGA-HW-7489 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HW-7490        TCGA-HW-7491        TCGA-HW-7495        TCGA-HW-8319 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-HW-A5KK        TCGA-HW-A5KL        TCGA-HW-A5KM        TCGA-IK-7675 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1        TCGA-P5-A5ET 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW        TCGA-P5-A5EX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0        TCGA-P5-A5F1 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A72U        TCGA-P5-A72W 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A72X        TCGA-P5-A72Z        TCGA-P5-A730        TCGA-P5-A731 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A733        TCGA-P5-A735        TCGA-P5-A737        TCGA-P5-A77W 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-P5-A77X        TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A65S        TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A6CS        TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A6CY        TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A6X5        TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-QH-A6XC        TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-R8-A6ML        TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-RY-A83X        TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-RY-A843        TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6TU        TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6TY        TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6U2        TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 
       TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" "SLC6A14 WILD-TYPE" 

Clustering(66) Variable = MST1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MST1 MUTATED        1      0      1      0
  MST1 WILD-TYPE     68     43     73     54
D66V1, multiclass
[1] "Remove cluster labels:" "MST1 MUTATED"          
clus
  MST1 MUTATED MST1 WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0166     TCGA-06-0167     TCGA-06-0168     TCGA-06-0169 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0173     TCGA-06-0174     TCGA-06-0178     TCGA-06-0184 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MST1 MUTATED        1      0      0      1
  MST1 WILD-TYPE     62     50     48     78
D66V2, multiclass
[1] "Remove cluster labels:" "MST1 MUTATED"          
clus
  MST1 MUTATED MST1 WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0166     TCGA-06-0167     TCGA-06-0168     TCGA-06-0169 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0173     TCGA-06-0174     TCGA-06-0178     TCGA-06-0184 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MST1 MUTATED        0      1      0      1
  MST1 WILD-TYPE     77     92     45     59
D66V3, multiclass
[1] "Remove cluster labels:" "MST1 MUTATED"          
clus
  MST1 MUTATED MST1 WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0166     TCGA-06-0168     TCGA-06-0169 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0173     TCGA-06-0174     TCGA-06-0178     TCGA-06-0184 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-1806 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2494     TCGA-32-2495 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-4213     TCGA-32-4719     TCGA-32-5222     TCGA-41-2571 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-41-2572     TCGA-41-2573     TCGA-41-2575     TCGA-41-3392 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-41-3393     TCGA-41-3915     TCGA-41-4097     TCGA-41-5651 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6575     TCGA-74-6577 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-87-5896 
"MST1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MST1 MUTATED        2      0      0
  MST1 WILD-TYPE    136     61     76
D66V4, multiclass
[1] "Remove cluster labels:" "MST1 MUTATED"          
clus
  MST1 MUTATED MST1 WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0166     TCGA-06-0168     TCGA-06-0169 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0173     TCGA-06-0174     TCGA-06-0178     TCGA-06-0184 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-1806 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2494     TCGA-32-2495 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-32-4213     TCGA-32-4719     TCGA-32-5222     TCGA-41-2571 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-41-2572     TCGA-41-2573     TCGA-41-2575     TCGA-41-3392 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-41-3393     TCGA-41-3915     TCGA-41-4097     TCGA-41-5651 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6575     TCGA-74-6577 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" "MST1 WILD-TYPE" 
    TCGA-87-5896 
"MST1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MST1 MUTATED        3      3      0
  MST1 WILD-TYPE    292    478      7
D66V5, multiclass
        clus
vv       MST1 MUTATED MST1 WILD-TYPE
  CLUS_1            3            292
  CLUS_2            3            478
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MST1 MUTATED        2      1      0      1
  MST1 WILD-TYPE    158    231     64    165
D66V6, multiclass
        clus
vv       MST1 MUTATED MST1 WILD-TYPE
  CLUS_1            2            158
  CLUS_2            1            231
  CLUS_3            0             64
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MST1 MUTATED        3      1      1
  MST1 WILD-TYPE    224    234    191
D66V7, multiclass
        clus
vv       MST1 MUTATED MST1 WILD-TYPE
  CLUS_1            3            224
  CLUS_2            1            234
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MST1 MUTATED        2      2      1
  MST1 WILD-TYPE    194    188    267
D66V8, multiclass
        clus
vv       MST1 MUTATED MST1 WILD-TYPE
  CLUS_1            2            194
  CLUS_2            2            188
  CLUS_3            1            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MST1 MUTATED        1      2      1      0
  MST1 WILD-TYPE    135    105    182     83
D66V9, multiclass
        clus
vv       MST1 MUTATED MST1 WILD-TYPE
  CLUS_1            1            135
  CLUS_2            2            105
  CLUS_3            1            182
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MST1 MUTATED        1      1      2
  MST1 WILD-TYPE    221    183    101
D66V10, multiclass
        clus
vv       MST1 MUTATED MST1 WILD-TYPE
  CLUS_1            1            221
  CLUS_2            1            183
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MST1 MUTATED        1      2      1
  MST1 WILD-TYPE    183    160    158
D66V11, multiclass
        clus
vv       MST1 MUTATED MST1 WILD-TYPE
  CLUS_1            1            183
  CLUS_2            2            160
  CLUS_3            1            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MST1 MUTATED        1      0      2      1
  MST1 WILD-TYPE     89    138    186     88
D66V12, multiclass
        clus
vv       MST1 MUTATED MST1 WILD-TYPE
  CLUS_1            1             89
  CLUS_2            0            138
  CLUS_3            2            186
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(67) Variable = NUP210L MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP210L MUTATED        1      2      2      1
  NUP210L WILD-TYPE     68     41     72     53
D67V1, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               1                68
  CLUS_2               2                41
  CLUS_3               2                72
  CLUS_4               1                53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP210L MUTATED        0      2      1      3
  NUP210L WILD-TYPE     63     48     47     76
D67V2, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               0                63
  CLUS_2               2                48
  CLUS_3               1                47
  CLUS_4               3                76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP210L MUTATED        3      3      2      0
  NUP210L WILD-TYPE     74     90     43     60
D67V3, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               3                74
  CLUS_2               3                90
  CLUS_3               2                43
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NUP210L MUTATED        5      0      3
  NUP210L WILD-TYPE    133     61     73
D67V4, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               5               133
  CLUS_2               0                61
  CLUS_3               3                73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NUP210L MUTATED        7      4      0
  NUP210L WILD-TYPE    288    477      7
D67V5, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               7               288
  CLUS_2               4               477
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP210L MUTATED        7      1      0      1
  NUP210L WILD-TYPE    153    231     64    165
D67V6, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               7               153
  CLUS_2               1               231
  CLUS_3               0                64
  CLUS_4               1               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NUP210L MUTATED        6      0      2
  NUP210L WILD-TYPE    221    235    190
D67V7, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               6               221
  CLUS_2               0               235
  CLUS_3               2               190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NUP210L MUTATED        5      1      2
  NUP210L WILD-TYPE    191    189    266
D67V8, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               5               191
  CLUS_2               1               189
  CLUS_3               2               266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP210L MUTATED        0      2      2      0
  NUP210L WILD-TYPE    136    105    181     83
D67V9, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               0               136
  CLUS_2               2               105
  CLUS_3               2               181
  CLUS_4               0                83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NUP210L MUTATED        0      2      2
  NUP210L WILD-TYPE    222    182    101
D67V10, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               0               222
  CLUS_2               2               182
  CLUS_3               2               101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NUP210L MUTATED        1      0      3
  NUP210L WILD-TYPE    183    162    156
D67V11, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               1               183
  CLUS_2               0               162
  CLUS_3               3               156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP210L MUTATED        0      0      3      1
  NUP210L WILD-TYPE     90    138    185     88
D67V12, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               0                90
  CLUS_2               0               138
  CLUS_3               3               185
  CLUS_4               1                88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(68) Variable = MED9 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED9 MUTATED        0      0      0      0
  MED9 WILD-TYPE     69     43     74     54
D68V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED9 MUTATED        0      0      0      0
  MED9 WILD-TYPE     63     50     48     79
D68V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED9 MUTATED        0      0      0      0
  MED9 WILD-TYPE     77     93     45     60
D68V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MED9 MUTATED        0      0      0
  MED9 WILD-TYPE    138     61     76
D68V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MED9 MUTATED        1      2      0
  MED9 WILD-TYPE    294    479      7
D68V5, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            1            294
  CLUS_2            2            479
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED9 MUTATED        0      1      1      1
  MED9 WILD-TYPE    160    231     63    165
D68V6, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            0            160
  CLUS_2            1            231
  CLUS_3            1             63
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MED9 MUTATED        0      1      2
  MED9 WILD-TYPE    227    234    190
D68V7, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            0            227
  CLUS_2            1            234
  CLUS_3            2            190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MED9 MUTATED        1      1      1
  MED9 WILD-TYPE    195    189    267
D68V8, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            1            189
  CLUS_3            1            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED9 MUTATED        1      0      2      0
  MED9 WILD-TYPE    135    107    181     83
D68V9, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            1            135
  CLUS_2            0            107
  CLUS_3            2            181
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MED9 MUTATED        1      1      1
  MED9 WILD-TYPE    221    183    102
D68V10, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            1            221
  CLUS_2            1            183
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MED9 MUTATED        2      0      1
  MED9 WILD-TYPE    182    162    158
D68V11, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            2            182
  CLUS_2            0            162
  CLUS_3            1            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED9 MUTATED        0      0      2      1
  MED9 WILD-TYPE     90    138    186     88
D68V12, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            0            138
  CLUS_3            2            186
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(69) Variable = ZDHHC4 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC4 MUTATED        0      1      0      0
  ZDHHC4 WILD-TYPE     69     42     74     54
D69V1, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-76-4925 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC4 MUTATED        0      1      0      0
  ZDHHC4 WILD-TYPE     63     49     48     79
D69V2, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-76-4925 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC4 MUTATED        0      3      0      0
  ZDHHC4 WILD-TYPE     77     90     45     60
D69V3, multiclass
        clus
vv       ZDHHC4 MUTATED ZDHHC4 WILD-TYPE
  CLUS_1              0               77
  CLUS_2              3               90
  CLUS_3              0               45
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC4 MUTATED        2      0      1
  ZDHHC4 WILD-TYPE    136     61     75
D69V4, multiclass
        clus
vv       ZDHHC4 MUTATED ZDHHC4 WILD-TYPE
  CLUS_1              2              136
  CLUS_2              0               61
  CLUS_3              1               75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC4 MUTATED        3      1      0
  ZDHHC4 WILD-TYPE    292    480      7
D69V5, multiclass
        clus
vv       ZDHHC4 MUTATED ZDHHC4 WILD-TYPE
  CLUS_1              3              292
  CLUS_2              1              480
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC4 MUTATED        4      0      0      0
  ZDHHC4 WILD-TYPE    156    232     64    166
D69V6, multiclass
        clus
vv       ZDHHC4 MUTATED ZDHHC4 WILD-TYPE
  CLUS_1              4              156
  CLUS_2              0              232
  CLUS_3              0               64
  CLUS_4              0              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC4 MUTATED        2      0      0
  ZDHHC4 WILD-TYPE    225    235    192
D69V7, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               2              652 
      TCGA-02-0047       TCGA-02-0055       TCGA-02-2483       TCGA-02-2485 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-02-2486       TCGA-06-0129       TCGA-06-0130       TCGA-06-0132 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0157       TCGA-06-0158       TCGA-06-0168 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0174       TCGA-06-0178       TCGA-06-0184       TCGA-06-0219 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0238       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0649       TCGA-06-0686       TCGA-06-0743       TCGA-06-0744 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0745       TCGA-06-0747       TCGA-06-0749       TCGA-06-0750 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0878       TCGA-06-0882       TCGA-06-1804       TCGA-06-2557 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-08-0386       TCGA-12-0616 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0821       TCGA-12-1597 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-5299       TCGA-14-0781       TCGA-14-0787       TCGA-14-0789 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0817       TCGA-14-1823       TCGA-14-1825 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-15-0742       TCGA-15-1444 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-1045       TCGA-19-1390       TCGA-19-2619 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1834 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1837       TCGA-27-2519       TCGA-27-2521 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2528 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2499       TCGA-28-2509 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5213 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5220 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1980       TCGA-32-1982       TCGA-32-2615 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4213 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-3915 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-41-4097       TCGA-76-4925       TCGA-76-4926       TCGA-76-4927 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-4928       TCGA-76-4929       TCGA-76-4931       TCGA-76-4932 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7011       TCGA-DU-7012 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74J       TCGA-HT-A74K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CW       TCGA-QH-A6CX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC4 MUTATED        1      1      0
  ZDHHC4 WILD-TYPE    195    189    268
D69V8, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               2              652 
      TCGA-02-0047       TCGA-02-0055       TCGA-02-2483       TCGA-02-2485 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-02-2486       TCGA-06-0129       TCGA-06-0130       TCGA-06-0132 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0157       TCGA-06-0158       TCGA-06-0168 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0174       TCGA-06-0178       TCGA-06-0184       TCGA-06-0219 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0238       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0649       TCGA-06-0686       TCGA-06-0743       TCGA-06-0744 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0745       TCGA-06-0747       TCGA-06-0749       TCGA-06-0750 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0878       TCGA-06-0882       TCGA-06-1804       TCGA-06-2557 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-08-0386       TCGA-12-0616 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0821       TCGA-12-1597 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-5299       TCGA-14-0781       TCGA-14-0787       TCGA-14-0789 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0817       TCGA-14-1823       TCGA-14-1825 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-15-0742       TCGA-15-1444 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-1045       TCGA-19-1390       TCGA-19-2619 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1834 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1837       TCGA-27-2519       TCGA-27-2521 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2528 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2499       TCGA-28-2509 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5213 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5220 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1980       TCGA-32-1982       TCGA-32-2615 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4213 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-3915 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-41-4097       TCGA-76-4925       TCGA-76-4926       TCGA-76-4927 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-4928       TCGA-76-4929       TCGA-76-4931       TCGA-76-4932 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7011       TCGA-DU-7012 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74J       TCGA-HT-A74K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CW       TCGA-QH-A6CX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC4 MUTATED        0      1      0      0
  ZDHHC4 WILD-TYPE    136    106    183     83
D69V9, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               1              508 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC4 MUTATED        0      0      1
  ZDHHC4 WILD-TYPE    222    184    102
D69V10, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               1              508 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC4 MUTATED        0      0      1
  ZDHHC4 WILD-TYPE    184    162    158
D69V11, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               1              504 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393       TCGA-DU-6394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC4 MUTATED        0      0      1      0
  ZDHHC4 WILD-TYPE     90    138    187     89
D69V12, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               1              504 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393       TCGA-DU-6394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 

Clustering(70) Variable = MATK MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MATK MUTATED        1      0      1      0
  MATK WILD-TYPE     68     43     73     54
D70V1, multiclass
[1] "Remove cluster labels:" "MATK MUTATED"          
clus
  MATK MUTATED MATK WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2483 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-02-2485     TCGA-02-2486     TCGA-06-0122     TCGA-06-0124 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0126     TCGA-06-0128     TCGA-06-0129     TCGA-06-0130 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0132     TCGA-06-0137     TCGA-06-0139     TCGA-06-0140 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0142     TCGA-06-0145     TCGA-06-0152 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0154     TCGA-06-0155     TCGA-06-0157     TCGA-06-0158 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0166     TCGA-06-0167     TCGA-06-0168     TCGA-06-0169 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0173     TCGA-06-0174     TCGA-06-0178     TCGA-06-0184 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0871     TCGA-14-1456 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5954     TCGA-19-5955 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-19-5958     TCGA-19-5959     TCGA-19-5960     TCGA-26-1439 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2501     TCGA-28-2502 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-28-2509     TCGA-28-2510     TCGA-28-2513     TCGA-28-2514 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-28-5204     TCGA-28-5207     TCGA-28-5208     TCGA-28-5209 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"MATK WILD-TYPE" "MATK WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MATK MUTATED        0      0      1      1
  MATK WILD-TYPE     63     50     47     78
D70V2, multiclass
[1] "Remove cluster labels:" "MATK MUTATED"          
clus
  MATK MUTATED MATK WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2483 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-02-2485     TCGA-02-2486     TCGA-06-0122     TCGA-06-0124 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0126     TCGA-06-0128     TCGA-06-0129     TCGA-06-0130 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0132     TCGA-06-0137     TCGA-06-0139     TCGA-06-0140 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0142     TCGA-06-0145     TCGA-06-0152 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0154     TCGA-06-0155     TCGA-06-0157     TCGA-06-0158 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0166     TCGA-06-0167     TCGA-06-0168     TCGA-06-0169 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0173     TCGA-06-0174     TCGA-06-0178     TCGA-06-0184 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0871     TCGA-14-1456 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5954     TCGA-19-5955 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-19-5958     TCGA-19-5959     TCGA-19-5960     TCGA-26-1439 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2501     TCGA-28-2502 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-28-2509     TCGA-28-2510     TCGA-28-2513     TCGA-28-2514 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-28-5204     TCGA-28-5207     TCGA-28-5208     TCGA-28-5209 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" "MATK WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"MATK WILD-TYPE" "MATK WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MATK MUTATED        0      1      2      0
  MATK WILD-TYPE     77     92     43     60
D70V3, multiclass
        clus
vv       MATK MUTATED MATK WILD-TYPE
  CLUS_1            0             77
  CLUS_2            1             92
  CLUS_3            2             43
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MATK MUTATED        2      0      1
  MATK WILD-TYPE    136     61     75
D70V4, multiclass
        clus
vv       MATK MUTATED MATK WILD-TYPE
  CLUS_1            2            136
  CLUS_2            0             61
  CLUS_3            1             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MATK MUTATED        2      7      0
  MATK WILD-TYPE    293    474      7
D70V5, multiclass
        clus
vv       MATK MUTATED MATK WILD-TYPE
  CLUS_1            2            293
  CLUS_2            7            474
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MATK MUTATED        2      2      0      3
  MATK WILD-TYPE    158    230     64    163
D70V6, multiclass
        clus
vv       MATK MUTATED MATK WILD-TYPE
  CLUS_1            2            158
  CLUS_2            2            230
  CLUS_3            0             64
  CLUS_4            3            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MATK MUTATED        2      2      3
  MATK WILD-TYPE    225    233    189
D70V7, multiclass
        clus
vv       MATK MUTATED MATK WILD-TYPE
  CLUS_1            2            225
  CLUS_2            2            233
  CLUS_3            3            189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MATK MUTATED        1      1      5
  MATK WILD-TYPE    195    189    263
D70V8, multiclass
        clus
vv       MATK MUTATED MATK WILD-TYPE
  CLUS_1            1            195
  CLUS_2            1            189
  CLUS_3            5            263
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MATK MUTATED        0      2      3      1
  MATK WILD-TYPE    136    105    180     82
D70V9, multiclass
        clus
vv       MATK MUTATED MATK WILD-TYPE
  CLUS_1            0            136
  CLUS_2            2            105
  CLUS_3            3            180
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MATK MUTATED        2      3      1
  MATK WILD-TYPE    220    181    102
D70V10, multiclass
        clus
vv       MATK MUTATED MATK WILD-TYPE
  CLUS_1            2            220
  CLUS_2            3            181
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MATK MUTATED        1      2      3
  MATK WILD-TYPE    183    160    156
D70V11, multiclass
        clus
vv       MATK MUTATED MATK WILD-TYPE
  CLUS_1            1            183
  CLUS_2            2            160
  CLUS_3            3            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MATK MUTATED        0      2      4      0
  MATK WILD-TYPE     90    136    184     89
D70V12, multiclass
        clus
vv       MATK MUTATED MATK WILD-TYPE
  CLUS_1            0             90
  CLUS_2            2            136
  CLUS_3            4            184
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(71) Variable = KDR MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDR MUTATED        1      2      1      4
  KDR WILD-TYPE     68     41     73     50
D71V1, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           1            68
  CLUS_2           2            41
  CLUS_3           1            73
  CLUS_4           4            50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDR MUTATED        1      3      1      3
  KDR WILD-TYPE     62     47     47     76
D71V2, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           1            62
  CLUS_2           3            47
  CLUS_3           1            47
  CLUS_4           3            76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDR MUTATED        2      1      3      2
  KDR WILD-TYPE     75     92     42     58
D71V3, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           2            75
  CLUS_2           1            92
  CLUS_3           3            42
  CLUS_4           2            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KDR MUTATED        6      1      1
  KDR WILD-TYPE    132     60     75
D71V4, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           6           132
  CLUS_2           1            60
  CLUS_3           1            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KDR MUTATED        8      5      0
  KDR WILD-TYPE    287    476      7
D71V5, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           8           287
  CLUS_2           5           476
  CLUS_3           0             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDR MUTATED        6      1      0      1
  KDR WILD-TYPE    154    231     64    165
D71V6, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           6           154
  CLUS_2           1           231
  CLUS_3           0            64
  CLUS_4           1           165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KDR MUTATED        4      0      2
  KDR WILD-TYPE    223    235    190
D71V7, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           4           223
  CLUS_2           0           235
  CLUS_3           2           190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KDR MUTATED        3      1      2
  KDR WILD-TYPE    193    189    266
D71V8, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           3           193
  CLUS_2           1           189
  CLUS_3           2           266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDR MUTATED        0      2      3      0
  KDR WILD-TYPE    136    105    180     83
D71V9, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           0           136
  CLUS_2           2           105
  CLUS_3           3           180
  CLUS_4           0            83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KDR MUTATED        0      2      3
  KDR WILD-TYPE    222    182    100
D71V10, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           0           222
  CLUS_2           2           182
  CLUS_3           3           100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KDR MUTATED        2      0      3
  KDR WILD-TYPE    182    162    156
D71V11, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           2           182
  CLUS_2           0           162
  CLUS_3           3           156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDR MUTATED        0      0      3      2
  KDR WILD-TYPE     90    138    185     87
D71V12, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           0            90
  CLUS_2           0           138
  CLUS_3           3           185
  CLUS_4           2            87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(72) Variable = WRN MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WRN MUTATED        0      0      0      1
  WRN WILD-TYPE     69     43     74     53
D72V1, multiclass
[1] "Remove cluster labels:" "WRN MUTATED"           
clus
  WRN MUTATED WRN WILD-TYPE 
            1           239 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2559 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564    TCGA-06-2565 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408    TCGA-06-5410 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414    TCGA-06-5415 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858    TCGA-06-5859 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386    TCGA-12-0616 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692    TCGA-12-0821 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652    TCGA-12-3653 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781    TCGA-14-0786 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813    TCGA-14-0817 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825    TCGA-14-1829 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742    TCGA-15-1444 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048    TCGA-19-1390 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954    TCGA-19-5955 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439    TCGA-26-1442 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135    TCGA-26-5136 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2518    TCGA-27-2519    TCGA-27-2521    TCGA-27-2523    TCGA-27-2524 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-4211    TCGA-32-4213    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-2572    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4934    TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WRN MUTATED        0      1      0      0
  WRN WILD-TYPE     63     49     48     79
D72V2, multiclass
[1] "Remove cluster labels:" "WRN MUTATED"           
clus
  WRN MUTATED WRN WILD-TYPE 
            1           239 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2559 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564    TCGA-06-2565 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408    TCGA-06-5410 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414    TCGA-06-5415 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858    TCGA-06-5859 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386    TCGA-12-0616 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692    TCGA-12-0821 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652    TCGA-12-3653 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781    TCGA-14-0786 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813    TCGA-14-0817 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825    TCGA-14-1829 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742    TCGA-15-1444 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048    TCGA-19-1390 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954    TCGA-19-5955 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439    TCGA-26-1442 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135    TCGA-26-5136 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2518    TCGA-27-2519    TCGA-27-2521    TCGA-27-2523    TCGA-27-2524 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-4211    TCGA-32-4213    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-2572    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4934    TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WRN MUTATED        0      0      1      0
  WRN WILD-TYPE     77     93     44     60
D72V3, multiclass
[1] "Remove cluster labels:" "WRN MUTATED"           
clus
  WRN MUTATED WRN WILD-TYPE 
            1           274 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697    TCGA-06-6698 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-08-0386    TCGA-12-0616 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692    TCGA-12-0821 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652    TCGA-12-3653 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0740    TCGA-14-0781 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0817    TCGA-14-0862    TCGA-14-0871    TCGA-14-1043    TCGA-14-1395 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-1450    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825    TCGA-14-1829 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742    TCGA-15-1444 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048    TCGA-19-1390 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953    TCGA-19-5954 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174    TCGA-27-1830 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834    TCGA-27-1835 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518    TCGA-27-2519 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2521    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526    TCGA-27-2527 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2502    TCGA-28-2509 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-2510    TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213    TCGA-28-5214 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219    TCGA-28-5220 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-6450    TCGA-32-1970    TCGA-32-1977    TCGA-32-1979    TCGA-32-1980 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-2491    TCGA-32-2494 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-2495    TCGA-32-2615    TCGA-32-2632    TCGA-32-2634    TCGA-32-2638 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-4208    TCGA-32-4209    TCGA-32-4210    TCGA-32-4211    TCGA-32-4213 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-5651    TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-74-6578    TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6664    TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  WRN MUTATED        1      0      0
  WRN WILD-TYPE    137     61     76
D72V4, multiclass
[1] "Remove cluster labels:" "WRN MUTATED"           
clus
  WRN MUTATED WRN WILD-TYPE 
            1           274 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697    TCGA-06-6698 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-08-0386    TCGA-12-0616 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692    TCGA-12-0821 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652    TCGA-12-3653 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0740    TCGA-14-0781 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0817    TCGA-14-0862    TCGA-14-0871    TCGA-14-1043    TCGA-14-1395 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-1450    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825    TCGA-14-1829 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742    TCGA-15-1444 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048    TCGA-19-1390 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953    TCGA-19-5954 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174    TCGA-27-1830 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834    TCGA-27-1835 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518    TCGA-27-2519 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2521    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526    TCGA-27-2527 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2502    TCGA-28-2509 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-2510    TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213    TCGA-28-5214 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219    TCGA-28-5220 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-6450    TCGA-32-1970    TCGA-32-1977    TCGA-32-1979    TCGA-32-1980 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-2491    TCGA-32-2494 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-2495    TCGA-32-2615    TCGA-32-2632    TCGA-32-2634    TCGA-32-2638 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-4208    TCGA-32-4209    TCGA-32-4210    TCGA-32-4211    TCGA-32-4213 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-5651    TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-74-6578    TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6664    TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  WRN MUTATED        1      5      0
  WRN WILD-TYPE    294    476      7
D72V5, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           1           294
  CLUS_2           5           476
  CLUS_3           0             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WRN MUTATED        1      0      0      4
  WRN WILD-TYPE    159    232     64    162
D72V6, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           1           159
  CLUS_2           0           232
  CLUS_3           0            64
  CLUS_4           4           162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  WRN MUTATED        2      2      2
  WRN WILD-TYPE    225    233    190
D72V7, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           2           225
  CLUS_2           2           233
  CLUS_3           2           190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  WRN MUTATED        1      1      4
  WRN WILD-TYPE    195    189    264
D72V8, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           1           195
  CLUS_2           1           189
  CLUS_3           4           264
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WRN MUTATED        0      1      1      3
  WRN WILD-TYPE    136    106    182     80
D72V9, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           0           136
  CLUS_2           1           106
  CLUS_3           1           182
  CLUS_4           3            80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  WRN MUTATED        2      2      1
  WRN WILD-TYPE    220    182    102
D72V10, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           2           220
  CLUS_2           2           182
  CLUS_3           1           102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  WRN MUTATED        0      4      1
  WRN WILD-TYPE    184    158    158
D72V11, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           0           184
  CLUS_2           4           158
  CLUS_3           1           158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WRN MUTATED        0      3      2      0
  WRN WILD-TYPE     90    135    186     89
D72V12, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           0            90
  CLUS_2           3           135
  CLUS_3           2           186
  CLUS_4           0            89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(73) Variable = G6PC MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  G6PC MUTATED        0      1      0      0
  G6PC WILD-TYPE     69     42     74     54
D73V1, multiclass
[1] "Remove cluster labels:" "G6PC MUTATED"          
clus
  G6PC MUTATED G6PC WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2623     TCGA-19-2624 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2629     TCGA-19-2631     TCGA-19-4068 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5139     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-2501     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5213     TCGA-28-5214 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-4213     TCGA-32-4719     TCGA-41-2571     TCGA-41-2572 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  G6PC MUTATED        0      1      0      0
  G6PC WILD-TYPE     63     49     48     79
D73V2, multiclass
[1] "Remove cluster labels:" "G6PC MUTATED"          
clus
  G6PC MUTATED G6PC WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2623     TCGA-19-2624 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2629     TCGA-19-2631     TCGA-19-4068 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5139     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-2501     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5213     TCGA-28-5214 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-4213     TCGA-32-4719     TCGA-41-2571     TCGA-41-2572 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  G6PC MUTATED        0      1      0      0
  G6PC WILD-TYPE     77     92     45     60
D73V3, multiclass
[1] "Remove cluster labels:" "G6PC MUTATED"          
clus
  G6PC MUTATED G6PC WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5139     TCGA-26-6173     TCGA-26-6174     TCGA-27-1830 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2502     TCGA-28-2509 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  G6PC MUTATED        0      0      1
  G6PC WILD-TYPE    138     61     75
D73V4, multiclass
[1] "Remove cluster labels:" "G6PC MUTATED"          
clus
  G6PC MUTATED G6PC WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5139     TCGA-26-6173     TCGA-26-6174     TCGA-27-1830 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2502     TCGA-28-2509 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  G6PC MUTATED        2      5      0
  G6PC WILD-TYPE    293    476      7
D73V5, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            2            293
  CLUS_2            5            476
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  G6PC MUTATED        4      1      0      2
  G6PC WILD-TYPE    156    231     64    164
D73V6, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            4            156
  CLUS_2            1            231
  CLUS_3            0             64
  CLUS_4            2            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  G6PC MUTATED        2      2      3
  G6PC WILD-TYPE    225    233    189
D73V7, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            2            225
  CLUS_2            2            233
  CLUS_3            3            189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  G6PC MUTATED        2      2      3
  G6PC WILD-TYPE    194    188    265
D73V8, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            2            194
  CLUS_2            2            188
  CLUS_3            3            265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  G6PC MUTATED        0      2      3      1
  G6PC WILD-TYPE    136    105    180     82
D73V9, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            0            136
  CLUS_2            2            105
  CLUS_3            3            180
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  G6PC MUTATED        1      2      3
  G6PC WILD-TYPE    221    182    100
D73V10, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            1            221
  CLUS_2            2            182
  CLUS_3            3            100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  G6PC MUTATED        1      1      4
  G6PC WILD-TYPE    183    161    155
D73V11, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            1            183
  CLUS_2            1            161
  CLUS_3            4            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  G6PC MUTATED        1      1      2      2
  G6PC WILD-TYPE     89    137    186     87
D73V12, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            1             89
  CLUS_2            1            137
  CLUS_3            2            186
  CLUS_4            2             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(74) Variable = TMEM184A MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM184A MUTATED        0      0      0      0
  TMEM184A WILD-TYPE     69     43     74     54
D74V1, multiclass
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM184A MUTATED        0      0      0      0
  TMEM184A WILD-TYPE     63     50     48     79
D74V2, multiclass
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM184A MUTATED        0      0      0      0
  TMEM184A WILD-TYPE     77     93     45     60
D74V3, multiclass
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM184A MUTATED        0      0      0
  TMEM184A WILD-TYPE    138     61     76
D74V4, multiclass
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM184A MUTATED        1      2      0
  TMEM184A WILD-TYPE    294    479      7
D74V5, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                1                294
  CLUS_2                2                479
  CLUS_3                0                  7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM184A MUTATED        1      0      0      2
  TMEM184A WILD-TYPE    159    232     64    164
D74V6, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                1                159
  CLUS_2                0                232
  CLUS_3                0                 64
  CLUS_4                2                164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM184A MUTATED        1      0      2
  TMEM184A WILD-TYPE    226    235    190
D74V7, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                1                226
  CLUS_2                0                235
  CLUS_3                2                190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM184A MUTATED        1      0      2
  TMEM184A WILD-TYPE    195    190    266
D74V8, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                1                195
  CLUS_2                0                190
  CLUS_3                2                266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM184A MUTATED        1      0      2      0
  TMEM184A WILD-TYPE    135    107    181     83
D74V9, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                1                135
  CLUS_2                0                107
  CLUS_3                2                181
  CLUS_4                0                 83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM184A MUTATED        0      2      1
  TMEM184A WILD-TYPE    222    182    102
D74V10, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                0                222
  CLUS_2                2                182
  CLUS_3                1                102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM184A MUTATED        1      0      2
  TMEM184A WILD-TYPE    183    162    157
D74V11, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                1                183
  CLUS_2                0                162
  CLUS_3                2                157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM184A MUTATED        0      0      2      1
  TMEM184A WILD-TYPE     90    138    186     88
D74V12, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                0                 90
  CLUS_2                0                138
  CLUS_3                2                186
  CLUS_4                1                 88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(75) Variable = PDHA1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDHA1 MUTATED        0      0      1      0
  PDHA1 WILD-TYPE     69     43     73     54
D75V1, multiclass
[1] "Remove cluster labels:" "PDHA1 MUTATED"         
clus
  PDHA1 MUTATED PDHA1 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDHA1 MUTATED        0      0      0      1
  PDHA1 WILD-TYPE     63     50     48     78
D75V2, multiclass
[1] "Remove cluster labels:" "PDHA1 MUTATED"         
clus
  PDHA1 MUTATED PDHA1 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDHA1 MUTATED        0      0      0      1
  PDHA1 WILD-TYPE     77     93     45     59
D75V3, multiclass
[1] "Remove cluster labels:" "PDHA1 MUTATED"         
clus
  PDHA1 MUTATED PDHA1 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2629 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDHA1 MUTATED        0      1      0
  PDHA1 WILD-TYPE    138     60     76
D75V4, multiclass
[1] "Remove cluster labels:" "PDHA1 MUTATED"         
clus
  PDHA1 MUTATED PDHA1 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2629 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDHA1 MUTATED        2      4      0
  PDHA1 WILD-TYPE    293    477      7
D75V5, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             2             293
  CLUS_2             4             477
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDHA1 MUTATED        1      1      0      3
  PDHA1 WILD-TYPE    159    231     64    163
D75V6, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             1             159
  CLUS_2             1             231
  CLUS_3             0              64
  CLUS_4             3             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDHA1 MUTATED        2      3      1
  PDHA1 WILD-TYPE    225    232    191
D75V7, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             2             225
  CLUS_2             3             232
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDHA1 MUTATED        2      1      3
  PDHA1 WILD-TYPE    194    189    265
D75V8, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             1             189
  CLUS_3             3             265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDHA1 MUTATED        2      1      2      0
  PDHA1 WILD-TYPE    134    106    181     83
D75V9, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             2             134
  CLUS_2             1             106
  CLUS_3             2             181
  CLUS_4             0              83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDHA1 MUTATED        3      1      1
  PDHA1 WILD-TYPE    219    183    102
D75V10, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             3             219
  CLUS_2             1             183
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDHA1 MUTATED        1      3      1
  PDHA1 WILD-TYPE    183    159    158
D75V11, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             1             183
  CLUS_2             3             159
  CLUS_3             1             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDHA1 MUTATED        0      3      1      1
  PDHA1 WILD-TYPE     90    135    187     88
D75V12, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             3             135
  CLUS_3             1             187
  CLUS_4             1              88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(76) Variable = TMEM229B MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM229B MUTATED        0      1      1      1
  TMEM229B WILD-TYPE     69     42     73     53
D76V1, multiclass
        clus
vv       TMEM229B MUTATED TMEM229B WILD-TYPE
  CLUS_1                0                 69
  CLUS_2                1                 42
  CLUS_3                1                 73
  CLUS_4                1                 53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM229B MUTATED        0      0      1      2
  TMEM229B WILD-TYPE     63     50     47     77
D76V2, multiclass
        clus
vv       TMEM229B MUTATED TMEM229B WILD-TYPE
  CLUS_1                0                 63
  CLUS_2                0                 50
  CLUS_3                1                 47
  CLUS_4                2                 77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM229B MUTATED        0      2      1      0
  TMEM229B WILD-TYPE     77     91     44     60
D76V3, multiclass
        clus
vv       TMEM229B MUTATED TMEM229B WILD-TYPE
  CLUS_1                0                 77
  CLUS_2                2                 91
  CLUS_3                1                 44
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM229B MUTATED        2      1      0
  TMEM229B WILD-TYPE    136     60     76
D76V4, multiclass
        clus
vv       TMEM229B MUTATED TMEM229B WILD-TYPE
  CLUS_1                2                136
  CLUS_2                1                 60
  CLUS_3                0                 76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM229B MUTATED        3      1      0
  TMEM229B WILD-TYPE    292    480      7
D76V5, multiclass
        clus
vv       TMEM229B MUTATED TMEM229B WILD-TYPE
  CLUS_1                3                292
  CLUS_2                1                480
  CLUS_3                0                  7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM229B MUTATED        3      0      0      0
  TMEM229B WILD-TYPE    157    232     64    166
D76V6, multiclass
        clus
vv       TMEM229B MUTATED TMEM229B WILD-TYPE
  CLUS_1                3                157
  CLUS_2                0                232
  CLUS_3                0                 64
  CLUS_4                0                166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM229B MUTATED        2      0      0
  TMEM229B WILD-TYPE    225    235    192
D76V7, multiclass
[1] "Remove cluster labels:" "TMEM229B MUTATED"      
clus
  TMEM229B MUTATED TMEM229B WILD-TYPE 
                 2                652 
        TCGA-02-0047         TCGA-02-0055         TCGA-02-2483 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-02-2485         TCGA-02-2486         TCGA-06-0129 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0130         TCGA-06-0132         TCGA-06-0141 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0157         TCGA-06-0158         TCGA-06-0168 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0174         TCGA-06-0178         TCGA-06-0184 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0219         TCGA-06-0238         TCGA-06-0644 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0645         TCGA-06-0646         TCGA-06-0649 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0686         TCGA-06-0743         TCGA-06-0744 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0745         TCGA-06-0747         TCGA-06-0749 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0750         TCGA-06-0878         TCGA-06-0882 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-1804         TCGA-06-2557         TCGA-06-2558 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-2559         TCGA-06-2561         TCGA-06-2562 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-2563         TCGA-06-2564         TCGA-06-2565 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-2567         TCGA-06-2569         TCGA-06-2570 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-5408         TCGA-06-5410         TCGA-06-5411 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-5412         TCGA-06-5414         TCGA-06-5415 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-5417         TCGA-06-5418         TCGA-06-5856 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-5858         TCGA-06-5859         TCGA-08-0386 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-12-0616         TCGA-12-0618         TCGA-12-0619 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-12-0821         TCGA-12-1597         TCGA-12-3650 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-12-3652         TCGA-12-3653         TCGA-12-5295 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-12-5299         TCGA-14-0781         TCGA-14-0787 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-14-0789         TCGA-14-0790         TCGA-14-0817 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-14-1823         TCGA-14-1825         TCGA-14-1829 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-14-2554         TCGA-15-0742         TCGA-15-1444 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-16-0846         TCGA-16-1045         TCGA-19-1390 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-19-2619         TCGA-19-2620         TCGA-19-2624 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-19-2625         TCGA-19-2629         TCGA-19-5960 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-26-1442         TCGA-26-5132         TCGA-26-5133 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-26-5134         TCGA-26-5135         TCGA-26-5136 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-26-5139         TCGA-27-1830         TCGA-27-1831 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-27-1832         TCGA-27-1834         TCGA-27-1835 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-27-1837         TCGA-27-2519         TCGA-27-2521 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-27-2523         TCGA-27-2524         TCGA-27-2526 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-27-2528         TCGA-28-1747         TCGA-28-1753 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-28-2499         TCGA-28-2509         TCGA-28-2510 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-28-2513         TCGA-28-2514         TCGA-28-5204 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-28-5207         TCGA-28-5208         TCGA-28-5209 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-28-5213         TCGA-28-5215         TCGA-28-5216 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-28-5218         TCGA-28-5220         TCGA-32-1970 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-32-1980         TCGA-32-1982         TCGA-32-2615 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-32-2632         TCGA-32-2634         TCGA-32-2638 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-32-4213         TCGA-32-5222         TCGA-41-2571 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-41-2572         TCGA-41-3915         TCGA-41-4097 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-41-5651         TCGA-76-4925         TCGA-76-4926 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-76-4927         TCGA-76-4928         TCGA-76-4929 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-76-4931         TCGA-76-4932         TCGA-CS-4938 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-4941         TCGA-CS-4942         TCGA-CS-4943 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-4944         TCGA-CS-5390         TCGA-CS-5393 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-5394         TCGA-CS-5395         TCGA-CS-5396 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-5397         TCGA-CS-6186         TCGA-CS-6188 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6290         TCGA-CS-6665         TCGA-CS-6666 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6667         TCGA-CS-6668         TCGA-CS-6669 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6670         TCGA-DB-5270         TCGA-DB-5273 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5274         TCGA-DB-5275         TCGA-DB-5276 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5277         TCGA-DB-5278         TCGA-DB-5279 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5280         TCGA-DB-5281         TCGA-DB-A4X9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4XA         TCGA-DB-A4XB         TCGA-DB-A4XC 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4XD         TCGA-DB-A4XE         TCGA-DB-A4XF 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4XG         TCGA-DB-A4XH         TCGA-DB-A64L 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64O         TCGA-DB-A64P         TCGA-DB-A64Q 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64R         TCGA-DB-A64S         TCGA-DB-A64U 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64V         TCGA-DB-A64W         TCGA-DB-A64X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A75K         TCGA-DB-A75L         TCGA-DB-A75M 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A75O         TCGA-DB-A75P         TCGA-DH-5140 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-5141         TCGA-DH-5142         TCGA-DH-5143 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-5144         TCGA-DH-A669         TCGA-DH-A66B 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A66D         TCGA-DH-A66F         TCGA-DH-A66G 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A7UR         TCGA-DH-A7US         TCGA-DH-A7UT 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A7UU         TCGA-DH-A7UV         TCGA-DU-5847 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5849         TCGA-DU-5851         TCGA-DU-5852 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5853         TCGA-DU-5854         TCGA-DU-5855 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5870         TCGA-DU-5871         TCGA-DU-5872 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5874         TCGA-DU-6392         TCGA-DU-6393 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6394         TCGA-DU-6395         TCGA-DU-6396 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6397         TCGA-DU-6399         TCGA-DU-6400 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6401         TCGA-DU-6402         TCGA-DU-6403 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6404         TCGA-DU-6405         TCGA-DU-6406 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6407         TCGA-DU-6408         TCGA-DU-6410 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6542         TCGA-DU-7006         TCGA-DU-7007 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7008         TCGA-DU-7009         TCGA-DU-7010 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7011         TCGA-DU-7012         TCGA-DU-7013 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7015         TCGA-DU-7018         TCGA-DU-7019 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7290         TCGA-DU-7292         TCGA-DU-7294 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7298         TCGA-DU-7299         TCGA-DU-7300 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7301         TCGA-DU-7302         TCGA-DU-7304 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7306         TCGA-DU-7309         TCGA-DU-8158 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8161         TCGA-DU-8162         TCGA-DU-8163 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8164         TCGA-DU-8165         TCGA-DU-8166 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8167         TCGA-DU-8168         TCGA-DU-A5TP 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A5TR         TCGA-DU-A5TS         TCGA-DU-A5TT 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A5TU         TCGA-DU-A5TW         TCGA-DU-A5TY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A6S2         TCGA-DU-A6S3         TCGA-DU-A6S6 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A6S7         TCGA-DU-A6S8         TCGA-DU-A76K 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A76L         TCGA-DU-A76O         TCGA-DU-A76R 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A7T6         TCGA-DU-A7T8         TCGA-DU-A7TA 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A7TB         TCGA-DU-A7TC         TCGA-DU-A7TD 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A7TG         TCGA-DU-A7TJ         TCGA-E1-5302 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5303         TCGA-E1-5304         TCGA-E1-5305 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5307         TCGA-E1-5311         TCGA-E1-5318 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5319         TCGA-E1-5322         TCGA-E1-A7YD 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YE         TCGA-E1-A7YH         TCGA-E1-A7YI 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YJ         TCGA-E1-A7YK         TCGA-E1-A7YL 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YM         TCGA-E1-A7YN         TCGA-E1-A7YO 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YQ         TCGA-E1-A7YS         TCGA-E1-A7YU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YV         TCGA-E1-A7YW         TCGA-E1-A7YY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7Z2         TCGA-E1-A7Z3         TCGA-E1-A7Z4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7Z6         TCGA-EZ-7264         TCGA-F6-A8O3 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-F6-A8O4         TCGA-FG-5962         TCGA-FG-5963 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-5964         TCGA-FG-5965         TCGA-FG-6688 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-6689         TCGA-FG-6690         TCGA-FG-6691 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-6692         TCGA-FG-7634         TCGA-FG-7636 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-7637         TCGA-FG-7638         TCGA-FG-7641 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-7643         TCGA-FG-8181         TCGA-FG-8182 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8185         TCGA-FG-8186         TCGA-FG-8187 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8188         TCGA-FG-8189         TCGA-FG-8191 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A4MT         TCGA-FG-A4MU         TCGA-FG-A4MW 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A4MX         TCGA-FG-A4MY         TCGA-FG-A60J 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A60K         TCGA-FG-A60L         TCGA-FG-A6IZ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A6J1         TCGA-FG-A6J3         TCGA-FG-A70Y 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A70Z         TCGA-FG-A710         TCGA-FG-A711 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A713         TCGA-FG-A87N         TCGA-FG-A87Q 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FN-7833         TCGA-HT-7467         TCGA-HT-7468 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7469         TCGA-HT-7470         TCGA-HT-7471 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7472         TCGA-HT-7473         TCGA-HT-7474 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7475         TCGA-HT-7476         TCGA-HT-7477 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7478         TCGA-HT-7479         TCGA-HT-7480 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7481         TCGA-HT-7482         TCGA-HT-7483 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7485         TCGA-HT-7601         TCGA-HT-7602 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7603         TCGA-HT-7604         TCGA-HT-7605 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7606         TCGA-HT-7607         TCGA-HT-7608 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7609         TCGA-HT-7610         TCGA-HT-7611 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7616         TCGA-HT-7620         TCGA-HT-7676 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7677         TCGA-HT-7680         TCGA-HT-7681 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7684         TCGA-HT-7686         TCGA-HT-7687 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7688         TCGA-HT-7689         TCGA-HT-7690 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7691         TCGA-HT-7692         TCGA-HT-7693 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7694         TCGA-HT-7695         TCGA-HT-7854 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7855         TCGA-HT-7856         TCGA-HT-7857 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7858         TCGA-HT-7860         TCGA-HT-7873 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7874         TCGA-HT-7875         TCGA-HT-7877 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7879         TCGA-HT-7880         TCGA-HT-7881 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7882         TCGA-HT-7884         TCGA-HT-7902 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8010         TCGA-HT-8012         TCGA-HT-8013 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8015         TCGA-HT-8018         TCGA-HT-8019 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8104         TCGA-HT-8105         TCGA-HT-8106 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8107         TCGA-HT-8108         TCGA-HT-8109 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8110         TCGA-HT-8111         TCGA-HT-8113 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8114         TCGA-HT-8558         TCGA-HT-8563 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8564         TCGA-HT-A4DS         TCGA-HT-A4DV 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A5R5         TCGA-HT-A5R7         TCGA-HT-A5R9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A5RA         TCGA-HT-A5RB         TCGA-HT-A5RC 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A614         TCGA-HT-A615         TCGA-HT-A616 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A617         TCGA-HT-A618         TCGA-HT-A619 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A61A         TCGA-HT-A61B         TCGA-HT-A61C 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A74H         TCGA-HT-A74J         TCGA-HT-A74K 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A74L         TCGA-HT-A74O         TCGA-HW-7486 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-7487         TCGA-HW-7489         TCGA-HW-7490 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-7491         TCGA-HW-7495         TCGA-HW-8319 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-8320         TCGA-HW-8321         TCGA-HW-8322 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-A5KJ         TCGA-HW-A5KK         TCGA-HW-A5KL 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-A5KM         TCGA-IK-7675         TCGA-IK-8125 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-KT-A74X         TCGA-KT-A7W1         TCGA-P5-A5ET 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5EU         TCGA-P5-A5EV         TCGA-P5-A5EW 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5EX         TCGA-P5-A5EY         TCGA-P5-A5EZ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5F0         TCGA-P5-A5F1         TCGA-P5-A5F2 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5F4         TCGA-P5-A5F6         TCGA-P5-A72U 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A72W         TCGA-P5-A72X         TCGA-P5-A72Z 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A730         TCGA-P5-A731         TCGA-P5-A733 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A735         TCGA-P5-A736         TCGA-P5-A737 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A77W         TCGA-P5-A77X         TCGA-P5-A780 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A781         TCGA-QH-A65R         TCGA-QH-A65S 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A65V         TCGA-QH-A65X         TCGA-QH-A65Z 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6CS         TCGA-QH-A6CU         TCGA-QH-A6CV 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6CW         TCGA-QH-A6CX         TCGA-QH-A6CY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6CZ         TCGA-QH-A6X3         TCGA-QH-A6X4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6X5         TCGA-QH-A6X8         TCGA-QH-A6X9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6XA         TCGA-QH-A6XC         TCGA-QH-A86X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A870         TCGA-R8-A6MK         TCGA-R8-A6ML 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-R8-A6MO         TCGA-R8-A6YH         TCGA-R8-A73M 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A83X         TCGA-RY-A83Y         TCGA-RY-A83Z 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A840         TCGA-RY-A843         TCGA-RY-A845 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A847         TCGA-S9-A6TS         TCGA-S9-A6TU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6TV         TCGA-S9-A6TW         TCGA-S9-A6TX 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6TY         TCGA-S9-A6TZ         TCGA-S9-A6U0 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6U1         TCGA-S9-A6U2         TCGA-S9-A6U5 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6U6         TCGA-S9-A6U8         TCGA-S9-A6U9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6UA         TCGA-S9-A6UB         TCGA-S9-A6WD 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WE         TCGA-S9-A6WG         TCGA-S9-A6WH 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WI         TCGA-S9-A6WL         TCGA-S9-A6WM 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WN         TCGA-S9-A6WO         TCGA-S9-A6WP 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WQ         TCGA-S9-A7IQ         TCGA-S9-A7IS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7IX         TCGA-S9-A7IY         TCGA-S9-A7IZ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7J0         TCGA-S9-A7J1         TCGA-S9-A7J2 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7J3         TCGA-S9-A7QW         TCGA-S9-A7QX 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7QY         TCGA-S9-A7QZ         TCGA-S9-A7R1 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7R2         TCGA-S9-A7R3         TCGA-S9-A7R4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7R7         TCGA-S9-A7R8         TCGA-S9-A89V 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A89Z         TCGA-TM-A7C3         TCGA-TM-A7C4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A7C5         TCGA-TM-A7CA         TCGA-TM-A7CF 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84B         TCGA-TM-A84C         TCGA-TM-A84F 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84G         TCGA-TM-A84H         TCGA-TM-A84I 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84J         TCGA-TM-A84L         TCGA-TM-A84M 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84O         TCGA-TM-A84Q         TCGA-TM-A84R 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84S         TCGA-TM-A84T         TCGA-TQ-A7RF 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RG         TCGA-TQ-A7RH         TCGA-TQ-A7RI 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RJ         TCGA-TQ-A7RK         TCGA-TQ-A7RM 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RN         TCGA-TQ-A7RO         TCGA-TQ-A7RP 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RQ         TCGA-TQ-A7RR         TCGA-TQ-A7RS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RU         TCGA-TQ-A7RV         TCGA-TQ-A7RW 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A8XE         TCGA-VM-A8C8         TCGA-VM-A8C9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VM-A8CA         TCGA-VM-A8CB         TCGA-VM-A8CD 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VM-A8CE         TCGA-VM-A8CF         TCGA-VM-A8CH 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VV-A829         TCGA-VV-A86M         TCGA-VW-A7QS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VW-A8FI         TCGA-W9-A837         TCGA-WH-A86K 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A858         TCGA-WY-A859         TCGA-WY-A85A 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A85B         TCGA-WY-A85C         TCGA-WY-A85D 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A85E 
"TMEM229B WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM229B MUTATED        2      0      0
  TMEM229B WILD-TYPE    194    190    268
D76V8, multiclass
[1] "Remove cluster labels:" "TMEM229B MUTATED"      
clus
  TMEM229B MUTATED TMEM229B WILD-TYPE 
                 2                652 
        TCGA-02-0047         TCGA-02-0055         TCGA-02-2483 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-02-2485         TCGA-02-2486         TCGA-06-0129 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0130         TCGA-06-0132         TCGA-06-0141 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0157         TCGA-06-0158         TCGA-06-0168 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0174         TCGA-06-0178         TCGA-06-0184 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0219         TCGA-06-0238         TCGA-06-0644 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0645         TCGA-06-0646         TCGA-06-0649 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0686         TCGA-06-0743         TCGA-06-0744 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0745         TCGA-06-0747         TCGA-06-0749 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-0750         TCGA-06-0878         TCGA-06-0882 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-1804         TCGA-06-2557         TCGA-06-2558 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-2559         TCGA-06-2561         TCGA-06-2562 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-2563         TCGA-06-2564         TCGA-06-2565 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-2567         TCGA-06-2569         TCGA-06-2570 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-5408         TCGA-06-5410         TCGA-06-5411 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-5412         TCGA-06-5414         TCGA-06-5415 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-5417         TCGA-06-5418         TCGA-06-5856 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-06-5858         TCGA-06-5859         TCGA-08-0386 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-12-0616         TCGA-12-0618         TCGA-12-0619 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-12-0821         TCGA-12-1597         TCGA-12-3650 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-12-3652         TCGA-12-3653         TCGA-12-5295 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-12-5299         TCGA-14-0781         TCGA-14-0787 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-14-0789         TCGA-14-0790         TCGA-14-0817 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-14-1823         TCGA-14-1825         TCGA-14-1829 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-14-2554         TCGA-15-0742         TCGA-15-1444 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-16-0846         TCGA-16-1045         TCGA-19-1390 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-19-2619         TCGA-19-2620         TCGA-19-2624 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-19-2625         TCGA-19-2629         TCGA-19-5960 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-26-5134         TCGA-26-5135         TCGA-26-5136 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-27-1832         TCGA-27-1834         TCGA-27-1835 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-27-1837         TCGA-27-2519         TCGA-27-2521 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-27-2523         TCGA-27-2524         TCGA-27-2526 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-27-2528         TCGA-28-1747         TCGA-28-1753 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-28-2499         TCGA-28-2509         TCGA-28-2510 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-28-2513         TCGA-28-2514         TCGA-28-5204 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-28-5207         TCGA-28-5208         TCGA-28-5209 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-28-5213         TCGA-28-5215         TCGA-28-5216 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-28-5218         TCGA-28-5220         TCGA-32-1970 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-32-1980         TCGA-32-1982         TCGA-32-2615 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-32-2632         TCGA-32-2634         TCGA-32-2638 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7301         TCGA-DU-7302         TCGA-DU-7304 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A5TR         TCGA-DU-A5TS         TCGA-DU-A5TT 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A5TU         TCGA-DU-A5TW         TCGA-DU-A5TY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A76L         TCGA-DU-A76O         TCGA-DU-A76R 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A7TG         TCGA-DU-A7TJ         TCGA-E1-5302 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-F6-A8O4         TCGA-FG-5962         TCGA-FG-5963 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-5964         TCGA-FG-5965         TCGA-FG-6688 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8185         TCGA-FG-8186         TCGA-FG-8187 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A4MX         TCGA-FG-A4MY         TCGA-FG-A60J 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A6J1         TCGA-FG-A6J3         TCGA-FG-A70Y 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
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"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5EX         TCGA-P5-A5EY         TCGA-P5-A5EZ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5F0         TCGA-P5-A5F1         TCGA-P5-A5F2 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5F4         TCGA-P5-A5F6         TCGA-P5-A72U 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A72W         TCGA-P5-A72X         TCGA-P5-A72Z 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A730         TCGA-P5-A731         TCGA-P5-A733 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A735         TCGA-P5-A736         TCGA-P5-A737 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A77W         TCGA-P5-A77X         TCGA-P5-A780 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A781         TCGA-QH-A65R         TCGA-QH-A65S 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A65V         TCGA-QH-A65X         TCGA-QH-A65Z 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6CS         TCGA-QH-A6CU         TCGA-QH-A6CV 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6CW         TCGA-QH-A6CX         TCGA-QH-A6CY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6CZ         TCGA-QH-A6X3         TCGA-QH-A6X4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6X5         TCGA-QH-A6X8         TCGA-QH-A6X9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6XA         TCGA-QH-A6XC         TCGA-QH-A86X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A870         TCGA-R8-A6MK         TCGA-R8-A6ML 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-R8-A6MO         TCGA-R8-A6YH         TCGA-R8-A73M 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A83X         TCGA-RY-A83Y         TCGA-RY-A83Z 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A840         TCGA-RY-A843         TCGA-RY-A845 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A847         TCGA-S9-A6TS         TCGA-S9-A6TU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6TV         TCGA-S9-A6TW         TCGA-S9-A6TX 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6TY         TCGA-S9-A6TZ         TCGA-S9-A6U0 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6U1         TCGA-S9-A6U2         TCGA-S9-A6U5 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6U6         TCGA-S9-A6U8         TCGA-S9-A6U9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6UA         TCGA-S9-A6UB         TCGA-S9-A6WD 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WE         TCGA-S9-A6WG         TCGA-S9-A6WH 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WI         TCGA-S9-A6WL         TCGA-S9-A6WM 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WN         TCGA-S9-A6WO         TCGA-S9-A6WP 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WQ         TCGA-S9-A7IQ         TCGA-S9-A7IS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7IX         TCGA-S9-A7IY         TCGA-S9-A7IZ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7J0         TCGA-S9-A7J1         TCGA-S9-A7J2 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7J3         TCGA-S9-A7QW         TCGA-S9-A7QX 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7QY         TCGA-S9-A7QZ         TCGA-S9-A7R1 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7R2         TCGA-S9-A7R3         TCGA-S9-A7R4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7R7         TCGA-S9-A7R8         TCGA-S9-A89V 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A89Z         TCGA-TM-A7C3         TCGA-TM-A7C4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A7C5         TCGA-TM-A7CA         TCGA-TM-A7CF 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84B         TCGA-TM-A84C         TCGA-TM-A84F 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84G         TCGA-TM-A84H         TCGA-TM-A84I 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84J         TCGA-TM-A84L         TCGA-TM-A84M 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84O         TCGA-TM-A84Q         TCGA-TM-A84R 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84S         TCGA-TM-A84T         TCGA-TQ-A7RF 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RG         TCGA-TQ-A7RH         TCGA-TQ-A7RI 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RJ         TCGA-TQ-A7RK         TCGA-TQ-A7RM 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RN         TCGA-TQ-A7RO         TCGA-TQ-A7RP 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RQ         TCGA-TQ-A7RR         TCGA-TQ-A7RS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RU         TCGA-TQ-A7RV         TCGA-TQ-A7RW 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A8XE         TCGA-VM-A8C8         TCGA-VM-A8C9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VM-A8CA         TCGA-VM-A8CB         TCGA-VM-A8CD 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VM-A8CE         TCGA-VM-A8CF         TCGA-VM-A8CH 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VV-A829         TCGA-VV-A86M         TCGA-VW-A7QS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VW-A8FI         TCGA-W9-A837         TCGA-WH-A86K 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A858         TCGA-WY-A859         TCGA-WY-A85A 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A85B         TCGA-WY-A85C         TCGA-WY-A85D 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A85E 
"TMEM229B WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM229B MUTATED        1      0      0      0
  TMEM229B WILD-TYPE    135    107    183     83
D76V9, multiclass
[1] "Remove cluster labels:" "TMEM229B MUTATED"      
clus
  TMEM229B MUTATED TMEM229B WILD-TYPE 
                 1                508 
        TCGA-CS-4938         TCGA-CS-4941         TCGA-CS-4942 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-4943         TCGA-CS-4944         TCGA-CS-5390 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-5393         TCGA-CS-5394         TCGA-CS-5395 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-5396         TCGA-CS-5397         TCGA-CS-6186 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6188         TCGA-CS-6290         TCGA-CS-6665 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6666         TCGA-CS-6667         TCGA-CS-6668 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6669         TCGA-CS-6670         TCGA-DB-5270 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5273         TCGA-DB-5274         TCGA-DB-5275 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5276         TCGA-DB-5277         TCGA-DB-5278 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5279         TCGA-DB-5280         TCGA-DB-5281 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4X9         TCGA-DB-A4XA         TCGA-DB-A4XB 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4XC         TCGA-DB-A4XD         TCGA-DB-A4XE 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4XF         TCGA-DB-A4XG         TCGA-DB-A4XH 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64L         TCGA-DB-A64O         TCGA-DB-A64P 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64Q         TCGA-DB-A64R         TCGA-DB-A64S 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64U         TCGA-DB-A64V         TCGA-DB-A64W 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64X         TCGA-DB-A75K         TCGA-DB-A75L 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A75O         TCGA-DB-A75P         TCGA-DH-5140 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-5141         TCGA-DH-5142         TCGA-DH-5143 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-5144         TCGA-DH-A669         TCGA-DH-A66B 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A66D         TCGA-DH-A66F         TCGA-DH-A66G 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A7UR         TCGA-DH-A7US         TCGA-DH-A7UT 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A7UU         TCGA-DH-A7UV         TCGA-DU-5847 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5849         TCGA-DU-5851         TCGA-DU-5852 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5853         TCGA-DU-5854         TCGA-DU-5855 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5870         TCGA-DU-5871         TCGA-DU-5872 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5874         TCGA-DU-6392         TCGA-DU-6393 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6394         TCGA-DU-6395         TCGA-DU-6396 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6397         TCGA-DU-6399         TCGA-DU-6400 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6401         TCGA-DU-6402         TCGA-DU-6403 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6404         TCGA-DU-6405         TCGA-DU-6406 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6407         TCGA-DU-6408         TCGA-DU-6410 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6542         TCGA-DU-7006         TCGA-DU-7007 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7008         TCGA-DU-7009         TCGA-DU-7010 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7012         TCGA-DU-7013         TCGA-DU-7015 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7018         TCGA-DU-7019         TCGA-DU-7290 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7292         TCGA-DU-7294         TCGA-DU-7298 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7299         TCGA-DU-7300         TCGA-DU-7301 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7302         TCGA-DU-7304         TCGA-DU-7306 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7309         TCGA-DU-8158         TCGA-DU-8161 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8162         TCGA-DU-8163         TCGA-DU-8164 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8165         TCGA-DU-8166         TCGA-DU-8167 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8168         TCGA-DU-A5TP         TCGA-DU-A5TR 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A5TS         TCGA-DU-A5TT         TCGA-DU-A5TU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A5TW         TCGA-DU-A5TY         TCGA-DU-A6S2 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A6S3         TCGA-DU-A6S6         TCGA-DU-A6S7 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A6S8         TCGA-DU-A76K         TCGA-DU-A76L 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A76O         TCGA-DU-A76R         TCGA-DU-A7T6 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A7T8         TCGA-DU-A7TA         TCGA-DU-A7TB 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A7TC         TCGA-DU-A7TD         TCGA-DU-A7TG 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A7TJ         TCGA-E1-5302         TCGA-E1-5303 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5304         TCGA-E1-5305         TCGA-E1-5307 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5311         TCGA-E1-5318         TCGA-E1-5319 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5322         TCGA-E1-A7YD         TCGA-E1-A7YE 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YH         TCGA-E1-A7YI         TCGA-E1-A7YJ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YK         TCGA-E1-A7YL         TCGA-E1-A7YM 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YN         TCGA-E1-A7YO         TCGA-E1-A7YQ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YS         TCGA-E1-A7YU         TCGA-E1-A7YV 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YW         TCGA-E1-A7YY         TCGA-E1-A7Z2 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7Z3         TCGA-E1-A7Z4         TCGA-E1-A7Z6 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-EZ-7264         TCGA-F6-A8O3         TCGA-F6-A8O4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-5962         TCGA-FG-5963         TCGA-FG-5964 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-5965         TCGA-FG-6688         TCGA-FG-6689 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-6690         TCGA-FG-6691         TCGA-FG-6692 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-7634         TCGA-FG-7636         TCGA-FG-7637 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-7638         TCGA-FG-7641         TCGA-FG-7643 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8181         TCGA-FG-8182         TCGA-FG-8185 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8186         TCGA-FG-8187         TCGA-FG-8188 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8189         TCGA-FG-8191         TCGA-FG-A4MT 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A4MU         TCGA-FG-A4MW         TCGA-FG-A4MX 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A4MY         TCGA-FG-A60J         TCGA-FG-A60K 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A60L         TCGA-FG-A6IZ         TCGA-FG-A6J1 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A6J3         TCGA-FG-A70Y         TCGA-FG-A70Z 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A710         TCGA-FG-A711         TCGA-FG-A713 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A87N         TCGA-FG-A87Q         TCGA-FN-7833 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7467         TCGA-HT-7468         TCGA-HT-7469 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7470         TCGA-HT-7471         TCGA-HT-7472 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7473         TCGA-HT-7474         TCGA-HT-7475 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7476         TCGA-HT-7477         TCGA-HT-7478 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7479         TCGA-HT-7480         TCGA-HT-7481 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7482         TCGA-HT-7483         TCGA-HT-7485 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7601         TCGA-HT-7602         TCGA-HT-7603 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7604         TCGA-HT-7605         TCGA-HT-7606 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7607         TCGA-HT-7608         TCGA-HT-7609 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7610         TCGA-HT-7611         TCGA-HT-7616 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7620         TCGA-HT-7676         TCGA-HT-7677 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7680         TCGA-HT-7681         TCGA-HT-7684 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7686         TCGA-HT-7687         TCGA-HT-7688 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7689         TCGA-HT-7690         TCGA-HT-7691 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7692         TCGA-HT-7693         TCGA-HT-7694 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7695         TCGA-HT-7854         TCGA-HT-7855 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7856         TCGA-HT-7857         TCGA-HT-7858 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7860         TCGA-HT-7873         TCGA-HT-7874 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7875         TCGA-HT-7877         TCGA-HT-7879 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7880         TCGA-HT-7881         TCGA-HT-7882 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7884         TCGA-HT-7902         TCGA-HT-8010 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8012         TCGA-HT-8013         TCGA-HT-8015 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8018         TCGA-HT-8019         TCGA-HT-8104 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8105         TCGA-HT-8106         TCGA-HT-8107 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8108         TCGA-HT-8109         TCGA-HT-8110 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8111         TCGA-HT-8113         TCGA-HT-8114 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8558         TCGA-HT-8563         TCGA-HT-8564 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A4DS         TCGA-HT-A4DV         TCGA-HT-A5R5 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A5R7         TCGA-HT-A5R9         TCGA-HT-A5RA 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A5RB         TCGA-HT-A5RC         TCGA-HT-A614 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A615         TCGA-HT-A616         TCGA-HT-A617 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A618         TCGA-HT-A619         TCGA-HT-A61A 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A61B         TCGA-HT-A61C         TCGA-HT-A74H 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A74K         TCGA-HT-A74L         TCGA-HT-A74O 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-7486         TCGA-HW-7487         TCGA-HW-7489 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-7490         TCGA-HW-7491         TCGA-HW-7495 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-8319         TCGA-HW-8320         TCGA-HW-8321 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-8322         TCGA-HW-A5KJ         TCGA-HW-A5KK 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-A5KL         TCGA-HW-A5KM         TCGA-IK-7675 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-IK-8125         TCGA-KT-A74X         TCGA-KT-A7W1 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5ET         TCGA-P5-A5EU         TCGA-P5-A5EV 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5EW         TCGA-P5-A5EX         TCGA-P5-A5EY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5EZ         TCGA-P5-A5F0         TCGA-P5-A5F1 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5F2         TCGA-P5-A5F4         TCGA-P5-A5F6 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A72U         TCGA-P5-A72W         TCGA-P5-A72X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A72Z         TCGA-P5-A730         TCGA-P5-A731 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A733         TCGA-P5-A735         TCGA-P5-A736 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A737         TCGA-P5-A77W         TCGA-P5-A77X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A780         TCGA-P5-A781         TCGA-QH-A65R 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A65S         TCGA-QH-A65V         TCGA-QH-A65X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A65Z         TCGA-QH-A6CS         TCGA-QH-A6CU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6CV         TCGA-QH-A6CX         TCGA-QH-A6CY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6CZ         TCGA-QH-A6X3         TCGA-QH-A6X4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6X5         TCGA-QH-A6X8         TCGA-QH-A6X9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6XA         TCGA-QH-A6XC         TCGA-QH-A86X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A870         TCGA-R8-A6MK         TCGA-R8-A6ML 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-R8-A6MO         TCGA-R8-A6YH         TCGA-R8-A73M 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A83X         TCGA-RY-A83Y         TCGA-RY-A83Z 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A840         TCGA-RY-A843         TCGA-RY-A845 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A847         TCGA-S9-A6TS         TCGA-S9-A6TU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6TV         TCGA-S9-A6TW         TCGA-S9-A6TX 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6TY         TCGA-S9-A6TZ         TCGA-S9-A6U0 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6U1         TCGA-S9-A6U2         TCGA-S9-A6U5 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6U6         TCGA-S9-A6U8         TCGA-S9-A6U9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6UA         TCGA-S9-A6UB         TCGA-S9-A6WD 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WE         TCGA-S9-A6WG         TCGA-S9-A6WH 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WI         TCGA-S9-A6WL         TCGA-S9-A6WM 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WN         TCGA-S9-A6WO         TCGA-S9-A6WP 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WQ         TCGA-S9-A7IQ         TCGA-S9-A7IS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7IX         TCGA-S9-A7IY         TCGA-S9-A7IZ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7J0         TCGA-S9-A7J1         TCGA-S9-A7J2 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7J3         TCGA-S9-A7QW         TCGA-S9-A7QX 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7QY         TCGA-S9-A7QZ         TCGA-S9-A7R1 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7R2         TCGA-S9-A7R3         TCGA-S9-A7R4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7R7         TCGA-S9-A7R8         TCGA-S9-A89V 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A89Z         TCGA-TM-A7C3         TCGA-TM-A7C4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A7C5         TCGA-TM-A7CA         TCGA-TM-A7CF 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84B         TCGA-TM-A84C         TCGA-TM-A84F 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84G         TCGA-TM-A84H         TCGA-TM-A84I 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84J         TCGA-TM-A84L         TCGA-TM-A84M 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84O         TCGA-TM-A84Q         TCGA-TM-A84R 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84S         TCGA-TM-A84T         TCGA-TQ-A7RF 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RG         TCGA-TQ-A7RH         TCGA-TQ-A7RI 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RJ         TCGA-TQ-A7RK         TCGA-TQ-A7RM 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RN         TCGA-TQ-A7RO         TCGA-TQ-A7RP 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RQ         TCGA-TQ-A7RR         TCGA-TQ-A7RS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RU         TCGA-TQ-A7RV         TCGA-TQ-A7RW 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A8XE         TCGA-VM-A8C8         TCGA-VM-A8C9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VM-A8CA         TCGA-VM-A8CB         TCGA-VM-A8CD 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VM-A8CE         TCGA-VM-A8CF         TCGA-VM-A8CH 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VV-A829         TCGA-VV-A86M         TCGA-VW-A7QS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VW-A8FI         TCGA-W9-A837         TCGA-WH-A86K 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A858         TCGA-WY-A859         TCGA-WY-A85A 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A85B         TCGA-WY-A85C         TCGA-WY-A85D 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A85E 
"TMEM229B WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM229B MUTATED        0      0      1
  TMEM229B WILD-TYPE    222    184    102
D76V10, multiclass
[1] "Remove cluster labels:" "TMEM229B MUTATED"      
clus
  TMEM229B MUTATED TMEM229B WILD-TYPE 
                 1                508 
        TCGA-CS-4938         TCGA-CS-4941         TCGA-CS-4942 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-4943         TCGA-CS-4944         TCGA-CS-5390 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-5393         TCGA-CS-5394         TCGA-CS-5395 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-5396         TCGA-CS-5397         TCGA-CS-6186 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6188         TCGA-CS-6290         TCGA-CS-6665 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6666         TCGA-CS-6667         TCGA-CS-6668 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6669         TCGA-CS-6670         TCGA-DB-5270 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5273         TCGA-DB-5274         TCGA-DB-5275 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5276         TCGA-DB-5277         TCGA-DB-5278 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5279         TCGA-DB-5280         TCGA-DB-5281 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4X9         TCGA-DB-A4XA         TCGA-DB-A4XB 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4XC         TCGA-DB-A4XD         TCGA-DB-A4XE 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4XF         TCGA-DB-A4XG         TCGA-DB-A4XH 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64L         TCGA-DB-A64O         TCGA-DB-A64P 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64Q         TCGA-DB-A64R         TCGA-DB-A64S 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64U         TCGA-DB-A64V         TCGA-DB-A64W 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64X         TCGA-DB-A75K         TCGA-DB-A75L 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A75O         TCGA-DB-A75P         TCGA-DH-5140 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-5141         TCGA-DH-5142         TCGA-DH-5143 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-5144         TCGA-DH-A669         TCGA-DH-A66B 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A66D         TCGA-DH-A66F         TCGA-DH-A66G 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A7UR         TCGA-DH-A7US         TCGA-DH-A7UT 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A7UU         TCGA-DH-A7UV         TCGA-DU-5847 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5849         TCGA-DU-5851         TCGA-DU-5852 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5853         TCGA-DU-5854         TCGA-DU-5855 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5870         TCGA-DU-5871         TCGA-DU-5872 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5874         TCGA-DU-6392         TCGA-DU-6393 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6394         TCGA-DU-6395         TCGA-DU-6396 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6397         TCGA-DU-6399         TCGA-DU-6400 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6401         TCGA-DU-6402         TCGA-DU-6403 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6404         TCGA-DU-6405         TCGA-DU-6406 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6407         TCGA-DU-6408         TCGA-DU-6410 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6542         TCGA-DU-7006         TCGA-DU-7007 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7008         TCGA-DU-7009         TCGA-DU-7010 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7012         TCGA-DU-7013         TCGA-DU-7015 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7018         TCGA-DU-7019         TCGA-DU-7290 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7292         TCGA-DU-7294         TCGA-DU-7298 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7299         TCGA-DU-7300         TCGA-DU-7301 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7302         TCGA-DU-7304         TCGA-DU-7306 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7309         TCGA-DU-8158         TCGA-DU-8161 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8162         TCGA-DU-8163         TCGA-DU-8164 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8165         TCGA-DU-8166         TCGA-DU-8167 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8168         TCGA-DU-A5TP         TCGA-DU-A5TR 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A5TS         TCGA-DU-A5TT         TCGA-DU-A5TU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A5TW         TCGA-DU-A5TY         TCGA-DU-A6S2 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A6S3         TCGA-DU-A6S6         TCGA-DU-A6S7 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A6S8         TCGA-DU-A76K         TCGA-DU-A76L 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A76O         TCGA-DU-A76R         TCGA-DU-A7T6 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A7T8         TCGA-DU-A7TA         TCGA-DU-A7TB 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A7TC         TCGA-DU-A7TD         TCGA-DU-A7TG 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A7TJ         TCGA-E1-5302         TCGA-E1-5303 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5304         TCGA-E1-5305         TCGA-E1-5307 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5311         TCGA-E1-5318         TCGA-E1-5319 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5322         TCGA-E1-A7YD         TCGA-E1-A7YE 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YH         TCGA-E1-A7YI         TCGA-E1-A7YJ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YK         TCGA-E1-A7YL         TCGA-E1-A7YM 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YN         TCGA-E1-A7YO         TCGA-E1-A7YQ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YS         TCGA-E1-A7YU         TCGA-E1-A7YV 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YW         TCGA-E1-A7YY         TCGA-E1-A7Z2 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7Z3         TCGA-E1-A7Z4         TCGA-E1-A7Z6 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-EZ-7264         TCGA-F6-A8O3         TCGA-F6-A8O4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-5962         TCGA-FG-5963         TCGA-FG-5964 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-5965         TCGA-FG-6688         TCGA-FG-6689 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-6690         TCGA-FG-6691         TCGA-FG-6692 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-7634         TCGA-FG-7636         TCGA-FG-7637 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-7638         TCGA-FG-7641         TCGA-FG-7643 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8181         TCGA-FG-8182         TCGA-FG-8185 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8186         TCGA-FG-8187         TCGA-FG-8188 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8189         TCGA-FG-8191         TCGA-FG-A4MT 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A4MU         TCGA-FG-A4MW         TCGA-FG-A4MX 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A4MY         TCGA-FG-A60J         TCGA-FG-A60K 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A60L         TCGA-FG-A6IZ         TCGA-FG-A6J1 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A6J3         TCGA-FG-A70Y         TCGA-FG-A70Z 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A710         TCGA-FG-A711         TCGA-FG-A713 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A87N         TCGA-FG-A87Q         TCGA-FN-7833 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7467         TCGA-HT-7468         TCGA-HT-7469 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7470         TCGA-HT-7471         TCGA-HT-7472 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7473         TCGA-HT-7474         TCGA-HT-7475 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7476         TCGA-HT-7477         TCGA-HT-7478 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7479         TCGA-HT-7480         TCGA-HT-7481 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7482         TCGA-HT-7483         TCGA-HT-7485 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7601         TCGA-HT-7602         TCGA-HT-7603 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7604         TCGA-HT-7605         TCGA-HT-7606 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7607         TCGA-HT-7608         TCGA-HT-7609 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7610         TCGA-HT-7611         TCGA-HT-7616 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7620         TCGA-HT-7676         TCGA-HT-7677 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7680         TCGA-HT-7681         TCGA-HT-7684 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7686         TCGA-HT-7687         TCGA-HT-7688 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7689         TCGA-HT-7690         TCGA-HT-7691 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7692         TCGA-HT-7693         TCGA-HT-7694 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7695         TCGA-HT-7854         TCGA-HT-7855 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7856         TCGA-HT-7857         TCGA-HT-7858 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7860         TCGA-HT-7873         TCGA-HT-7874 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7875         TCGA-HT-7877         TCGA-HT-7879 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7880         TCGA-HT-7881         TCGA-HT-7882 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7884         TCGA-HT-7902         TCGA-HT-8010 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8012         TCGA-HT-8013         TCGA-HT-8015 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8018         TCGA-HT-8019         TCGA-HT-8104 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8105         TCGA-HT-8106         TCGA-HT-8107 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8108         TCGA-HT-8109         TCGA-HT-8110 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8111         TCGA-HT-8113         TCGA-HT-8114 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8558         TCGA-HT-8563         TCGA-HT-8564 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A4DS         TCGA-HT-A4DV         TCGA-HT-A5R5 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A5R7         TCGA-HT-A5R9         TCGA-HT-A5RA 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A5RB         TCGA-HT-A5RC         TCGA-HT-A614 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A615         TCGA-HT-A616         TCGA-HT-A617 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A618         TCGA-HT-A619         TCGA-HT-A61A 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A61B         TCGA-HT-A61C         TCGA-HT-A74H 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A74K         TCGA-HT-A74L         TCGA-HT-A74O 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-7486         TCGA-HW-7487         TCGA-HW-7489 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-7490         TCGA-HW-7491         TCGA-HW-7495 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-8319         TCGA-HW-8320         TCGA-HW-8321 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-8322         TCGA-HW-A5KJ         TCGA-HW-A5KK 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-A5KL         TCGA-HW-A5KM         TCGA-IK-7675 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-IK-8125         TCGA-KT-A74X         TCGA-KT-A7W1 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5ET         TCGA-P5-A5EU         TCGA-P5-A5EV 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5EW         TCGA-P5-A5EX         TCGA-P5-A5EY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5EZ         TCGA-P5-A5F0         TCGA-P5-A5F1 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5F2         TCGA-P5-A5F4         TCGA-P5-A5F6 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A72U         TCGA-P5-A72W         TCGA-P5-A72X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A72Z         TCGA-P5-A730         TCGA-P5-A731 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A733         TCGA-P5-A735         TCGA-P5-A736 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A737         TCGA-P5-A77W         TCGA-P5-A77X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A780         TCGA-P5-A781         TCGA-QH-A65R 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A65S         TCGA-QH-A65V         TCGA-QH-A65X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A65Z         TCGA-QH-A6CS         TCGA-QH-A6CU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6CV         TCGA-QH-A6CX         TCGA-QH-A6CY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6CZ         TCGA-QH-A6X3         TCGA-QH-A6X4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6X5         TCGA-QH-A6X8         TCGA-QH-A6X9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6XA         TCGA-QH-A6XC         TCGA-QH-A86X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A870         TCGA-R8-A6MK         TCGA-R8-A6ML 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-R8-A6MO         TCGA-R8-A6YH         TCGA-R8-A73M 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A83X         TCGA-RY-A83Y         TCGA-RY-A83Z 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A840         TCGA-RY-A843         TCGA-RY-A845 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A847         TCGA-S9-A6TS         TCGA-S9-A6TU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6TV         TCGA-S9-A6TW         TCGA-S9-A6TX 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6TY         TCGA-S9-A6TZ         TCGA-S9-A6U0 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6U1         TCGA-S9-A6U2         TCGA-S9-A6U5 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6U6         TCGA-S9-A6U8         TCGA-S9-A6U9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6UA         TCGA-S9-A6UB         TCGA-S9-A6WD 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WE         TCGA-S9-A6WG         TCGA-S9-A6WH 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WI         TCGA-S9-A6WL         TCGA-S9-A6WM 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WN         TCGA-S9-A6WO         TCGA-S9-A6WP 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WQ         TCGA-S9-A7IQ         TCGA-S9-A7IS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7IX         TCGA-S9-A7IY         TCGA-S9-A7IZ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7J0         TCGA-S9-A7J1         TCGA-S9-A7J2 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7J3         TCGA-S9-A7QW         TCGA-S9-A7QX 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7QY         TCGA-S9-A7QZ         TCGA-S9-A7R1 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7R2         TCGA-S9-A7R3         TCGA-S9-A7R4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7R7         TCGA-S9-A7R8         TCGA-S9-A89V 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A89Z         TCGA-TM-A7C3         TCGA-TM-A7C4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A7C5         TCGA-TM-A7CA         TCGA-TM-A7CF 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84B         TCGA-TM-A84C         TCGA-TM-A84F 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84G         TCGA-TM-A84H         TCGA-TM-A84I 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84J         TCGA-TM-A84L         TCGA-TM-A84M 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84O         TCGA-TM-A84Q         TCGA-TM-A84R 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84S         TCGA-TM-A84T         TCGA-TQ-A7RF 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RG         TCGA-TQ-A7RH         TCGA-TQ-A7RI 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RJ         TCGA-TQ-A7RK         TCGA-TQ-A7RM 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RN         TCGA-TQ-A7RO         TCGA-TQ-A7RP 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RQ         TCGA-TQ-A7RR         TCGA-TQ-A7RS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RU         TCGA-TQ-A7RV         TCGA-TQ-A7RW 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A8XE         TCGA-VM-A8C8         TCGA-VM-A8C9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VM-A8CA         TCGA-VM-A8CB         TCGA-VM-A8CD 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VM-A8CE         TCGA-VM-A8CF         TCGA-VM-A8CH 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VV-A829         TCGA-VV-A86M         TCGA-VW-A7QS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VW-A8FI         TCGA-W9-A837         TCGA-WH-A86K 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A858         TCGA-WY-A859         TCGA-WY-A85A 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A85B         TCGA-WY-A85C         TCGA-WY-A85D 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A85E 
"TMEM229B WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM229B MUTATED        1      0      0
  TMEM229B WILD-TYPE    183    162    159
D76V11, multiclass
[1] "Remove cluster labels:" "TMEM229B MUTATED"      
clus
  TMEM229B MUTATED TMEM229B WILD-TYPE 
                 1                504 
        TCGA-CS-4938         TCGA-CS-4941         TCGA-CS-4942 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-4943         TCGA-CS-4944         TCGA-CS-5390 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-5393         TCGA-CS-5394         TCGA-CS-5395 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-5396         TCGA-CS-5397         TCGA-CS-6186 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6188         TCGA-CS-6290         TCGA-CS-6665 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6666         TCGA-CS-6667         TCGA-CS-6668 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6669         TCGA-CS-6670         TCGA-DB-5270 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5273         TCGA-DB-5274         TCGA-DB-5275 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5276         TCGA-DB-5277         TCGA-DB-5278 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5279         TCGA-DB-5281         TCGA-DB-A4X9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4XA         TCGA-DB-A4XB         TCGA-DB-A4XC 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4XD         TCGA-DB-A4XE         TCGA-DB-A4XF 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4XG         TCGA-DB-A4XH         TCGA-DB-A64L 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64O         TCGA-DB-A64P         TCGA-DB-A64Q 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64R         TCGA-DB-A64S         TCGA-DB-A64U 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64V         TCGA-DB-A64W         TCGA-DB-A64X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A75K         TCGA-DB-A75L         TCGA-DB-A75O 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A75P         TCGA-DH-5140         TCGA-DH-5141 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-5142         TCGA-DH-5143         TCGA-DH-5144 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A669         TCGA-DH-A66B         TCGA-DH-A66D 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A66F         TCGA-DH-A66G         TCGA-DH-A7UR 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A7US         TCGA-DH-A7UT         TCGA-DH-A7UU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A7UV         TCGA-DU-5847         TCGA-DU-5849 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5851         TCGA-DU-5852         TCGA-DU-5853 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5854         TCGA-DU-5855         TCGA-DU-5870 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5871         TCGA-DU-5872         TCGA-DU-5874 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6392         TCGA-DU-6393         TCGA-DU-6394 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6395         TCGA-DU-6396         TCGA-DU-6397 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6399         TCGA-DU-6400         TCGA-DU-6401 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6402         TCGA-DU-6403         TCGA-DU-6404 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6405         TCGA-DU-6406         TCGA-DU-6407 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6408         TCGA-DU-6410         TCGA-DU-6542 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7006         TCGA-DU-7007         TCGA-DU-7008 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7009         TCGA-DU-7010         TCGA-DU-7012 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7013         TCGA-DU-7015         TCGA-DU-7018 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7019         TCGA-DU-7290         TCGA-DU-7292 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7294         TCGA-DU-7298         TCGA-DU-7299 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7300         TCGA-DU-7301         TCGA-DU-7302 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7304         TCGA-DU-7306         TCGA-DU-7309 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8158         TCGA-DU-8161         TCGA-DU-8162 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8163         TCGA-DU-8164         TCGA-DU-8165 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8166         TCGA-DU-8167         TCGA-DU-8168 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A5TP         TCGA-DU-A5TR         TCGA-DU-A5TS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A5TT         TCGA-DU-A5TU         TCGA-DU-A5TW 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A5TY         TCGA-DU-A6S2         TCGA-DU-A6S3 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A6S6         TCGA-DU-A6S7         TCGA-DU-A6S8 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A76K         TCGA-DU-A76L         TCGA-DU-A76O 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A76R         TCGA-DU-A7T6         TCGA-DU-A7T8 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A7TA         TCGA-DU-A7TB         TCGA-DU-A7TC 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A7TD         TCGA-DU-A7TG         TCGA-DU-A7TJ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5302         TCGA-E1-5303         TCGA-E1-5304 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5305         TCGA-E1-5307         TCGA-E1-5311 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5318         TCGA-E1-5319         TCGA-E1-5322 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YD         TCGA-E1-A7YE         TCGA-E1-A7YH 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YI         TCGA-E1-A7YJ         TCGA-E1-A7YK 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YL         TCGA-E1-A7YM         TCGA-E1-A7YN 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YO         TCGA-E1-A7YQ         TCGA-E1-A7YS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YU         TCGA-E1-A7YV         TCGA-E1-A7YW 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YY         TCGA-E1-A7Z2         TCGA-E1-A7Z3 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7Z4         TCGA-E1-A7Z6         TCGA-EZ-7264 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-F6-A8O3         TCGA-F6-A8O4         TCGA-FG-5962 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-5963         TCGA-FG-5964         TCGA-FG-5965 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-6688         TCGA-FG-6689         TCGA-FG-6690 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-6691         TCGA-FG-6692         TCGA-FG-7634 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-7636         TCGA-FG-7637         TCGA-FG-7638 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-7641         TCGA-FG-7643         TCGA-FG-8181 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8182         TCGA-FG-8185         TCGA-FG-8186 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8187         TCGA-FG-8188         TCGA-FG-8189 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8191         TCGA-FG-A4MT         TCGA-FG-A4MU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A4MW         TCGA-FG-A4MX         TCGA-FG-A4MY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A60J         TCGA-FG-A60K         TCGA-FG-A60L 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A6IZ         TCGA-FG-A6J1         TCGA-FG-A6J3 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A70Y         TCGA-FG-A70Z         TCGA-FG-A710 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A711         TCGA-FG-A713         TCGA-FG-A87N 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A87Q         TCGA-FN-7833         TCGA-HT-7467 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7468         TCGA-HT-7469         TCGA-HT-7470 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7471         TCGA-HT-7472         TCGA-HT-7473 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7474         TCGA-HT-7475         TCGA-HT-7476 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7477         TCGA-HT-7478         TCGA-HT-7479 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7480         TCGA-HT-7481         TCGA-HT-7482 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7483         TCGA-HT-7485         TCGA-HT-7601 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7602         TCGA-HT-7603         TCGA-HT-7604 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7605         TCGA-HT-7606         TCGA-HT-7607 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7608         TCGA-HT-7609         TCGA-HT-7610 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7611         TCGA-HT-7616         TCGA-HT-7620 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7676         TCGA-HT-7677         TCGA-HT-7680 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7681         TCGA-HT-7684         TCGA-HT-7686 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7687         TCGA-HT-7688         TCGA-HT-7689 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7690         TCGA-HT-7691         TCGA-HT-7692 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7693         TCGA-HT-7694         TCGA-HT-7695 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7854         TCGA-HT-7855         TCGA-HT-7856 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7857         TCGA-HT-7858         TCGA-HT-7860 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7873         TCGA-HT-7874         TCGA-HT-7875 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7877         TCGA-HT-7879         TCGA-HT-7880 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7881         TCGA-HT-7882         TCGA-HT-7884 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7902         TCGA-HT-8010         TCGA-HT-8012 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8013         TCGA-HT-8015         TCGA-HT-8018 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8019         TCGA-HT-8104         TCGA-HT-8105 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8106         TCGA-HT-8107         TCGA-HT-8108 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8109         TCGA-HT-8110         TCGA-HT-8111 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8113         TCGA-HT-8114         TCGA-HT-8558 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8563         TCGA-HT-8564         TCGA-HT-A4DS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A4DV         TCGA-HT-A5R5         TCGA-HT-A5R7 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A5R9         TCGA-HT-A5RA         TCGA-HT-A5RB 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A5RC         TCGA-HT-A614         TCGA-HT-A615 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A616         TCGA-HT-A617         TCGA-HT-A618 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A619         TCGA-HT-A61A         TCGA-HT-A61B 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A61C         TCGA-HT-A74H         TCGA-HT-A74K 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A74L         TCGA-HT-A74O         TCGA-HW-7486 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-7487         TCGA-HW-7489         TCGA-HW-7490 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-7491         TCGA-HW-7495         TCGA-HW-8319 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-8320         TCGA-HW-8321         TCGA-HW-8322 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-A5KJ         TCGA-HW-A5KK         TCGA-HW-A5KL 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-A5KM         TCGA-IK-7675         TCGA-IK-8125 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-KT-A74X         TCGA-KT-A7W1         TCGA-P5-A5ET 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5EU         TCGA-P5-A5EV         TCGA-P5-A5EW 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5EX         TCGA-P5-A5EY         TCGA-P5-A5EZ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5F0         TCGA-P5-A5F1         TCGA-P5-A5F2 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5F4         TCGA-P5-A72U         TCGA-P5-A72W 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A72X         TCGA-P5-A72Z         TCGA-P5-A730 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A731         TCGA-P5-A733         TCGA-P5-A735 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A737         TCGA-P5-A77W         TCGA-P5-A77X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A780         TCGA-P5-A781         TCGA-QH-A65R 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A65S         TCGA-QH-A65V         TCGA-QH-A65X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A65Z         TCGA-QH-A6CS         TCGA-QH-A6CU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6CV         TCGA-QH-A6CX         TCGA-QH-A6CY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6CZ         TCGA-QH-A6X3         TCGA-QH-A6X4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6X5         TCGA-QH-A6X8         TCGA-QH-A6X9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6XA         TCGA-QH-A6XC         TCGA-QH-A86X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A870         TCGA-R8-A6MK         TCGA-R8-A6ML 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-R8-A6MO         TCGA-R8-A6YH         TCGA-R8-A73M 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A83X         TCGA-RY-A83Y         TCGA-RY-A83Z 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A840         TCGA-RY-A843         TCGA-RY-A845 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A847         TCGA-S9-A6TS         TCGA-S9-A6TU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6TV         TCGA-S9-A6TW         TCGA-S9-A6TX 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6TY         TCGA-S9-A6TZ         TCGA-S9-A6U0 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6U1         TCGA-S9-A6U2         TCGA-S9-A6U5 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6U6         TCGA-S9-A6U8         TCGA-S9-A6UA 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6UB         TCGA-S9-A6WD         TCGA-S9-A6WE 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WG         TCGA-S9-A6WH         TCGA-S9-A6WI 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WL         TCGA-S9-A6WM         TCGA-S9-A6WN 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WO         TCGA-S9-A6WP         TCGA-S9-A6WQ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7IQ         TCGA-S9-A7IS         TCGA-S9-A7IX 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7IY         TCGA-S9-A7IZ         TCGA-S9-A7J0 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7J1         TCGA-S9-A7J2         TCGA-S9-A7J3 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7QW         TCGA-S9-A7QX         TCGA-S9-A7QY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7QZ         TCGA-S9-A7R1         TCGA-S9-A7R2 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7R3         TCGA-S9-A7R4         TCGA-S9-A7R7 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7R8         TCGA-S9-A89V         TCGA-S9-A89Z 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A7C3         TCGA-TM-A7C4         TCGA-TM-A7C5 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A7CA         TCGA-TM-A7CF         TCGA-TM-A84B 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84C         TCGA-TM-A84F         TCGA-TM-A84G 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84H         TCGA-TM-A84I         TCGA-TM-A84J 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84L         TCGA-TM-A84M         TCGA-TM-A84O 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84Q         TCGA-TM-A84R         TCGA-TM-A84S 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84T         TCGA-TQ-A7RF         TCGA-TQ-A7RG 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RH         TCGA-TQ-A7RI         TCGA-TQ-A7RJ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RK         TCGA-TQ-A7RM         TCGA-TQ-A7RN 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RO         TCGA-TQ-A7RP         TCGA-TQ-A7RQ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RR         TCGA-TQ-A7RS         TCGA-TQ-A7RU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RV         TCGA-TQ-A7RW         TCGA-TQ-A8XE 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VM-A8C8         TCGA-VM-A8C9         TCGA-VM-A8CA 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VM-A8CB         TCGA-VM-A8CD         TCGA-VM-A8CE 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VM-A8CF         TCGA-VM-A8CH         TCGA-VV-A829 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VV-A86M         TCGA-VW-A7QS         TCGA-VW-A8FI 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-W9-A837         TCGA-WH-A86K         TCGA-WY-A858 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A859         TCGA-WY-A85A         TCGA-WY-A85B 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A85C         TCGA-WY-A85D         TCGA-WY-A85E 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM229B MUTATED        0      0      0      1
  TMEM229B WILD-TYPE     90    138    188     88
D76V12, multiclass
[1] "Remove cluster labels:" "TMEM229B MUTATED"      
clus
  TMEM229B MUTATED TMEM229B WILD-TYPE 
                 1                504 
        TCGA-CS-4938         TCGA-CS-4941         TCGA-CS-4942 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-4943         TCGA-CS-4944         TCGA-CS-5390 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-5393         TCGA-CS-5394         TCGA-CS-5395 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-5396         TCGA-CS-5397         TCGA-CS-6186 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6188         TCGA-CS-6290         TCGA-CS-6665 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6666         TCGA-CS-6667         TCGA-CS-6668 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-CS-6669         TCGA-CS-6670         TCGA-DB-5270 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5273         TCGA-DB-5274         TCGA-DB-5275 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5276         TCGA-DB-5277         TCGA-DB-5278 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-5279         TCGA-DB-5281         TCGA-DB-A4X9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4XA         TCGA-DB-A4XB         TCGA-DB-A4XC 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4XD         TCGA-DB-A4XE         TCGA-DB-A4XF 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A4XG         TCGA-DB-A4XH         TCGA-DB-A64L 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64O         TCGA-DB-A64P         TCGA-DB-A64Q 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64R         TCGA-DB-A64S         TCGA-DB-A64U 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A64V         TCGA-DB-A64W         TCGA-DB-A64X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A75K         TCGA-DB-A75L         TCGA-DB-A75O 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DB-A75P         TCGA-DH-5140         TCGA-DH-5141 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-5142         TCGA-DH-5143         TCGA-DH-5144 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A669         TCGA-DH-A66B         TCGA-DH-A66D 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A66F         TCGA-DH-A66G         TCGA-DH-A7UR 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A7US         TCGA-DH-A7UT         TCGA-DH-A7UU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DH-A7UV         TCGA-DU-5847         TCGA-DU-5849 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5851         TCGA-DU-5852         TCGA-DU-5853 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5854         TCGA-DU-5855         TCGA-DU-5870 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-5871         TCGA-DU-5872         TCGA-DU-5874 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6392         TCGA-DU-6393         TCGA-DU-6394 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6395         TCGA-DU-6396         TCGA-DU-6397 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6399         TCGA-DU-6400         TCGA-DU-6401 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6402         TCGA-DU-6403         TCGA-DU-6404 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6405         TCGA-DU-6406         TCGA-DU-6407 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-6408         TCGA-DU-6410         TCGA-DU-6542 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7006         TCGA-DU-7007         TCGA-DU-7008 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7009         TCGA-DU-7010         TCGA-DU-7012 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7013         TCGA-DU-7015         TCGA-DU-7018 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7019         TCGA-DU-7290         TCGA-DU-7292 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7294         TCGA-DU-7298         TCGA-DU-7299 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7300         TCGA-DU-7301         TCGA-DU-7302 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-7304         TCGA-DU-7306         TCGA-DU-7309 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8158         TCGA-DU-8161         TCGA-DU-8162 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8163         TCGA-DU-8164         TCGA-DU-8165 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-8166         TCGA-DU-8167         TCGA-DU-8168 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A5TP         TCGA-DU-A5TR         TCGA-DU-A5TS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A5TT         TCGA-DU-A5TU         TCGA-DU-A5TW 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A5TY         TCGA-DU-A6S2         TCGA-DU-A6S3 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A6S6         TCGA-DU-A6S7         TCGA-DU-A6S8 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A76K         TCGA-DU-A76L         TCGA-DU-A76O 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A76R         TCGA-DU-A7T6         TCGA-DU-A7T8 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A7TA         TCGA-DU-A7TB         TCGA-DU-A7TC 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-DU-A7TD         TCGA-DU-A7TG         TCGA-DU-A7TJ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5302         TCGA-E1-5303         TCGA-E1-5304 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5305         TCGA-E1-5307         TCGA-E1-5311 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-5318         TCGA-E1-5319         TCGA-E1-5322 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YD         TCGA-E1-A7YE         TCGA-E1-A7YH 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YI         TCGA-E1-A7YJ         TCGA-E1-A7YK 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YL         TCGA-E1-A7YM         TCGA-E1-A7YN 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YO         TCGA-E1-A7YQ         TCGA-E1-A7YS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YU         TCGA-E1-A7YV         TCGA-E1-A7YW 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7YY         TCGA-E1-A7Z2         TCGA-E1-A7Z3 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-E1-A7Z4         TCGA-E1-A7Z6         TCGA-EZ-7264 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-F6-A8O3         TCGA-F6-A8O4         TCGA-FG-5962 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-5963         TCGA-FG-5964         TCGA-FG-5965 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-6688         TCGA-FG-6689         TCGA-FG-6690 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-6691         TCGA-FG-6692         TCGA-FG-7634 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-7636         TCGA-FG-7637         TCGA-FG-7638 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-7641         TCGA-FG-7643         TCGA-FG-8181 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8182         TCGA-FG-8185         TCGA-FG-8186 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8187         TCGA-FG-8188         TCGA-FG-8189 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-8191         TCGA-FG-A4MT         TCGA-FG-A4MU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A4MW         TCGA-FG-A4MX         TCGA-FG-A4MY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A60J         TCGA-FG-A60K         TCGA-FG-A60L 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A6IZ         TCGA-FG-A6J1         TCGA-FG-A6J3 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A70Y         TCGA-FG-A70Z         TCGA-FG-A710 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A711         TCGA-FG-A713         TCGA-FG-A87N 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-FG-A87Q         TCGA-FN-7833         TCGA-HT-7467 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7468         TCGA-HT-7469         TCGA-HT-7470 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7471         TCGA-HT-7472         TCGA-HT-7473 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7474         TCGA-HT-7475         TCGA-HT-7476 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7477         TCGA-HT-7478         TCGA-HT-7479 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7480         TCGA-HT-7481         TCGA-HT-7482 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7483         TCGA-HT-7485         TCGA-HT-7601 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7602         TCGA-HT-7603         TCGA-HT-7604 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7605         TCGA-HT-7606         TCGA-HT-7607 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7608         TCGA-HT-7609         TCGA-HT-7610 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7611         TCGA-HT-7616         TCGA-HT-7620 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7676         TCGA-HT-7677         TCGA-HT-7680 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7681         TCGA-HT-7684         TCGA-HT-7686 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7687         TCGA-HT-7688         TCGA-HT-7689 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7690         TCGA-HT-7691         TCGA-HT-7692 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7693         TCGA-HT-7694         TCGA-HT-7695 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7854         TCGA-HT-7855         TCGA-HT-7856 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7857         TCGA-HT-7858         TCGA-HT-7860 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7873         TCGA-HT-7874         TCGA-HT-7875 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7877         TCGA-HT-7879         TCGA-HT-7880 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7881         TCGA-HT-7882         TCGA-HT-7884 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-7902         TCGA-HT-8010         TCGA-HT-8012 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8013         TCGA-HT-8015         TCGA-HT-8018 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8019         TCGA-HT-8104         TCGA-HT-8105 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8106         TCGA-HT-8107         TCGA-HT-8108 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8109         TCGA-HT-8110         TCGA-HT-8111 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8113         TCGA-HT-8114         TCGA-HT-8558 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-8563         TCGA-HT-8564         TCGA-HT-A4DS 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A4DV         TCGA-HT-A5R5         TCGA-HT-A5R7 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A5R9         TCGA-HT-A5RA         TCGA-HT-A5RB 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A5RC         TCGA-HT-A614         TCGA-HT-A615 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A616         TCGA-HT-A617         TCGA-HT-A618 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A619         TCGA-HT-A61A         TCGA-HT-A61B 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A61C         TCGA-HT-A74H         TCGA-HT-A74K 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HT-A74L         TCGA-HT-A74O         TCGA-HW-7486 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-7487         TCGA-HW-7489         TCGA-HW-7490 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-7491         TCGA-HW-7495         TCGA-HW-8319 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-8320         TCGA-HW-8321         TCGA-HW-8322 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-A5KJ         TCGA-HW-A5KK         TCGA-HW-A5KL 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-HW-A5KM         TCGA-IK-7675         TCGA-IK-8125 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-KT-A74X         TCGA-KT-A7W1         TCGA-P5-A5ET 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5EU         TCGA-P5-A5EV         TCGA-P5-A5EW 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5EX         TCGA-P5-A5EY         TCGA-P5-A5EZ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5F0         TCGA-P5-A5F1         TCGA-P5-A5F2 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A5F4         TCGA-P5-A72U         TCGA-P5-A72W 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A72X         TCGA-P5-A72Z         TCGA-P5-A730 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A731         TCGA-P5-A733         TCGA-P5-A735 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A737         TCGA-P5-A77W         TCGA-P5-A77X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-P5-A780         TCGA-P5-A781         TCGA-QH-A65R 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A65S         TCGA-QH-A65V         TCGA-QH-A65X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A65Z         TCGA-QH-A6CS         TCGA-QH-A6CU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6CV         TCGA-QH-A6CX         TCGA-QH-A6CY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6CZ         TCGA-QH-A6X3         TCGA-QH-A6X4 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6X5         TCGA-QH-A6X8         TCGA-QH-A6X9 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A6XA         TCGA-QH-A6XC         TCGA-QH-A86X 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-QH-A870         TCGA-R8-A6MK         TCGA-R8-A6ML 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-R8-A6MO         TCGA-R8-A6YH         TCGA-R8-A73M 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A83X         TCGA-RY-A83Y         TCGA-RY-A83Z 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A840         TCGA-RY-A843         TCGA-RY-A845 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-RY-A847         TCGA-S9-A6TS         TCGA-S9-A6TU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6TV         TCGA-S9-A6TW         TCGA-S9-A6TX 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6TY         TCGA-S9-A6TZ         TCGA-S9-A6U0 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6U1         TCGA-S9-A6U2         TCGA-S9-A6U5 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6U6         TCGA-S9-A6U8         TCGA-S9-A6UA 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6UB         TCGA-S9-A6WD         TCGA-S9-A6WE 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WG         TCGA-S9-A6WH         TCGA-S9-A6WI 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WL         TCGA-S9-A6WM         TCGA-S9-A6WN 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A6WO         TCGA-S9-A6WP         TCGA-S9-A6WQ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7IQ         TCGA-S9-A7IS         TCGA-S9-A7IX 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7IY         TCGA-S9-A7IZ         TCGA-S9-A7J0 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7J1         TCGA-S9-A7J2         TCGA-S9-A7J3 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7QW         TCGA-S9-A7QX         TCGA-S9-A7QY 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7QZ         TCGA-S9-A7R1         TCGA-S9-A7R2 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7R3         TCGA-S9-A7R4         TCGA-S9-A7R7 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-S9-A7R8         TCGA-S9-A89V         TCGA-S9-A89Z 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A7C3         TCGA-TM-A7C4         TCGA-TM-A7C5 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A7CA         TCGA-TM-A7CF         TCGA-TM-A84B 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84C         TCGA-TM-A84F         TCGA-TM-A84G 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84H         TCGA-TM-A84I         TCGA-TM-A84J 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84L         TCGA-TM-A84M         TCGA-TM-A84O 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84Q         TCGA-TM-A84R         TCGA-TM-A84S 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TM-A84T         TCGA-TQ-A7RF         TCGA-TQ-A7RG 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RH         TCGA-TQ-A7RI         TCGA-TQ-A7RJ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RK         TCGA-TQ-A7RM         TCGA-TQ-A7RN 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RO         TCGA-TQ-A7RP         TCGA-TQ-A7RQ 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RR         TCGA-TQ-A7RS         TCGA-TQ-A7RU 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-TQ-A7RV         TCGA-TQ-A7RW         TCGA-TQ-A8XE 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VM-A8C8         TCGA-VM-A8C9         TCGA-VM-A8CA 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VM-A8CB         TCGA-VM-A8CD         TCGA-VM-A8CE 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VM-A8CF         TCGA-VM-A8CH         TCGA-VV-A829 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-VV-A86M         TCGA-VW-A7QS         TCGA-VW-A8FI 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-W9-A837         TCGA-WH-A86K         TCGA-WY-A858 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A859         TCGA-WY-A85A         TCGA-WY-A85B 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 
        TCGA-WY-A85C         TCGA-WY-A85D         TCGA-WY-A85E 
"TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" "TMEM229B WILD-TYPE" 

Clustering(77) Variable = CD44 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD44 MUTATED        2      0      1      0
  CD44 WILD-TYPE     67     43     73     54
D77V1, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            2             67
  CLUS_2            0             43
  CLUS_3            1             73
  CLUS_4            0             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD44 MUTATED        2      0      1      0
  CD44 WILD-TYPE     61     50     47     79
D77V2, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            2             61
  CLUS_2            0             50
  CLUS_3            1             47
  CLUS_4            0             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD44 MUTATED        0      1      0      2
  CD44 WILD-TYPE     77     92     45     58
D77V3, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            0             77
  CLUS_2            1             92
  CLUS_3            0             45
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD44 MUTATED        1      1      1
  CD44 WILD-TYPE    137     60     75
D77V4, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            1            137
  CLUS_2            1             60
  CLUS_3            1             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD44 MUTATED        3      3      0
  CD44 WILD-TYPE    292    478      7
D77V5, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            3            292
  CLUS_2            3            478
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD44 MUTATED        1      1      0      1
  CD44 WILD-TYPE    159    231     64    165
D77V6, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            1            159
  CLUS_2            1            231
  CLUS_3            0             64
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD44 MUTATED        1      0      2
  CD44 WILD-TYPE    226    235    190
D77V7, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            1            226
  CLUS_2            0            235
  CLUS_3            2            190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD44 MUTATED        0      1      2
  CD44 WILD-TYPE    196    189    266
D77V8, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            1            189
  CLUS_3            2            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD44 MUTATED        0      1      2      0
  CD44 WILD-TYPE    136    106    181     83
D77V9, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            0            136
  CLUS_2            1            106
  CLUS_3            2            181
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD44 MUTATED        0      2      1
  CD44 WILD-TYPE    222    182    102
D77V10, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            0            222
  CLUS_2            2            182
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD44 MUTATED        0      1      2
  CD44 WILD-TYPE    184    161    157
D77V11, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            0            184
  CLUS_2            1            161
  CLUS_3            2            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD44 MUTATED        0      1      2      0
  CD44 WILD-TYPE     90    137    186     89
D77V12, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            1            137
  CLUS_3            2            186
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(78) Variable = BCLAF1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCLAF1 MUTATED        3      0      2      0
  BCLAF1 WILD-TYPE     66     43     72     54
D78V1, multiclass
        clus
vv       BCLAF1 MUTATED BCLAF1 WILD-TYPE
  CLUS_1              3               66
  CLUS_2              0               43
  CLUS_3              2               72
  CLUS_4              0               54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCLAF1 MUTATED        2      0      1      2
  BCLAF1 WILD-TYPE     61     50     47     77
D78V2, multiclass
        clus
vv       BCLAF1 MUTATED BCLAF1 WILD-TYPE
  CLUS_1              2               61
  CLUS_2              0               50
  CLUS_3              1               47
  CLUS_4              2               77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCLAF1 MUTATED        2      1      0      2
  BCLAF1 WILD-TYPE     75     92     45     58
D78V3, multiclass
        clus
vv       BCLAF1 MUTATED BCLAF1 WILD-TYPE
  CLUS_1              2               75
  CLUS_2              1               92
  CLUS_3              0               45
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCLAF1 MUTATED        4      1      0
  BCLAF1 WILD-TYPE    134     60     76
D78V4, multiclass
        clus
vv       BCLAF1 MUTATED BCLAF1 WILD-TYPE
  CLUS_1              4              134
  CLUS_2              1               60
  CLUS_3              0               76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCLAF1 MUTATED        6      6      0
  BCLAF1 WILD-TYPE    289    475      7
D78V5, multiclass
        clus
vv       BCLAF1 MUTATED BCLAF1 WILD-TYPE
  CLUS_1              6              289
  CLUS_2              6              475
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCLAF1 MUTATED        1      5      0      0
  BCLAF1 WILD-TYPE    159    227     64    166
D78V6, multiclass
        clus
vv       BCLAF1 MUTATED BCLAF1 WILD-TYPE
  CLUS_1              1              159
  CLUS_2              5              227
  CLUS_3              0               64
  CLUS_4              0              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCLAF1 MUTATED        4      5      0
  BCLAF1 WILD-TYPE    223    230    192
D78V7, multiclass
        clus
vv       BCLAF1 MUTATED BCLAF1 WILD-TYPE
  CLUS_1              4              223
  CLUS_2              5              230
  CLUS_3              0              192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCLAF1 MUTATED        3      6      0
  BCLAF1 WILD-TYPE    193    184    268
D78V8, multiclass
        clus
vv       BCLAF1 MUTATED BCLAF1 WILD-TYPE
  CLUS_1              3              193
  CLUS_2              6              184
  CLUS_3              0              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCLAF1 MUTATED        2      3      1      0
  BCLAF1 WILD-TYPE    134    104    182     83
D78V9, multiclass
        clus
vv       BCLAF1 MUTATED BCLAF1 WILD-TYPE
  CLUS_1              2              134
  CLUS_2              3              104
  CLUS_3              1              182
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCLAF1 MUTATED        3      1      2
  BCLAF1 WILD-TYPE    219    183    101
D78V10, multiclass
        clus
vv       BCLAF1 MUTATED BCLAF1 WILD-TYPE
  CLUS_1              3              219
  CLUS_2              1              183
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCLAF1 MUTATED        1      4      1
  BCLAF1 WILD-TYPE    183    158    158
D78V11, multiclass
        clus
vv       BCLAF1 MUTATED BCLAF1 WILD-TYPE
  CLUS_1              1              183
  CLUS_2              4              158
  CLUS_3              1              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCLAF1 MUTATED        2      2      2      0
  BCLAF1 WILD-TYPE     88    136    186     89
D78V12, multiclass
        clus
vv       BCLAF1 MUTATED BCLAF1 WILD-TYPE
  CLUS_1              2               88
  CLUS_2              2              136
  CLUS_3              2              186
  CLUS_4              0               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(79) Variable = POM121 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POM121 MUTATED        1      0      0      1
  POM121 WILD-TYPE     68     43     74     53
D79V1, multiclass
[1] "Remove cluster labels:" "POM121 MUTATED"        
clus
  POM121 MUTATED POM121 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0142       TCGA-06-0145       TCGA-06-0152 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0154       TCGA-06-0155       TCGA-06-0157       TCGA-06-0158 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4213       TCGA-32-4719 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POM121 MUTATED        1      0      0      1
  POM121 WILD-TYPE     62     50     48     78
D79V2, multiclass
[1] "Remove cluster labels:" "POM121 MUTATED"        
clus
  POM121 MUTATED POM121 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0142       TCGA-06-0145       TCGA-06-0152 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0154       TCGA-06-0155       TCGA-06-0157       TCGA-06-0158 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4213       TCGA-32-4719 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POM121 MUTATED        0      1      0      1
  POM121 WILD-TYPE     77     92     45     59
D79V3, multiclass
[1] "Remove cluster labels:" "POM121 MUTATED"        
clus
  POM121 MUTATED POM121 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0142       TCGA-06-0145       TCGA-06-0151 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0168       TCGA-06-0169 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-87-5896 
"POM121 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  POM121 MUTATED        0      1      1
  POM121 WILD-TYPE    138     60     75
D79V4, multiclass
[1] "Remove cluster labels:" "POM121 MUTATED"        
clus
  POM121 MUTATED POM121 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0142       TCGA-06-0145       TCGA-06-0151 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0168       TCGA-06-0169 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-87-5896 
"POM121 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  POM121 MUTATED        1      5      0
  POM121 WILD-TYPE    294    476      7
D79V5, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              1              294
  CLUS_2              5              476
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POM121 MUTATED        2      1      1      0
  POM121 WILD-TYPE    158    231     63    166
D79V6, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              1              231
  CLUS_3              1               63
  CLUS_4              0              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  POM121 MUTATED        3      1      1
  POM121 WILD-TYPE    224    234    191
D79V7, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              3              224
  CLUS_2              1              234
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  POM121 MUTATED        2      2      1
  POM121 WILD-TYPE    194    188    267
D79V8, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              2              194
  CLUS_2              2              188
  CLUS_3              1              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POM121 MUTATED        1      2      1      0
  POM121 WILD-TYPE    135    105    182     83
D79V9, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              1              135
  CLUS_2              2              105
  CLUS_3              1              182
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  POM121 MUTATED        1      1      2
  POM121 WILD-TYPE    221    183    101
D79V10, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              1              221
  CLUS_2              1              183
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  POM121 MUTATED        1      1      2
  POM121 WILD-TYPE    183    161    157
D79V11, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              1              183
  CLUS_2              1              161
  CLUS_3              2              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POM121 MUTATED        1      0      2      1
  POM121 WILD-TYPE     89    138    186     88
D79V12, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              1               89
  CLUS_2              0              138
  CLUS_3              2              186
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(80) Variable = SLC6A3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A3 MUTATED        0      1      1      1
  SLC6A3 WILD-TYPE     69     42     73     53
D80V1, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              0               69
  CLUS_2              1               42
  CLUS_3              1               73
  CLUS_4              1               53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A3 MUTATED        0      1      1      1
  SLC6A3 WILD-TYPE     63     49     47     78
D80V2, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              0               63
  CLUS_2              1               49
  CLUS_3              1               47
  CLUS_4              1               78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A3 MUTATED        0      2      1      0
  SLC6A3 WILD-TYPE     77     91     44     60
D80V3, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              0               77
  CLUS_2              2               91
  CLUS_3              1               44
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A3 MUTATED        2      0      1
  SLC6A3 WILD-TYPE    136     61     75
D80V4, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              2              136
  CLUS_2              0               61
  CLUS_3              1               75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A3 MUTATED        3      9      0
  SLC6A3 WILD-TYPE    292    472      7
D80V5, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              3              292
  CLUS_2              9              472
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A3 MUTATED        3      4      0      3
  SLC6A3 WILD-TYPE    157    228     64    163
D80V6, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              3              157
  CLUS_2              4              228
  CLUS_3              0               64
  CLUS_4              3              163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A3 MUTATED        3      4      3
  SLC6A3 WILD-TYPE    224    231    189
D80V7, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              3              224
  CLUS_2              4              231
  CLUS_3              3              189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A3 MUTATED        2      4      4
  SLC6A3 WILD-TYPE    194    186    264
D80V8, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              2              194
  CLUS_2              4              186
  CLUS_3              4              264
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A3 MUTATED        2      4      1      2
  SLC6A3 WILD-TYPE    134    103    182     81
D80V9, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              2              134
  CLUS_2              4              103
  CLUS_3              1              182
  CLUS_4              2               81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A3 MUTATED        4      2      3
  SLC6A3 WILD-TYPE    218    182    100
D80V10, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              4              218
  CLUS_2              2              182
  CLUS_3              3              100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A3 MUTATED        3      2      4
  SLC6A3 WILD-TYPE    181    160    155
D80V11, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              3              181
  CLUS_2              2              160
  CLUS_3              4              155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A3 MUTATED        3      1      4      1
  SLC6A3 WILD-TYPE     87    137    184     88
D80V12, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              3               87
  CLUS_2              1              137
  CLUS_3              4              184
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(81) Variable = SMOC1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMOC1 MUTATED        0      0      1      0
  SMOC1 WILD-TYPE     69     43     73     54
D81V1, multiclass
[1] "Remove cluster labels:" "SMOC1 MUTATED"         
clus
  SMOC1 MUTATED SMOC1 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0789 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMOC1 MUTATED        0      0      1      0
  SMOC1 WILD-TYPE     63     50     47     79
D81V2, multiclass
[1] "Remove cluster labels:" "SMOC1 MUTATED"         
clus
  SMOC1 MUTATED SMOC1 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0789 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMOC1 MUTATED        0      1      0      0
  SMOC1 WILD-TYPE     77     92     45     60
D81V3, multiclass
[1] "Remove cluster labels:" "SMOC1 MUTATED"         
clus
  SMOC1 MUTATED SMOC1 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0789      TCGA-14-0790 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMOC1 MUTATED        0      0      1
  SMOC1 WILD-TYPE    138     61     75
D81V4, multiclass
[1] "Remove cluster labels:" "SMOC1 MUTATED"         
clus
  SMOC1 MUTATED SMOC1 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0789      TCGA-14-0790 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMOC1 MUTATED        1      3      0
  SMOC1 WILD-TYPE    294    478      7
D81V5, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             1             294
  CLUS_2             3             478
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMOC1 MUTATED        0      2      1      0
  SMOC1 WILD-TYPE    160    230     63    166
D81V6, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             0             160
  CLUS_2             2             230
  CLUS_3             1              63
  CLUS_4             0             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMOC1 MUTATED        1      2      1
  SMOC1 WILD-TYPE    226    233    191
D81V7, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             1             226
  CLUS_2             2             233
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMOC1 MUTATED        1      2      1
  SMOC1 WILD-TYPE    195    188    267
D81V8, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             2             188
  CLUS_3             1             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMOC1 MUTATED        2      0      1      0
  SMOC1 WILD-TYPE    134    107    182     83
D81V9, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             2             134
  CLUS_2             0             107
  CLUS_3             1             182
  CLUS_4             0              83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMOC1 MUTATED        2      1      0
  SMOC1 WILD-TYPE    220    183    103
D81V10, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             2             220
  CLUS_2             1             183
  CLUS_3             0             103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMOC1 MUTATED        2      0      1
  SMOC1 WILD-TYPE    182    162    158
D81V11, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             2             182
  CLUS_2             0             162
  CLUS_3             1             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMOC1 MUTATED        2      0      1      0
  SMOC1 WILD-TYPE     88    138    187     89
D81V12, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             2              88
  CLUS_2             0             138
  CLUS_3             1             187
  CLUS_4             0              89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(82) Variable = MYT1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYT1 MUTATED        0      0      0      0
  MYT1 WILD-TYPE     69     43     74     54
D82V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYT1 MUTATED        0      0      0      0
  MYT1 WILD-TYPE     63     50     48     79
D82V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYT1 MUTATED        0      0      0      0
  MYT1 WILD-TYPE     77     93     45     60
D82V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYT1 MUTATED        0      0      0
  MYT1 WILD-TYPE    138     61     76
D82V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYT1 MUTATED        0      6      0
  MYT1 WILD-TYPE    295    475      7
D82V5, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            0            295
  CLUS_2            6            475
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYT1 MUTATED        1      4      1      0
  MYT1 WILD-TYPE    159    228     63    166
D82V6, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            1            159
  CLUS_2            4            228
  CLUS_3            1             63
  CLUS_4            0            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYT1 MUTATED        2      3      1
  MYT1 WILD-TYPE    225    232    191
D82V7, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            2            225
  CLUS_2            3            232
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYT1 MUTATED        0      5      1
  MYT1 WILD-TYPE    196    185    267
D82V8, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            5            185
  CLUS_3            1            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYT1 MUTATED        0      2      3      1
  MYT1 WILD-TYPE    136    105    180     82
D82V9, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            0            136
  CLUS_2            2            105
  CLUS_3            3            180
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYT1 MUTATED        2      2      2
  MYT1 WILD-TYPE    220    182    101
D82V10, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            2            220
  CLUS_2            2            182
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYT1 MUTATED        1      2      3
  MYT1 WILD-TYPE    183    160    156
D82V11, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            1            183
  CLUS_2            2            160
  CLUS_3            3            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYT1 MUTATED        1      1      3      1
  MYT1 WILD-TYPE     89    137    185     88
D82V12, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            1             89
  CLUS_2            1            137
  CLUS_3            3            185
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(83) Variable = DOCK5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED        4      3      1      1
  DOCK5 WILD-TYPE     65     40     73     53
D83V1, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             4              65
  CLUS_2             3              40
  CLUS_3             1              73
  CLUS_4             1              53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED        2      2      1      4
  DOCK5 WILD-TYPE     61     48     47     75
D83V2, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             2              61
  CLUS_2             2              48
  CLUS_3             1              47
  CLUS_4             4              75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED        6      1      0      3
  DOCK5 WILD-TYPE     71     92     45     57
D83V3, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             6              71
  CLUS_2             1              92
  CLUS_3             0              45
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED        3      4      3
  DOCK5 WILD-TYPE    135     57     73
D83V4, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             3             135
  CLUS_2             4              57
  CLUS_3             3              73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED       13      6      0
  DOCK5 WILD-TYPE    282    475      7
D83V5, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1            13             282
  CLUS_2             6             475
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED        8      4      0      1
  DOCK5 WILD-TYPE    152    228     64    165
D83V6, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             8             152
  CLUS_2             4             228
  CLUS_3             0              64
  CLUS_4             1             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED       12      3      2
  DOCK5 WILD-TYPE    215    232    190
D83V7, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1            12             215
  CLUS_2             3             232
  CLUS_3             2             190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED       11      4      2
  DOCK5 WILD-TYPE    185    186    266
D83V8, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1            11             185
  CLUS_2             4             186
  CLUS_3             2             266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED        2      6      2      0
  DOCK5 WILD-TYPE    134    101    181     83
D83V9, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             2             134
  CLUS_2             6             101
  CLUS_3             2             181
  CLUS_4             0              83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED        2      3      5
  DOCK5 WILD-TYPE    220    181     98
D83V10, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             2             220
  CLUS_2             3             181
  CLUS_3             5              98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED        4      2      4
  DOCK5 WILD-TYPE    180    160    155
D83V11, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             4             180
  CLUS_2             2             160
  CLUS_3             4             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED        1      1      5      3
  DOCK5 WILD-TYPE     89    137    183     86
D83V12, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             1              89
  CLUS_2             1             137
  CLUS_3             5             183
  CLUS_4             3              86
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(84) Variable = SLFN11 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN11 MUTATED        1      0      0      0
  SLFN11 WILD-TYPE     68     43     74     54
D84V1, multiclass
[1] "Remove cluster labels:" "SLFN11 MUTATED"        
clus
  SLFN11 MUTATED SLFN11 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1991 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN11 MUTATED        1      0      0      0
  SLFN11 WILD-TYPE     62     50     48     79
D84V2, multiclass
[1] "Remove cluster labels:" "SLFN11 MUTATED"        
clus
  SLFN11 MUTATED SLFN11 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1991 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN11 MUTATED        0      0      0      1
  SLFN11 WILD-TYPE     77     93     45     59
D84V3, multiclass
[1] "Remove cluster labels:" "SLFN11 MUTATED"        
clus
  SLFN11 MUTATED SLFN11 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5953 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5139       TCGA-26-6173       TCGA-26-6174       TCGA-27-1830 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2502       TCGA-28-2509 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5211 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN11 MUTATED        0      1      0
  SLFN11 WILD-TYPE    138     60     76
D84V4, multiclass
[1] "Remove cluster labels:" "SLFN11 MUTATED"        
clus
  SLFN11 MUTATED SLFN11 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5953 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5139       TCGA-26-6173       TCGA-26-6174       TCGA-27-1830 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2502       TCGA-28-2509 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5211 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN11 MUTATED        1      4      0
  SLFN11 WILD-TYPE    294    477      7
D84V5, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              1              294
  CLUS_2              4              477
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN11 MUTATED        1      2      0      1
  SLFN11 WILD-TYPE    159    230     64    165
D84V6, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              1              159
  CLUS_2              2              230
  CLUS_3              0               64
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN11 MUTATED        1      1      2
  SLFN11 WILD-TYPE    226    234    190
D84V7, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              1              226
  CLUS_2              1              234
  CLUS_3              2              190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN11 MUTATED        0      2      2
  SLFN11 WILD-TYPE    196    188    266
D84V8, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              0              196
  CLUS_2              2              188
  CLUS_3              2              266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN11 MUTATED        1      2      1      0
  SLFN11 WILD-TYPE    135    105    182     83
D84V9, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              1              135
  CLUS_2              2              105
  CLUS_3              1              182
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN11 MUTATED        3      0      1
  SLFN11 WILD-TYPE    219    184    102
D84V10, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              3              219
  CLUS_2              0              184
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN11 MUTATED        2      0      2
  SLFN11 WILD-TYPE    182    162    157
D84V11, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              2              182
  CLUS_2              0              162
  CLUS_3              2              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN11 MUTATED        0      2      2      0
  SLFN11 WILD-TYPE     90    136    186     89
D84V12, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              0               90
  CLUS_2              2              136
  CLUS_3              2              186
  CLUS_4              0               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(85) Variable = DLC1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLC1 MUTATED        0      0      2      1
  DLC1 WILD-TYPE     69     43     72     53
D85V1, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            0             69
  CLUS_2            0             43
  CLUS_3            2             72
  CLUS_4            1             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLC1 MUTATED        0      1      2      0
  DLC1 WILD-TYPE     63     49     46     79
D85V2, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            0             63
  CLUS_2            1             49
  CLUS_3            2             46
  CLUS_4            0             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLC1 MUTATED        1      0      1      1
  DLC1 WILD-TYPE     76     93     44     59
D85V3, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            1             76
  CLUS_2            0             93
  CLUS_3            1             44
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLC1 MUTATED        1      2      0
  DLC1 WILD-TYPE    137     59     76
D85V4, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            1            137
  CLUS_2            2             59
  CLUS_3            0             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLC1 MUTATED        4      4      0
  DLC1 WILD-TYPE    291    477      7
D85V5, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            4            291
  CLUS_2            4            477
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLC1 MUTATED        4      2      0      1
  DLC1 WILD-TYPE    156    230     64    165
D85V6, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            4            156
  CLUS_2            2            230
  CLUS_3            0             64
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLC1 MUTATED        5      2      1
  DLC1 WILD-TYPE    222    233    191
D85V7, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            5            222
  CLUS_2            2            233
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLC1 MUTATED        4      3      1
  DLC1 WILD-TYPE    192    187    267
D85V8, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            4            192
  CLUS_2            3            187
  CLUS_3            1            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLC1 MUTATED        1      2      2      1
  DLC1 WILD-TYPE    135    105    181     82
D85V9, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            1            135
  CLUS_2            2            105
  CLUS_3            2            181
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLC1 MUTATED        1      2      3
  DLC1 WILD-TYPE    221    182    100
D85V10, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            1            221
  CLUS_2            2            182
  CLUS_3            3            100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLC1 MUTATED        3      1      2
  DLC1 WILD-TYPE    181    161    157
D85V11, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            3            181
  CLUS_2            1            161
  CLUS_3            2            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLC1 MUTATED        0      0      4      2
  DLC1 WILD-TYPE     90    138    184     87
D85V12, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            0            138
  CLUS_3            4            184
  CLUS_4            2             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(86) Variable = PPL MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPL MUTATED        0      0      1      2
  PPL WILD-TYPE     69     43     73     52
D86V1, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           0            69
  CLUS_2           0            43
  CLUS_3           1            73
  CLUS_4           2            52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPL MUTATED        0      1      1      1
  PPL WILD-TYPE     63     49     47     78
D86V2, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           0            63
  CLUS_2           1            49
  CLUS_3           1            47
  CLUS_4           1            78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPL MUTATED        0      2      0      1
  PPL WILD-TYPE     77     91     45     59
D86V3, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           0            77
  CLUS_2           2            91
  CLUS_3           0            45
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PPL MUTATED        1      1      1
  PPL WILD-TYPE    137     60     75
D86V4, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           1           137
  CLUS_2           1            60
  CLUS_3           1            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PPL MUTATED        2      6      0
  PPL WILD-TYPE    293    475      7
D86V5, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           2           293
  CLUS_2           6           475
  CLUS_3           0             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPL MUTATED        2      4      0      2
  PPL WILD-TYPE    158    228     64    164
D86V6, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           2           158
  CLUS_2           4           228
  CLUS_3           0            64
  CLUS_4           2           164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PPL MUTATED        4      2      3
  PPL WILD-TYPE    223    233    189
D86V7, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           4           223
  CLUS_2           2           233
  CLUS_3           3           189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PPL MUTATED        2      4      3
  PPL WILD-TYPE    194    186    265
D86V8, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           2           194
  CLUS_2           4           186
  CLUS_3           3           265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPL MUTATED        0      3      3      0
  PPL WILD-TYPE    136    104    180     83
D86V9, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           0           136
  CLUS_2           3           104
  CLUS_3           3           180
  CLUS_4           0            83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PPL MUTATED        2      2      2
  PPL WILD-TYPE    220    182    101
D86V10, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           2           220
  CLUS_2           2           182
  CLUS_3           2           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PPL MUTATED        1      4      1
  PPL WILD-TYPE    183    158    158
D86V11, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           1           183
  CLUS_2           4           158
  CLUS_3           1           158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPL MUTATED        1      3      2      0
  PPL WILD-TYPE     89    135    186     89
D86V12, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           1            89
  CLUS_2           3           135
  CLUS_3           2           186
  CLUS_4           0            89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(87) Variable = CMA1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CMA1 MUTATED        0      0      0      0
  CMA1 WILD-TYPE     69     43     74     54
D87V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CMA1 MUTATED        0      0      0      0
  CMA1 WILD-TYPE     63     50     48     79
D87V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CMA1 MUTATED        0      0      1      0
  CMA1 WILD-TYPE     77     93     44     60
D87V3, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6701     TCGA-08-0386 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CMA1 MUTATED        1      0      0
  CMA1 WILD-TYPE    137     61     76
D87V4, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6701     TCGA-08-0386 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CMA1 MUTATED        1      2      0
  CMA1 WILD-TYPE    294    479      7
D87V5, multiclass
        clus
vv       CMA1 MUTATED CMA1 WILD-TYPE
  CLUS_1            1            294
  CLUS_2            2            479
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CMA1 MUTATED        2      1      0      0
  CMA1 WILD-TYPE    158    231     64    166
D87V6, multiclass
        clus
vv       CMA1 MUTATED CMA1 WILD-TYPE
  CLUS_1            2            158
  CLUS_2            1            231
  CLUS_3            0             64
  CLUS_4            0            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CMA1 MUTATED        1      1      0
  CMA1 WILD-TYPE    226    234    192
D87V7, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             2            652 
    TCGA-02-0047     TCGA-02-0055     TCGA-02-2483     TCGA-02-2485 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-02-2486     TCGA-06-0129     TCGA-06-0130     TCGA-06-0132 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0157     TCGA-06-0158     TCGA-06-0168 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0174     TCGA-06-0178     TCGA-06-0184     TCGA-06-0219 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0238     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0649     TCGA-06-0686     TCGA-06-0743     TCGA-06-0744 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0745     TCGA-06-0747     TCGA-06-0749     TCGA-06-0750 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0882     TCGA-06-1804     TCGA-06-2557 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-08-0386     TCGA-12-0616 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0821     TCGA-12-1597 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-5299     TCGA-14-0781     TCGA-14-0787     TCGA-14-0789 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0817     TCGA-14-1823     TCGA-14-1825 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-15-0742     TCGA-15-1444 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-1045     TCGA-19-1390     TCGA-19-2619 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1834 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1837     TCGA-27-2519     TCGA-27-2521 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2528 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2499     TCGA-28-2509 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5213 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5220 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1980     TCGA-32-1982     TCGA-32-2615 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4213 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-3915 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4932     TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-4943     TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-5394     TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6670     TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5275     TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5279     TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A75M     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5305 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74J     TCGA-HT-A74K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CMA1 MUTATED        0      2      0
  CMA1 WILD-TYPE    196    188    268
D87V8, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             2            652 
    TCGA-02-0047     TCGA-02-0055     TCGA-02-2483     TCGA-02-2485 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-02-2486     TCGA-06-0129     TCGA-06-0130     TCGA-06-0132 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0157     TCGA-06-0158     TCGA-06-0168 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0174     TCGA-06-0178     TCGA-06-0184     TCGA-06-0219 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0238     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0649     TCGA-06-0686     TCGA-06-0743     TCGA-06-0744 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0745     TCGA-06-0747     TCGA-06-0749     TCGA-06-0750 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0882     TCGA-06-1804     TCGA-06-2557 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-08-0386     TCGA-12-0616 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0821     TCGA-12-1597 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-5299     TCGA-14-0781     TCGA-14-0787     TCGA-14-0789 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0817     TCGA-14-1823     TCGA-14-1825 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-15-0742     TCGA-15-1444 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-1045     TCGA-19-1390     TCGA-19-2619 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1834 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1837     TCGA-27-2519     TCGA-27-2521 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2528 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2499     TCGA-28-2509 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5213 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5220 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1980     TCGA-32-1982     TCGA-32-2615 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4213 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-3915 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4932     TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-4943     TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-5394     TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6670     TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5275     TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5279     TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A75M     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5305 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74J     TCGA-HT-A74K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CMA1 MUTATED        0      2      0      0
  CMA1 WILD-TYPE    136    105    183     83
D87V9, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             2            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CMA1 MUTATED        1      0      1
  CMA1 WILD-TYPE    221    184    102
D87V10, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             2            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CMA1 MUTATED        0      1      1
  CMA1 WILD-TYPE    184    161    158
D87V11, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             2            503 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5305 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495     TCGA-HW-8319 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CMA1 MUTATED        0      1      1      0
  CMA1 WILD-TYPE     90    137    187     89
D87V12, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             2            503 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5305 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495     TCGA-HW-8319 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 

Clustering(88) Variable = PRKCD MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        0      2      1      0
  PRKCD WILD-TYPE     69     41     73     54
D88V1, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             0              69
  CLUS_2             2              41
  CLUS_3             1              73
  CLUS_4             0              54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        0      2      1      0
  PRKCD WILD-TYPE     63     48     47     79
D88V2, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             0              63
  CLUS_2             2              48
  CLUS_3             1              47
  CLUS_4             0              79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        0      3      0      0
  PRKCD WILD-TYPE     77     90     45     60
D88V3, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             0              77
  CLUS_2             3              90
  CLUS_3             0              45
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        2      0      1
  PRKCD WILD-TYPE    136     61     75
D88V4, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             2             136
  CLUS_2             0              61
  CLUS_3             1              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        2      0      1
  PRKCD WILD-TYPE    293    481      6
D88V5, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             2             293
  CLUS_2             0             481
  CLUS_3             1               6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        1      0      0      0
  PRKCD WILD-TYPE    159    232     64    166
D88V6, multiclass
[1] "Remove cluster labels:" "PRKCD MUTATED"         
clus
  PRKCD MUTATED PRKCD WILD-TYPE 
              1             621 
     TCGA-06-0152      TCGA-06-0650      TCGA-06-1804      TCGA-06-1806 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0862      TCGA-14-1043      TCGA-14-1395 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-14-1450      TCGA-15-1444      TCGA-19-5947      TCGA-19-5950 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5134      TCGA-26-5135 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-26-5136      TCGA-26-5139      TCGA-26-6173      TCGA-26-6174 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-2501      TCGA-28-2510      TCGA-28-5204      TCGA-28-5207 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1979 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-32-1980      TCGA-32-5222      TCGA-41-5651      TCGA-41-6646 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-74-6573      TCGA-74-6575      TCGA-74-6577      TCGA-74-6578 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-74-6584      TCGA-76-4925      TCGA-76-4926      TCGA-76-4927 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-4928      TCGA-76-4929      TCGA-76-4931      TCGA-76-4932 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-4934      TCGA-76-4935      TCGA-76-6191      TCGA-76-6192 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-6193      TCGA-76-6280      TCGA-76-6282      TCGA-76-6283 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-6285      TCGA-76-6286      TCGA-76-6656      TCGA-76-6657 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-6660      TCGA-76-6661      TCGA-76-6662      TCGA-76-6663 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-6664      TCGA-81-5910      TCGA-81-5911      TCGA-87-5896 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-WY-A85E 
"PRKCD WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        1      0      0
  PRKCD WILD-TYPE    226    235    192
D88V7, multiclass
[1] "Remove cluster labels:" "PRKCD MUTATED"         
clus
  PRKCD MUTATED PRKCD WILD-TYPE 
              1             653 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5134 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1834      TCGA-27-1835 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-1837      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2528      TCGA-28-1747 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2499      TCGA-28-2509      TCGA-28-2510 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5213      TCGA-28-5215 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5220      TCGA-32-1970 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-2615      TCGA-32-2632 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4213      TCGA-32-5222 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-3915      TCGA-41-4097 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-41-5651      TCGA-76-4925      TCGA-76-4926      TCGA-76-4927 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-4928      TCGA-76-4929      TCGA-76-4931      TCGA-76-4932 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-WY-A85E 
"PRKCD WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        0      1      0
  PRKCD WILD-TYPE    196    189    268
D88V8, multiclass
[1] "Remove cluster labels:" "PRKCD MUTATED"         
clus
  PRKCD MUTATED PRKCD WILD-TYPE 
              1             653 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5134 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1834      TCGA-27-1835 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-1837      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2528      TCGA-28-1747 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2499      TCGA-28-2509      TCGA-28-2510 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5213      TCGA-28-5215 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5220      TCGA-32-1970 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-2615      TCGA-32-2632 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4213      TCGA-32-5222 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-3915      TCGA-41-4097 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-41-5651      TCGA-76-4925      TCGA-76-4926      TCGA-76-4927 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-4928      TCGA-76-4929      TCGA-76-4931      TCGA-76-4932 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-WY-A85E 
"PRKCD WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        0      0      0      0
  PRKCD WILD-TYPE    136    107    183     83
D88V9, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        0      0      0
  PRKCD WILD-TYPE    222    184    103
D88V10, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        0      0      0
  PRKCD WILD-TYPE    184    162    159
D88V11, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        0      0      0      0
  PRKCD WILD-TYPE     90    138    188     89
D88V12, multiclass

Clustering(89) Variable = ANO1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANO1 MUTATED        0      0      2      1
  ANO1 WILD-TYPE     69     43     72     53
D89V1, multiclass
        clus
vv       ANO1 MUTATED ANO1 WILD-TYPE
  CLUS_1            0             69
  CLUS_2            0             43
  CLUS_3            2             72
  CLUS_4            1             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANO1 MUTATED        0      1      2      0
  ANO1 WILD-TYPE     63     49     46     79
D89V2, multiclass
        clus
vv       ANO1 MUTATED ANO1 WILD-TYPE
  CLUS_1            0             63
  CLUS_2            1             49
  CLUS_3            2             46
  CLUS_4            0             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANO1 MUTATED        1      1      0      1
  ANO1 WILD-TYPE     76     92     45     59
D89V3, multiclass
        clus
vv       ANO1 MUTATED ANO1 WILD-TYPE
  CLUS_1            1             76
  CLUS_2            1             92
  CLUS_3            0             45
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ANO1 MUTATED        1      1      1
  ANO1 WILD-TYPE    137     60     75
D89V4, multiclass
        clus
vv       ANO1 MUTATED ANO1 WILD-TYPE
  CLUS_1            1            137
  CLUS_2            1             60
  CLUS_3            1             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ANO1 MUTATED        5      4      0
  ANO1 WILD-TYPE    290    477      7
D89V5, multiclass
        clus
vv       ANO1 MUTATED ANO1 WILD-TYPE
  CLUS_1            5            290
  CLUS_2            4            477
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANO1 MUTATED        4      1      0      2
  ANO1 WILD-TYPE    156    231     64    164
D89V6, multiclass
        clus
vv       ANO1 MUTATED ANO1 WILD-TYPE
  CLUS_1            4            156
  CLUS_2            1            231
  CLUS_3            0             64
  CLUS_4            2            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ANO1 MUTATED        4      2      1
  ANO1 WILD-TYPE    223    233    191
D89V7, multiclass
        clus
vv       ANO1 MUTATED ANO1 WILD-TYPE
  CLUS_1            4            223
  CLUS_2            2            233
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ANO1 MUTATED        3      2      2
  ANO1 WILD-TYPE    193    188    266
D89V8, multiclass
        clus
vv       ANO1 MUTATED ANO1 WILD-TYPE
  CLUS_1            3            193
  CLUS_2            2            188
  CLUS_3            2            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANO1 MUTATED        2      2      1      1
  ANO1 WILD-TYPE    134    105    182     82
D89V9, multiclass
        clus
vv       ANO1 MUTATED ANO1 WILD-TYPE
  CLUS_1            2            134
  CLUS_2            2            105
  CLUS_3            1            182
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ANO1 MUTATED        2      1      3
  ANO1 WILD-TYPE    220    183    100
D89V10, multiclass
        clus
vv       ANO1 MUTATED ANO1 WILD-TYPE
  CLUS_1            2            220
  CLUS_2            1            183
  CLUS_3            3            100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ANO1 MUTATED        2      3      1
  ANO1 WILD-TYPE    182    159    158
D89V11, multiclass
        clus
vv       ANO1 MUTATED ANO1 WILD-TYPE
  CLUS_1            2            182
  CLUS_2            3            159
  CLUS_3            1            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANO1 MUTATED        0      2      2      2
  ANO1 WILD-TYPE     90    136    186     87
D89V12, multiclass
        clus
vv       ANO1 MUTATED ANO1 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            2            136
  CLUS_3            2            186
  CLUS_4            2             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(90) Variable = PLXNA3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNA3 MUTATED        1      0      0      0
  PLXNA3 WILD-TYPE     68     43     74     54
D90V1, multiclass
[1] "Remove cluster labels:" "PLXNA3 MUTATED"        
clus
  PLXNA3 MUTATED PLXNA3 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5413       TCGA-06-5414 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNA3 MUTATED        1      0      0      0
  PLXNA3 WILD-TYPE     62     50     48     79
D90V2, multiclass
[1] "Remove cluster labels:" "PLXNA3 MUTATED"        
clus
  PLXNA3 MUTATED PLXNA3 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5413       TCGA-06-5414 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNA3 MUTATED        0      0      0      1
  PLXNA3 WILD-TYPE     77     93     45     59
D90V3, multiclass
[1] "Remove cluster labels:" "PLXNA3 MUTATED"        
clus
  PLXNA3 MUTATED PLXNA3 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5413 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNA3 MUTATED        0      1      0
  PLXNA3 WILD-TYPE    138     60     76
D90V4, multiclass
[1] "Remove cluster labels:" "PLXNA3 MUTATED"        
clus
  PLXNA3 MUTATED PLXNA3 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5413 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNA3 MUTATED        2      8      0
  PLXNA3 WILD-TYPE    293    473      7
D90V5, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              2              293
  CLUS_2              8              473
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNA3 MUTATED        2      2      2      4
  PLXNA3 WILD-TYPE    158    230     62    162
D90V6, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              2              230
  CLUS_3              2               62
  CLUS_4              4              162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNA3 MUTATED        4      5      1
  PLXNA3 WILD-TYPE    223    230    191
D90V7, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              4              223
  CLUS_2              5              230
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNA3 MUTATED        3      4      3
  PLXNA3 WILD-TYPE    193    186    265
D90V8, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              3              193
  CLUS_2              4              186
  CLUS_3              3              265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNA3 MUTATED        3      3      1      2
  PLXNA3 WILD-TYPE    133    104    182     81
D90V9, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              3              133
  CLUS_2              3              104
  CLUS_3              1              182
  CLUS_4              2               81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNA3 MUTATED        5      1      3
  PLXNA3 WILD-TYPE    217    183    100
D90V10, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              5              217
  CLUS_2              1              183
  CLUS_3              3              100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNA3 MUTATED        4      4      1
  PLXNA3 WILD-TYPE    180    158    158
D90V11, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              4              180
  CLUS_2              4              158
  CLUS_3              1              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNA3 MUTATED        1      3      3      2
  PLXNA3 WILD-TYPE     89    135    185     87
D90V12, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              1               89
  CLUS_2              3              135
  CLUS_3              3              185
  CLUS_4              2               87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(91) Variable = NAP1L2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAP1L2 MUTATED        1      0      0      1
  NAP1L2 WILD-TYPE     68     43     74     53
D91V1, multiclass
[1] "Remove cluster labels:" "NAP1L2 MUTATED"        
clus
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2559       TCGA-06-2561       TCGA-06-2562       TCGA-06-2563 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2564       TCGA-06-2565       TCGA-06-2567       TCGA-06-2569 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2570       TCGA-06-5408       TCGA-06-5410       TCGA-06-5411 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5412       TCGA-06-5413       TCGA-06-5414       TCGA-06-5415 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5417       TCGA-06-5418       TCGA-06-5856       TCGA-06-5858 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5859       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0781 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0871       TCGA-14-1456 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5954       TCGA-19-5955 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAP1L2 MUTATED        1      1      0      0
  NAP1L2 WILD-TYPE     62     49     48     79
D91V2, multiclass
[1] "Remove cluster labels:" "NAP1L2 MUTATED"        
clus
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2559       TCGA-06-2561       TCGA-06-2562       TCGA-06-2563 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2564       TCGA-06-2565       TCGA-06-2567       TCGA-06-2569 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2570       TCGA-06-5408       TCGA-06-5410       TCGA-06-5411 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5412       TCGA-06-5413       TCGA-06-5414       TCGA-06-5415 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5417       TCGA-06-5418       TCGA-06-5856       TCGA-06-5858 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5859       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0781 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0871       TCGA-14-1456 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5954       TCGA-19-5955 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAP1L2 MUTATED        0      0      1      1
  NAP1L2 WILD-TYPE     77     93     44     59
D91V3, multiclass
[1] "Remove cluster labels:" "NAP1L2 MUTATED"        
clus
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6388       TCGA-06-6389 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-06-6693       TCGA-06-6694 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-6695       TCGA-06-6697       TCGA-06-6698       TCGA-06-6699 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-6700       TCGA-06-6701       TCGA-08-0386       TCGA-12-0616 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0740       TCGA-14-0781       TCGA-14-0786 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0787       TCGA-14-0789       TCGA-14-0790       TCGA-14-0813 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0817       TCGA-14-0862       TCGA-14-0871       TCGA-14-1043 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-1395       TCGA-14-1450       TCGA-14-1456       TCGA-14-1823 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-1825       TCGA-14-1829       TCGA-14-2554       TCGA-14-3476 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-4157       TCGA-15-0742       TCGA-15-1444       TCGA-16-0846 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-16-0861       TCGA-16-1045       TCGA-16-1048       TCGA-19-1390 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-1790       TCGA-19-2619       TCGA-19-2620       TCGA-19-2623 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-2624       TCGA-19-2625       TCGA-19-2629       TCGA-19-2631 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-4068       TCGA-19-5947       TCGA-19-5950       TCGA-19-5951 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5952       TCGA-19-5953       TCGA-19-5954       TCGA-19-5955 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-87-5896 
"NAP1L2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NAP1L2 MUTATED        1      1      0
  NAP1L2 WILD-TYPE    137     60     76
D91V4, multiclass
[1] "Remove cluster labels:" "NAP1L2 MUTATED"        
clus
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6388       TCGA-06-6389 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-06-6693       TCGA-06-6694 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-6695       TCGA-06-6697       TCGA-06-6698       TCGA-06-6699 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-6700       TCGA-06-6701       TCGA-08-0386       TCGA-12-0616 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0740       TCGA-14-0781       TCGA-14-0786 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0787       TCGA-14-0789       TCGA-14-0790       TCGA-14-0813 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0817       TCGA-14-0862       TCGA-14-0871       TCGA-14-1043 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-1395       TCGA-14-1450       TCGA-14-1456       TCGA-14-1823 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-1825       TCGA-14-1829       TCGA-14-2554       TCGA-14-3476 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-4157       TCGA-15-0742       TCGA-15-1444       TCGA-16-0846 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-16-0861       TCGA-16-1045       TCGA-16-1048       TCGA-19-1390 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-1790       TCGA-19-2619       TCGA-19-2620       TCGA-19-2623 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-2624       TCGA-19-2625       TCGA-19-2629       TCGA-19-2631 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-4068       TCGA-19-5947       TCGA-19-5950       TCGA-19-5951 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5952       TCGA-19-5953       TCGA-19-5954       TCGA-19-5955 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-87-5896 
"NAP1L2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NAP1L2 MUTATED        2      4      0
  NAP1L2 WILD-TYPE    293    477      7
D91V5, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              2              293
  CLUS_2              4              477
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAP1L2 MUTATED        0      2      0      2
  NAP1L2 WILD-TYPE    160    230     64    164
D91V6, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              0              160
  CLUS_2              2              230
  CLUS_3              0               64
  CLUS_4              2              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NAP1L2 MUTATED        1      2      2
  NAP1L2 WILD-TYPE    226    233    190
D91V7, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              1              226
  CLUS_2              2              233
  CLUS_3              2              190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NAP1L2 MUTATED        1      2      2
  NAP1L2 WILD-TYPE    195    188    266
D91V8, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              2              188
  CLUS_3              2              266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAP1L2 MUTATED        1      1      2      0
  NAP1L2 WILD-TYPE    135    106    181     83
D91V9, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              1              135
  CLUS_2              1              106
  CLUS_3              2              181
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NAP1L2 MUTATED        2      2      0
  NAP1L2 WILD-TYPE    220    182    103
D91V10, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              2              220
  CLUS_2              2              182
  CLUS_3              0              103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NAP1L2 MUTATED        2      1      1
  NAP1L2 WILD-TYPE    182    161    158
D91V11, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              2              182
  CLUS_2              1              161
  CLUS_3              1              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAP1L2 MUTATED        1      1      2      0
  NAP1L2 WILD-TYPE     89    137    186     89
D91V12, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              1               89
  CLUS_2              1              137
  CLUS_3              2              186
  CLUS_4              0               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(92) Variable = PLCH2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCH2 MUTATED        0      0      2      0
  PLCH2 WILD-TYPE     69     43     72     54
D92V1, multiclass
[1] "Remove cluster labels:" "PLCH2 MUTATED"         
clus
  PLCH2 MUTATED PLCH2 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCH2 MUTATED        0      1      1      0
  PLCH2 WILD-TYPE     63     49     47     79
D92V2, multiclass
[1] "Remove cluster labels:" "PLCH2 MUTATED"         
clus
  PLCH2 MUTATED PLCH2 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCH2 MUTATED        0      1      0      1
  PLCH2 WILD-TYPE     77     92     45     59
D92V3, multiclass
[1] "Remove cluster labels:" "PLCH2 MUTATED"         
clus
  PLCH2 MUTATED PLCH2 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2564      TCGA-06-2565 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-87-5896 
"PLCH2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCH2 MUTATED        2      0      0
  PLCH2 WILD-TYPE    136     61     76
D92V4, multiclass
[1] "Remove cluster labels:" "PLCH2 MUTATED"         
clus
  PLCH2 MUTATED PLCH2 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2564      TCGA-06-2565 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" "PLCH2 WILD-TYPE" 
     TCGA-87-5896 
"PLCH2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCH2 MUTATED        3      3      0
  PLCH2 WILD-TYPE    292    478      7
D92V5, multiclass
        clus
vv       PLCH2 MUTATED PLCH2 WILD-TYPE
  CLUS_1             3             292
  CLUS_2             3             478
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCH2 MUTATED        2      0      1      1
  PLCH2 WILD-TYPE    158    232     63    165
D92V6, multiclass
        clus
vv       PLCH2 MUTATED PLCH2 WILD-TYPE
  CLUS_1             2             158
  CLUS_2             0             232
  CLUS_3             1              63
  CLUS_4             1             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCH2 MUTATED        3      1      2
  PLCH2 WILD-TYPE    224    234    190
D92V7, multiclass
        clus
vv       PLCH2 MUTATED PLCH2 WILD-TYPE
  CLUS_1             3             224
  CLUS_2             1             234
  CLUS_3             2             190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCH2 MUTATED        2      2      2
  PLCH2 WILD-TYPE    194    188    266
D92V8, multiclass
        clus
vv       PLCH2 MUTATED PLCH2 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             2             188
  CLUS_3             2             266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCH2 MUTATED        1      1      1      1
  PLCH2 WILD-TYPE    135    106    182     82
D92V9, multiclass
        clus
vv       PLCH2 MUTATED PLCH2 WILD-TYPE
  CLUS_1             1             135
  CLUS_2             1             106
  CLUS_3             1             182
  CLUS_4             1              82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCH2 MUTATED        1      2      1
  PLCH2 WILD-TYPE    221    182    102
D92V10, multiclass
        clus
vv       PLCH2 MUTATED PLCH2 WILD-TYPE
  CLUS_1             1             221
  CLUS_2             2             182
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCH2 MUTATED        1      1      2
  PLCH2 WILD-TYPE    183    161    157
D92V11, multiclass
        clus
vv       PLCH2 MUTATED PLCH2 WILD-TYPE
  CLUS_1             1             183
  CLUS_2             1             161
  CLUS_3             2             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCH2 MUTATED        1      0      2      1
  PLCH2 WILD-TYPE     89    138    186     88
D92V12, multiclass
        clus
vv       PLCH2 MUTATED PLCH2 WILD-TYPE
  CLUS_1             1              89
  CLUS_2             0             138
  CLUS_3             2             186
  CLUS_4             1              88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(93) Variable = CD1D MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1D MUTATED        1      1      1      0
  CD1D WILD-TYPE     68     42     73     54
D93V1, multiclass
        clus
vv       CD1D MUTATED CD1D WILD-TYPE
  CLUS_1            1             68
  CLUS_2            1             42
  CLUS_3            1             73
  CLUS_4            0             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1D MUTATED        1      1      0      1
  CD1D WILD-TYPE     62     49     48     78
D93V2, multiclass
        clus
vv       CD1D MUTATED CD1D WILD-TYPE
  CLUS_1            1             62
  CLUS_2            1             49
  CLUS_3            0             48
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1D MUTATED        2      2      0      0
  CD1D WILD-TYPE     75     91     45     60
D93V3, multiclass
        clus
vv       CD1D MUTATED CD1D WILD-TYPE
  CLUS_1            2             75
  CLUS_2            2             91
  CLUS_3            0             45
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1D MUTATED        1      0      3
  CD1D WILD-TYPE    137     61     73
D93V4, multiclass
        clus
vv       CD1D MUTATED CD1D WILD-TYPE
  CLUS_1            1            137
  CLUS_2            0             61
  CLUS_3            3             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1D MUTATED        4      0      0
  CD1D WILD-TYPE    291    481      7
D93V5, multiclass
        clus
vv       CD1D MUTATED CD1D WILD-TYPE
  CLUS_1            4            291
  CLUS_2            0            481
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1D MUTATED        3      0      0      0
  CD1D WILD-TYPE    157    232     64    166
D93V6, multiclass
        clus
vv       CD1D MUTATED CD1D WILD-TYPE
  CLUS_1            3            157
  CLUS_2            0            232
  CLUS_3            0             64
  CLUS_4            0            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1D MUTATED        1      0      0
  CD1D WILD-TYPE    226    235    192
D93V7, multiclass
[1] "Remove cluster labels:" "CD1D MUTATED"          
clus
  CD1D MUTATED CD1D WILD-TYPE 
             1            653 
    TCGA-02-0047     TCGA-02-0055     TCGA-02-2483     TCGA-02-2485 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-02-2486     TCGA-06-0129     TCGA-06-0130     TCGA-06-0132 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0157     TCGA-06-0158     TCGA-06-0168 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0174     TCGA-06-0178     TCGA-06-0219     TCGA-06-0238 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0644     TCGA-06-0645     TCGA-06-0646     TCGA-06-0649 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0878 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0882     TCGA-06-1804     TCGA-06-2557     TCGA-06-2558 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-2559     TCGA-06-2561     TCGA-06-2562     TCGA-06-2563 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-2564     TCGA-06-2565     TCGA-06-2567     TCGA-06-2569 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-2570     TCGA-06-5408     TCGA-06-5410     TCGA-06-5411 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-5412     TCGA-06-5413     TCGA-06-5414     TCGA-06-5415 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-5417     TCGA-06-5418     TCGA-06-5856     TCGA-06-5858 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-5859     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0821     TCGA-12-1597     TCGA-12-3650 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-14-0817     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-14-2554     TCGA-15-0742     TCGA-15-1444     TCGA-16-0846 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-16-1045     TCGA-19-1390     TCGA-19-2619     TCGA-19-2620 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-19-2624     TCGA-19-2625     TCGA-19-2629     TCGA-19-5960 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1834     TCGA-27-1835 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-27-1837     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2528     TCGA-28-1747 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2499     TCGA-28-2509     TCGA-28-2510 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5213     TCGA-28-5215 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5220     TCGA-32-1970 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-2615     TCGA-32-2632 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4213     TCGA-32-5222 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-3915     TCGA-41-4097 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-41-5651     TCGA-76-4925     TCGA-76-4926     TCGA-76-4927 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-76-4928     TCGA-76-4929     TCGA-76-4931     TCGA-76-4932 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74J 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A5F6     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA     TCGA-S9-A6UB 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-WY-A85E 
"CD1D WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1D MUTATED        1      0      0
  CD1D WILD-TYPE    195    190    268
D93V8, multiclass
[1] "Remove cluster labels:" "CD1D MUTATED"          
clus
  CD1D MUTATED CD1D WILD-TYPE 
             1            653 
    TCGA-02-0047     TCGA-02-0055     TCGA-02-2483     TCGA-02-2485 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-02-2486     TCGA-06-0129     TCGA-06-0130     TCGA-06-0132 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0157     TCGA-06-0158     TCGA-06-0168 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0174     TCGA-06-0178     TCGA-06-0219     TCGA-06-0238 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0644     TCGA-06-0645     TCGA-06-0646     TCGA-06-0649 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0878 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0882     TCGA-06-1804     TCGA-06-2557     TCGA-06-2558 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-2559     TCGA-06-2561     TCGA-06-2562     TCGA-06-2563 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-2564     TCGA-06-2565     TCGA-06-2567     TCGA-06-2569 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-2570     TCGA-06-5408     TCGA-06-5410     TCGA-06-5411 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-5412     TCGA-06-5413     TCGA-06-5414     TCGA-06-5415 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-5417     TCGA-06-5418     TCGA-06-5856     TCGA-06-5858 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-5859     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0821     TCGA-12-1597     TCGA-12-3650 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-14-0817     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-14-2554     TCGA-15-0742     TCGA-15-1444     TCGA-16-0846 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-16-1045     TCGA-19-1390     TCGA-19-2619     TCGA-19-2620 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-19-2624     TCGA-19-2625     TCGA-19-2629     TCGA-19-5960 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1834     TCGA-27-1835 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-27-1837     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2528     TCGA-28-1747 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2499     TCGA-28-2509     TCGA-28-2510 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5213     TCGA-28-5215 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5220     TCGA-32-1970 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-2615     TCGA-32-2632 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4213     TCGA-32-5222 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-3915     TCGA-41-4097 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-41-5651     TCGA-76-4925     TCGA-76-4926     TCGA-76-4927 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-76-4928     TCGA-76-4929     TCGA-76-4931     TCGA-76-4932 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74J 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A5F6     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA     TCGA-S9-A6UB 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-WY-A85E 
"CD1D WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1D MUTATED        0      0      0      0
  CD1D WILD-TYPE    136    107    183     83
D93V9, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1D MUTATED        0      0      0
  CD1D WILD-TYPE    222    184    103
D93V10, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1D MUTATED        0      0      0
  CD1D WILD-TYPE    184    162    159
D93V11, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1D MUTATED        0      0      0      0
  CD1D WILD-TYPE     90    138    188     89
D93V12, multiclass

Clustering(94) Variable = UBR3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UBR3 MUTATED        0      1      0      0
  UBR3 WILD-TYPE     69     42     74     54
D94V1, multiclass
[1] "Remove cluster labels:" "UBR3 MUTATED"          
clus
  UBR3 MUTATED UBR3 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2561     TCGA-06-2562 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UBR3 MUTATED        0      1      0      0
  UBR3 WILD-TYPE     63     49     48     79
D94V2, multiclass
[1] "Remove cluster labels:" "UBR3 MUTATED"          
clus
  UBR3 MUTATED UBR3 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2561     TCGA-06-2562 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UBR3 MUTATED        0      1      0      0
  UBR3 WILD-TYPE     77     92     45     60
D94V3, multiclass
[1] "Remove cluster labels:" "UBR3 MUTATED"          
clus
  UBR3 MUTATED UBR3 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2561 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UBR3 MUTATED        1      0      0
  UBR3 WILD-TYPE    137     61     76
D94V4, multiclass
[1] "Remove cluster labels:" "UBR3 MUTATED"          
clus
  UBR3 MUTATED UBR3 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2561 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"UBR3 WILD-TYPE" "UBR3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UBR3 MUTATED        1      4      0
  UBR3 WILD-TYPE    294    477      7
D94V5, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            1            294
  CLUS_2            4            477
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UBR3 MUTATED        0      1      1      2
  UBR3 WILD-TYPE    160    231     63    164
D94V6, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            0            160
  CLUS_2            1            231
  CLUS_3            1             63
  CLUS_4            2            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UBR3 MUTATED        1      0      4
  UBR3 WILD-TYPE    226    235    188
D94V7, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            1            226
  CLUS_2            0            235
  CLUS_3            4            188
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UBR3 MUTATED        1      0      4
  UBR3 WILD-TYPE    195    190    264
D94V8, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            0            190
  CLUS_3            4            264
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UBR3 MUTATED        0      0      3      1
  UBR3 WILD-TYPE    136    107    180     82
D94V9, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            0            136
  CLUS_2            0            107
  CLUS_3            3            180
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UBR3 MUTATED        2      2      0
  UBR3 WILD-TYPE    220    182    103
D94V10, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            2            220
  CLUS_2            2            182
  CLUS_3            0            103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UBR3 MUTATED        0      2      2
  UBR3 WILD-TYPE    184    160    157
D94V11, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            0            184
  CLUS_2            2            160
  CLUS_3            2            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UBR3 MUTATED        0      2      2      0
  UBR3 WILD-TYPE     90    136    186     89
D94V12, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            2            136
  CLUS_3            2            186
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(95) Variable = CNOT1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT1 MUTATED        0      0      0      1
  CNOT1 WILD-TYPE     69     43     74     53
D95V1, multiclass
[1] "Remove cluster labels:" "CNOT1 MUTATED"         
clus
  CNOT1 MUTATED CNOT1 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT1 MUTATED        0      1      0      0
  CNOT1 WILD-TYPE     63     49     48     79
D95V2, multiclass
[1] "Remove cluster labels:" "CNOT1 MUTATED"         
clus
  CNOT1 MUTATED CNOT1 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT1 MUTATED        0      1      0      0
  CNOT1 WILD-TYPE     77     92     45     60
D95V3, multiclass
[1] "Remove cluster labels:" "CNOT1 MUTATED"         
clus
  CNOT1 MUTATED CNOT1 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT1 MUTATED        0      0      1
  CNOT1 WILD-TYPE    138     61     75
D95V4, multiclass
[1] "Remove cluster labels:" "CNOT1 MUTATED"         
clus
  CNOT1 MUTATED CNOT1 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT1 MUTATED        1      7      0
  CNOT1 WILD-TYPE    294    474      7
D95V5, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             1             294
  CLUS_2             7             474
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT1 MUTATED        1      4      0      2
  CNOT1 WILD-TYPE    159    228     64    164
D95V6, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             1             159
  CLUS_2             4             228
  CLUS_3             0              64
  CLUS_4             2             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT1 MUTATED        3      2      3
  CNOT1 WILD-TYPE    224    233    189
D95V7, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             3             224
  CLUS_2             2             233
  CLUS_3             3             189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT1 MUTATED        0      5      3
  CNOT1 WILD-TYPE    196    185    265
D95V8, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             0             196
  CLUS_2             5             185
  CLUS_3             3             265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT1 MUTATED        2      2      3      0
  CNOT1 WILD-TYPE    134    105    180     83
D95V9, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             2             134
  CLUS_2             2             105
  CLUS_3             3             180
  CLUS_4             0              83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT1 MUTATED        2      3      2
  CNOT1 WILD-TYPE    220    181    101
D95V10, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             2             220
  CLUS_2             3             181
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT1 MUTATED        2      2      3
  CNOT1 WILD-TYPE    182    160    156
D95V11, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             2             182
  CLUS_2             2             160
  CLUS_3             3             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT1 MUTATED        1      3      3      0
  CNOT1 WILD-TYPE     89    135    185     89
D95V12, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             1              89
  CLUS_2             3             135
  CLUS_3             3             185
  CLUS_4             0              89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(96) Variable = ESR2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESR2 MUTATED        0      0      2      1
  ESR2 WILD-TYPE     69     43     72     53
D96V1, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            0             69
  CLUS_2            0             43
  CLUS_3            2             72
  CLUS_4            1             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESR2 MUTATED        0      1      1      1
  ESR2 WILD-TYPE     63     49     47     78
D96V2, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            0             63
  CLUS_2            1             49
  CLUS_3            1             47
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESR2 MUTATED        1      1      1      0
  ESR2 WILD-TYPE     76     92     44     60
D96V3, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            1             76
  CLUS_2            1             92
  CLUS_3            1             44
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ESR2 MUTATED        3      0      0
  ESR2 WILD-TYPE    135     61     76
D96V4, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            3            135
  CLUS_2            0             61
  CLUS_3            0             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ESR2 MUTATED        2      3      0
  ESR2 WILD-TYPE    293    478      7
D96V5, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            2            293
  CLUS_2            3            478
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESR2 MUTATED        2      1      0      1
  ESR2 WILD-TYPE    158    231     64    165
D96V6, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            2            158
  CLUS_2            1            231
  CLUS_3            0             64
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ESR2 MUTATED        2      2      0
  ESR2 WILD-TYPE    225    233    192
D96V7, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            2            225
  CLUS_2            2            233
  CLUS_3            0            192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ESR2 MUTATED        1      2      1
  ESR2 WILD-TYPE    195    188    267
D96V8, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            2            188
  CLUS_3            1            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESR2 MUTATED        1      2      0      0
  ESR2 WILD-TYPE    135    105    183     83
D96V9, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            1            135
  CLUS_2            2            105
  CLUS_3            0            183
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ESR2 MUTATED        2      0      1
  ESR2 WILD-TYPE    220    184    102
D96V10, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            2            220
  CLUS_2            0            184
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ESR2 MUTATED        1      1      1
  ESR2 WILD-TYPE    183    161    158
D96V11, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            1            183
  CLUS_2            1            161
  CLUS_3            1            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESR2 MUTATED        0      1      2      0
  ESR2 WILD-TYPE     90    137    186     89
D96V12, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            1            137
  CLUS_3            2            186
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(97) Variable = TNFRSF9 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        0      0      1      0
  TNFRSF9 WILD-TYPE     69     43     73     54
D97V1, multiclass
[1] "Remove cluster labels:" "TNFRSF9 MUTATED"       
clus
  TNFRSF9 MUTATED TNFRSF9 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1825 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-1829        TCGA-14-2554        TCGA-14-3476        TCGA-14-4157 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-15-0742        TCGA-15-1444        TCGA-16-0846        TCGA-16-0861 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-16-1045        TCGA-16-1048        TCGA-19-1390        TCGA-19-1790 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2619        TCGA-19-2620        TCGA-19-2623        TCGA-19-2624 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2625        TCGA-19-2629        TCGA-19-2631        TCGA-19-4068 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        0      0      1      0
  TNFRSF9 WILD-TYPE     63     50     47     79
D97V2, multiclass
[1] "Remove cluster labels:" "TNFRSF9 MUTATED"       
clus
  TNFRSF9 MUTATED TNFRSF9 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1825 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-1829        TCGA-14-2554        TCGA-14-3476        TCGA-14-4157 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-15-0742        TCGA-15-1444        TCGA-16-0846        TCGA-16-0861 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-16-1045        TCGA-16-1048        TCGA-19-1390        TCGA-19-1790 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2619        TCGA-19-2620        TCGA-19-2623        TCGA-19-2624 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2625        TCGA-19-2629        TCGA-19-2631        TCGA-19-4068 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        1      0      0      0
  TNFRSF9 WILD-TYPE     76     93     45     60
D97V3, multiclass
[1] "Remove cluster labels:" "TNFRSF9 MUTATED"       
clus
  TNFRSF9 MUTATED TNFRSF9 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5953 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        0      0      1
  TNFRSF9 WILD-TYPE    138     61     75
D97V4, multiclass
[1] "Remove cluster labels:" "TNFRSF9 MUTATED"       
clus
  TNFRSF9 MUTATED TNFRSF9 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5953 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        2      2      0
  TNFRSF9 WILD-TYPE    293    479      7
D97V5, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               2               293
  CLUS_2               2               479
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        1      1      2      0
  TNFRSF9 WILD-TYPE    159    231     62    166
D97V6, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1               159
  CLUS_2               1               231
  CLUS_3               2                62
  CLUS_4               0               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        1      1      1
  TNFRSF9 WILD-TYPE    226    234    191
D97V7, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1               226
  CLUS_2               1               234
  CLUS_3               1               191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        1      1      1
  TNFRSF9 WILD-TYPE    195    189    267
D97V8, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1               195
  CLUS_2               1               189
  CLUS_3               1               267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        2      0      1      0
  TNFRSF9 WILD-TYPE    134    107    182     83
D97V9, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               2               134
  CLUS_2               0               107
  CLUS_3               1               182
  CLUS_4               0                83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        1      1      1
  TNFRSF9 WILD-TYPE    221    183    102
D97V10, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1               221
  CLUS_2               1               183
  CLUS_3               1               102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        2      0      1
  TNFRSF9 WILD-TYPE    182    162    158
D97V11, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               2               182
  CLUS_2               0               162
  CLUS_3               1               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        0      0      2      1
  TNFRSF9 WILD-TYPE     90    138    186     88
D97V12, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               0                90
  CLUS_2               0               138
  CLUS_3               2               186
  CLUS_4               1                88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(98) Variable = USP11 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP11 MUTATED        0      2      0      1
  USP11 WILD-TYPE     69     41     74     53
D98V1, multiclass
        clus
vv       USP11 MUTATED USP11 WILD-TYPE
  CLUS_1             0              69
  CLUS_2             2              41
  CLUS_3             0              74
  CLUS_4             1              53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP11 MUTATED        0      2      0      1
  USP11 WILD-TYPE     63     48     48     78
D98V2, multiclass
        clus
vv       USP11 MUTATED USP11 WILD-TYPE
  CLUS_1             0              63
  CLUS_2             2              48
  CLUS_3             0              48
  CLUS_4             1              78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP11 MUTATED        0      0      2      1
  USP11 WILD-TYPE     77     93     43     59
D98V3, multiclass
        clus
vv       USP11 MUTATED USP11 WILD-TYPE
  CLUS_1             0              77
  CLUS_2             0              93
  CLUS_3             2              43
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP11 MUTATED        2      1      0
  USP11 WILD-TYPE    136     60     76
D98V4, multiclass
        clus
vv       USP11 MUTATED USP11 WILD-TYPE
  CLUS_1             2             136
  CLUS_2             1              60
  CLUS_3             0              76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP11 MUTATED        3      7      0
  USP11 WILD-TYPE    292    474      7
D98V5, multiclass
        clus
vv       USP11 MUTATED USP11 WILD-TYPE
  CLUS_1             3             292
  CLUS_2             7             474
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP11 MUTATED        1      2      1      3
  USP11 WILD-TYPE    159    230     63    163
D98V6, multiclass
        clus
vv       USP11 MUTATED USP11 WILD-TYPE
  CLUS_1             1             159
  CLUS_2             2             230
  CLUS_3             1              63
  CLUS_4             3             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP11 MUTATED        3      0      6
  USP11 WILD-TYPE    224    235    186
D98V7, multiclass
        clus
vv       USP11 MUTATED USP11 WILD-TYPE
  CLUS_1             3             224
  CLUS_2             0             235
  CLUS_3             6             186
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP11 MUTATED        2      1      6
  USP11 WILD-TYPE    194    189    262
D98V8, multiclass
        clus
vv       USP11 MUTATED USP11 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             1             189
  CLUS_3             6             262
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP11 MUTATED        0      1      5      1
  USP11 WILD-TYPE    136    106    178     82
D98V9, multiclass
        clus
vv       USP11 MUTATED USP11 WILD-TYPE
  CLUS_1             0             136
  CLUS_2             1             106
  CLUS_3             5             178
  CLUS_4             1              82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP11 MUTATED        0      6      1
  USP11 WILD-TYPE    222    178    102
D98V10, multiclass
        clus
vv       USP11 MUTATED USP11 WILD-TYPE
  CLUS_1             0             222
  CLUS_2             6             178
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP11 MUTATED        0      3      4
  USP11 WILD-TYPE    184    159    155
D98V11, multiclass
        clus
vv       USP11 MUTATED USP11 WILD-TYPE
  CLUS_1             0             184
  CLUS_2             3             159
  CLUS_3             4             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP11 MUTATED        0      0      7      0
  USP11 WILD-TYPE     90    138    181     89
D98V12, multiclass
        clus
vv       USP11 MUTATED USP11 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             0             138
  CLUS_3             7             181
  CLUS_4             0              89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(99) Variable = CYP11A1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP11A1 MUTATED        1      0      2      0
  CYP11A1 WILD-TYPE     68     43     72     54
D99V1, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               1                68
  CLUS_2               0                43
  CLUS_3               2                72
  CLUS_4               0                54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP11A1 MUTATED        1      0      1      1
  CYP11A1 WILD-TYPE     62     50     47     78
D99V2, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               1                62
  CLUS_2               0                50
  CLUS_3               1                47
  CLUS_4               1                78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP11A1 MUTATED        1      2      0      0
  CYP11A1 WILD-TYPE     76     91     45     60
D99V3, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               1                76
  CLUS_2               2                91
  CLUS_3               0                45
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP11A1 MUTATED        1      0      2
  CYP11A1 WILD-TYPE    137     61     74
D99V4, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               1               137
  CLUS_2               0                61
  CLUS_3               2                74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP11A1 MUTATED        3      4      0
  CYP11A1 WILD-TYPE    292    477      7
D99V5, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               3               292
  CLUS_2               4               477
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP11A1 MUTATED        1      1      1      2
  CYP11A1 WILD-TYPE    159    231     63    164
D99V6, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               1               159
  CLUS_2               1               231
  CLUS_3               1                63
  CLUS_4               2               164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP11A1 MUTATED        5      0      2
  CYP11A1 WILD-TYPE    222    235    190
D99V7, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               5               222
  CLUS_2               0               235
  CLUS_3               2               190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP11A1 MUTATED        4      1      2
  CYP11A1 WILD-TYPE    192    189    266
D99V8, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               4               192
  CLUS_2               1               189
  CLUS_3               2               266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP11A1 MUTATED        1      1      1      1
  CYP11A1 WILD-TYPE    135    106    182     82
D99V9, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               1               135
  CLUS_2               1               106
  CLUS_3               1               182
  CLUS_4               1                82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP11A1 MUTATED        1      2      1
  CYP11A1 WILD-TYPE    221    182    102
D99V10, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               1               221
  CLUS_2               2               182
  CLUS_3               1               102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP11A1 MUTATED        1      2      1
  CYP11A1 WILD-TYPE    183    160    158
D99V11, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               1               183
  CLUS_2               2               160
  CLUS_3               1               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP11A1 MUTATED        0      0      2      2
  CYP11A1 WILD-TYPE     90    138    186     87
D99V12, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               0                90
  CLUS_2               0               138
  CLUS_3               2               186
  CLUS_4               2                87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(100) Variable = NCAPH2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NCAPH2 MUTATED        0      1      0      1
  NCAPH2 WILD-TYPE     69     42     74     53
D100V1, multiclass
[1] "Remove cluster labels:" "NCAPH2 MUTATED"        
clus
  NCAPH2 MUTATED NCAPH2 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-1045       TCGA-16-1048 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5954       TCGA-19-5955 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NCAPH2 MUTATED        0      0      0      2
  NCAPH2 WILD-TYPE     63     50     48     77
D100V2, multiclass
[1] "Remove cluster labels:" "NCAPH2 MUTATED"        
clus
  NCAPH2 MUTATED NCAPH2 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-1045       TCGA-16-1048 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5954       TCGA-19-5955 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NCAPH2 MUTATED        1      0      1      0
  NCAPH2 WILD-TYPE     76     93     44     60
D100V3, multiclass
[1] "Remove cluster labels:" "NCAPH2 MUTATED"        
clus
  NCAPH2 MUTATED NCAPH2 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5859       TCGA-06-6388 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-1045       TCGA-16-1048       TCGA-19-1390 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-1790       TCGA-19-2619       TCGA-19-2620       TCGA-19-2623 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-2624       TCGA-19-2625       TCGA-19-2629       TCGA-19-2631 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-4068       TCGA-19-5947       TCGA-19-5950       TCGA-19-5951 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-5952       TCGA-19-5953       TCGA-19-5954       TCGA-19-5955 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-87-5896 
"NCAPH2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NCAPH2 MUTATED        1      0      1
  NCAPH2 WILD-TYPE    137     61     75
D100V4, multiclass
[1] "Remove cluster labels:" "NCAPH2 MUTATED"        
clus
  NCAPH2 MUTATED NCAPH2 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5859       TCGA-06-6388 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-1045       TCGA-16-1048       TCGA-19-1390 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-1790       TCGA-19-2619       TCGA-19-2620       TCGA-19-2623 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-2624       TCGA-19-2625       TCGA-19-2629       TCGA-19-2631 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-4068       TCGA-19-5947       TCGA-19-5950       TCGA-19-5951 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-5952       TCGA-19-5953       TCGA-19-5954       TCGA-19-5955 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-87-5896 
"NCAPH2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NCAPH2 MUTATED        1      3      0
  NCAPH2 WILD-TYPE    294    478      7
D100V5, multiclass
        clus
vv       NCAPH2 MUTATED NCAPH2 WILD-TYPE
  CLUS_1              1              294
  CLUS_2              3              478
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NCAPH2 MUTATED        2      0      0      1
  NCAPH2 WILD-TYPE    158    232     64    165
D100V6, multiclass
        clus
vv       NCAPH2 MUTATED NCAPH2 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              0              232
  CLUS_3              0               64
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NCAPH2 MUTATED        2      0      1
  NCAPH2 WILD-TYPE    225    235    191
D100V7, multiclass
        clus
vv       NCAPH2 MUTATED NCAPH2 WILD-TYPE
  CLUS_1              2              225
  CLUS_2              0              235
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NCAPH2 MUTATED        1      1      1
  NCAPH2 WILD-TYPE    195    189    267
D100V8, multiclass
        clus
vv       NCAPH2 MUTATED NCAPH2 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              1              189
  CLUS_3              1              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NCAPH2 MUTATED        0      1      1      0
  NCAPH2 WILD-TYPE    136    106    182     83
D100V9, multiclass
[1] "Remove cluster labels:" "NCAPH2 MUTATED"        
clus
  NCAPH2 MUTATED NCAPH2 WILD-TYPE 
               2              507 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NCAPH2 MUTATED        0      1      1
  NCAPH2 WILD-TYPE    222    183    102
D100V10, multiclass
[1] "Remove cluster labels:" "NCAPH2 MUTATED"        
clus
  NCAPH2 MUTATED NCAPH2 WILD-TYPE 
               2              507 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NCAPH2 MUTATED        0      0      2
  NCAPH2 WILD-TYPE    184    162    157
D100V11, multiclass
[1] "Remove cluster labels:" "NCAPH2 MUTATED"        
clus
  NCAPH2 MUTATED NCAPH2 WILD-TYPE 
               2              503 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393       TCGA-DU-6394 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5965 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495       TCGA-HW-8319 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NCAPH2 MUTATED        0      0      2      0
  NCAPH2 WILD-TYPE     90    138    186     89
D100V12, multiclass
[1] "Remove cluster labels:" "NCAPH2 MUTATED"        
clus
  NCAPH2 MUTATED NCAPH2 WILD-TYPE 
               2              503 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393       TCGA-DU-6394 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5965 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495       TCGA-HW-8319 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" "NCAPH2 WILD-TYPE" 

Clustering(101) Variable = PRB3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRB3 MUTATED        0      0      0      1
  PRB3 WILD-TYPE     69     43     74     53
D101V1, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRB3 MUTATED        0      0      0      1
  PRB3 WILD-TYPE     63     50     48     78
D101V2, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRB3 MUTATED        0      0      1      0
  PRB3 WILD-TYPE     77     93     44     60
D101V3, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5412     TCGA-06-5413 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRB3 MUTATED        1      0      0
  PRB3 WILD-TYPE    137     61     76
D101V4, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5412     TCGA-06-5413 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRB3 MUTATED        1      2      0
  PRB3 WILD-TYPE    294    479      7
D101V5, multiclass
        clus
vv       PRB3 MUTATED PRB3 WILD-TYPE
  CLUS_1            1            294
  CLUS_2            2            479
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRB3 MUTATED        1      1      1      0
  PRB3 WILD-TYPE    159    231     63    166
D101V6, multiclass
        clus
vv       PRB3 MUTATED PRB3 WILD-TYPE
  CLUS_1            1            159
  CLUS_2            1            231
  CLUS_3            1             63
  CLUS_4            0            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRB3 MUTATED        2      0      1
  PRB3 WILD-TYPE    225    235    191
D101V7, multiclass
        clus
vv       PRB3 MUTATED PRB3 WILD-TYPE
  CLUS_1            2            225
  CLUS_2            0            235
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRB3 MUTATED        1      1      1
  PRB3 WILD-TYPE    195    189    267
D101V8, multiclass
        clus
vv       PRB3 MUTATED PRB3 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            1            189
  CLUS_3            1            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRB3 MUTATED        1      1      0      0
  PRB3 WILD-TYPE    135    106    183     83
D101V9, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             2            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7008     TCGA-DU-7009 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KL     TCGA-HW-A5KM 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRB3 MUTATED        0      0      2
  PRB3 WILD-TYPE    222    184    101
D101V10, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             2            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7008     TCGA-DU-7009 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KL     TCGA-HW-A5KM 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRB3 MUTATED        2      0      0
  PRB3 WILD-TYPE    182    162    159
D101V11, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             2            503 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRB3 MUTATED        0      0      0      2
  PRB3 WILD-TYPE     90    138    188     87
D101V12, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             2            503 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 

Clustering(102) Variable = TRPV6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPV6 MUTATED        0      2      2      2
  TRPV6 WILD-TYPE     69     41     72     52
D102V1, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             0              69
  CLUS_2             2              41
  CLUS_3             2              72
  CLUS_4             2              52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPV6 MUTATED        0      3      1      2
  TRPV6 WILD-TYPE     63     47     47     77
D102V2, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             0              63
  CLUS_2             3              47
  CLUS_3             1              47
  CLUS_4             2              77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPV6 MUTATED        0      4      2      1
  TRPV6 WILD-TYPE     77     89     43     59
D102V3, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             0              77
  CLUS_2             4              89
  CLUS_3             2              43
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPV6 MUTATED        4      1      2
  TRPV6 WILD-TYPE    134     60     74
D102V4, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             4             134
  CLUS_2             1              60
  CLUS_3             2              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPV6 MUTATED        6      6      0
  TRPV6 WILD-TYPE    289    475      7
D102V5, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             6             289
  CLUS_2             6             475
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPV6 MUTATED        3      2      0      2
  TRPV6 WILD-TYPE    157    230     64    164
D102V6, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             3             157
  CLUS_2             2             230
  CLUS_3             0              64
  CLUS_4             2             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPV6 MUTATED        7      1      3
  TRPV6 WILD-TYPE    220    234    189
D102V7, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             7             220
  CLUS_2             1             234
  CLUS_3             3             189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPV6 MUTATED        5      3      3
  TRPV6 WILD-TYPE    191    187    265
D102V8, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             5             191
  CLUS_2             3             187
  CLUS_3             3             265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPV6 MUTATED        1      2      3      0
  TRPV6 WILD-TYPE    135    105    180     83
D102V9, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             1             135
  CLUS_2             2             105
  CLUS_3             3             180
  CLUS_4             0              83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPV6 MUTATED        3      1      2
  TRPV6 WILD-TYPE    219    183    101
D102V10, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             3             219
  CLUS_2             1             183
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPV6 MUTATED        2      1      3
  TRPV6 WILD-TYPE    182    161    156
D102V11, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             2             182
  CLUS_2             1             161
  CLUS_3             3             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPV6 MUTATED        0      1      4      1
  TRPV6 WILD-TYPE     90    137    184     88
D102V12, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             1             137
  CLUS_3             4             184
  CLUS_4             1              88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(103) Variable = AOX1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AOX1 MUTATED        0      1      1      2
  AOX1 WILD-TYPE     69     42     73     52
D103V1, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            0             69
  CLUS_2            1             42
  CLUS_3            1             73
  CLUS_4            2             52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AOX1 MUTATED        0      2      0      2
  AOX1 WILD-TYPE     63     48     48     77
D103V2, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            0             63
  CLUS_2            2             48
  CLUS_3            0             48
  CLUS_4            2             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AOX1 MUTATED        0      2      2      0
  AOX1 WILD-TYPE     77     91     43     60
D103V3, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            0             77
  CLUS_2            2             91
  CLUS_3            2             43
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AOX1 MUTATED        4      0      0
  AOX1 WILD-TYPE    134     61     76
D103V4, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            4            134
  CLUS_2            0             61
  CLUS_3            0             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AOX1 MUTATED        5      3      0
  AOX1 WILD-TYPE    290    478      7
D103V5, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            5            290
  CLUS_2            3            478
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AOX1 MUTATED        2      2      0      0
  AOX1 WILD-TYPE    158    230     64    166
D103V6, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            2            158
  CLUS_2            2            230
  CLUS_3            0             64
  CLUS_4            0            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AOX1 MUTATED        6      1      1
  AOX1 WILD-TYPE    221    234    191
D103V7, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            6            221
  CLUS_2            1            234
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AOX1 MUTATED        5      2      1
  AOX1 WILD-TYPE    191    188    267
D103V8, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            5            191
  CLUS_2            2            188
  CLUS_3            1            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AOX1 MUTATED        1      3      0      0
  AOX1 WILD-TYPE    135    104    183     83
D103V9, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            1            135
  CLUS_2            3            104
  CLUS_3            0            183
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AOX1 MUTATED        1      0      3
  AOX1 WILD-TYPE    221    184    100
D103V10, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            1            221
  CLUS_2            0            184
  CLUS_3            3            100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AOX1 MUTATED        3      0      1
  AOX1 WILD-TYPE    181    162    158
D103V11, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            3            181
  CLUS_2            0            162
  CLUS_3            1            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AOX1 MUTATED        0      1      2      1
  AOX1 WILD-TYPE     90    137    186     88
D103V12, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            1            137
  CLUS_3            2            186
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(104) Variable = EEF1A1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF1A1 MUTATED        1      0      3      0
  EEF1A1 WILD-TYPE     68     43     71     54
D104V1, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              1               68
  CLUS_2              0               43
  CLUS_3              3               71
  CLUS_4              0               54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF1A1 MUTATED        0      0      2      2
  EEF1A1 WILD-TYPE     63     50     46     77
D104V2, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              0               63
  CLUS_2              0               50
  CLUS_3              2               46
  CLUS_4              2               77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF1A1 MUTATED        0      2      1      1
  EEF1A1 WILD-TYPE     77     91     44     59
D104V3, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              0               77
  CLUS_2              2               91
  CLUS_3              1               44
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EEF1A1 MUTATED        1      1      2
  EEF1A1 WILD-TYPE    137     60     74
D104V4, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              1              137
  CLUS_2              1               60
  CLUS_3              2               74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EEF1A1 MUTATED        6      2      0
  EEF1A1 WILD-TYPE    289    479      7
D104V5, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              6              289
  CLUS_2              2              479
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF1A1 MUTATED        3      1      0      1
  EEF1A1 WILD-TYPE    157    231     64    165
D104V6, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              3              157
  CLUS_2              1              231
  CLUS_3              0               64
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EEF1A1 MUTATED        4      2      0
  EEF1A1 WILD-TYPE    223    233    192
D104V7, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              4              223
  CLUS_2              2              233
  CLUS_3              0              192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EEF1A1 MUTATED        3      2      1
  EEF1A1 WILD-TYPE    193    188    267
D104V8, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              3              193
  CLUS_2              2              188
  CLUS_3              1              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF1A1 MUTATED        0      3      0      1
  EEF1A1 WILD-TYPE    136    104    183     82
D104V9, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              0              136
  CLUS_2              3              104
  CLUS_3              0              183
  CLUS_4              1               82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EEF1A1 MUTATED        2      0      2
  EEF1A1 WILD-TYPE    220    184    101
D104V10, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              2              220
  CLUS_2              0              184
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EEF1A1 MUTATED        2      1      1
  EEF1A1 WILD-TYPE    182    161    158
D104V11, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              2              182
  CLUS_2              1              161
  CLUS_3              1              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF1A1 MUTATED        1      1      1      1
  EEF1A1 WILD-TYPE     89    137    187     88
D104V12, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              1               89
  CLUS_2              1              137
  CLUS_3              1              187
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(105) Variable = ZZZ3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZZZ3 MUTATED        0      0      1      0
  ZZZ3 WILD-TYPE     69     43     73     54
D105V1, multiclass
[1] "Remove cluster labels:" "ZZZ3 MUTATED"          
clus
  ZZZ3 MUTATED ZZZ3 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZZZ3 MUTATED        0      0      1      0
  ZZZ3 WILD-TYPE     63     50     47     79
D105V2, multiclass
[1] "Remove cluster labels:" "ZZZ3 MUTATED"          
clus
  ZZZ3 MUTATED ZZZ3 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZZZ3 MUTATED        0      0      0      1
  ZZZ3 WILD-TYPE     77     93     45     59
D105V3, multiclass
[1] "Remove cluster labels:" "ZZZ3 MUTATED"          
clus
  ZZZ3 MUTATED ZZZ3 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2564     TCGA-06-2565 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ZZZ3 MUTATED        1      0      0
  ZZZ3 WILD-TYPE    137     61     76
D105V4, multiclass
[1] "Remove cluster labels:" "ZZZ3 MUTATED"          
clus
  ZZZ3 MUTATED ZZZ3 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2564     TCGA-06-2565 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"ZZZ3 WILD-TYPE" "ZZZ3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ZZZ3 MUTATED        1      3      0
  ZZZ3 WILD-TYPE    294    478      7
D105V5, multiclass
        clus
vv       ZZZ3 MUTATED ZZZ3 WILD-TYPE
  CLUS_1            1            294
  CLUS_2            3            478
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZZZ3 MUTATED        1      2      0      0
  ZZZ3 WILD-TYPE    159    230     64    166
D105V6, multiclass
        clus
vv       ZZZ3 MUTATED ZZZ3 WILD-TYPE
  CLUS_1            1            159
  CLUS_2            2            230
  CLUS_3            0             64
  CLUS_4            0            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ZZZ3 MUTATED        2      2      0
  ZZZ3 WILD-TYPE    225    233    192
D105V7, multiclass
        clus
vv       ZZZ3 MUTATED ZZZ3 WILD-TYPE
  CLUS_1            2            225
  CLUS_2            2            233
  CLUS_3            0            192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ZZZ3 MUTATED        1      3      0
  ZZZ3 WILD-TYPE    195    187    268
D105V8, multiclass
        clus
vv       ZZZ3 MUTATED ZZZ3 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            3            187
  CLUS_3            0            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZZZ3 MUTATED        1      1      0      1
  ZZZ3 WILD-TYPE    135    106    183     82
D105V9, multiclass
        clus
vv       ZZZ3 MUTATED ZZZ3 WILD-TYPE
  CLUS_1            1            135
  CLUS_2            1            106
  CLUS_3            0            183
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ZZZ3 MUTATED        2      0      1
  ZZZ3 WILD-TYPE    220    184    102
D105V10, multiclass
        clus
vv       ZZZ3 MUTATED ZZZ3 WILD-TYPE
  CLUS_1            2            220
  CLUS_2            0            184
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ZZZ3 MUTATED        2      0      1
  ZZZ3 WILD-TYPE    182    162    158
D105V11, multiclass
        clus
vv       ZZZ3 MUTATED ZZZ3 WILD-TYPE
  CLUS_1            2            182
  CLUS_2            0            162
  CLUS_3            1            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZZZ3 MUTATED        1      1      1      0
  ZZZ3 WILD-TYPE     89    137    187     89
D105V12, multiclass
        clus
vv       ZZZ3 MUTATED ZZZ3 WILD-TYPE
  CLUS_1            1             89
  CLUS_2            1            137
  CLUS_3            1            187
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(106) Variable = PAK1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAK1 MUTATED        0      0      0      0
  PAK1 WILD-TYPE     69     43     74     54
D106V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAK1 MUTATED        0      0      0      0
  PAK1 WILD-TYPE     63     50     48     79
D106V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAK1 MUTATED        1      0      0      0
  PAK1 WILD-TYPE     76     93     45     60
D106V3, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-26-5139     TCGA-26-6173     TCGA-26-6174     TCGA-27-1830 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2502     TCGA-28-2509 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-41-6646     TCGA-74-6573 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-74-6575     TCGA-74-6577     TCGA-74-6578     TCGA-74-6584 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4925     TCGA-76-4926     TCGA-76-4927     TCGA-76-4928 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4929     TCGA-76-4931     TCGA-76-4932     TCGA-76-4934 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4935     TCGA-76-6191     TCGA-76-6192     TCGA-76-6193 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-6280     TCGA-76-6282     TCGA-76-6283     TCGA-76-6285 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-6286     TCGA-76-6656     TCGA-76-6657     TCGA-76-6660 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-6661     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAK1 MUTATED        1      0      0
  PAK1 WILD-TYPE    137     61     76
D106V4, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-26-5139     TCGA-26-6173     TCGA-26-6174     TCGA-27-1830 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2502     TCGA-28-2509 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-41-6646     TCGA-74-6573 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-74-6575     TCGA-74-6577     TCGA-74-6578     TCGA-74-6584 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4925     TCGA-76-4926     TCGA-76-4927     TCGA-76-4928 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4929     TCGA-76-4931     TCGA-76-4932     TCGA-76-4934 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4935     TCGA-76-6191     TCGA-76-6192     TCGA-76-6193 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-6280     TCGA-76-6282     TCGA-76-6283     TCGA-76-6285 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-6286     TCGA-76-6656     TCGA-76-6657     TCGA-76-6660 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-6661     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAK1 MUTATED        1      2      0
  PAK1 WILD-TYPE    294    479      7
D106V5, multiclass
        clus
vv       PAK1 MUTATED PAK1 WILD-TYPE
  CLUS_1            1            294
  CLUS_2            2            479
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAK1 MUTATED        2      1      0      0
  PAK1 WILD-TYPE    158    231     64    166
D106V6, multiclass
        clus
vv       PAK1 MUTATED PAK1 WILD-TYPE
  CLUS_1            2            158
  CLUS_2            1            231
  CLUS_3            0             64
  CLUS_4            0            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAK1 MUTATED        1      1      0
  PAK1 WILD-TYPE    226    234    192
D106V7, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             2            652 
    TCGA-02-0047     TCGA-02-0055     TCGA-02-2483     TCGA-02-2485 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-02-2486     TCGA-06-0129     TCGA-06-0130     TCGA-06-0132 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0157     TCGA-06-0158     TCGA-06-0168 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0174     TCGA-06-0178     TCGA-06-0184     TCGA-06-0219 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0238     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0649     TCGA-06-0686     TCGA-06-0743     TCGA-06-0744 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0745     TCGA-06-0747     TCGA-06-0749     TCGA-06-0750 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0882     TCGA-06-1804     TCGA-06-2557 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-08-0386     TCGA-12-0616 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0821     TCGA-12-1597 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-5299     TCGA-14-0781     TCGA-14-0787     TCGA-14-0789 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0817     TCGA-14-1823     TCGA-14-1825 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-15-0742     TCGA-15-1444 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-1045     TCGA-19-1390     TCGA-19-2619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1834 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1837     TCGA-27-2519     TCGA-27-2521 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2528 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2499     TCGA-28-2509 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5213 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5220 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1980     TCGA-32-1982     TCGA-32-2615 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4213 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-3915 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4932     TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-4943     TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-5394     TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6670     TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5275     TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5279     TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A75M     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7874 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74J     TCGA-HT-A74K 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAK1 MUTATED        0      2      0
  PAK1 WILD-TYPE    196    188    268
D106V8, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             2            652 
    TCGA-02-0047     TCGA-02-0055     TCGA-02-2483     TCGA-02-2485 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-02-2486     TCGA-06-0129     TCGA-06-0130     TCGA-06-0132 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0157     TCGA-06-0158     TCGA-06-0168 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0174     TCGA-06-0178     TCGA-06-0184     TCGA-06-0219 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0238     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0649     TCGA-06-0686     TCGA-06-0743     TCGA-06-0744 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0745     TCGA-06-0747     TCGA-06-0749     TCGA-06-0750 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0882     TCGA-06-1804     TCGA-06-2557 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-08-0386     TCGA-12-0616 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0821     TCGA-12-1597 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-5299     TCGA-14-0781     TCGA-14-0787     TCGA-14-0789 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0817     TCGA-14-1823     TCGA-14-1825 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-15-0742     TCGA-15-1444 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-1045     TCGA-19-1390     TCGA-19-2619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1834 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1837     TCGA-27-2519     TCGA-27-2521 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2528 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2499     TCGA-28-2509 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5213 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5220 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1980     TCGA-32-1982     TCGA-32-2615 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4213 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-3915 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4932     TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-4943     TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-5394     TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6670     TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5275     TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5279     TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A75M     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7874 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74J     TCGA-HT-A74K 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAK1 MUTATED        0      2      0      0
  PAK1 WILD-TYPE    136    105    183     83
D106V9, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             2            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAK1 MUTATED        1      0      1
  PAK1 WILD-TYPE    221    184    102
D106V10, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             2            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAK1 MUTATED        1      0      1
  PAK1 WILD-TYPE    183    162    158
D106V11, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             2            503 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7874 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495     TCGA-HW-8319 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAK1 MUTATED        1      0      1      0
  PAK1 WILD-TYPE     89    138    187     89
D106V12, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             2            503 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7874 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495     TCGA-HW-8319 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 

Clustering(107) Variable = RASGRF2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASGRF2 MUTATED        1      0      1      0
  RASGRF2 WILD-TYPE     68     43     73     54
D107V1, multiclass
[1] "Remove cluster labels:" "RASGRF2 MUTATED"       
clus
  RASGRF2 MUTATED RASGRF2 WILD-TYPE 
                2               238 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5213        TCGA-28-5214        TCGA-28-5215        TCGA-28-5216 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5218        TCGA-28-5219        TCGA-28-5220        TCGA-28-6450 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1970        TCGA-32-1977        TCGA-32-1979        TCGA-32-1980 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1982        TCGA-32-1986        TCGA-32-1991        TCGA-32-2491 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-2494        TCGA-32-2495        TCGA-32-2615        TCGA-32-2632 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-2634        TCGA-32-2638        TCGA-32-4208        TCGA-32-4209 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-4210        TCGA-32-4211        TCGA-32-4213        TCGA-32-4719 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-5222        TCGA-41-2571        TCGA-41-2572        TCGA-41-2573 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-2575        TCGA-41-3392        TCGA-41-3393        TCGA-41-3915 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-4097        TCGA-41-5651        TCGA-76-4925        TCGA-76-4926 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6282        TCGA-76-6285 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-81-5910        TCGA-87-5896 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASGRF2 MUTATED        1      0      1      0
  RASGRF2 WILD-TYPE     62     50     47     79
D107V2, multiclass
[1] "Remove cluster labels:" "RASGRF2 MUTATED"       
clus
  RASGRF2 MUTATED RASGRF2 WILD-TYPE 
                2               238 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5213        TCGA-28-5214        TCGA-28-5215        TCGA-28-5216 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5218        TCGA-28-5219        TCGA-28-5220        TCGA-28-6450 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1970        TCGA-32-1977        TCGA-32-1979        TCGA-32-1980 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1982        TCGA-32-1986        TCGA-32-1991        TCGA-32-2491 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-2494        TCGA-32-2495        TCGA-32-2615        TCGA-32-2632 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-2634        TCGA-32-2638        TCGA-32-4208        TCGA-32-4209 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-4210        TCGA-32-4211        TCGA-32-4213        TCGA-32-4719 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-5222        TCGA-41-2571        TCGA-41-2572        TCGA-41-2573 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-2575        TCGA-41-3392        TCGA-41-3393        TCGA-41-3915 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-4097        TCGA-41-5651        TCGA-76-4925        TCGA-76-4926 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6282        TCGA-76-6285 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-81-5910        TCGA-87-5896 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASGRF2 MUTATED        2      0      0      0
  RASGRF2 WILD-TYPE     75     93     45     60
D107V3, multiclass
[1] "Remove cluster labels:" "RASGRF2 MUTATED"       
clus
  RASGRF2 MUTATED RASGRF2 WILD-TYPE 
                2               273 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5211        TCGA-28-5213        TCGA-28-5214 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5215        TCGA-28-5216        TCGA-28-5218        TCGA-28-5219 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5220        TCGA-28-6450        TCGA-32-1970        TCGA-32-1977 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-1982        TCGA-32-1986 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-2491        TCGA-32-2494        TCGA-32-2495 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-2615        TCGA-32-2632        TCGA-32-2634        TCGA-32-2638 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-4208        TCGA-32-4209        TCGA-32-4210        TCGA-32-4211 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-4213        TCGA-32-4719        TCGA-32-5222        TCGA-41-2571 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-2572        TCGA-41-2573        TCGA-41-2575        TCGA-41-3392 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-3393        TCGA-41-3915        TCGA-41-4097        TCGA-41-5651 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-6646        TCGA-74-6573        TCGA-74-6575        TCGA-74-6577 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-74-6578        TCGA-74-6584        TCGA-76-4925        TCGA-76-4926 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6280        TCGA-76-6282 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6283        TCGA-76-6285        TCGA-76-6286        TCGA-76-6656 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6657        TCGA-76-6660        TCGA-76-6661        TCGA-76-6662 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6663        TCGA-76-6664        TCGA-81-5910        TCGA-81-5911 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-87-5896 
"RASGRF2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RASGRF2 MUTATED        0      1      1
  RASGRF2 WILD-TYPE    138     60     75
D107V4, multiclass
[1] "Remove cluster labels:" "RASGRF2 MUTATED"       
clus
  RASGRF2 MUTATED RASGRF2 WILD-TYPE 
                2               273 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5211        TCGA-28-5213        TCGA-28-5214 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5215        TCGA-28-5216        TCGA-28-5218        TCGA-28-5219 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5220        TCGA-28-6450        TCGA-32-1970        TCGA-32-1977 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-1982        TCGA-32-1986 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-2491        TCGA-32-2494        TCGA-32-2495 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-2615        TCGA-32-2632        TCGA-32-2634        TCGA-32-2638 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-4208        TCGA-32-4209        TCGA-32-4210        TCGA-32-4211 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-4213        TCGA-32-4719        TCGA-32-5222        TCGA-41-2571 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-2572        TCGA-41-2573        TCGA-41-2575        TCGA-41-3392 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-3393        TCGA-41-3915        TCGA-41-4097        TCGA-41-5651 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-6646        TCGA-74-6573        TCGA-74-6575        TCGA-74-6577 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-74-6578        TCGA-74-6584        TCGA-76-4925        TCGA-76-4926 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6280        TCGA-76-6282 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6283        TCGA-76-6285        TCGA-76-6286        TCGA-76-6656 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6657        TCGA-76-6660        TCGA-76-6661        TCGA-76-6662 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6663        TCGA-76-6664        TCGA-81-5910        TCGA-81-5911 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-87-5896 
"RASGRF2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RASGRF2 MUTATED        3      3      0
  RASGRF2 WILD-TYPE    292    478      7
D107V5, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               3               292
  CLUS_2               3               478
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASGRF2 MUTATED        4      1      0      1
  RASGRF2 WILD-TYPE    156    231     64    165
D107V6, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               4               156
  CLUS_2               1               231
  CLUS_3               0                64
  CLUS_4               1               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RASGRF2 MUTATED        4      1      1
  RASGRF2 WILD-TYPE    223    234    191
D107V7, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               4               223
  CLUS_2               1               234
  CLUS_3               1               191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RASGRF2 MUTATED        3      1      2
  RASGRF2 WILD-TYPE    193    189    266
D107V8, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               3               193
  CLUS_2               1               189
  CLUS_3               2               266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASGRF2 MUTATED        0      3      1      0
  RASGRF2 WILD-TYPE    136    104    182     83
D107V9, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               0               136
  CLUS_2               3               104
  CLUS_3               1               182
  CLUS_4               0                83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RASGRF2 MUTATED        0      1      3
  RASGRF2 WILD-TYPE    222    183    100
D107V10, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               0               222
  CLUS_2               1               183
  CLUS_3               3               100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RASGRF2 MUTATED        1      2      1
  RASGRF2 WILD-TYPE    183    160    158
D107V11, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               1               183
  CLUS_2               2               160
  CLUS_3               1               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASGRF2 MUTATED        0      2      1      1
  RASGRF2 WILD-TYPE     90    136    187     88
D107V12, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               0                90
  CLUS_2               2               136
  CLUS_3               1               187
  CLUS_4               1                88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(108) Variable = WWC3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WWC3 MUTATED        1      0      1      0
  WWC3 WILD-TYPE     68     43     73     54
D108V1, multiclass
[1] "Remove cluster labels:" "WWC3 MUTATED"          
clus
  WWC3 MUTATED WWC3 WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2629 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5954     TCGA-19-5955 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-19-5958     TCGA-19-5959     TCGA-19-5960     TCGA-26-1439 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2501     TCGA-28-2502 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-28-2509     TCGA-28-2510     TCGA-28-2513     TCGA-28-2514 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-28-5204     TCGA-28-5207     TCGA-28-5208     TCGA-28-5209 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WWC3 MUTATED        0      0      0      2
  WWC3 WILD-TYPE     63     50     48     77
D108V2, multiclass
[1] "Remove cluster labels:" "WWC3 MUTATED"          
clus
  WWC3 MUTATED WWC3 WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2629 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5954     TCGA-19-5955 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-19-5958     TCGA-19-5959     TCGA-19-5960     TCGA-26-1439 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2501     TCGA-28-2502 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-28-2509     TCGA-28-2510     TCGA-28-2513     TCGA-28-2514 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-28-5204     TCGA-28-5207     TCGA-28-5208     TCGA-28-5209 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"WWC3 WILD-TYPE" "WWC3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WWC3 MUTATED        0      2      0      1
  WWC3 WILD-TYPE     77     91     45     59
D108V3, multiclass
        clus
vv       WWC3 MUTATED WWC3 WILD-TYPE
  CLUS_1            0             77
  CLUS_2            2             91
  CLUS_3            0             45
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WWC3 MUTATED        0      1      2
  WWC3 WILD-TYPE    138     60     74
D108V4, multiclass
        clus
vv       WWC3 MUTATED WWC3 WILD-TYPE
  CLUS_1            0            138
  CLUS_2            1             60
  CLUS_3            2             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WWC3 MUTATED        4      7      0
  WWC3 WILD-TYPE    291    474      7
D108V5, multiclass
        clus
vv       WWC3 MUTATED WWC3 WILD-TYPE
  CLUS_1            4            291
  CLUS_2            7            474
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WWC3 MUTATED        2      4      0      2
  WWC3 WILD-TYPE    158    228     64    164
D108V6, multiclass
        clus
vv       WWC3 MUTATED WWC3 WILD-TYPE
  CLUS_1            2            158
  CLUS_2            4            228
  CLUS_3            0             64
  CLUS_4            2            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WWC3 MUTATED        3      4      2
  WWC3 WILD-TYPE    224    231    190
D108V7, multiclass
        clus
vv       WWC3 MUTATED WWC3 WILD-TYPE
  CLUS_1            3            224
  CLUS_2            4            231
  CLUS_3            2            190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WWC3 MUTATED        2      4      3
  WWC3 WILD-TYPE    194    186    265
D108V8, multiclass
        clus
vv       WWC3 MUTATED WWC3 WILD-TYPE
  CLUS_1            2            194
  CLUS_2            4            186
  CLUS_3            3            265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WWC3 MUTATED        1      1      3      2
  WWC3 WILD-TYPE    135    106    180     81
D108V9, multiclass
        clus
vv       WWC3 MUTATED WWC3 WILD-TYPE
  CLUS_1            1            135
  CLUS_2            1            106
  CLUS_3            3            180
  CLUS_4            2             81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WWC3 MUTATED        3      3      1
  WWC3 WILD-TYPE    219    181    102
D108V10, multiclass
        clus
vv       WWC3 MUTATED WWC3 WILD-TYPE
  CLUS_1            3            219
  CLUS_2            3            181
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WWC3 MUTATED        2      2      3
  WWC3 WILD-TYPE    182    160    156
D108V11, multiclass
        clus
vv       WWC3 MUTATED WWC3 WILD-TYPE
  CLUS_1            2            182
  CLUS_2            2            160
  CLUS_3            3            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WWC3 MUTATED        3      1      3      0
  WWC3 WILD-TYPE     87    137    185     89
D108V12, multiclass
        clus
vv       WWC3 MUTATED WWC3 WILD-TYPE
  CLUS_1            3             87
  CLUS_2            1            137
  CLUS_3            3            185
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(109) Variable = TTC30B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC30B MUTATED        0      0      0      1
  TTC30B WILD-TYPE     69     43     74     53
D109V1, multiclass
[1] "Remove cluster labels:" "TTC30B MUTATED"        
clus
  TTC30B MUTATED TTC30B WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC30B MUTATED        0      1      0      0
  TTC30B WILD-TYPE     63     49     48     79
D109V2, multiclass
[1] "Remove cluster labels:" "TTC30B MUTATED"        
clus
  TTC30B MUTATED TTC30B WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC30B MUTATED        0      0      1      0
  TTC30B WILD-TYPE     77     93     44     60
D109V3, multiclass
[1] "Remove cluster labels:" "TTC30B MUTATED"        
clus
  TTC30B MUTATED TTC30B WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2559       TCGA-06-2561 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TTC30B MUTATED        1      0      0
  TTC30B WILD-TYPE    137     61     76
D109V4, multiclass
[1] "Remove cluster labels:" "TTC30B MUTATED"        
clus
  TTC30B MUTATED TTC30B WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2559       TCGA-06-2561 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TTC30B MUTATED        1      6      0
  TTC30B WILD-TYPE    294    475      7
D109V5, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              1              294
  CLUS_2              6              475
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC30B MUTATED        1      4      0      1
  TTC30B WILD-TYPE    159    228     64    165
D109V6, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              1              159
  CLUS_2              4              228
  CLUS_3              0               64
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TTC30B MUTATED        2      4      1
  TTC30B WILD-TYPE    225    231    191
D109V7, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              2              225
  CLUS_2              4              231
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TTC30B MUTATED        1      4      2
  TTC30B WILD-TYPE    195    186    266
D109V8, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              1              195
  CLUS_2              4              186
  CLUS_3              2              266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC30B MUTATED        1      4      1      0
  TTC30B WILD-TYPE    135    103    182     83
D109V9, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              1              135
  CLUS_2              4              103
  CLUS_3              1              182
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TTC30B MUTATED        4      1      1
  TTC30B WILD-TYPE    218    183    102
D109V10, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              4              218
  CLUS_2              1              183
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TTC30B MUTATED        1      2      3
  TTC30B WILD-TYPE    183    160    156
D109V11, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              1              183
  CLUS_2              2              160
  CLUS_3              3              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC30B MUTATED        0      3      3      0
  TTC30B WILD-TYPE     90    135    185     89
D109V12, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              0               90
  CLUS_2              3              135
  CLUS_3              3              185
  CLUS_4              0               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(110) Variable = ROBO3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ROBO3 MUTATED        0      0      0      0
  ROBO3 WILD-TYPE     69     43     74     54
D110V1, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ROBO3 MUTATED        0      0      0      0
  ROBO3 WILD-TYPE     63     50     48     79
D110V2, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ROBO3 MUTATED        0      0      0      0
  ROBO3 WILD-TYPE     77     93     45     60
D110V3, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ROBO3 MUTATED        0      0      0
  ROBO3 WILD-TYPE    138     61     76
D110V4, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ROBO3 MUTATED        0      5      0
  ROBO3 WILD-TYPE    295    476      7
D110V5, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             0             295
  CLUS_2             5             476
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ROBO3 MUTATED        0      3      0      2
  ROBO3 WILD-TYPE    160    229     64    164
D110V6, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             0             160
  CLUS_2             3             229
  CLUS_3             0              64
  CLUS_4             2             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ROBO3 MUTATED        0      3      2
  ROBO3 WILD-TYPE    227    232    190
D110V7, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             0             227
  CLUS_2             3             232
  CLUS_3             2             190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ROBO3 MUTATED        0      2      3
  ROBO3 WILD-TYPE    196    188    265
D110V8, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             0             196
  CLUS_2             2             188
  CLUS_3             3             265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ROBO3 MUTATED        1      0      2      2
  ROBO3 WILD-TYPE    135    107    181     81
D110V9, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             1             135
  CLUS_2             0             107
  CLUS_3             2             181
  CLUS_4             2              81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ROBO3 MUTATED        4      1      0
  ROBO3 WILD-TYPE    218    183    103
D110V10, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             4             218
  CLUS_2             1             183
  CLUS_3             0             103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ROBO3 MUTATED        2      2      1
  ROBO3 WILD-TYPE    182    160    158
D110V11, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             2             182
  CLUS_2             2             160
  CLUS_3             1             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ROBO3 MUTATED        1      2      2      0
  ROBO3 WILD-TYPE     89    136    186     89
D110V12, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             1              89
  CLUS_2             2             136
  CLUS_3             2             186
  CLUS_4             0              89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(111) Variable = SOX13 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX13 MUTATED        0      0      1      1
  SOX13 WILD-TYPE     69     43     73     53
D111V1, multiclass
[1] "Remove cluster labels:" "SOX13 MUTATED"         
clus
  SOX13 MUTATED SOX13 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-2491 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX13 MUTATED        0      0      1      1
  SOX13 WILD-TYPE     63     50     47     78
D111V2, multiclass
[1] "Remove cluster labels:" "SOX13 MUTATED"         
clus
  SOX13 MUTATED SOX13 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-2491 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX13 MUTATED        1      1      1      0
  SOX13 WILD-TYPE     76     92     44     60
D111V3, multiclass
        clus
vv       SOX13 MUTATED SOX13 WILD-TYPE
  CLUS_1             1              76
  CLUS_2             1              92
  CLUS_3             1              44
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOX13 MUTATED        2      0      1
  SOX13 WILD-TYPE    136     61     75
D111V4, multiclass
        clus
vv       SOX13 MUTATED SOX13 WILD-TYPE
  CLUS_1             2             136
  CLUS_2             0              61
  CLUS_3             1              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOX13 MUTATED        4      1      0
  SOX13 WILD-TYPE    291    480      7
D111V5, multiclass
        clus
vv       SOX13 MUTATED SOX13 WILD-TYPE
  CLUS_1             4             291
  CLUS_2             1             480
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX13 MUTATED        4      0      0      0
  SOX13 WILD-TYPE    156    232     64    166
D111V6, multiclass
        clus
vv       SOX13 MUTATED SOX13 WILD-TYPE
  CLUS_1             4             156
  CLUS_2             0             232
  CLUS_3             0              64
  CLUS_4             0             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOX13 MUTATED        2      0      1
  SOX13 WILD-TYPE    225    235    191
D111V7, multiclass
        clus
vv       SOX13 MUTATED SOX13 WILD-TYPE
  CLUS_1             2             225
  CLUS_2             0             235
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOX13 MUTATED        1      1      1
  SOX13 WILD-TYPE    195    189    267
D111V8, multiclass
        clus
vv       SOX13 MUTATED SOX13 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             1             189
  CLUS_3             1             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX13 MUTATED        0      2      0      0
  SOX13 WILD-TYPE    136    105    183     83
D111V9, multiclass
[1] "Remove cluster labels:" "SOX13 MUTATED"         
clus
  SOX13 MUTATED SOX13 WILD-TYPE 
              2             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TG 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOX13 MUTATED        0      0      2
  SOX13 WILD-TYPE    222    184    101
D111V10, multiclass
[1] "Remove cluster labels:" "SOX13 MUTATED"         
clus
  SOX13 MUTATED SOX13 WILD-TYPE 
              2             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TG 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOX13 MUTATED        1      0      1
  SOX13 WILD-TYPE    183    162    158
D111V11, multiclass
[1] "Remove cluster labels:" "SOX13 MUTATED"         
clus
  SOX13 MUTATED SOX13 WILD-TYPE 
              2             503 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TG      TCGA-DU-A7TJ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495      TCGA-HW-8319 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX13 MUTATED        0      0      1      1
  SOX13 WILD-TYPE     90    138    187     88
D111V12, multiclass
[1] "Remove cluster labels:" "SOX13 MUTATED"         
clus
  SOX13 MUTATED SOX13 WILD-TYPE 
              2             503 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TG      TCGA-DU-A7TJ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495      TCGA-HW-8319 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 

Clustering(112) Variable = ST3GAL6 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST3GAL6 MUTATED        1      0      1      0
  ST3GAL6 WILD-TYPE     68     43     73     54
D112V1, multiclass
[1] "Remove cluster labels:" "ST3GAL6 MUTATED"       
clus
  ST3GAL6 MUTATED ST3GAL6 WILD-TYPE 
                2               238 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-2557 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1831        TCGA-27-1832        TCGA-27-1833        TCGA-27-1834 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1835        TCGA-27-1836        TCGA-27-1837        TCGA-27-1838 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2518        TCGA-27-2519        TCGA-27-2521        TCGA-27-2523 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2524        TCGA-27-2526        TCGA-27-2527        TCGA-27-2528 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2501        TCGA-28-2502 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-2509        TCGA-28-2510        TCGA-28-2513        TCGA-28-2514 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5204        TCGA-28-5207        TCGA-28-5208        TCGA-28-5209 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5213        TCGA-28-5214        TCGA-28-5215        TCGA-28-5216 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5218        TCGA-28-5219        TCGA-28-5220        TCGA-28-6450 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1970        TCGA-32-1977        TCGA-32-1979        TCGA-32-1980 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1982        TCGA-32-1986        TCGA-32-1991        TCGA-32-2491 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-2494        TCGA-32-2495        TCGA-32-2615        TCGA-32-2632 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-2634        TCGA-32-2638        TCGA-32-4208        TCGA-32-4209 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-4210        TCGA-32-4211        TCGA-32-4213        TCGA-32-4719 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-5222        TCGA-41-2571        TCGA-41-2572        TCGA-41-2573 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-2575        TCGA-41-3392        TCGA-41-3393        TCGA-41-3915 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-4097        TCGA-41-5651        TCGA-76-4925        TCGA-76-4926 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6282        TCGA-76-6285 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-81-5910        TCGA-87-5896 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST3GAL6 MUTATED        0      0      1      1
  ST3GAL6 WILD-TYPE     63     50     47     78
D112V2, multiclass
[1] "Remove cluster labels:" "ST3GAL6 MUTATED"       
clus
  ST3GAL6 MUTATED ST3GAL6 WILD-TYPE 
                2               238 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-2557 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1831        TCGA-27-1832        TCGA-27-1833        TCGA-27-1834 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1835        TCGA-27-1836        TCGA-27-1837        TCGA-27-1838 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2518        TCGA-27-2519        TCGA-27-2521        TCGA-27-2523 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2524        TCGA-27-2526        TCGA-27-2527        TCGA-27-2528 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2501        TCGA-28-2502 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-2509        TCGA-28-2510        TCGA-28-2513        TCGA-28-2514 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5204        TCGA-28-5207        TCGA-28-5208        TCGA-28-5209 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5213        TCGA-28-5214        TCGA-28-5215        TCGA-28-5216 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5218        TCGA-28-5219        TCGA-28-5220        TCGA-28-6450 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1970        TCGA-32-1977        TCGA-32-1979        TCGA-32-1980 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1982        TCGA-32-1986        TCGA-32-1991        TCGA-32-2491 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-2494        TCGA-32-2495        TCGA-32-2615        TCGA-32-2632 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-2634        TCGA-32-2638        TCGA-32-4208        TCGA-32-4209 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-4210        TCGA-32-4211        TCGA-32-4213        TCGA-32-4719 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-5222        TCGA-41-2571        TCGA-41-2572        TCGA-41-2573 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-2575        TCGA-41-3392        TCGA-41-3393        TCGA-41-3915 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-4097        TCGA-41-5651        TCGA-76-4925        TCGA-76-4926 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6282        TCGA-76-6285 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-81-5910        TCGA-87-5896 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST3GAL6 MUTATED        0      0      1      1
  ST3GAL6 WILD-TYPE     77     93     44     59
D112V3, multiclass
[1] "Remove cluster labels:" "ST3GAL6 MUTATED"       
clus
  ST3GAL6 MUTATED ST3GAL6 WILD-TYPE 
                2               273 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-1806 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1831        TCGA-27-1832 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1833        TCGA-27-1834        TCGA-27-1835        TCGA-27-1836 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1837        TCGA-27-1838        TCGA-27-2518        TCGA-27-2519 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2521        TCGA-27-2523        TCGA-27-2524        TCGA-27-2526 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2527        TCGA-27-2528        TCGA-28-1747        TCGA-28-1753 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5211        TCGA-28-5213        TCGA-28-5214 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5215        TCGA-28-5216        TCGA-28-5218        TCGA-28-5219 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5220        TCGA-28-6450        TCGA-32-1970        TCGA-32-1977 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-1982        TCGA-32-1986 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-2491        TCGA-32-2494        TCGA-32-2495 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-2615        TCGA-32-2632        TCGA-32-2634        TCGA-32-2638 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-4208        TCGA-32-4209        TCGA-32-4210        TCGA-32-4211 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-4213        TCGA-32-4719        TCGA-32-5222        TCGA-41-2571 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-2572        TCGA-41-2573        TCGA-41-2575        TCGA-41-3392 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-3393        TCGA-41-3915        TCGA-41-4097        TCGA-41-5651 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-6646        TCGA-74-6573        TCGA-74-6575        TCGA-74-6577 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-74-6578        TCGA-74-6584        TCGA-76-4925        TCGA-76-4926 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6280        TCGA-76-6282 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6283        TCGA-76-6285        TCGA-76-6286        TCGA-76-6656 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6657        TCGA-76-6660        TCGA-76-6661        TCGA-76-6662 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6663        TCGA-76-6664        TCGA-81-5910        TCGA-81-5911 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-87-5896 
"ST3GAL6 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST3GAL6 MUTATED        1      1      0
  ST3GAL6 WILD-TYPE    137     60     76
D112V4, multiclass
[1] "Remove cluster labels:" "ST3GAL6 MUTATED"       
clus
  ST3GAL6 MUTATED ST3GAL6 WILD-TYPE 
                2               273 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-1806 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1831        TCGA-27-1832 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1833        TCGA-27-1834        TCGA-27-1835        TCGA-27-1836 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1837        TCGA-27-1838        TCGA-27-2518        TCGA-27-2519 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2521        TCGA-27-2523        TCGA-27-2524        TCGA-27-2526 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2527        TCGA-27-2528        TCGA-28-1747        TCGA-28-1753 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5211        TCGA-28-5213        TCGA-28-5214 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5215        TCGA-28-5216        TCGA-28-5218        TCGA-28-5219 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5220        TCGA-28-6450        TCGA-32-1970        TCGA-32-1977 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-1982        TCGA-32-1986 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-2491        TCGA-32-2494        TCGA-32-2495 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-2615        TCGA-32-2632        TCGA-32-2634        TCGA-32-2638 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-4208        TCGA-32-4209        TCGA-32-4210        TCGA-32-4211 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-4213        TCGA-32-4719        TCGA-32-5222        TCGA-41-2571 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-2572        TCGA-41-2573        TCGA-41-2575        TCGA-41-3392 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-3393        TCGA-41-3915        TCGA-41-4097        TCGA-41-5651 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-6646        TCGA-74-6573        TCGA-74-6575        TCGA-74-6577 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-74-6578        TCGA-74-6584        TCGA-76-4925        TCGA-76-4926 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6280        TCGA-76-6282 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6283        TCGA-76-6285        TCGA-76-6286        TCGA-76-6656 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6657        TCGA-76-6660        TCGA-76-6661        TCGA-76-6662 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6663        TCGA-76-6664        TCGA-81-5910        TCGA-81-5911 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-87-5896 
"ST3GAL6 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST3GAL6 MUTATED        3      2      0
  ST3GAL6 WILD-TYPE    292    479      7
D112V5, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               3               292
  CLUS_2               2               479
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST3GAL6 MUTATED        2      0      0      1
  ST3GAL6 WILD-TYPE    158    232     64    165
D112V6, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               2               158
  CLUS_2               0               232
  CLUS_3               0                64
  CLUS_4               1               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST3GAL6 MUTATED        4      0      1
  ST3GAL6 WILD-TYPE    223    235    191
D112V7, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               4               223
  CLUS_2               0               235
  CLUS_3               1               191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST3GAL6 MUTATED        3      1      1
  ST3GAL6 WILD-TYPE    193    189    267
D112V8, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               3               193
  CLUS_2               1               189
  CLUS_3               1               267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST3GAL6 MUTATED        1      1      1      0
  ST3GAL6 WILD-TYPE    135    106    182     83
D112V9, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               1               135
  CLUS_2               1               106
  CLUS_3               1               182
  CLUS_4               0                83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST3GAL6 MUTATED        0      1      2
  ST3GAL6 WILD-TYPE    222    183    101
D112V10, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               0               222
  CLUS_2               1               183
  CLUS_3               2               101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST3GAL6 MUTATED        1      0      2
  ST3GAL6 WILD-TYPE    183    162    157
D112V11, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               1               183
  CLUS_2               0               162
  CLUS_3               2               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST3GAL6 MUTATED        0      0      1      2
  ST3GAL6 WILD-TYPE     90    138    187     87
D112V12, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               0                90
  CLUS_2               0               138
  CLUS_3               1               187
  CLUS_4               2                87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(113) Variable = CLCN7 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLCN7 MUTATED        3      1      0      0
  CLCN7 WILD-TYPE     66     42     74     54
D113V1, multiclass
        clus
vv       CLCN7 MUTATED CLCN7 WILD-TYPE
  CLUS_1             3              66
  CLUS_2             1              42
  CLUS_3             0              74
  CLUS_4             0              54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLCN7 MUTATED        2      1      0      1
  CLCN7 WILD-TYPE     61     49     48     78
D113V2, multiclass
        clus
vv       CLCN7 MUTATED CLCN7 WILD-TYPE
  CLUS_1             2              61
  CLUS_2             1              49
  CLUS_3             0              48
  CLUS_4             1              78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLCN7 MUTATED        1      1      0      2
  CLCN7 WILD-TYPE     76     92     45     58
D113V3, multiclass
        clus
vv       CLCN7 MUTATED CLCN7 WILD-TYPE
  CLUS_1             1              76
  CLUS_2             1              92
  CLUS_3             0              45
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CLCN7 MUTATED        2      2      0
  CLCN7 WILD-TYPE    136     59     76
D113V4, multiclass
        clus
vv       CLCN7 MUTATED CLCN7 WILD-TYPE
  CLUS_1             2             136
  CLUS_2             2              59
  CLUS_3             0              76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CLCN7 MUTATED        4      3      0
  CLCN7 WILD-TYPE    291    478      7
D113V5, multiclass
        clus
vv       CLCN7 MUTATED CLCN7 WILD-TYPE
  CLUS_1             4             291
  CLUS_2             3             478
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLCN7 MUTATED        0      2      0      1
  CLCN7 WILD-TYPE    160    230     64    165
D113V6, multiclass
        clus
vv       CLCN7 MUTATED CLCN7 WILD-TYPE
  CLUS_1             0             160
  CLUS_2             2             230
  CLUS_3             0              64
  CLUS_4             1             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CLCN7 MUTATED        1      0      3
  CLCN7 WILD-TYPE    226    235    189
D113V7, multiclass
        clus
vv       CLCN7 MUTATED CLCN7 WILD-TYPE
  CLUS_1             1             226
  CLUS_2             0             235
  CLUS_3             3             189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CLCN7 MUTATED        1      0      3
  CLCN7 WILD-TYPE    195    190    265
D113V8, multiclass
        clus
vv       CLCN7 MUTATED CLCN7 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             0             190
  CLUS_3             3             265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLCN7 MUTATED        0      1      2      0
  CLCN7 WILD-TYPE    136    106    181     83
D113V9, multiclass
        clus
vv       CLCN7 MUTATED CLCN7 WILD-TYPE
  CLUS_1             0             136
  CLUS_2             1             106
  CLUS_3             2             181
  CLUS_4             0              83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CLCN7 MUTATED        1      1      1
  CLCN7 WILD-TYPE    221    183    102
D113V10, multiclass
        clus
vv       CLCN7 MUTATED CLCN7 WILD-TYPE
  CLUS_1             1             221
  CLUS_2             1             183
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CLCN7 MUTATED        0      1      2
  CLCN7 WILD-TYPE    184    161    157
D113V11, multiclass
        clus
vv       CLCN7 MUTATED CLCN7 WILD-TYPE
  CLUS_1             0             184
  CLUS_2             1             161
  CLUS_3             2             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLCN7 MUTATED        0      2      1      0
  CLCN7 WILD-TYPE     90    136    187     89
D113V12, multiclass
        clus
vv       CLCN7 MUTATED CLCN7 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             2             136
  CLUS_3             1             187
  CLUS_4             0              89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(114) Variable = CD99L2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD99L2 MUTATED        1      0      0      0
  CD99L2 WILD-TYPE     68     43     74     54
D114V1, multiclass
[1] "Remove cluster labels:" "CD99L2 MUTATED"        
clus
  CD99L2 MUTATED CD99L2 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD99L2 MUTATED        1      0      0      0
  CD99L2 WILD-TYPE     62     50     48     79
D114V2, multiclass
[1] "Remove cluster labels:" "CD99L2 MUTATED"        
clus
  CD99L2 MUTATED CD99L2 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD99L2 MUTATED        1      0      0      0
  CD99L2 WILD-TYPE     76     93     45     60
D114V3, multiclass
[1] "Remove cluster labels:" "CD99L2 MUTATED"        
clus
  CD99L2 MUTATED CD99L2 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0688 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CD99L2 MUTATED        0      0      1
  CD99L2 WILD-TYPE    138     61     75
D114V4, multiclass
[1] "Remove cluster labels:" "CD99L2 MUTATED"        
clus
  CD99L2 MUTATED CD99L2 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0688 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"CD99L2 WILD-TYPE" "CD99L2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CD99L2 MUTATED        1      4      0
  CD99L2 WILD-TYPE    294    477      7
D114V5, multiclass
        clus
vv       CD99L2 MUTATED CD99L2 WILD-TYPE
  CLUS_1              1              294
  CLUS_2              4              477
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD99L2 MUTATED        1      0      1      2
  CD99L2 WILD-TYPE    159    232     63    164
D114V6, multiclass
        clus
vv       CD99L2 MUTATED CD99L2 WILD-TYPE
  CLUS_1              1              159
  CLUS_2              0              232
  CLUS_3              1               63
  CLUS_4              2              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CD99L2 MUTATED        2      2      1
  CD99L2 WILD-TYPE    225    233    191
D114V7, multiclass
        clus
vv       CD99L2 MUTATED CD99L2 WILD-TYPE
  CLUS_1              2              225
  CLUS_2              2              233
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CD99L2 MUTATED        1      1      3
  CD99L2 WILD-TYPE    195    189    265
D114V8, multiclass
        clus
vv       CD99L2 MUTATED CD99L2 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              1              189
  CLUS_3              3              265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD99L2 MUTATED        0      1      1      2
  CD99L2 WILD-TYPE    136    106    182     81
D114V9, multiclass
        clus
vv       CD99L2 MUTATED CD99L2 WILD-TYPE
  CLUS_1              0              136
  CLUS_2              1              106
  CLUS_3              1              182
  CLUS_4              2               81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CD99L2 MUTATED        2      1      1
  CD99L2 WILD-TYPE    220    183    102
D114V10, multiclass
        clus
vv       CD99L2 MUTATED CD99L2 WILD-TYPE
  CLUS_1              2              220
  CLUS_2              1              183
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CD99L2 MUTATED        1      1      2
  CD99L2 WILD-TYPE    183    161    157
D114V11, multiclass
        clus
vv       CD99L2 MUTATED CD99L2 WILD-TYPE
  CLUS_1              1              183
  CLUS_2              1              161
  CLUS_3              2              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD99L2 MUTATED        0      1      3      0
  CD99L2 WILD-TYPE     90    137    185     89
D114V12, multiclass
        clus
vv       CD99L2 MUTATED CD99L2 WILD-TYPE
  CLUS_1              0               90
  CLUS_2              1              137
  CLUS_3              3              185
  CLUS_4              0               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(115) Variable = KRAS MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED        0      0      0      1
  KRAS WILD-TYPE     69     43     74     53
D115V1, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2562 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED        0      0      0      1
  KRAS WILD-TYPE     63     50     48     78
D115V2, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2562 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED        0      1      1      0
  KRAS WILD-TYPE     77     92     44     60
D115V3, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-87-5896 
"KRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED        1      0      1
  KRAS WILD-TYPE    137     61     75
D115V4, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-87-5896 
"KRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED        2      2      0
  KRAS WILD-TYPE    293    479      7
D115V5, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            2            293
  CLUS_2            2            479
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED        1      1      0      1
  KRAS WILD-TYPE    159    231     64    165
D115V6, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            1            159
  CLUS_2            1            231
  CLUS_3            0             64
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED        1      1      1
  KRAS WILD-TYPE    226    234    191
D115V7, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            1            226
  CLUS_2            1            234
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED        1      0      2
  KRAS WILD-TYPE    195    190    266
D115V8, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            1            195
  CLUS_2            0            190
  CLUS_3            2            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED        0      0      1      1
  KRAS WILD-TYPE    136    107    182     82
D115V9, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             2            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5397     TCGA-CS-6186     TCGA-CS-6188 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666     TCGA-CS-6667 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5280 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5F6     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED        1      1      0
  KRAS WILD-TYPE    221    183    103
D115V10, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             2            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5397     TCGA-CS-6186     TCGA-CS-6188 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666     TCGA-CS-6667 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5280 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5F6     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED        0      2      0
  KRAS WILD-TYPE    184    160    159
D115V11, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             2            503 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5397     TCGA-CS-6186     TCGA-CS-6188 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666     TCGA-CS-6667 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5281 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-RY-A840     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED        0      1      1      0
  KRAS WILD-TYPE     90    137    187     89
D115V12, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             2            503 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5397     TCGA-CS-6186     TCGA-CS-6188 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666     TCGA-CS-6667 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5281 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-RY-A840     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 

Clustering(116) Variable = PRG4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRG4 MUTATED        0      0      1      1
  PRG4 WILD-TYPE     69     43     73     53
D116V1, multiclass
[1] "Remove cluster labels:" "PRG4 MUTATED"          
clus
  PRG4 MUTATED PRG4 WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-15-0742     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5960     TCGA-26-1439 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2501     TCGA-28-2502 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-2509     TCGA-28-2510     TCGA-28-2513     TCGA-28-2514 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5204     TCGA-28-5207     TCGA-28-5208     TCGA-28-5209 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRG4 MUTATED        0      1      0      1
  PRG4 WILD-TYPE     63     49     48     78
D116V2, multiclass
[1] "Remove cluster labels:" "PRG4 MUTATED"          
clus
  PRG4 MUTATED PRG4 WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-15-0742     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5960     TCGA-26-1439 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2501     TCGA-28-2502 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-2509     TCGA-28-2510     TCGA-28-2513     TCGA-28-2514 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5204     TCGA-28-5207     TCGA-28-5208     TCGA-28-5209 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRG4 MUTATED        0      2      0      0
  PRG4 WILD-TYPE     77     91     45     60
D116V3, multiclass
[1] "Remove cluster labels:" "PRG4 MUTATED"          
clus
  PRG4 MUTATED PRG4 WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5960     TCGA-26-1439 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-26-6173 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-6174     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5211     TCGA-28-5213     TCGA-28-5214 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-4213     TCGA-32-4719     TCGA-32-5222     TCGA-41-2571 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-2572     TCGA-41-2573     TCGA-41-2575     TCGA-41-3392 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-3393     TCGA-41-3915     TCGA-41-4097     TCGA-41-5651 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6575     TCGA-74-6577 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-87-5896 
"PRG4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRG4 MUTATED        1      0      1
  PRG4 WILD-TYPE    137     61     75
D116V4, multiclass
[1] "Remove cluster labels:" "PRG4 MUTATED"          
clus
  PRG4 MUTATED PRG4 WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5960     TCGA-26-1439 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-26-6173 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-6174     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5211     TCGA-28-5213     TCGA-28-5214 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-4213     TCGA-32-4719     TCGA-32-5222     TCGA-41-2571 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-2572     TCGA-41-2573     TCGA-41-2575     TCGA-41-3392 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-3393     TCGA-41-3915     TCGA-41-4097     TCGA-41-5651 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6575     TCGA-74-6577 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-87-5896 
"PRG4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRG4 MUTATED        2      8      0
  PRG4 WILD-TYPE    293    473      7
D116V5, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            2            293
  CLUS_2            8            473
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRG4 MUTATED        2      4      1      3
  PRG4 WILD-TYPE    158    228     63    163
D116V6, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            2            158
  CLUS_2            4            228
  CLUS_3            1             63
  CLUS_4            3            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRG4 MUTATED        1      4      4
  PRG4 WILD-TYPE    226    231    188
D116V7, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            1            226
  CLUS_2            4            231
  CLUS_3            4            188
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRG4 MUTATED        1      5      3
  PRG4 WILD-TYPE    195    185    265
D116V8, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            5            185
  CLUS_3            3            265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRG4 MUTATED        4      2      2      0
  PRG4 WILD-TYPE    132    105    181     83
D116V9, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            4            132
  CLUS_2            2            105
  CLUS_3            2            181
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRG4 MUTATED        3      3      2
  PRG4 WILD-TYPE    219    181    101
D116V10, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            3            219
  CLUS_2            3            181
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRG4 MUTATED        2      2      4
  PRG4 WILD-TYPE    182    160    155
D116V11, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            2            182
  CLUS_2            2            160
  CLUS_3            4            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRG4 MUTATED        2      1      3      2
  PRG4 WILD-TYPE     88    137    185     87
D116V12, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            2             88
  CLUS_2            1            137
  CLUS_3            3            185
  CLUS_4            2             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(117) Variable = USP6 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP6 MUTATED        2      1      1      1
  USP6 WILD-TYPE     67     42     73     53
D117V1, multiclass
        clus
vv       USP6 MUTATED USP6 WILD-TYPE
  CLUS_1            2             67
  CLUS_2            1             42
  CLUS_3            1             73
  CLUS_4            1             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP6 MUTATED        1      1      1      2
  USP6 WILD-TYPE     62     49     47     77
D117V2, multiclass
        clus
vv       USP6 MUTATED USP6 WILD-TYPE
  CLUS_1            1             62
  CLUS_2            1             49
  CLUS_3            1             47
  CLUS_4            2             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP6 MUTATED        1      2      2      0
  USP6 WILD-TYPE     76     91     43     60
D117V3, multiclass
        clus
vv       USP6 MUTATED USP6 WILD-TYPE
  CLUS_1            1             76
  CLUS_2            2             91
  CLUS_3            2             43
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  USP6 MUTATED        4      1      0
  USP6 WILD-TYPE    134     60     76
D117V4, multiclass
        clus
vv       USP6 MUTATED USP6 WILD-TYPE
  CLUS_1            4            134
  CLUS_2            1             60
  CLUS_3            0             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  USP6 MUTATED        6      5      0
  USP6 WILD-TYPE    289    476      7
D117V5, multiclass
        clus
vv       USP6 MUTATED USP6 WILD-TYPE
  CLUS_1            6            289
  CLUS_2            5            476
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP6 MUTATED        3      3      1      1
  USP6 WILD-TYPE    157    229     63    165
D117V6, multiclass
        clus
vv       USP6 MUTATED USP6 WILD-TYPE
  CLUS_1            3            157
  CLUS_2            3            229
  CLUS_3            1             63
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  USP6 MUTATED        6      2      1
  USP6 WILD-TYPE    221    233    191
D117V7, multiclass
        clus
vv       USP6 MUTATED USP6 WILD-TYPE
  CLUS_1            6            221
  CLUS_2            2            233
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  USP6 MUTATED        4      3      2
  USP6 WILD-TYPE    192    187    266
D117V8, multiclass
        clus
vv       USP6 MUTATED USP6 WILD-TYPE
  CLUS_1            4            192
  CLUS_2            3            187
  CLUS_3            2            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP6 MUTATED        2      2      1      1
  USP6 WILD-TYPE    134    105    182     82
D117V9, multiclass
        clus
vv       USP6 MUTATED USP6 WILD-TYPE
  CLUS_1            2            134
  CLUS_2            2            105
  CLUS_3            1            182
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  USP6 MUTATED        2      1      3
  USP6 WILD-TYPE    220    183    100
D117V10, multiclass
        clus
vv       USP6 MUTATED USP6 WILD-TYPE
  CLUS_1            2            220
  CLUS_2            1            183
  CLUS_3            3            100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  USP6 MUTATED        2      2      2
  USP6 WILD-TYPE    182    160    157
D117V11, multiclass
        clus
vv       USP6 MUTATED USP6 WILD-TYPE
  CLUS_1            2            182
  CLUS_2            2            160
  CLUS_3            2            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP6 MUTATED        1      2      1      2
  USP6 WILD-TYPE     89    136    187     87
D117V12, multiclass
        clus
vv       USP6 MUTATED USP6 WILD-TYPE
  CLUS_1            1             89
  CLUS_2            2            136
  CLUS_3            1            187
  CLUS_4            2             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(118) Variable = TP63 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP63 MUTATED        1      1      2      1
  TP63 WILD-TYPE     68     42     72     53
D118V1, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            1             68
  CLUS_2            1             42
  CLUS_3            2             72
  CLUS_4            1             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP63 MUTATED        1      1      2      1
  TP63 WILD-TYPE     62     49     46     78
D118V2, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            1             62
  CLUS_2            1             49
  CLUS_3            2             46
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP63 MUTATED        1      1      1      3
  TP63 WILD-TYPE     76     92     44     57
D118V3, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            1             76
  CLUS_2            1             92
  CLUS_3            1             44
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP63 MUTATED        2      2      2
  TP63 WILD-TYPE    136     59     74
D118V4, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            2            136
  CLUS_2            2             59
  CLUS_3            2             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP63 MUTATED        5      4      0
  TP63 WILD-TYPE    290    477      7
D118V5, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            5            290
  CLUS_2            4            477
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP63 MUTATED        5      2      0      0
  TP63 WILD-TYPE    155    230     64    166
D118V6, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            5            155
  CLUS_2            2            230
  CLUS_3            0             64
  CLUS_4            0            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP63 MUTATED        5      1      0
  TP63 WILD-TYPE    222    234    192
D118V7, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            5            222
  CLUS_2            1            234
  CLUS_3            0            192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP63 MUTATED        3      3      0
  TP63 WILD-TYPE    193    187    268
D118V8, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            3            193
  CLUS_2            3            187
  CLUS_3            0            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP63 MUTATED        2      1      0      0
  TP63 WILD-TYPE    134    106    183     83
D118V9, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            2            134
  CLUS_2            1            106
  CLUS_3            0            183
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP63 MUTATED        2      0      1
  TP63 WILD-TYPE    220    184    102
D118V10, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            2            220
  CLUS_2            0            184
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP63 MUTATED        0      3      0
  TP63 WILD-TYPE    184    159    159
D118V11, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            0            184
  CLUS_2            3            159
  CLUS_3            0            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP63 MUTATED        1      2      0      0
  TP63 WILD-TYPE     89    136    188     89
D118V12, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            1             89
  CLUS_2            2            136
  CLUS_3            0            188
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(119) Variable = OR52M1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52M1 MUTATED        2      1      0      1
  OR52M1 WILD-TYPE     67     42     74     53
D119V1, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              2               67
  CLUS_2              1               42
  CLUS_3              0               74
  CLUS_4              1               53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52M1 MUTATED        1      2      0      1
  OR52M1 WILD-TYPE     62     48     48     78
D119V2, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              1               62
  CLUS_2              2               48
  CLUS_3              0               48
  CLUS_4              1               78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52M1 MUTATED        0      1      0      3
  OR52M1 WILD-TYPE     77     92     45     57
D119V3, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              0               77
  CLUS_2              1               92
  CLUS_3              0               45
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52M1 MUTATED        1      3      0
  OR52M1 WILD-TYPE    137     58     76
D119V4, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              1              137
  CLUS_2              3               58
  CLUS_3              0               76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52M1 MUTATED        5      3      0
  OR52M1 WILD-TYPE    290    478      7
D119V5, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              5              290
  CLUS_2              3              478
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52M1 MUTATED        2      2      1      0
  OR52M1 WILD-TYPE    158    230     63    166
D119V6, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              2              230
  CLUS_3              1               63
  CLUS_4              0              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52M1 MUTATED        4      2      1
  OR52M1 WILD-TYPE    223    233    191
D119V7, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              4              223
  CLUS_2              2              233
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52M1 MUTATED        4      2      1
  OR52M1 WILD-TYPE    192    188    267
D119V8, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              4              192
  CLUS_2              2              188
  CLUS_3              1              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52M1 MUTATED        2      1      1      0
  OR52M1 WILD-TYPE    134    106    182     83
D119V9, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              2              134
  CLUS_2              1              106
  CLUS_3              1              182
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52M1 MUTATED        2      1      1
  OR52M1 WILD-TYPE    220    183    102
D119V10, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              2              220
  CLUS_2              1              183
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52M1 MUTATED        2      1      1
  OR52M1 WILD-TYPE    182    161    158
D119V11, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              2              182
  CLUS_2              1              161
  CLUS_3              1              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52M1 MUTATED        1      1      1      1
  OR52M1 WILD-TYPE     89    137    187     88
D119V12, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              1               89
  CLUS_2              1              137
  CLUS_3              1              187
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(120) Variable = TNFSF9 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF9 MUTATED        1      1      0      0
  TNFSF9 WILD-TYPE     68     42     74     54
D120V1, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6285 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF9 MUTATED        1      0      0      1
  TNFSF9 WILD-TYPE     62     50     48     78
D120V2, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6285 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF9 MUTATED        2      1      0      0
  TNFSF9 WILD-TYPE     75     92     45     60
D120V3, multiclass
        clus
vv       TNFSF9 MUTATED TNFSF9 WILD-TYPE
  CLUS_1              2               75
  CLUS_2              1               92
  CLUS_3              0               45
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNFSF9 MUTATED        1      0      2
  TNFSF9 WILD-TYPE    137     61     74
D120V4, multiclass
        clus
vv       TNFSF9 MUTATED TNFSF9 WILD-TYPE
  CLUS_1              1              137
  CLUS_2              0               61
  CLUS_3              2               74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNFSF9 MUTATED        3      2      0
  TNFSF9 WILD-TYPE    292    479      7
D120V5, multiclass
        clus
vv       TNFSF9 MUTATED TNFSF9 WILD-TYPE
  CLUS_1              3              292
  CLUS_2              2              479
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF9 MUTATED        3      1      0      1
  TNFSF9 WILD-TYPE    157    231     64    165
D120V6, multiclass
        clus
vv       TNFSF9 MUTATED TNFSF9 WILD-TYPE
  CLUS_1              3              157
  CLUS_2              1              231
  CLUS_3              0               64
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNFSF9 MUTATED        0      2      0
  TNFSF9 WILD-TYPE    227    233    192
D120V7, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              652 
      TCGA-02-0047       TCGA-02-0055       TCGA-02-2483       TCGA-02-2485 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-02-2486       TCGA-06-0129       TCGA-06-0130       TCGA-06-0132 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0157       TCGA-06-0158       TCGA-06-0168 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0174       TCGA-06-0178       TCGA-06-0184       TCGA-06-0219 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0238       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0649       TCGA-06-0686       TCGA-06-0743       TCGA-06-0744 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0745       TCGA-06-0747       TCGA-06-0749       TCGA-06-0750 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0878       TCGA-06-0882       TCGA-06-1804       TCGA-06-2557 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-08-0386       TCGA-12-0616 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0821       TCGA-12-1597 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-5299       TCGA-14-0781       TCGA-14-0787       TCGA-14-0789 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0817       TCGA-14-1823       TCGA-14-1825 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-15-0742       TCGA-15-1444 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-1045       TCGA-19-1390       TCGA-19-2619 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1834 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1837       TCGA-27-2519       TCGA-27-2521 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2528 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2499       TCGA-28-2509 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5213 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5220 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1980       TCGA-32-1982       TCGA-32-2615 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4213 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-3915 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4932       TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-4943       TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-5394       TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6186       TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6666       TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6670       TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5275       TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5279       TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XA       TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XE       TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64L       TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64R       TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64W       TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A75M       TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393       TCGA-DU-6394 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7011       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A74J       TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7491       TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5EV       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNFSF9 MUTATED        0      1      1
  TNFSF9 WILD-TYPE    196    189    267
D120V8, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              652 
      TCGA-02-0047       TCGA-02-0055       TCGA-02-2483       TCGA-02-2485 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-02-2486       TCGA-06-0129       TCGA-06-0130       TCGA-06-0132 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0157       TCGA-06-0158       TCGA-06-0168 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0174       TCGA-06-0178       TCGA-06-0184       TCGA-06-0219 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0238       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0649       TCGA-06-0686       TCGA-06-0743       TCGA-06-0744 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0745       TCGA-06-0747       TCGA-06-0749       TCGA-06-0750 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0878       TCGA-06-0882       TCGA-06-1804       TCGA-06-2557 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-08-0386       TCGA-12-0616 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0821       TCGA-12-1597 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-5299       TCGA-14-0781       TCGA-14-0787       TCGA-14-0789 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0817       TCGA-14-1823       TCGA-14-1825 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-15-0742       TCGA-15-1444 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-1045       TCGA-19-1390       TCGA-19-2619 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1834 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1837       TCGA-27-2519       TCGA-27-2521 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2528 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2499       TCGA-28-2509 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5213 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5220 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1980       TCGA-32-1982       TCGA-32-2615 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4213 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-3915 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4932       TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-4943       TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-5394       TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6186       TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6666       TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6670       TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5275       TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5279       TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XA       TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XE       TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64L       TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64R       TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64W       TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A75M       TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393       TCGA-DU-6394 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7011       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A74J       TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7491       TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5EV       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF9 MUTATED        1      0      0      1
  TNFSF9 WILD-TYPE    135    107    183     82
D120V9, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              507 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7491       TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5EV       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNFSF9 MUTATED        2      0      0
  TNFSF9 WILD-TYPE    220    184    103
D120V10, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              507 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7491       TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5EV       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNFSF9 MUTATED        0      2      0
  TNFSF9 WILD-TYPE    184    160    159
D120V11, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              503 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF9 MUTATED        1      1      0      0
  TNFSF9 WILD-TYPE     89    137    188     89
D120V12, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              503 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 

Clustering(121) Variable = HEATR3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEATR3 MUTATED        0      1      0      1
  HEATR3 WILD-TYPE     69     42     74     53
D121V1, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4935       TCGA-76-6191 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEATR3 MUTATED        0      1      0      1
  HEATR3 WILD-TYPE     63     49     48     78
D121V2, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4935       TCGA-76-6191 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEATR3 MUTATED        0      1      1      0
  HEATR3 WILD-TYPE     77     92     44     60
D121V3, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4935       TCGA-76-6191 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-87-5896 
"HEATR3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HEATR3 MUTATED        1      0      1
  HEATR3 WILD-TYPE    137     61     75
D121V4, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4935       TCGA-76-6191 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-87-5896 
"HEATR3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HEATR3 MUTATED        2      2      0
  HEATR3 WILD-TYPE    293    479      7
D121V5, multiclass
        clus
vv       HEATR3 MUTATED HEATR3 WILD-TYPE
  CLUS_1              2              293
  CLUS_2              2              479
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEATR3 MUTATED        2      0      0      1
  HEATR3 WILD-TYPE    158    232     64    165
D121V6, multiclass
        clus
vv       HEATR3 MUTATED HEATR3 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              0              232
  CLUS_3              0               64
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HEATR3 MUTATED        2      1      0
  HEATR3 WILD-TYPE    225    234    192
D121V7, multiclass
        clus
vv       HEATR3 MUTATED HEATR3 WILD-TYPE
  CLUS_1              2              225
  CLUS_2              1              234
  CLUS_3              0              192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HEATR3 MUTATED        1      1      1
  HEATR3 WILD-TYPE    195    189    267
D121V8, multiclass
        clus
vv       HEATR3 MUTATED HEATR3 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              1              189
  CLUS_3              1              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEATR3 MUTATED        0      1      1      0
  HEATR3 WILD-TYPE    136    106    182     83
D121V9, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              507 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6394 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HEATR3 MUTATED        0      1      1
  HEATR3 WILD-TYPE    222    183    102
D121V10, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              507 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6394 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HEATR3 MUTATED        0      1      1
  HEATR3 WILD-TYPE    184    161    158
D121V11, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              503 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6394       TCGA-DU-6395 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495       TCGA-HW-8319 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEATR3 MUTATED        0      0      2      0
  HEATR3 WILD-TYPE     90    138    186     89
D121V12, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              503 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6394       TCGA-DU-6395 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495       TCGA-HW-8319 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 

Clustering(122) Variable = USP28 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP28 MUTATED        2      0      0      0
  USP28 WILD-TYPE     67     43     74     54
D122V1, multiclass
[1] "Remove cluster labels:" "USP28 MUTATED"         
clus
  USP28 MUTATED USP28 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-26-5139      TCGA-27-1830      TCGA-27-1831      TCGA-27-1833 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP28 MUTATED        2      0      0      0
  USP28 WILD-TYPE     61     50     48     79
D122V2, multiclass
[1] "Remove cluster labels:" "USP28 MUTATED"         
clus
  USP28 MUTATED USP28 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-26-5139      TCGA-27-1830      TCGA-27-1831      TCGA-27-1833 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP28 MUTATED        2      0      0      0
  USP28 WILD-TYPE     75     93     45     60
D122V3, multiclass
[1] "Remove cluster labels:" "USP28 MUTATED"         
clus
  USP28 MUTATED USP28 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-26-5139      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2510      TCGA-28-2513 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-87-5896 
"USP28 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP28 MUTATED        0      1      1
  USP28 WILD-TYPE    138     60     75
D122V4, multiclass
[1] "Remove cluster labels:" "USP28 MUTATED"         
clus
  USP28 MUTATED USP28 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-26-5139      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2510      TCGA-28-2513 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-87-5896 
"USP28 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP28 MUTATED        3      2      0
  USP28 WILD-TYPE    292    479      7
D122V5, multiclass
        clus
vv       USP28 MUTATED USP28 WILD-TYPE
  CLUS_1             3             292
  CLUS_2             2             479
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP28 MUTATED        1      0      0      1
  USP28 WILD-TYPE    159    232     64    165
D122V6, multiclass
[1] "Remove cluster labels:" "USP28 MUTATED"         
clus
  USP28 MUTATED USP28 WILD-TYPE 
              2             620 
     TCGA-06-0152      TCGA-06-0650      TCGA-06-1804      TCGA-06-1806 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0862      TCGA-14-1043      TCGA-14-1395 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-14-1450      TCGA-15-1444      TCGA-19-5947      TCGA-19-5950 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-26-6174      TCGA-28-2501      TCGA-28-2510      TCGA-28-5204 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5211 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-5222      TCGA-41-5651 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-87-5896      TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-5394      TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-6666      TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-6670      TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-5275      TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-5279      TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A4XA      TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A4XE      TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A64L      TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A64R      TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A64W      TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A75M      TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP28 MUTATED        3      0      1
  USP28 WILD-TYPE    224    235    191
D122V7, multiclass
        clus
vv       USP28 MUTATED USP28 WILD-TYPE
  CLUS_1             3             224
  CLUS_2             0             235
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP28 MUTATED        2      1      1
  USP28 WILD-TYPE    194    189    267
D122V8, multiclass
        clus
vv       USP28 MUTATED USP28 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             1             189
  CLUS_3             1             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP28 MUTATED        0      1      1      0
  USP28 WILD-TYPE    136    106    182     83
D122V9, multiclass
[1] "Remove cluster labels:" "USP28 MUTATED"         
clus
  USP28 MUTATED USP28 WILD-TYPE 
              2             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP28 MUTATED        0      1      1
  USP28 WILD-TYPE    222    183    102
D122V10, multiclass
[1] "Remove cluster labels:" "USP28 MUTATED"         
clus
  USP28 MUTATED USP28 WILD-TYPE 
              2             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP28 MUTATED        0      0      2
  USP28 WILD-TYPE    184    162    157
D122V11, multiclass
[1] "Remove cluster labels:" "USP28 MUTATED"         
clus
  USP28 MUTATED USP28 WILD-TYPE 
              2             503 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A77W      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP28 MUTATED        0      0      2      0
  USP28 WILD-TYPE     90    138    186     89
D122V12, multiclass
[1] "Remove cluster labels:" "USP28 MUTATED"         
clus
  USP28 MUTATED USP28 WILD-TYPE 
              2             503 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-P5-A77W      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"USP28 WILD-TYPE" "USP28 WILD-TYPE" "USP28 WILD-TYPE" 

Clustering(123) Variable = ACADS MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACADS MUTATED        2      0      0      1
  ACADS WILD-TYPE     67     43     74     53
D123V1, multiclass
        clus
vv       ACADS MUTATED ACADS WILD-TYPE
  CLUS_1             2              67
  CLUS_2             0              43
  CLUS_3             0              74
  CLUS_4             1              53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACADS MUTATED        2      1      0      0
  ACADS WILD-TYPE     61     49     48     79
D123V2, multiclass
        clus
vv       ACADS MUTATED ACADS WILD-TYPE
  CLUS_1             2              61
  CLUS_2             1              49
  CLUS_3             0              48
  CLUS_4             0              79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACADS MUTATED        2      0      0      1
  ACADS WILD-TYPE     75     93     45     59
D123V3, multiclass
        clus
vv       ACADS MUTATED ACADS WILD-TYPE
  CLUS_1             2              75
  CLUS_2             0              93
  CLUS_3             0              45
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACADS MUTATED        1      1      1
  ACADS WILD-TYPE    137     60     75
D123V4, multiclass
        clus
vv       ACADS MUTATED ACADS WILD-TYPE
  CLUS_1             1             137
  CLUS_2             1              60
  CLUS_3             1              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACADS MUTATED        3      1      1
  ACADS WILD-TYPE    292    480      6
D123V5, multiclass
        clus
vv       ACADS MUTATED ACADS WILD-TYPE
  CLUS_1             3             292
  CLUS_2             1             480
  CLUS_3             1               6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACADS MUTATED        3      0      0      0
  ACADS WILD-TYPE    157    232     64    166
D123V6, multiclass
        clus
vv       ACADS MUTATED ACADS WILD-TYPE
  CLUS_1             3             157
  CLUS_2             0             232
  CLUS_3             0              64
  CLUS_4             0             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACADS MUTATED        2      0      0
  ACADS WILD-TYPE    225    235    192
D123V7, multiclass
[1] "Remove cluster labels:" "ACADS MUTATED"         
clus
  ACADS MUTATED ACADS WILD-TYPE 
              2             652 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1834 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1837      TCGA-27-2519      TCGA-27-2521 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2528 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2499      TCGA-28-2509 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5213 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5220 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1980      TCGA-32-1982      TCGA-32-2615 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4213 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-3915 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-4932      TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-5394      TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6666      TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6670      TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5275      TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5279      TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XA      TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XE      TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64L      TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64R      TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64W      TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75M      TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8111 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A5RC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J      TCGA-HT-A74K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACADS MUTATED        2      0      0
  ACADS WILD-TYPE    194    190    268
D123V8, multiclass
[1] "Remove cluster labels:" "ACADS MUTATED"         
clus
  ACADS MUTATED ACADS WILD-TYPE 
              2             652 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1834 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1837      TCGA-27-2519      TCGA-27-2521 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2528 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2499      TCGA-28-2509 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5213 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5220 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1980      TCGA-32-1982      TCGA-32-2615 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4213 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-3915 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-4932      TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-5394      TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6666      TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6670      TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5275      TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5279      TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XA      TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XE      TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64L      TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64R      TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64W      TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75M      TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8111 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A5RC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J      TCGA-HT-A74K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACADS MUTATED        1      1      0      0
  ACADS WILD-TYPE    135    106    183     83
D123V9, multiclass
[1] "Remove cluster labels:" "ACADS MUTATED"         
clus
  ACADS MUTATED ACADS WILD-TYPE 
              2             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACADS MUTATED        0      0      2
  ACADS WILD-TYPE    222    184    101
D123V10, multiclass
[1] "Remove cluster labels:" "ACADS MUTATED"         
clus
  ACADS MUTATED ACADS WILD-TYPE 
              2             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACADS MUTATED        2      0      0
  ACADS WILD-TYPE    182    162    159
D123V11, multiclass
[1] "Remove cluster labels:" "ACADS MUTATED"         
clus
  ACADS MUTATED ACADS WILD-TYPE 
              2             503 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8111 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A5RC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495      TCGA-HW-8319 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACADS MUTATED        0      0      0      2
  ACADS WILD-TYPE     90    138    188     87
D123V12, multiclass
[1] "Remove cluster labels:" "ACADS MUTATED"         
clus
  ACADS MUTATED ACADS WILD-TYPE 
              2             503 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8111 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A5RC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495      TCGA-HW-8319 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 

Clustering(124) Variable = RGL2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGL2 MUTATED        0      0      0      0
  RGL2 WILD-TYPE     69     43     74     54
D124V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGL2 MUTATED        0      0      0      0
  RGL2 WILD-TYPE     63     50     48     79
D124V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGL2 MUTATED        0      0      0      0
  RGL2 WILD-TYPE     77     93     45     60
D124V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RGL2 MUTATED        0      0      0
  RGL2 WILD-TYPE    138     61     76
D124V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RGL2 MUTATED        0      4      0
  RGL2 WILD-TYPE    295    477      7
D124V5, multiclass
        clus
vv       RGL2 MUTATED RGL2 WILD-TYPE
  CLUS_1            0            295
  CLUS_2            4            477
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGL2 MUTATED        1      2      0      1
  RGL2 WILD-TYPE    159    230     64    165
D124V6, multiclass
        clus
vv       RGL2 MUTATED RGL2 WILD-TYPE
  CLUS_1            1            159
  CLUS_2            2            230
  CLUS_3            0             64
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RGL2 MUTATED        1      2      1
  RGL2 WILD-TYPE    226    233    191
D124V7, multiclass
        clus
vv       RGL2 MUTATED RGL2 WILD-TYPE
  CLUS_1            1            226
  CLUS_2            2            233
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RGL2 MUTATED        0      3      1
  RGL2 WILD-TYPE    196    187    267
D124V8, multiclass
        clus
vv       RGL2 MUTATED RGL2 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            3            187
  CLUS_3            1            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGL2 MUTATED        0      2      2      0
  RGL2 WILD-TYPE    136    105    181     83
D124V9, multiclass
        clus
vv       RGL2 MUTATED RGL2 WILD-TYPE
  CLUS_1            0            136
  CLUS_2            2            105
  CLUS_3            2            181
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RGL2 MUTATED        1      1      2
  RGL2 WILD-TYPE    221    183    101
D124V10, multiclass
        clus
vv       RGL2 MUTATED RGL2 WILD-TYPE
  CLUS_1            1            221
  CLUS_2            1            183
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RGL2 MUTATED        1      1      2
  RGL2 WILD-TYPE    183    161    157
D124V11, multiclass
        clus
vv       RGL2 MUTATED RGL2 WILD-TYPE
  CLUS_1            1            183
  CLUS_2            1            161
  CLUS_3            2            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGL2 MUTATED        0      1      3      0
  RGL2 WILD-TYPE     90    137    185     89
D124V12, multiclass
        clus
vv       RGL2 MUTATED RGL2 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            1            137
  CLUS_3            3            185
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(125) Variable = DSG3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSG3 MUTATED        2      3      1      0
  DSG3 WILD-TYPE     67     40     73     54
D125V1, multiclass
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1            2             67
  CLUS_2            3             40
  CLUS_3            1             73
  CLUS_4            0             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSG3 MUTATED        2      2      0      2
  DSG3 WILD-TYPE     61     48     48     77
D125V2, multiclass
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1            2             61
  CLUS_2            2             48
  CLUS_3            0             48
  CLUS_4            2             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSG3 MUTATED        1      3      1      3
  DSG3 WILD-TYPE     76     90     44     57
D125V3, multiclass
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1            1             76
  CLUS_2            3             90
  CLUS_3            1             44
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DSG3 MUTATED        4      2      2
  DSG3 WILD-TYPE    134     59     74
D125V4, multiclass
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1            4            134
  CLUS_2            2             59
  CLUS_3            2             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DSG3 MUTATED       10      1      0
  DSG3 WILD-TYPE    285    480      7
D125V5, multiclass
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1           10            285
  CLUS_2            1            480
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSG3 MUTATED        5      1      0      0
  DSG3 WILD-TYPE    155    231     64    166
D125V6, multiclass
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1            5            155
  CLUS_2            1            231
  CLUS_3            0             64
  CLUS_4            0            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DSG3 MUTATED        5      1      0
  DSG3 WILD-TYPE    222    234    192
D125V7, multiclass
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1            5            222
  CLUS_2            1            234
  CLUS_3            0            192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DSG3 MUTATED        5      1      0
  DSG3 WILD-TYPE    191    189    268
D125V8, multiclass
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1            5            191
  CLUS_2            1            189
  CLUS_3            0            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSG3 MUTATED        2      0      0      0
  DSG3 WILD-TYPE    134    107    183     83
D125V9, multiclass
[1] "Remove cluster labels:" "DSG3 MUTATED"          
clus
  DSG3 MUTATED DSG3 WILD-TYPE 
             2            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8012 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DSG3 MUTATED        1      0      1
  DSG3 WILD-TYPE    221    184    102
D125V10, multiclass
[1] "Remove cluster labels:" "DSG3 MUTATED"          
clus
  DSG3 MUTATED DSG3 WILD-TYPE 
             2            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8012 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DSG3 MUTATED        2      0      0
  DSG3 WILD-TYPE    182    162    159
D125V11, multiclass
[1] "Remove cluster labels:" "DSG3 MUTATED"          
clus
  DSG3 MUTATED DSG3 WILD-TYPE 
             2            503 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8012     TCGA-HT-8013 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495     TCGA-HW-8319 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSG3 MUTATED        1      0      0      1
  DSG3 WILD-TYPE     89    138    188     88
D125V12, multiclass
[1] "Remove cluster labels:" "DSG3 MUTATED"          
clus
  DSG3 MUTATED DSG3 WILD-TYPE 
             2            503 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8012     TCGA-HT-8013 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495     TCGA-HW-8319 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 

Clustering(126) Variable = MYO5A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO5A MUTATED        0      0      0      0
  MYO5A WILD-TYPE     69     43     74     54
D126V1, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO5A MUTATED        0      0      0      0
  MYO5A WILD-TYPE     63     50     48     79
D126V2, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO5A MUTATED        0      1      0      0
  MYO5A WILD-TYPE     77     92     45     60
D126V3, multiclass
[1] "Remove cluster labels:" "MYO5A MUTATED"         
clus
  MYO5A MUTATED MYO5A WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-26-5139      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2502      TCGA-28-2509 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5211 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-41-6646      TCGA-74-6575 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO5A MUTATED        0      0      1
  MYO5A WILD-TYPE    138     61     75
D126V4, multiclass
[1] "Remove cluster labels:" "MYO5A MUTATED"         
clus
  MYO5A MUTATED MYO5A WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-26-5139      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2502      TCGA-28-2509 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5211 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-41-6646      TCGA-74-6575 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO5A MUTATED        3      2      0
  MYO5A WILD-TYPE    292    479      7
D126V5, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             3             292
  CLUS_2             2             479
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO5A MUTATED        4      0      0      1
  MYO5A WILD-TYPE    156    232     64    165
D126V6, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             4             156
  CLUS_2             0             232
  CLUS_3             0              64
  CLUS_4             1             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO5A MUTATED        3      0      1
  MYO5A WILD-TYPE    224    235    191
D126V7, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             3             224
  CLUS_2             0             235
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO5A MUTATED        2      1      1
  MYO5A WILD-TYPE    194    189    267
D126V8, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             2             194
  CLUS_2             1             189
  CLUS_3             1             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO5A MUTATED        2      1      1      0
  MYO5A WILD-TYPE    134    106    182     83
D126V9, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             2             134
  CLUS_2             1             106
  CLUS_3             1             182
  CLUS_4             0              83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO5A MUTATED        1      1      2
  MYO5A WILD-TYPE    221    183    101
D126V10, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             1             221
  CLUS_2             1             183
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO5A MUTATED        2      0      2
  MYO5A WILD-TYPE    182    162    157
D126V11, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             2             182
  CLUS_2             0             162
  CLUS_3             2             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO5A MUTATED        1      0      2      1
  MYO5A WILD-TYPE     89    138    186     88
D126V12, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             1              89
  CLUS_2             0             138
  CLUS_3             2             186
  CLUS_4             1              88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(127) Variable = TMPRSS6 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS6 MUTATED        2      0      3      1
  TMPRSS6 WILD-TYPE     67     43     71     53
D127V1, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               2                67
  CLUS_2               0                43
  CLUS_3               3                71
  CLUS_4               1                53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS6 MUTATED        3      1      1      1
  TMPRSS6 WILD-TYPE     60     49     47     78
D127V2, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               3                60
  CLUS_2               1                49
  CLUS_3               1                47
  CLUS_4               1                78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS6 MUTATED        3      1      1      1
  TMPRSS6 WILD-TYPE     74     92     44     59
D127V3, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               3                74
  CLUS_2               1                92
  CLUS_3               1                44
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS6 MUTATED        2      3      1
  TMPRSS6 WILD-TYPE    136     58     75
D127V4, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               2               136
  CLUS_2               3                58
  CLUS_3               1                75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS6 MUTATED        7      2      0
  TMPRSS6 WILD-TYPE    288    479      7
D127V5, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               7               288
  CLUS_2               2               479
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS6 MUTATED        5      1      0      0
  TMPRSS6 WILD-TYPE    155    231     64    166
D127V6, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               5               155
  CLUS_2               1               231
  CLUS_3               0                64
  CLUS_4               0               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS6 MUTATED        8      1      0
  TMPRSS6 WILD-TYPE    219    234    192
D127V7, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               8               219
  CLUS_2               1               234
  CLUS_3               0               192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS6 MUTATED        6      3      0
  TMPRSS6 WILD-TYPE    190    187    268
D127V8, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               6               190
  CLUS_2               3               187
  CLUS_3               0               268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS6 MUTATED        1      2      0      0
  TMPRSS6 WILD-TYPE    135    105    183     83
D127V9, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               1               135
  CLUS_2               2               105
  CLUS_3               0               183
  CLUS_4               0                83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS6 MUTATED        1      0      2
  TMPRSS6 WILD-TYPE    221    184    101
D127V10, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               1               221
  CLUS_2               0               184
  CLUS_3               2               101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS6 MUTATED        2      0      1
  TMPRSS6 WILD-TYPE    182    162    158
D127V11, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               2               182
  CLUS_2               0               162
  CLUS_3               1               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS6 MUTATED        1      0      1      1
  TMPRSS6 WILD-TYPE     89    138    187     88
D127V12, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               1                89
  CLUS_2               0               138
  CLUS_3               1               187
  CLUS_4               1                88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(128) Variable = DYNC1I1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DYNC1I1 MUTATED        0      0      2      3
  DYNC1I1 WILD-TYPE     69     43     72     51
D128V1, multiclass
        clus
vv       DYNC1I1 MUTATED DYNC1I1 WILD-TYPE
  CLUS_1               0                69
  CLUS_2               0                43
  CLUS_3               2                72
  CLUS_4               3                51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DYNC1I1 MUTATED        0      2      0      3
  DYNC1I1 WILD-TYPE     63     48     48     76
D128V2, multiclass
        clus
vv       DYNC1I1 MUTATED DYNC1I1 WILD-TYPE
  CLUS_1               0                63
  CLUS_2               2                48
  CLUS_3               0                48
  CLUS_4               3                76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DYNC1I1 MUTATED        1      3      2      1
  DYNC1I1 WILD-TYPE     76     90     43     59
D128V3, multiclass
        clus
vv       DYNC1I1 MUTATED DYNC1I1 WILD-TYPE
  CLUS_1               1                76
  CLUS_2               3                90
  CLUS_3               2                43
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DYNC1I1 MUTATED        6      0      1
  DYNC1I1 WILD-TYPE    132     61     75
D128V4, multiclass
        clus
vv       DYNC1I1 MUTATED DYNC1I1 WILD-TYPE
  CLUS_1               6               132
  CLUS_2               0                61
  CLUS_3               1                75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DYNC1I1 MUTATED        6      4      0
  DYNC1I1 WILD-TYPE    289    477      7
D128V5, multiclass
        clus
vv       DYNC1I1 MUTATED DYNC1I1 WILD-TYPE
  CLUS_1               6               289
  CLUS_2               4               477
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DYNC1I1 MUTATED        4      1      0      0
  DYNC1I1 WILD-TYPE    156    231     64    166
D128V6, multiclass
        clus
vv       DYNC1I1 MUTATED DYNC1I1 WILD-TYPE
  CLUS_1               4               156
  CLUS_2               1               231
  CLUS_3               0                64
  CLUS_4               0               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DYNC1I1 MUTATED        3      1      1
  DYNC1I1 WILD-TYPE    224    234    191
D128V7, multiclass
        clus
vv       DYNC1I1 MUTATED DYNC1I1 WILD-TYPE
  CLUS_1               3               224
  CLUS_2               1               234
  CLUS_3               1               191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DYNC1I1 MUTATED        2      2      1
  DYNC1I1 WILD-TYPE    194    188    267
D128V8, multiclass
        clus
vv       DYNC1I1 MUTATED DYNC1I1 WILD-TYPE
  CLUS_1               2               194
  CLUS_2               2               188
  CLUS_3               1               267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DYNC1I1 MUTATED        1      1      1      0
  DYNC1I1 WILD-TYPE    135    106    182     83
D128V9, multiclass
        clus
vv       DYNC1I1 MUTATED DYNC1I1 WILD-TYPE
  CLUS_1               1               135
  CLUS_2               1               106
  CLUS_3               1               182
  CLUS_4               0                83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DYNC1I1 MUTATED        1      1      1
  DYNC1I1 WILD-TYPE    221    183    102
D128V10, multiclass
        clus
vv       DYNC1I1 MUTATED DYNC1I1 WILD-TYPE
  CLUS_1               1               221
  CLUS_2               1               183
  CLUS_3               1               102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DYNC1I1 MUTATED        1      0      2
  DYNC1I1 WILD-TYPE    183    162    157
D128V11, multiclass
        clus
vv       DYNC1I1 MUTATED DYNC1I1 WILD-TYPE
  CLUS_1               1               183
  CLUS_2               0               162
  CLUS_3               2               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DYNC1I1 MUTATED        1      0      2      0
  DYNC1I1 WILD-TYPE     89    138    186     89
D128V12, multiclass
        clus
vv       DYNC1I1 MUTATED DYNC1I1 WILD-TYPE
  CLUS_1               1                89
  CLUS_2               0               138
  CLUS_3               2               186
  CLUS_4               0                89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(129) Variable = PASD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PASD1 MUTATED        1      0      1      1
  PASD1 WILD-TYPE     68     43     73     53
D129V1, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             1              68
  CLUS_2             0              43
  CLUS_3             1              73
  CLUS_4             1              53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PASD1 MUTATED        0      1      1      1
  PASD1 WILD-TYPE     63     49     47     78
D129V2, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             0              63
  CLUS_2             1              49
  CLUS_3             1              47
  CLUS_4             1              78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PASD1 MUTATED        3      1      0      1
  PASD1 WILD-TYPE     74     92     45     59
D129V3, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             3              74
  CLUS_2             1              92
  CLUS_3             0              45
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PASD1 MUTATED        1      0      4
  PASD1 WILD-TYPE    137     61     72
D129V4, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             1             137
  CLUS_2             0              61
  CLUS_3             4              72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PASD1 MUTATED        5      4      0
  PASD1 WILD-TYPE    290    477      7
D129V5, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             5             290
  CLUS_2             4             477
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PASD1 MUTATED        3      2      0      2
  PASD1 WILD-TYPE    157    230     64    164
D129V6, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             3             157
  CLUS_2             2             230
  CLUS_3             0              64
  CLUS_4             2             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PASD1 MUTATED        0      1      3
  PASD1 WILD-TYPE    227    234    189
D129V7, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             0             227
  CLUS_2             1             234
  CLUS_3             3             189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PASD1 MUTATED        0      1      3
  PASD1 WILD-TYPE    196    189    265
D129V8, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             0             196
  CLUS_2             1             189
  CLUS_3             3             265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PASD1 MUTATED        1      1      1      1
  PASD1 WILD-TYPE    135    106    182     82
D129V9, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             1             135
  CLUS_2             1             106
  CLUS_3             1             182
  CLUS_4             1              82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PASD1 MUTATED        1      3      0
  PASD1 WILD-TYPE    221    181    103
D129V10, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             1             221
  CLUS_2             3             181
  CLUS_3             0             103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PASD1 MUTATED        0      1      3
  PASD1 WILD-TYPE    184    161    156
D129V11, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             0             184
  CLUS_2             1             161
  CLUS_3             3             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PASD1 MUTATED        0      2      2      0
  PASD1 WILD-TYPE     90    136    186     89
D129V12, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             2             136
  CLUS_3             2             186
  CLUS_4             0              89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(130) Variable = RPL7 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL7 MUTATED        0      0      1      0
  RPL7 WILD-TYPE     69     43     73     54
D130V1, multiclass
[1] "Remove cluster labels:" "RPL7 MUTATED"          
clus
  RPL7 MUTATED RPL7 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL7 MUTATED        0      0      1      0
  RPL7 WILD-TYPE     63     50     47     79
D130V2, multiclass
[1] "Remove cluster labels:" "RPL7 MUTATED"          
clus
  RPL7 MUTATED RPL7 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL7 MUTATED        0      0      0      1
  RPL7 WILD-TYPE     77     93     45     59
D130V3, multiclass
[1] "Remove cluster labels:" "RPL7 MUTATED"          
clus
  RPL7 MUTATED RPL7 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-1806 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL7 MUTATED        0      1      0
  RPL7 WILD-TYPE    138     60     76
D130V4, multiclass
[1] "Remove cluster labels:" "RPL7 MUTATED"          
clus
  RPL7 MUTATED RPL7 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-1806 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL7 MUTATED        2      1      0
  RPL7 WILD-TYPE    293    480      7
D130V5, multiclass
        clus
vv       RPL7 MUTATED RPL7 WILD-TYPE
  CLUS_1            2            293
  CLUS_2            1            480
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL7 MUTATED        2      0      0      0
  RPL7 WILD-TYPE    158    232     64    166
D130V6, multiclass
[1] "Remove cluster labels:" "RPL7 MUTATED"          
clus
  RPL7 MUTATED RPL7 WILD-TYPE 
             2            620 
    TCGA-06-0152     TCGA-06-0650     TCGA-06-1804     TCGA-06-1806 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0862     TCGA-14-1043     TCGA-14-1395 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-14-1450     TCGA-15-1444     TCGA-19-5947     TCGA-19-5950 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-26-6173 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-26-6174     TCGA-28-2501     TCGA-28-2510     TCGA-28-5204 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-5222     TCGA-41-5651 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6575     TCGA-74-6577 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-87-5896     TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-4943     TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-5394     TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-6670     TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-5275     TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-5279     TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A75M     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5855 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011     TCGA-DU-7012 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TJ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74J     TCGA-HT-A74K 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL7 MUTATED        3      0      0
  RPL7 WILD-TYPE    224    235    192
D130V7, multiclass
        clus
vv       RPL7 MUTATED RPL7 WILD-TYPE
  CLUS_1            3            224
  CLUS_2            0            235
  CLUS_3            0            192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL7 MUTATED        2      1      0
  RPL7 WILD-TYPE    194    189    268
D130V8, multiclass
        clus
vv       RPL7 MUTATED RPL7 WILD-TYPE
  CLUS_1            2            194
  CLUS_2            1            189
  CLUS_3            0            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL7 MUTATED        1      1      0      0
  RPL7 WILD-TYPE    135    106    183     83
D130V9, multiclass
[1] "Remove cluster labels:" "RPL7 MUTATED"          
clus
  RPL7 MUTATED RPL7 WILD-TYPE 
             2            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL7 MUTATED        0      0      2
  RPL7 WILD-TYPE    222    184    101
D130V10, multiclass
[1] "Remove cluster labels:" "RPL7 MUTATED"          
clus
  RPL7 MUTATED RPL7 WILD-TYPE 
             2            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL7 MUTATED        1      0      1
  RPL7 WILD-TYPE    183    162    158
D130V11, multiclass
[1] "Remove cluster labels:" "RPL7 MUTATED"          
clus
  RPL7 MUTATED RPL7 WILD-TYPE 
             2            503 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7012 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TJ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495     TCGA-HW-8319 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL7 MUTATED        0      0      1      1
  RPL7 WILD-TYPE     90    138    187     88
D130V12, multiclass
[1] "Remove cluster labels:" "RPL7 MUTATED"          
clus
  RPL7 MUTATED RPL7 WILD-TYPE 
             2            503 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7012 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TJ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495     TCGA-HW-8319 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"RPL7 WILD-TYPE" "RPL7 WILD-TYPE" "RPL7 WILD-TYPE" 

Clustering(131) Variable = CES3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CES3 MUTATED        1      0      0      0
  CES3 WILD-TYPE     68     43     74     54
D131V1, multiclass
[1] "Remove cluster labels:" "CES3 MUTATED"          
clus
  CES3 MUTATED CES3 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2623     TCGA-19-2624 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2629     TCGA-19-2631     TCGA-19-4068 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CES3 MUTATED        1      0      0      0
  CES3 WILD-TYPE     62     50     48     79
D131V2, multiclass
[1] "Remove cluster labels:" "CES3 MUTATED"          
clus
  CES3 MUTATED CES3 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2623     TCGA-19-2624 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2629     TCGA-19-2631     TCGA-19-4068 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CES3 MUTATED        1      0      0      0
  CES3 WILD-TYPE     76     93     45     60
D131V3, multiclass
[1] "Remove cluster labels:" "CES3 MUTATED"          
clus
  CES3 MUTATED CES3 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5950 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CES3 MUTATED        0      1      0
  CES3 WILD-TYPE    138     60     76
D131V4, multiclass
[1] "Remove cluster labels:" "CES3 MUTATED"          
clus
  CES3 MUTATED CES3 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5950 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" "CES3 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"CES3 WILD-TYPE" "CES3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CES3 MUTATED        1      3      0
  CES3 WILD-TYPE    294    478      7
D131V5, multiclass
        clus
vv       CES3 MUTATED CES3 WILD-TYPE
  CLUS_1            1            294
  CLUS_2            3            478
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CES3 MUTATED        1      2      0      1
  CES3 WILD-TYPE    159    230     64    165
D131V6, multiclass
        clus
vv       CES3 MUTATED CES3 WILD-TYPE
  CLUS_1            1            159
  CLUS_2            2            230
  CLUS_3            0             64
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CES3 MUTATED        0      1      2
  CES3 WILD-TYPE    227    234    190
D131V7, multiclass
        clus
vv       CES3 MUTATED CES3 WILD-TYPE
  CLUS_1            0            227
  CLUS_2            1            234
  CLUS_3            2            190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CES3 MUTATED        0      1      2
  CES3 WILD-TYPE    196    189    266
D131V8, multiclass
        clus
vv       CES3 MUTATED CES3 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            1            189
  CLUS_3            2            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CES3 MUTATED        0      0      2      1
  CES3 WILD-TYPE    136    107    181     82
D131V9, multiclass
        clus
vv       CES3 MUTATED CES3 WILD-TYPE
  CLUS_1            0            136
  CLUS_2            0            107
  CLUS_3            2            181
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CES3 MUTATED        2      1      0
  CES3 WILD-TYPE    220    183    103
D131V10, multiclass
        clus
vv       CES3 MUTATED CES3 WILD-TYPE
  CLUS_1            2            220
  CLUS_2            1            183
  CLUS_3            0            103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CES3 MUTATED        0      1      2
  CES3 WILD-TYPE    184    161    157
D131V11, multiclass
        clus
vv       CES3 MUTATED CES3 WILD-TYPE
  CLUS_1            0            184
  CLUS_2            1            161
  CLUS_3            2            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CES3 MUTATED        0      1      2      0
  CES3 WILD-TYPE     90    137    186     89
D131V12, multiclass
        clus
vv       CES3 MUTATED CES3 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            1            137
  CLUS_3            2            186
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(132) Variable = CLEC12A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLEC12A MUTATED        0      0      1      0
  CLEC12A WILD-TYPE     69     43     73     54
D132V1, multiclass
[1] "Remove cluster labels:" "CLEC12A MUTATED"       
clus
  CLEC12A MUTATED CLEC12A WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1825 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-1829        TCGA-14-2554        TCGA-14-3476        TCGA-14-4157 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-15-0742        TCGA-15-1444        TCGA-16-0846        TCGA-16-0861 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-16-1045        TCGA-16-1048        TCGA-19-1390        TCGA-19-1790 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-2619        TCGA-19-2620        TCGA-19-2623        TCGA-19-2624 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-2625        TCGA-19-2629        TCGA-19-2631        TCGA-19-4068 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-26-5139        TCGA-27-1830        TCGA-27-1831        TCGA-27-1832 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-1833        TCGA-27-1834        TCGA-27-1835        TCGA-27-1836 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-1837        TCGA-27-1838        TCGA-27-2518        TCGA-27-2519 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-2521        TCGA-27-2523        TCGA-27-2524        TCGA-27-2526 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-2527        TCGA-27-2528        TCGA-28-1747        TCGA-28-1753 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-2501        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5213        TCGA-28-5214 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-5215        TCGA-28-5216        TCGA-28-5218        TCGA-28-5219 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-5220        TCGA-28-6450        TCGA-32-1970        TCGA-32-1977 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-1982        TCGA-32-1986 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-1991        TCGA-32-2491        TCGA-32-2494        TCGA-32-2495 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-2615        TCGA-32-2632        TCGA-32-2634        TCGA-32-4208 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLEC12A MUTATED        1      0      0      0
  CLEC12A WILD-TYPE     62     50     48     79
D132V2, multiclass
[1] "Remove cluster labels:" "CLEC12A MUTATED"       
clus
  CLEC12A MUTATED CLEC12A WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1825 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-1829        TCGA-14-2554        TCGA-14-3476        TCGA-14-4157 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-15-0742        TCGA-15-1444        TCGA-16-0846        TCGA-16-0861 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-16-1045        TCGA-16-1048        TCGA-19-1390        TCGA-19-1790 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-2619        TCGA-19-2620        TCGA-19-2623        TCGA-19-2624 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-2625        TCGA-19-2629        TCGA-19-2631        TCGA-19-4068 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-26-5139        TCGA-27-1830        TCGA-27-1831        TCGA-27-1832 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-1833        TCGA-27-1834        TCGA-27-1835        TCGA-27-1836 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-1837        TCGA-27-1838        TCGA-27-2518        TCGA-27-2519 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-2521        TCGA-27-2523        TCGA-27-2524        TCGA-27-2526 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-2527        TCGA-27-2528        TCGA-28-1747        TCGA-28-1753 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-2501        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5213        TCGA-28-5214 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-5215        TCGA-28-5216        TCGA-28-5218        TCGA-28-5219 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-5220        TCGA-28-6450        TCGA-32-1970        TCGA-32-1977 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-1982        TCGA-32-1986 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-1991        TCGA-32-2491        TCGA-32-2494        TCGA-32-2495 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-2615        TCGA-32-2632        TCGA-32-2634        TCGA-32-4208 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLEC12A MUTATED        1      0      0      0
  CLEC12A WILD-TYPE     76     93     45     60
D132V3, multiclass
[1] "Remove cluster labels:" "CLEC12A MUTATED"       
clus
  CLEC12A MUTATED CLEC12A WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5953 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-26-5139        TCGA-26-6173        TCGA-26-6174        TCGA-27-1830 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-1831        TCGA-27-1832        TCGA-27-1833        TCGA-27-1834 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-1835        TCGA-27-1836        TCGA-27-1837        TCGA-27-1838 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-2518        TCGA-27-2519        TCGA-27-2521        TCGA-27-2523 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-2524        TCGA-27-2526        TCGA-27-2527        TCGA-27-2528 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2502        TCGA-28-2509 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-2510        TCGA-28-2513        TCGA-28-2514        TCGA-28-5204 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-5207        TCGA-28-5208        TCGA-28-5209        TCGA-28-5211 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-5213        TCGA-28-5214        TCGA-28-5215        TCGA-28-5216 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-5218        TCGA-28-5219        TCGA-28-5220        TCGA-28-6450 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-1970        TCGA-32-1977        TCGA-32-1979        TCGA-32-1980 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-1982        TCGA-32-1986        TCGA-32-1991        TCGA-32-2491 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-2494        TCGA-32-2495        TCGA-32-2615        TCGA-32-2632 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-2634        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CLEC12A MUTATED        0      1      0
  CLEC12A WILD-TYPE    138     60     76
D132V4, multiclass
[1] "Remove cluster labels:" "CLEC12A MUTATED"       
clus
  CLEC12A MUTATED CLEC12A WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5953 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-26-5139        TCGA-26-6173        TCGA-26-6174        TCGA-27-1830 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-1831        TCGA-27-1832        TCGA-27-1833        TCGA-27-1834 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-1835        TCGA-27-1836        TCGA-27-1837        TCGA-27-1838 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-2518        TCGA-27-2519        TCGA-27-2521        TCGA-27-2523 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-27-2524        TCGA-27-2526        TCGA-27-2527        TCGA-27-2528 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2502        TCGA-28-2509 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-2510        TCGA-28-2513        TCGA-28-2514        TCGA-28-5204 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-5207        TCGA-28-5208        TCGA-28-5209        TCGA-28-5211 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-5213        TCGA-28-5214        TCGA-28-5215        TCGA-28-5216 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-28-5218        TCGA-28-5219        TCGA-28-5220        TCGA-28-6450 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-1970        TCGA-32-1977        TCGA-32-1979        TCGA-32-1980 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-1982        TCGA-32-1986        TCGA-32-1991        TCGA-32-2491 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-2494        TCGA-32-2495        TCGA-32-2615        TCGA-32-2632 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-2634        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"CLEC12A WILD-TYPE" "CLEC12A WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CLEC12A MUTATED        3      2      0
  CLEC12A WILD-TYPE    292    479      7
D132V5, multiclass
        clus
vv       CLEC12A MUTATED CLEC12A WILD-TYPE
  CLUS_1               3               292
  CLUS_2               2               479
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLEC12A MUTATED        3      1      0      0
  CLEC12A WILD-TYPE    157    231     64    166
D132V6, multiclass
        clus
vv       CLEC12A MUTATED CLEC12A WILD-TYPE
  CLUS_1               3               157
  CLUS_2               1               231
  CLUS_3               0                64
  CLUS_4               0               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CLEC12A MUTATED        3      1      1
  CLEC12A WILD-TYPE    224    234    191
D132V7, multiclass
        clus
vv       CLEC12A MUTATED CLEC12A WILD-TYPE
  CLUS_1               3               224
  CLUS_2               1               234
  CLUS_3               1               191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CLEC12A MUTATED        2      2      1
  CLEC12A WILD-TYPE    194    188    267
D132V8, multiclass
        clus
vv       CLEC12A MUTATED CLEC12A WILD-TYPE
  CLUS_1               2               194
  CLUS_2               2               188
  CLUS_3               1               267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLEC12A MUTATED        0      3      1      0
  CLEC12A WILD-TYPE    136    104    182     83
D132V9, multiclass
        clus
vv       CLEC12A MUTATED CLEC12A WILD-TYPE
  CLUS_1               0               136
  CLUS_2               3               104
  CLUS_3               1               182
  CLUS_4               0                83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CLEC12A MUTATED        1      1      2
  CLEC12A WILD-TYPE    221    183    101
D132V10, multiclass
        clus
vv       CLEC12A MUTATED CLEC12A WILD-TYPE
  CLUS_1               1               221
  CLUS_2               1               183
  CLUS_3               2               101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CLEC12A MUTATED        1      1      2
  CLEC12A WILD-TYPE    183    161    157
D132V11, multiclass
        clus
vv       CLEC12A MUTATED CLEC12A WILD-TYPE
  CLUS_1               1               183
  CLUS_2               1               161
  CLUS_3               2               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLEC12A MUTATED        0      1      2      1
  CLEC12A WILD-TYPE     90    137    186     88
D132V12, multiclass
        clus
vv       CLEC12A MUTATED CLEC12A WILD-TYPE
  CLUS_1               0                90
  CLUS_2               1               137
  CLUS_3               2               186
  CLUS_4               1                88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(133) Variable = CACNA1S MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CACNA1S MUTATED        2      0      2      3
  CACNA1S WILD-TYPE     67     43     72     51
D133V1, multiclass
        clus
vv       CACNA1S MUTATED CACNA1S WILD-TYPE
  CLUS_1               2                67
  CLUS_2               0                43
  CLUS_3               2                72
  CLUS_4               3                51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CACNA1S MUTATED        1      2      2      2
  CACNA1S WILD-TYPE     62     48     46     77
D133V2, multiclass
        clus
vv       CACNA1S MUTATED CACNA1S WILD-TYPE
  CLUS_1               1                62
  CLUS_2               2                48
  CLUS_3               2                46
  CLUS_4               2                77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CACNA1S MUTATED        2      3      1      0
  CACNA1S WILD-TYPE     75     90     44     60
D133V3, multiclass
        clus
vv       CACNA1S MUTATED CACNA1S WILD-TYPE
  CLUS_1               2                75
  CLUS_2               3                90
  CLUS_3               1                44
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CACNA1S MUTATED        3      1      2
  CACNA1S WILD-TYPE    135     60     74
D133V4, multiclass
        clus
vv       CACNA1S MUTATED CACNA1S WILD-TYPE
  CLUS_1               3               135
  CLUS_2               1                60
  CLUS_3               2                74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CACNA1S MUTATED        4      8      1
  CACNA1S WILD-TYPE    291    473      6
D133V5, multiclass
        clus
vv       CACNA1S MUTATED CACNA1S WILD-TYPE
  CLUS_1               4               291
  CLUS_2               8               473
  CLUS_3               1                 6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CACNA1S MUTATED        5      3      1      1
  CACNA1S WILD-TYPE    155    229     63    165
D133V6, multiclass
        clus
vv       CACNA1S MUTATED CACNA1S WILD-TYPE
  CLUS_1               5               155
  CLUS_2               3               229
  CLUS_3               1                63
  CLUS_4               1               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CACNA1S MUTATED        8      2      3
  CACNA1S WILD-TYPE    219    233    189
D133V7, multiclass
        clus
vv       CACNA1S MUTATED CACNA1S WILD-TYPE
  CLUS_1               8               219
  CLUS_2               2               233
  CLUS_3               3               189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CACNA1S MUTATED        6      2      5
  CACNA1S WILD-TYPE    190    188    263
D133V8, multiclass
        clus
vv       CACNA1S MUTATED CACNA1S WILD-TYPE
  CLUS_1               6               190
  CLUS_2               2               188
  CLUS_3               5               263
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CACNA1S MUTATED        1      3      3      0
  CACNA1S WILD-TYPE    135    104    180     83
D133V9, multiclass
        clus
vv       CACNA1S MUTATED CACNA1S WILD-TYPE
  CLUS_1               1               135
  CLUS_2               3               104
  CLUS_3               3               180
  CLUS_4               0                83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CACNA1S MUTATED        2      3      2
  CACNA1S WILD-TYPE    220    181    101
D133V10, multiclass
        clus
vv       CACNA1S MUTATED CACNA1S WILD-TYPE
  CLUS_1               2               220
  CLUS_2               3               181
  CLUS_3               2               101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CACNA1S MUTATED        2      1      4
  CACNA1S WILD-TYPE    182    161    155
D133V11, multiclass
        clus
vv       CACNA1S MUTATED CACNA1S WILD-TYPE
  CLUS_1               2               182
  CLUS_2               1               161
  CLUS_3               4               155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CACNA1S MUTATED        2      0      4      1
  CACNA1S WILD-TYPE     88    138    184     88
D133V12, multiclass
        clus
vv       CACNA1S MUTATED CACNA1S WILD-TYPE
  CLUS_1               2                88
  CLUS_2               0               138
  CLUS_3               4               184
  CLUS_4               1                88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(134) Variable = SON MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SON MUTATED        1      0      0      0
  SON WILD-TYPE     68     43     74     54
D134V1, multiclass
[1] "Remove cluster labels:" "SON MUTATED"           
clus
  SON MUTATED SON WILD-TYPE 
            1           239 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2558 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0817    TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1833    TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1838    TCGA-27-2518    TCGA-27-2519    TCGA-27-2521    TCGA-27-2523 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-2524    TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-1753    TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5209    TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5218    TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-1977    TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-1991    TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-2632    TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-4210    TCGA-32-4211    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-2572    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4934    TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SON MUTATED        0      0      0      1
  SON WILD-TYPE     63     50     48     78
D134V2, multiclass
[1] "Remove cluster labels:" "SON MUTATED"           
clus
  SON MUTATED SON WILD-TYPE 
            1           239 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2558 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0817    TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1833    TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1838    TCGA-27-2518    TCGA-27-2519    TCGA-27-2521    TCGA-27-2523 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-2524    TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-1753    TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5209    TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5218    TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-1977    TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-1991    TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-2632    TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-4210    TCGA-32-4211    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-2572    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4934    TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SON MUTATED        1      0      0      0
  SON WILD-TYPE     76     93     45     60
D134V3, multiclass
[1] "Remove cluster labels:" "SON MUTATED"           
clus
  SON MUTATED SON WILD-TYPE 
            1           274 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2558    TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2564    TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5408    TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5414    TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5858    TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-6391    TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-6698    TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-08-0386 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0740 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0781    TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0813    TCGA-14-0817    TCGA-14-0862    TCGA-14-0871    TCGA-14-1043 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-1395    TCGA-14-1450    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5954    TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-1439    TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-5135    TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-2519    TCGA-27-2521    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2502 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-2509    TCGA-28-2510    TCGA-28-2513    TCGA-28-2514    TCGA-28-5204 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5207    TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977    TCGA-32-1979 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-2491 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632    TCGA-32-2634 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210    TCGA-32-4211 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-5651    TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-74-6578    TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6664    TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SON MUTATED        0      0      1
  SON WILD-TYPE    138     61     75
D134V4, multiclass
[1] "Remove cluster labels:" "SON MUTATED"           
clus
  SON MUTATED SON WILD-TYPE 
            1           274 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2558    TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2564    TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5408    TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5414    TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5858    TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-6391    TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-6698    TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-08-0386 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0740 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0781    TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0813    TCGA-14-0817    TCGA-14-0862    TCGA-14-0871    TCGA-14-1043 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-1395    TCGA-14-1450    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5954    TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-1439    TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-5135    TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-2519    TCGA-27-2521    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2502 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-2509    TCGA-28-2510    TCGA-28-2513    TCGA-28-2514    TCGA-28-5204 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5207    TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977    TCGA-32-1979 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-2491 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632    TCGA-32-2634 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210    TCGA-32-4211 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-5651    TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-74-6578    TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6664    TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SON MUTATED        2      7      0
  SON WILD-TYPE    293    474      7
D134V5, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           2           293
  CLUS_2           7           474
  CLUS_3           0             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SON MUTATED        4      2      0      2
  SON WILD-TYPE    156    230     64    164
D134V6, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           4           156
  CLUS_2           2           230
  CLUS_3           0            64
  CLUS_4           2           164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SON MUTATED        4      3      2
  SON WILD-TYPE    223    232    190
D134V7, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           4           223
  CLUS_2           3           232
  CLUS_3           2           190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SON MUTATED        3      3      3
  SON WILD-TYPE    193    187    265
D134V8, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           3           193
  CLUS_2           3           187
  CLUS_3           3           265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SON MUTATED        2      2      2      2
  SON WILD-TYPE    134    105    181     81
D134V9, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           2           134
  CLUS_2           2           105
  CLUS_3           2           181
  CLUS_4           2            81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SON MUTATED        3      2      3
  SON WILD-TYPE    219    182    100
D134V10, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           3           219
  CLUS_2           2           182
  CLUS_3           3           100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SON MUTATED        3      1      3
  SON WILD-TYPE    181    161    156
D134V11, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           3           181
  CLUS_2           1           161
  CLUS_3           3           156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SON MUTATED        1      0      3      3
  SON WILD-TYPE     89    138    185     86
D134V12, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           1            89
  CLUS_2           0           138
  CLUS_3           3           185
  CLUS_4           3            86
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(135) Variable = SLC35A2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC35A2 MUTATED        0      1      0      0
  SLC35A2 WILD-TYPE     69     42     74     54
D135V1, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1829 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC35A2 MUTATED        0      1      0      0
  SLC35A2 WILD-TYPE     63     49     48     79
D135V2, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1829 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC35A2 MUTATED        0      1      0      0
  SLC35A2 WILD-TYPE     77     92     45     60
D135V3, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1829        TCGA-14-2554 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC35A2 MUTATED        1      0      0
  SLC35A2 WILD-TYPE    137     61     76
D135V4, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1829        TCGA-14-2554 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC35A2 MUTATED        1      2      0
  SLC35A2 WILD-TYPE    294    479      7
D135V5, multiclass
        clus
vv       SLC35A2 MUTATED SLC35A2 WILD-TYPE
  CLUS_1               1               294
  CLUS_2               2               479
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC35A2 MUTATED        0      1      0      1
  SLC35A2 WILD-TYPE    160    231     64    165
D135V6, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                2               620 
       TCGA-06-0152        TCGA-06-0650        TCGA-06-1804        TCGA-06-1806 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0862        TCGA-14-1043        TCGA-14-1395 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-1450        TCGA-15-1444        TCGA-19-5947        TCGA-19-5950 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-1442        TCGA-26-5132        TCGA-26-5133        TCGA-26-5134 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-5135        TCGA-26-5136        TCGA-26-5139        TCGA-26-6173 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-6174        TCGA-28-2501        TCGA-28-2510        TCGA-28-5204 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5207        TCGA-28-5208        TCGA-28-5209        TCGA-28-5211 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5213        TCGA-28-5214        TCGA-28-5215        TCGA-28-5216 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5218        TCGA-28-5219        TCGA-28-5220        TCGA-28-6450 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-5222        TCGA-41-5651 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-6646        TCGA-74-6573        TCGA-74-6575        TCGA-74-6577 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-74-6578        TCGA-74-6584        TCGA-76-4925        TCGA-76-4926 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6280        TCGA-76-6282 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6283        TCGA-76-6285        TCGA-76-6286        TCGA-76-6656 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6657        TCGA-76-6660        TCGA-76-6661        TCGA-76-6662 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6663        TCGA-76-6664        TCGA-81-5910        TCGA-81-5911 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-87-5896        TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-4943        TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-5394        TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6186        TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6666        TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6670        TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5275        TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5279        TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XA        TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XE        TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64L        TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64S        TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64X        TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A75O        TCGA-DB-A75P        TCGA-DH-5140        TCGA-DH-5141 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5142        TCGA-DH-5143        TCGA-DH-5144        TCGA-DH-A669 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A66B        TCGA-DH-A66D        TCGA-DH-A66F        TCGA-DH-A66G 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A7UR        TCGA-DH-A7US        TCGA-DH-A7UT        TCGA-DH-A7UU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A7UV        TCGA-DU-5847        TCGA-DU-5849        TCGA-DU-5851 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5852        TCGA-DU-5853        TCGA-DU-5854        TCGA-DU-5855 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5870        TCGA-DU-5871        TCGA-DU-5872        TCGA-DU-5874 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6392        TCGA-DU-6393        TCGA-DU-6394        TCGA-DU-6395 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6396        TCGA-DU-6397        TCGA-DU-6399        TCGA-DU-6400 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6401        TCGA-DU-6402        TCGA-DU-6403        TCGA-DU-6404 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6405        TCGA-DU-6406        TCGA-DU-6407        TCGA-DU-6408 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6410        TCGA-DU-6542        TCGA-DU-7006        TCGA-DU-7007 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7008        TCGA-DU-7009        TCGA-DU-7010        TCGA-DU-7011 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015        TCGA-DU-7018 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7298        TCGA-DU-7300        TCGA-DU-7301        TCGA-DU-7302 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309        TCGA-DU-8158 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163        TCGA-DU-8164 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167        TCGA-DU-8168 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS        TCGA-DU-A5TT 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY        TCGA-DU-A6S2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7        TCGA-DU-A6S8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O        TCGA-DU-A76R 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA        TCGA-DU-A7TB 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG        TCGA-DU-A7TJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304        TCGA-E1-5305 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318        TCGA-E1-5319 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5322        TCGA-E1-A7YD        TCGA-E1-A7YE        TCGA-E1-A7YH 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YI        TCGA-E1-A7YJ        TCGA-E1-A7YK        TCGA-E1-A7YL 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YO        TCGA-E1-A7YQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YS        TCGA-E1-A7YU        TCGA-E1-A7YV        TCGA-E1-A7YW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YY        TCGA-E1-A7Z2        TCGA-E1-A7Z3        TCGA-E1-A7Z4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7Z6        TCGA-EZ-7264        TCGA-F6-A8O3        TCGA-F6-A8O4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-5962        TCGA-FG-5963        TCGA-FG-5964        TCGA-FG-5965 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6688        TCGA-FG-6689        TCGA-FG-6690        TCGA-FG-6691 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6692        TCGA-FG-7634        TCGA-FG-7636        TCGA-FG-7637 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643        TCGA-FG-8181 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186        TCGA-FG-8187 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191        TCGA-FG-A4MT 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX        TCGA-FG-A4MY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A60J        TCGA-FG-A60K        TCGA-FG-A60L        TCGA-FG-A6IZ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A6J1        TCGA-FG-A6J3        TCGA-FG-A70Y        TCGA-FG-A70Z 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A710        TCGA-FG-A711        TCGA-FG-A713        TCGA-FG-A87N 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A87Q        TCGA-FN-7833        TCGA-HT-7467        TCGA-HT-7468 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471        TCGA-HT-7472 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475        TCGA-HT-7476 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479        TCGA-HT-7480 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483        TCGA-HT-7485 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603        TCGA-HT-7604 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607        TCGA-HT-7608 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611        TCGA-HT-7616 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677        TCGA-HT-7680 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686        TCGA-HT-7687 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690        TCGA-HT-7691 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694        TCGA-HT-7695 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856        TCGA-HT-7857 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873        TCGA-HT-7874 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879        TCGA-HT-7880 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884        TCGA-HT-7902 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012        TCGA-HT-8013 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019        TCGA-HT-8104 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107        TCGA-HT-8108 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111        TCGA-HT-8113 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8563        TCGA-HT-8564 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A4DS        TCGA-HT-A4DV        TCGA-HT-A5R5        TCGA-HT-A5R7 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5R9        TCGA-HT-A5RA        TCGA-HT-A5RB        TCGA-HT-A5RC 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616        TCGA-HT-A617 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A        TCGA-HT-A61B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A61C        TCGA-HT-A74H        TCGA-HT-A74J        TCGA-HT-A74K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486        TCGA-HW-7487 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491        TCGA-HW-7495 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-8319        TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-A5KJ        TCGA-HW-A5KK        TCGA-HW-A5KL        TCGA-HW-A5KM 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-IK-7675        TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CW        TCGA-QH-A6CX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CY        TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6X5        TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6XC        TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-R8-A6ML        TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A83X        TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A843        TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TU        TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TY        TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U2        TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U9        TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WE        TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WL        TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WP        TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IX        TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7J1        TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7QX        TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7R2        TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7R8        TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A7C4        TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84B        TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84H        TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84M        TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84S        TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RH        TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RM        TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RQ        TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RV        TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8C9        TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CE        TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VV-A86M        TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WH-A86K        TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A85B        TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC35A2 MUTATED        1      1      1
  SLC35A2 WILD-TYPE    226    234    191
D135V7, multiclass
        clus
vv       SLC35A2 MUTATED SLC35A2 WILD-TYPE
  CLUS_1               1               226
  CLUS_2               1               234
  CLUS_3               1               191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC35A2 MUTATED        1      1      1
  SLC35A2 WILD-TYPE    195    189    267
D135V8, multiclass
        clus
vv       SLC35A2 MUTATED SLC35A2 WILD-TYPE
  CLUS_1               1               195
  CLUS_2               1               189
  CLUS_3               1               267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC35A2 MUTATED        0      0      2      0
  SLC35A2 WILD-TYPE    136    107    181     83
D135V9, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                2               507 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75O        TCGA-DB-A75P 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5144        TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A7UT        TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6392        TCGA-DU-6393 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6394        TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6399        TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6403        TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6407        TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7006        TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7010        TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7018        TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7294        TCGA-DU-7298        TCGA-DU-7300        TCGA-DU-7301 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD        TCGA-E1-A7YE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ        TCGA-E1-A7YK 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YO 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU        TCGA-E1-A7YV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2        TCGA-E1-A7Z3 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264        TCGA-F6-A8O3 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963        TCGA-FG-5964 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689        TCGA-FG-6690 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634        TCGA-FG-7636 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K        TCGA-FG-A60L 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3        TCGA-FG-A70Y 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711        TCGA-FG-A713 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833        TCGA-HT-7467 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8563 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8564        TCGA-HT-A4DS        TCGA-HT-A4DV        TCGA-HT-A5R5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RA        TCGA-HT-A5RB 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5RC        TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A617        TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A61B        TCGA-HT-A61C        TCGA-HT-A74H        TCGA-HT-A74K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486        TCGA-HW-7487 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491        TCGA-HW-7495 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-8319        TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-A5KJ        TCGA-HW-A5KK        TCGA-HW-A5KL        TCGA-HW-A5KM 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-IK-7675        TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CX        TCGA-QH-A6CY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4        TCGA-QH-A6X5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M        TCGA-RY-A83X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840        TCGA-RY-A843 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS        TCGA-S9-A6TU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX        TCGA-S9-A6TY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1        TCGA-S9-A6U2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8        TCGA-S9-A6U9 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC35A2 MUTATED        1      1      0
  SLC35A2 WILD-TYPE    221    183    103
D135V10, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                2               507 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75O        TCGA-DB-A75P 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5144        TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A7UT        TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6392        TCGA-DU-6393 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6394        TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6399        TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6403        TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6407        TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7006        TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7010        TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7018        TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7294        TCGA-DU-7298        TCGA-DU-7300        TCGA-DU-7301 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD        TCGA-E1-A7YE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ        TCGA-E1-A7YK 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YO 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU        TCGA-E1-A7YV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2        TCGA-E1-A7Z3 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264        TCGA-F6-A8O3 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963        TCGA-FG-5964 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689        TCGA-FG-6690 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634        TCGA-FG-7636 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K        TCGA-FG-A60L 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3        TCGA-FG-A70Y 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711        TCGA-FG-A713 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833        TCGA-HT-7467 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8563 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8564        TCGA-HT-A4DS        TCGA-HT-A4DV        TCGA-HT-A5R5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RA        TCGA-HT-A5RB 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5RC        TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A617        TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A61B        TCGA-HT-A61C        TCGA-HT-A74H        TCGA-HT-A74K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486        TCGA-HW-7487 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491        TCGA-HW-7495 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-8319        TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-A5KJ        TCGA-HW-A5KK        TCGA-HW-A5KL        TCGA-HW-A5KM 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-IK-7675        TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CX        TCGA-QH-A6CY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4        TCGA-QH-A6X5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M        TCGA-RY-A83X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840        TCGA-RY-A843 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS        TCGA-S9-A6TU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX        TCGA-S9-A6TY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1        TCGA-S9-A6U2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8        TCGA-S9-A6U9 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC35A2 MUTATED        0      2      0
  SLC35A2 WILD-TYPE    184    160    159
D135V11, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                2               503 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA        TCGA-DB-A4XB 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE        TCGA-DB-A4XF 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L        TCGA-DB-A64O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64S        TCGA-DB-A64U 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X        TCGA-DB-A75K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A75L        TCGA-DB-A75O        TCGA-DB-A75P        TCGA-DH-5140 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143        TCGA-DH-5144 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D        TCGA-DH-A66F 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US        TCGA-DH-A7UT 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847        TCGA-DU-5849 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853        TCGA-DU-5854 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871        TCGA-DU-5872 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5874        TCGA-DU-6392        TCGA-DU-6393        TCGA-DU-6394 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397        TCGA-DU-6399 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402        TCGA-DU-6403 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406        TCGA-DU-6407 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542        TCGA-DU-7006 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009        TCGA-DU-7010 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015        TCGA-DU-7018 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7298        TCGA-DU-7300        TCGA-DU-7301        TCGA-DU-7302 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309        TCGA-DU-8158 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163        TCGA-DU-8164 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167        TCGA-DU-8168 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS        TCGA-DU-A5TT 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY        TCGA-DU-A6S2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7        TCGA-DU-A6S8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O        TCGA-DU-A76R 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA        TCGA-DU-A7TB 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG        TCGA-DU-A7TJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304        TCGA-E1-5305 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318        TCGA-E1-5319 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5322        TCGA-E1-A7YD        TCGA-E1-A7YE        TCGA-E1-A7YH 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YI        TCGA-E1-A7YJ        TCGA-E1-A7YK        TCGA-E1-A7YL 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YO        TCGA-E1-A7YQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YS        TCGA-E1-A7YU        TCGA-E1-A7YV        TCGA-E1-A7YW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YY        TCGA-E1-A7Z2        TCGA-E1-A7Z3        TCGA-E1-A7Z4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7Z6        TCGA-EZ-7264        TCGA-F6-A8O3        TCGA-F6-A8O4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-5962        TCGA-FG-5963        TCGA-FG-5964        TCGA-FG-5965 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6688        TCGA-FG-6689        TCGA-FG-6690        TCGA-FG-6691 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6692        TCGA-FG-7634        TCGA-FG-7636        TCGA-FG-7637 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643        TCGA-FG-8181 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186        TCGA-FG-8187 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191        TCGA-FG-A4MT 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX        TCGA-FG-A4MY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A60J        TCGA-FG-A60K        TCGA-FG-A60L        TCGA-FG-A6IZ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A6J1        TCGA-FG-A6J3        TCGA-FG-A70Y        TCGA-FG-A70Z 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A710        TCGA-FG-A711        TCGA-FG-A713        TCGA-FG-A87N 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A87Q        TCGA-FN-7833        TCGA-HT-7467        TCGA-HT-7468 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471        TCGA-HT-7472 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475        TCGA-HT-7476 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479        TCGA-HT-7480 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483        TCGA-HT-7485 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603        TCGA-HT-7604 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607        TCGA-HT-7608 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611        TCGA-HT-7616 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677        TCGA-HT-7680 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686        TCGA-HT-7687 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690        TCGA-HT-7691 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694        TCGA-HT-7695 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856        TCGA-HT-7857 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873        TCGA-HT-7874 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879        TCGA-HT-7880 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884        TCGA-HT-7902 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012        TCGA-HT-8013 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019        TCGA-HT-8104 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107        TCGA-HT-8108 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111        TCGA-HT-8113 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8563        TCGA-HT-8564 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A4DS        TCGA-HT-A4DV        TCGA-HT-A5R5        TCGA-HT-A5R7 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5R9        TCGA-HT-A5RA        TCGA-HT-A5RB        TCGA-HT-A5RC 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616        TCGA-HT-A617 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A        TCGA-HT-A61B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A61C        TCGA-HT-A74H        TCGA-HT-A74K        TCGA-HT-A74L 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A74O        TCGA-HW-7486        TCGA-HW-7487        TCGA-HW-7489 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7490        TCGA-HW-7491        TCGA-HW-7495        TCGA-HW-8319 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-A5KK        TCGA-HW-A5KL        TCGA-HW-A5KM        TCGA-IK-7675 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1        TCGA-P5-A5ET 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW        TCGA-P5-A5EX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0        TCGA-P5-A5F1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A72U        TCGA-P5-A72W 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A72X        TCGA-P5-A72Z        TCGA-P5-A730        TCGA-P5-A731 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A733        TCGA-P5-A735        TCGA-P5-A737        TCGA-P5-A77W 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A77X        TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A65S        TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CS        TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CY        TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6X5        TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6XC        TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-R8-A6ML        TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A83X        TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A843        TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TU        TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TY        TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U2        TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC35A2 MUTATED        1      0      1      0
  SLC35A2 WILD-TYPE     89    138    187     89
D135V12, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                2               503 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA        TCGA-DB-A4XB 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE        TCGA-DB-A4XF 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L        TCGA-DB-A64O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64S        TCGA-DB-A64U 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X        TCGA-DB-A75K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A75L        TCGA-DB-A75O        TCGA-DB-A75P        TCGA-DH-5140 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143        TCGA-DH-5144 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D        TCGA-DH-A66F 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US        TCGA-DH-A7UT 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847        TCGA-DU-5849 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853        TCGA-DU-5854 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871        TCGA-DU-5872 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5874        TCGA-DU-6392        TCGA-DU-6393        TCGA-DU-6394 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397        TCGA-DU-6399 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402        TCGA-DU-6403 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406        TCGA-DU-6407 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542        TCGA-DU-7006 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009        TCGA-DU-7010 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015        TCGA-DU-7018 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7298        TCGA-DU-7300        TCGA-DU-7301        TCGA-DU-7302 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309        TCGA-DU-8158 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163        TCGA-DU-8164 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167        TCGA-DU-8168 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS        TCGA-DU-A5TT 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY        TCGA-DU-A6S2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7        TCGA-DU-A6S8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O        TCGA-DU-A76R 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA        TCGA-DU-A7TB 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG        TCGA-DU-A7TJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304        TCGA-E1-5305 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318        TCGA-E1-5319 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5322        TCGA-E1-A7YD        TCGA-E1-A7YE        TCGA-E1-A7YH 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YI        TCGA-E1-A7YJ        TCGA-E1-A7YK        TCGA-E1-A7YL 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YO        TCGA-E1-A7YQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YS        TCGA-E1-A7YU        TCGA-E1-A7YV        TCGA-E1-A7YW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YY        TCGA-E1-A7Z2        TCGA-E1-A7Z3        TCGA-E1-A7Z4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7Z6        TCGA-EZ-7264        TCGA-F6-A8O3        TCGA-F6-A8O4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-5962        TCGA-FG-5963        TCGA-FG-5964        TCGA-FG-5965 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6688        TCGA-FG-6689        TCGA-FG-6690        TCGA-FG-6691 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6692        TCGA-FG-7634        TCGA-FG-7636        TCGA-FG-7637 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643        TCGA-FG-8181 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186        TCGA-FG-8187 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191        TCGA-FG-A4MT 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX        TCGA-FG-A4MY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A60J        TCGA-FG-A60K        TCGA-FG-A60L        TCGA-FG-A6IZ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A6J1        TCGA-FG-A6J3        TCGA-FG-A70Y        TCGA-FG-A70Z 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A710        TCGA-FG-A711        TCGA-FG-A713        TCGA-FG-A87N 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A87Q        TCGA-FN-7833        TCGA-HT-7467        TCGA-HT-7468 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471        TCGA-HT-7472 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475        TCGA-HT-7476 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479        TCGA-HT-7480 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483        TCGA-HT-7485 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603        TCGA-HT-7604 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607        TCGA-HT-7608 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611        TCGA-HT-7616 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677        TCGA-HT-7680 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686        TCGA-HT-7687 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690        TCGA-HT-7691 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694        TCGA-HT-7695 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856        TCGA-HT-7857 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873        TCGA-HT-7874 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879        TCGA-HT-7880 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884        TCGA-HT-7902 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012        TCGA-HT-8013 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019        TCGA-HT-8104 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107        TCGA-HT-8108 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111        TCGA-HT-8113 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8563        TCGA-HT-8564 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A4DS        TCGA-HT-A4DV        TCGA-HT-A5R5        TCGA-HT-A5R7 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5R9        TCGA-HT-A5RA        TCGA-HT-A5RB        TCGA-HT-A5RC 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616        TCGA-HT-A617 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A        TCGA-HT-A61B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A61C        TCGA-HT-A74H        TCGA-HT-A74K        TCGA-HT-A74L 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A74O        TCGA-HW-7486        TCGA-HW-7487        TCGA-HW-7489 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7490        TCGA-HW-7491        TCGA-HW-7495        TCGA-HW-8319 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-A5KK        TCGA-HW-A5KL        TCGA-HW-A5KM        TCGA-IK-7675 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1        TCGA-P5-A5ET 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW        TCGA-P5-A5EX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0        TCGA-P5-A5F1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A72U        TCGA-P5-A72W 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A72X        TCGA-P5-A72Z        TCGA-P5-A730        TCGA-P5-A731 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A733        TCGA-P5-A735        TCGA-P5-A737        TCGA-P5-A77W 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A77X        TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A65S        TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CS        TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CY        TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6X5        TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6XC        TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-R8-A6ML        TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A83X        TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A843        TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TU        TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TY        TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U2        TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 

Clustering(136) Variable = OR2A12 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR2A12 MUTATED        1      0      1      0
  OR2A12 WILD-TYPE     68     43     73     54
D136V1, multiclass
[1] "Remove cluster labels:" "OR2A12 MUTATED"        
clus
  OR2A12 MUTATED OR2A12 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0871 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5954       TCGA-19-5955 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR2A12 MUTATED        0      0      1      1
  OR2A12 WILD-TYPE     63     50     47     78
D136V2, multiclass
[1] "Remove cluster labels:" "OR2A12 MUTATED"        
clus
  OR2A12 MUTATED OR2A12 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0871 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5954       TCGA-19-5955 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"OR2A12 WILD-TYPE" "OR2A12 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR2A12 MUTATED        0      2      1      0
  OR2A12 WILD-TYPE     77     91     44     60
D136V3, multiclass
        clus
vv       OR2A12 MUTATED OR2A12 WILD-TYPE
  CLUS_1              0               77
  CLUS_2              2               91
  CLUS_3              1               44
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR2A12 MUTATED        1      1      1
  OR2A12 WILD-TYPE    137     60     75
D136V4, multiclass
        clus
vv       OR2A12 MUTATED OR2A12 WILD-TYPE
  CLUS_1              1              137
  CLUS_2              1               60
  CLUS_3              1               75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR2A12 MUTATED        3      4      0
  OR2A12 WILD-TYPE    292    477      7
D136V5, multiclass
        clus
vv       OR2A12 MUTATED OR2A12 WILD-TYPE
  CLUS_1              3              292
  CLUS_2              4              477
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR2A12 MUTATED        2      2      0      1
  OR2A12 WILD-TYPE    158    230     64    165
D136V6, multiclass
        clus
vv       OR2A12 MUTATED OR2A12 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              2              230
  CLUS_3              0               64
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR2A12 MUTATED        1      2      1
  OR2A12 WILD-TYPE    226    233    191
D136V7, multiclass
        clus
vv       OR2A12 MUTATED OR2A12 WILD-TYPE
  CLUS_1              1              226
  CLUS_2              2              233
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR2A12 MUTATED        1      2      1
  OR2A12 WILD-TYPE    195    188    267
D136V8, multiclass
        clus
vv       OR2A12 MUTATED OR2A12 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              2              188
  CLUS_3              1              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR2A12 MUTATED        0      2      1      0
  OR2A12 WILD-TYPE    136    105    182     83
D136V9, multiclass
        clus
vv       OR2A12 MUTATED OR2A12 WILD-TYPE
  CLUS_1              0              136
  CLUS_2              2              105
  CLUS_3              1              182
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR2A12 MUTATED        1      1      1
  OR2A12 WILD-TYPE    221    183    102
D136V10, multiclass
        clus
vv       OR2A12 MUTATED OR2A12 WILD-TYPE
  CLUS_1              1              221
  CLUS_2              1              183
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR2A12 MUTATED        1      1      1
  OR2A12 WILD-TYPE    183    161    158
D136V11, multiclass
        clus
vv       OR2A12 MUTATED OR2A12 WILD-TYPE
  CLUS_1              1              183
  CLUS_2              1              161
  CLUS_3              1              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR2A12 MUTATED        0      2      1      0
  OR2A12 WILD-TYPE     90    136    187     89
D136V12, multiclass
        clus
vv       OR2A12 MUTATED OR2A12 WILD-TYPE
  CLUS_1              0               90
  CLUS_2              2              136
  CLUS_3              1              187
  CLUS_4              0               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(137) Variable = PLCG2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG2 MUTATED        0      0      1      1
  PLCG2 WILD-TYPE     69     43     73     53
D137V1, multiclass
[1] "Remove cluster labels:" "PLCG2 MUTATED"         
clus
  PLCG2 MUTATED PLCG2 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0128      TCGA-06-0129      TCGA-06-0130 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0132      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0152 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0154      TCGA-06-0155      TCGA-06-0157      TCGA-06-0158 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0166      TCGA-06-0167      TCGA-06-0168      TCGA-06-0169 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-0871      TCGA-14-1456 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5954      TCGA-19-5955 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-2502 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-28-2509      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG2 MUTATED        0      0      1      1
  PLCG2 WILD-TYPE     63     50     47     78
D137V2, multiclass
[1] "Remove cluster labels:" "PLCG2 MUTATED"         
clus
  PLCG2 MUTATED PLCG2 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0128      TCGA-06-0129      TCGA-06-0130 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0132      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0152 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0154      TCGA-06-0155      TCGA-06-0157      TCGA-06-0158 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0166      TCGA-06-0167      TCGA-06-0168      TCGA-06-0169 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-0871      TCGA-14-1456 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5954      TCGA-19-5955 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-2502 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-28-2509      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"PLCG2 WILD-TYPE" "PLCG2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG2 MUTATED        0      1      1      1
  PLCG2 WILD-TYPE     77     92     44     59
D137V3, multiclass
        clus
vv       PLCG2 MUTATED PLCG2 WILD-TYPE
  CLUS_1             0              77
  CLUS_2             1              92
  CLUS_3             1              44
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG2 MUTATED        2      0      1
  PLCG2 WILD-TYPE    136     61     75
D137V4, multiclass
        clus
vv       PLCG2 MUTATED PLCG2 WILD-TYPE
  CLUS_1             2             136
  CLUS_2             0              61
  CLUS_3             1              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG2 MUTATED        6      5      0
  PLCG2 WILD-TYPE    289    476      7
D137V5, multiclass
        clus
vv       PLCG2 MUTATED PLCG2 WILD-TYPE
  CLUS_1             6             289
  CLUS_2             5             476
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG2 MUTATED        5      2      2      0
  PLCG2 WILD-TYPE    155    230     62    166
D137V6, multiclass
        clus
vv       PLCG2 MUTATED PLCG2 WILD-TYPE
  CLUS_1             5             155
  CLUS_2             2             230
  CLUS_3             2              62
  CLUS_4             0             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG2 MUTATED        4      1      3
  PLCG2 WILD-TYPE    223    234    189
D137V7, multiclass
        clus
vv       PLCG2 MUTATED PLCG2 WILD-TYPE
  CLUS_1             4             223
  CLUS_2             1             234
  CLUS_3             3             189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG2 MUTATED        3      3      2
  PLCG2 WILD-TYPE    193    187    266
D137V8, multiclass
        clus
vv       PLCG2 MUTATED PLCG2 WILD-TYPE
  CLUS_1             3             193
  CLUS_2             3             187
  CLUS_3             2             266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG2 MUTATED        2      4      2      0
  PLCG2 WILD-TYPE    134    103    181     83
D137V9, multiclass
        clus
vv       PLCG2 MUTATED PLCG2 WILD-TYPE
  CLUS_1             2             134
  CLUS_2             4             103
  CLUS_3             2             181
  CLUS_4             0              83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG2 MUTATED        2      1      5
  PLCG2 WILD-TYPE    220    183     98
D137V10, multiclass
        clus
vv       PLCG2 MUTATED PLCG2 WILD-TYPE
  CLUS_1             2             220
  CLUS_2             1             183
  CLUS_3             5              98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG2 MUTATED        4      1      3
  PLCG2 WILD-TYPE    180    161    156
D137V11, multiclass
        clus
vv       PLCG2 MUTATED PLCG2 WILD-TYPE
  CLUS_1             4             180
  CLUS_2             1             161
  CLUS_3             3             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG2 MUTATED        0      1      3      4
  PLCG2 WILD-TYPE     90    137    185     85
D137V12, multiclass
        clus
vv       PLCG2 MUTATED PLCG2 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             1             137
  CLUS_3             3             185
  CLUS_4             4              85
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(138) Variable = HTT MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTT MUTATED        0      0      0      0
  HTT WILD-TYPE     69     43     74     54
D138V1, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTT MUTATED        0      0      0      0
  HTT WILD-TYPE     63     50     48     79
D138V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTT MUTATED        0      0      0      0
  HTT WILD-TYPE     77     93     45     60
D138V3, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HTT MUTATED        0      0      0
  HTT WILD-TYPE    138     61     76
D138V4, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HTT MUTATED        0      5      0
  HTT WILD-TYPE    295    476      7
D138V5, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           0           295
  CLUS_2           5           476
  CLUS_3           0             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTT MUTATED        1      0      0      4
  HTT WILD-TYPE    159    232     64    162
D138V6, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           1           159
  CLUS_2           0           232
  CLUS_3           0            64
  CLUS_4           4           162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HTT MUTATED        2      0      3
  HTT WILD-TYPE    225    235    189
D138V7, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           2           225
  CLUS_2           0           235
  CLUS_3           3           189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HTT MUTATED        0      2      3
  HTT WILD-TYPE    196    188    265
D138V8, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           0           196
  CLUS_2           2           188
  CLUS_3           3           265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTT MUTATED        0      2      3      0
  HTT WILD-TYPE    136    105    180     83
D138V9, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           0           136
  CLUS_2           2           105
  CLUS_3           3           180
  CLUS_4           0            83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HTT MUTATED        0      2      3
  HTT WILD-TYPE    222    182    100
D138V10, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           0           222
  CLUS_2           2           182
  CLUS_3           3           100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HTT MUTATED        1      1      3
  HTT WILD-TYPE    183    161    156
D138V11, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           1           183
  CLUS_2           1           161
  CLUS_3           3           156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTT MUTATED        0      1      3      1
  HTT WILD-TYPE     90    137    185     88
D138V12, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           0            90
  CLUS_2           1           137
  CLUS_3           3           185
  CLUS_4           1            88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(139) Variable = MAP3K1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        1      1      2      1
  MAP3K1 WILD-TYPE     68     42     72     53
D139V1, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              1               68
  CLUS_2              1               42
  CLUS_3              2               72
  CLUS_4              1               53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        1      1      2      1
  MAP3K1 WILD-TYPE     62     49     46     78
D139V2, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              1               62
  CLUS_2              1               49
  CLUS_3              2               46
  CLUS_4              1               78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        2      2      0      2
  MAP3K1 WILD-TYPE     75     91     45     58
D139V3, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              2               75
  CLUS_2              2               91
  CLUS_3              0               45
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED        2      2      2
  MAP3K1 WILD-TYPE    136     59     74
D139V4, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              2              136
  CLUS_2              2               59
  CLUS_3              2               74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED        6      3      0
  MAP3K1 WILD-TYPE    289    478      7
D139V5, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              6              289
  CLUS_2              3              478
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        2      2      0      0
  MAP3K1 WILD-TYPE    158    230     64    166
D139V6, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              2              230
  CLUS_3              0               64
  CLUS_4              0              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED        5      1      1
  MAP3K1 WILD-TYPE    222    234    191
D139V7, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              5              222
  CLUS_2              1              234
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED        4      2      1
  MAP3K1 WILD-TYPE    192    188    267
D139V8, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              4              192
  CLUS_2              2              188
  CLUS_3              1              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        0      2      1      0
  MAP3K1 WILD-TYPE    136    105    182     83
D139V9, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              0              136
  CLUS_2              2              105
  CLUS_3              1              182
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED        0      1      2
  MAP3K1 WILD-TYPE    222    183    101
D139V10, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              0              222
  CLUS_2              1              183
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED        0      1      2
  MAP3K1 WILD-TYPE    184    161    157
D139V11, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              0              184
  CLUS_2              1              161
  CLUS_3              2              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        0      1      2      0
  MAP3K1 WILD-TYPE     90    137    186     89
D139V12, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              0               90
  CLUS_2              1              137
  CLUS_3              2              186
  CLUS_4              0               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(140) Variable = BBS9 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BBS9 MUTATED        1      1      0      0
  BBS9 WILD-TYPE     68     42     74     54
D140V1, multiclass
[1] "Remove cluster labels:" "BBS9 MUTATED"          
clus
  BBS9 MUTATED BBS9 WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0178     TCGA-06-0184 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2502 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-2509     TCGA-28-2510     TCGA-28-2513     TCGA-28-2514 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-5204     TCGA-28-5207     TCGA-28-5208     TCGA-28-5209 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BBS9 MUTATED        1      1      0      0
  BBS9 WILD-TYPE     62     49     48     79
D140V2, multiclass
[1] "Remove cluster labels:" "BBS9 MUTATED"          
clus
  BBS9 MUTATED BBS9 WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0178     TCGA-06-0184 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2502 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-2509     TCGA-28-2510     TCGA-28-2513     TCGA-28-2514 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-5204     TCGA-28-5207     TCGA-28-5208     TCGA-28-5209 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BBS9 MUTATED        1      0      0      0
  BBS9 WILD-TYPE     76     93     45     60
D140V3, multiclass
[1] "Remove cluster labels:" "BBS9 MUTATED"          
clus
  BBS9 MUTATED BBS9 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0178     TCGA-06-0184 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-1806 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BBS9 MUTATED        1      0      0
  BBS9 WILD-TYPE    137     61     76
D140V4, multiclass
[1] "Remove cluster labels:" "BBS9 MUTATED"          
clus
  BBS9 MUTATED BBS9 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0178     TCGA-06-0184 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-1806 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"BBS9 WILD-TYPE" "BBS9 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BBS9 MUTATED        3      2      0
  BBS9 WILD-TYPE    292    479      7
D140V5, multiclass
        clus
vv       BBS9 MUTATED BBS9 WILD-TYPE
  CLUS_1            3            292
  CLUS_2            2            479
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BBS9 MUTATED        2      0      2      0
  BBS9 WILD-TYPE    158    232     62    166
D140V6, multiclass
        clus
vv       BBS9 MUTATED BBS9 WILD-TYPE
  CLUS_1            2            158
  CLUS_2            0            232
  CLUS_3            2             62
  CLUS_4            0            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BBS9 MUTATED        3      0      1
  BBS9 WILD-TYPE    224    235    191
D140V7, multiclass
        clus
vv       BBS9 MUTATED BBS9 WILD-TYPE
  CLUS_1            3            224
  CLUS_2            0            235
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BBS9 MUTATED        2      1      1
  BBS9 WILD-TYPE    194    189    267
D140V8, multiclass
        clus
vv       BBS9 MUTATED BBS9 WILD-TYPE
  CLUS_1            2            194
  CLUS_2            1            189
  CLUS_3            1            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BBS9 MUTATED        0      2      1      0
  BBS9 WILD-TYPE    136    105    182     83
D140V9, multiclass
        clus
vv       BBS9 MUTATED BBS9 WILD-TYPE
  CLUS_1            0            136
  CLUS_2            2            105
  CLUS_3            1            182
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BBS9 MUTATED        0      1      2
  BBS9 WILD-TYPE    222    183    101
D140V10, multiclass
        clus
vv       BBS9 MUTATED BBS9 WILD-TYPE
  CLUS_1            0            222
  CLUS_2            1            183
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BBS9 MUTATED        1      0      2
  BBS9 WILD-TYPE    183    162    157
D140V11, multiclass
        clus
vv       BBS9 MUTATED BBS9 WILD-TYPE
  CLUS_1            1            183
  CLUS_2            0            162
  CLUS_3            2            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BBS9 MUTATED        0      0      2      1
  BBS9 WILD-TYPE     90    138    186     88
D140V12, multiclass
        clus
vv       BBS9 MUTATED BBS9 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            0            138
  CLUS_3            2            186
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(141) Variable = CSNK2B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSNK2B MUTATED        0      1      0      0
  CSNK2B WILD-TYPE     69     42     74     54
D141V1, multiclass
[1] "Remove cluster labels:" "CSNK2B MUTATED"        
clus
  CSNK2B MUTATED CSNK2B WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSNK2B MUTATED        0      0      0      1
  CSNK2B WILD-TYPE     63     50     48     78
D141V2, multiclass
[1] "Remove cluster labels:" "CSNK2B MUTATED"        
clus
  CSNK2B MUTATED CSNK2B WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSNK2B MUTATED        1      0      0      1
  CSNK2B WILD-TYPE     76     93     45     59
D141V3, multiclass
[1] "Remove cluster labels:" "CSNK2B MUTATED"        
clus
  CSNK2B MUTATED CSNK2B WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5859       TCGA-06-6388 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-41-5651       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-87-5896 
"CSNK2B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CSNK2B MUTATED        1      0      1
  CSNK2B WILD-TYPE    137     61     75
D141V4, multiclass
[1] "Remove cluster labels:" "CSNK2B MUTATED"        
clus
  CSNK2B MUTATED CSNK2B WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5859       TCGA-06-6388 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-41-5651       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-87-5896 
"CSNK2B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CSNK2B MUTATED        1      2      0
  CSNK2B WILD-TYPE    294    479      7
D141V5, multiclass
        clus
vv       CSNK2B MUTATED CSNK2B WILD-TYPE
  CLUS_1              1              294
  CLUS_2              2              479
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSNK2B MUTATED        2      0      0      1
  CSNK2B WILD-TYPE    158    232     64    165
D141V6, multiclass
        clus
vv       CSNK2B MUTATED CSNK2B WILD-TYPE
  CLUS_1              2              158
  CLUS_2              0              232
  CLUS_3              0               64
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CSNK2B MUTATED        1      1      0
  CSNK2B WILD-TYPE    226    234    192
D141V7, multiclass
[1] "Remove cluster labels:" "CSNK2B MUTATED"        
clus
  CSNK2B MUTATED CSNK2B WILD-TYPE 
               2              652 
      TCGA-02-0047       TCGA-02-0055       TCGA-02-2483       TCGA-02-2485 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-02-2486       TCGA-06-0129       TCGA-06-0130       TCGA-06-0132 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0157       TCGA-06-0158       TCGA-06-0168 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0174       TCGA-06-0178       TCGA-06-0184       TCGA-06-0219 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0238       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0649       TCGA-06-0686       TCGA-06-0743       TCGA-06-0744 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0745       TCGA-06-0747       TCGA-06-0749       TCGA-06-0750 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0878       TCGA-06-0882       TCGA-06-1804       TCGA-06-2557 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5859       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0821       TCGA-12-1597       TCGA-12-3650 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-0817       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-2554       TCGA-15-0742       TCGA-15-1444       TCGA-16-0846 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-16-1045       TCGA-19-1390       TCGA-19-2619       TCGA-19-2620 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-2624       TCGA-19-2625       TCGA-19-2629       TCGA-19-5960 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1834       TCGA-27-1835 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-1837       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2528       TCGA-28-1747 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2499       TCGA-28-2509       TCGA-28-2510 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5215 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5220       TCGA-32-1970 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-2615       TCGA-32-2632 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4213       TCGA-32-5222 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-3915       TCGA-41-4097 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-41-5651       TCGA-76-4925       TCGA-76-4926       TCGA-76-4927 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-4928       TCGA-76-4929       TCGA-76-4931       TCGA-76-4932 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75M 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6392       TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7011 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74J 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CW 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RG       TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A8FI       TCGA-W9-A837 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CSNK2B MUTATED        1      0      1
  CSNK2B WILD-TYPE    195    190    267
D141V8, multiclass
[1] "Remove cluster labels:" "CSNK2B MUTATED"        
clus
  CSNK2B MUTATED CSNK2B WILD-TYPE 
               2              652 
      TCGA-02-0047       TCGA-02-0055       TCGA-02-2483       TCGA-02-2485 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-02-2486       TCGA-06-0129       TCGA-06-0130       TCGA-06-0132 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0157       TCGA-06-0158       TCGA-06-0168 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0174       TCGA-06-0178       TCGA-06-0184       TCGA-06-0219 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0238       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0649       TCGA-06-0686       TCGA-06-0743       TCGA-06-0744 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0745       TCGA-06-0747       TCGA-06-0749       TCGA-06-0750 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-0878       TCGA-06-0882       TCGA-06-1804       TCGA-06-2557 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-06-5859       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0821       TCGA-12-1597       TCGA-12-3650 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-0817       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-14-2554       TCGA-15-0742       TCGA-15-1444       TCGA-16-0846 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-16-1045       TCGA-19-1390       TCGA-19-2619       TCGA-19-2620 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-19-2624       TCGA-19-2625       TCGA-19-2629       TCGA-19-5960 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1834       TCGA-27-1835 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-1837       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2528       TCGA-28-1747 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2499       TCGA-28-2509       TCGA-28-2510 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5215 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5220       TCGA-32-1970 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-2615       TCGA-32-2632 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4213       TCGA-32-5222 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-3915       TCGA-41-4097 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-41-5651       TCGA-76-4925       TCGA-76-4926       TCGA-76-4927 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-76-4928       TCGA-76-4929       TCGA-76-4931       TCGA-76-4932 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75M 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6392       TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7011 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74J 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CW 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RG       TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A8FI       TCGA-W9-A837 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSNK2B MUTATED        0      0      0      1
  CSNK2B WILD-TYPE    136    107    183     82
D141V9, multiclass
[1] "Remove cluster labels:" "CSNK2B MUTATED"        
clus
  CSNK2B MUTATED CSNK2B WILD-TYPE 
               1              508 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-7491       TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5F4       TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RG       TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A8FI       TCGA-W9-A837 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CSNK2B MUTATED        1      0      0
  CSNK2B WILD-TYPE    221    184    103
D141V10, multiclass
[1] "Remove cluster labels:" "CSNK2B MUTATED"        
clus
  CSNK2B MUTATED CSNK2B WILD-TYPE 
               1              508 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-7491       TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5F4       TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RG       TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A8FI       TCGA-W9-A837 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CSNK2B MUTATED        0      1      0
  CSNK2B WILD-TYPE    184    161    159
D141V11, multiclass
[1] "Remove cluster labels:" "CSNK2B MUTATED"        
clus
  CSNK2B MUTATED CSNK2B WILD-TYPE 
               1              504 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6UA       TCGA-S9-A6UB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RG       TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A8FI       TCGA-W9-A837 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSNK2B MUTATED        0      1      0      0
  CSNK2B WILD-TYPE     90    137    188     89
D141V12, multiclass
[1] "Remove cluster labels:" "CSNK2B MUTATED"        
clus
  CSNK2B MUTATED CSNK2B WILD-TYPE 
               1              504 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6UA       TCGA-S9-A6UB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RG       TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A8FI       TCGA-W9-A837 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" "CSNK2B WILD-TYPE" 

Clustering(142) Variable = CCDC110 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC110 MUTATED        1      0      0      0
  CCDC110 WILD-TYPE     68     43     74     54
D142V1, multiclass
[1] "Remove cluster labels:" "CCDC110 MUTATED"       
clus
  CCDC110 MUTATED CCDC110 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2483 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-02-2485        TCGA-02-2486        TCGA-06-0122        TCGA-06-0124 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0126        TCGA-06-0128        TCGA-06-0129        TCGA-06-0130 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0132        TCGA-06-0137        TCGA-06-0139        TCGA-06-0140 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0141        TCGA-06-0142        TCGA-06-0145        TCGA-06-0152 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0154        TCGA-06-0155        TCGA-06-0157        TCGA-06-0158 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0166        TCGA-06-0167        TCGA-06-0168        TCGA-06-0169 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0173        TCGA-06-0174        TCGA-06-0178        TCGA-06-0184 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0185        TCGA-06-0188        TCGA-06-0189        TCGA-06-0192 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0195        TCGA-06-0213        TCGA-06-0214        TCGA-06-0216 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0219        TCGA-06-0237        TCGA-06-0238        TCGA-06-0240 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0241        TCGA-06-0644        TCGA-06-0645        TCGA-06-0646 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0648        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-2557 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC110 MUTATED        0      0      0      1
  CCDC110 WILD-TYPE     63     50     48     78
D142V2, multiclass
[1] "Remove cluster labels:" "CCDC110 MUTATED"       
clus
  CCDC110 MUTATED CCDC110 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2483 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-02-2485        TCGA-02-2486        TCGA-06-0122        TCGA-06-0124 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0126        TCGA-06-0128        TCGA-06-0129        TCGA-06-0130 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0132        TCGA-06-0137        TCGA-06-0139        TCGA-06-0140 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0141        TCGA-06-0142        TCGA-06-0145        TCGA-06-0152 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0154        TCGA-06-0155        TCGA-06-0157        TCGA-06-0158 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0166        TCGA-06-0167        TCGA-06-0168        TCGA-06-0169 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0173        TCGA-06-0174        TCGA-06-0178        TCGA-06-0184 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0185        TCGA-06-0188        TCGA-06-0189        TCGA-06-0192 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0195        TCGA-06-0213        TCGA-06-0214        TCGA-06-0216 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0219        TCGA-06-0237        TCGA-06-0238        TCGA-06-0240 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0241        TCGA-06-0644        TCGA-06-0645        TCGA-06-0646 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0648        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-2557 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC110 MUTATED        1      0      1      0
  CCDC110 WILD-TYPE     76     93     44     60
D142V3, multiclass
[1] "Remove cluster labels:" "CCDC110 MUTATED"       
clus
  CCDC110 MUTATED CCDC110 WILD-TYPE 
                2               273 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0137        TCGA-06-0139        TCGA-06-0140 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0141        TCGA-06-0142        TCGA-06-0145        TCGA-06-0151 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0168        TCGA-06-0169 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0173        TCGA-06-0174        TCGA-06-0178        TCGA-06-0184 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0185        TCGA-06-0188        TCGA-06-0189        TCGA-06-0192 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0195        TCGA-06-0213        TCGA-06-0214        TCGA-06-0216 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0219        TCGA-06-0237        TCGA-06-0238        TCGA-06-0240 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0241        TCGA-06-0644        TCGA-06-0645        TCGA-06-0646 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0648        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-1806 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1456        TCGA-14-1823 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-1825        TCGA-14-1829        TCGA-14-2554        TCGA-14-3476 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-4157        TCGA-15-0742        TCGA-15-1444        TCGA-16-0846 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-16-0861        TCGA-16-1045        TCGA-16-1048        TCGA-19-1390 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-1790        TCGA-19-2619        TCGA-19-2620        TCGA-19-2623 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-2624        TCGA-19-2625        TCGA-19-2629        TCGA-19-2631 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-4068        TCGA-19-5947        TCGA-19-5950        TCGA-19-5951 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-5952        TCGA-19-5953        TCGA-19-5954        TCGA-19-5955 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-5958        TCGA-19-5959        TCGA-19-5960        TCGA-26-1439 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-26-1442        TCGA-26-5132        TCGA-26-5133        TCGA-26-5134 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-26-5135        TCGA-26-5136        TCGA-26-5139        TCGA-26-6173 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-26-6174        TCGA-27-1830        TCGA-27-1831        TCGA-27-1832 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-1833        TCGA-27-1834        TCGA-27-1835        TCGA-27-1836 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-1837        TCGA-27-1838        TCGA-27-2518        TCGA-27-2519 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-2521        TCGA-27-2523        TCGA-27-2524        TCGA-27-2526 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-2527        TCGA-27-2528        TCGA-28-1747        TCGA-28-1753 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5211        TCGA-28-5213        TCGA-28-5214 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-5215        TCGA-28-5216        TCGA-28-5218        TCGA-28-5219 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-5220        TCGA-28-6450        TCGA-32-1970        TCGA-32-1977 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-1982        TCGA-32-1986 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-2491        TCGA-32-2494        TCGA-32-2495 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-2615        TCGA-32-2632        TCGA-32-2634        TCGA-32-2638 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-4208        TCGA-32-4209        TCGA-32-4210        TCGA-32-4211 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-4213        TCGA-32-4719        TCGA-32-5222        TCGA-41-2571 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-41-2572        TCGA-41-2573        TCGA-41-2575        TCGA-41-3392 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-41-3393        TCGA-41-3915        TCGA-41-4097        TCGA-41-5651 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-41-6646        TCGA-74-6573        TCGA-74-6575        TCGA-74-6577 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-74-6578        TCGA-74-6584        TCGA-76-4925        TCGA-76-4926 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6280        TCGA-76-6282 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-6283        TCGA-76-6285        TCGA-76-6286        TCGA-76-6656 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-6657        TCGA-76-6660        TCGA-76-6661        TCGA-76-6662 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-6663        TCGA-76-6664        TCGA-81-5910        TCGA-81-5911 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-87-5896 
"CCDC110 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC110 MUTATED        1      0      1
  CCDC110 WILD-TYPE    137     61     75
D142V4, multiclass
[1] "Remove cluster labels:" "CCDC110 MUTATED"       
clus
  CCDC110 MUTATED CCDC110 WILD-TYPE 
                2               273 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0137        TCGA-06-0139        TCGA-06-0140 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0141        TCGA-06-0142        TCGA-06-0145        TCGA-06-0151 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0168        TCGA-06-0169 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0173        TCGA-06-0174        TCGA-06-0178        TCGA-06-0184 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0185        TCGA-06-0188        TCGA-06-0189        TCGA-06-0192 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0195        TCGA-06-0213        TCGA-06-0214        TCGA-06-0216 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0219        TCGA-06-0237        TCGA-06-0238        TCGA-06-0240 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0241        TCGA-06-0644        TCGA-06-0645        TCGA-06-0646 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0648        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-1806 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1456        TCGA-14-1823 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-1825        TCGA-14-1829        TCGA-14-2554        TCGA-14-3476 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-14-4157        TCGA-15-0742        TCGA-15-1444        TCGA-16-0846 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-16-0861        TCGA-16-1045        TCGA-16-1048        TCGA-19-1390 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-1790        TCGA-19-2619        TCGA-19-2620        TCGA-19-2623 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-2624        TCGA-19-2625        TCGA-19-2629        TCGA-19-2631 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-4068        TCGA-19-5947        TCGA-19-5950        TCGA-19-5951 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-5952        TCGA-19-5953        TCGA-19-5954        TCGA-19-5955 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-19-5958        TCGA-19-5959        TCGA-19-5960        TCGA-26-1439 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-26-1442        TCGA-26-5132        TCGA-26-5133        TCGA-26-5134 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-26-5135        TCGA-26-5136        TCGA-26-5139        TCGA-26-6173 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-26-6174        TCGA-27-1830        TCGA-27-1831        TCGA-27-1832 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-1833        TCGA-27-1834        TCGA-27-1835        TCGA-27-1836 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-1837        TCGA-27-1838        TCGA-27-2518        TCGA-27-2519 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-2521        TCGA-27-2523        TCGA-27-2524        TCGA-27-2526 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-27-2527        TCGA-27-2528        TCGA-28-1747        TCGA-28-1753 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5211        TCGA-28-5213        TCGA-28-5214 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-5215        TCGA-28-5216        TCGA-28-5218        TCGA-28-5219 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-28-5220        TCGA-28-6450        TCGA-32-1970        TCGA-32-1977 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-1982        TCGA-32-1986 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-2491        TCGA-32-2494        TCGA-32-2495 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-2615        TCGA-32-2632        TCGA-32-2634        TCGA-32-2638 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-4208        TCGA-32-4209        TCGA-32-4210        TCGA-32-4211 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-32-4213        TCGA-32-4719        TCGA-32-5222        TCGA-41-2571 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-41-2572        TCGA-41-2573        TCGA-41-2575        TCGA-41-3392 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-41-3393        TCGA-41-3915        TCGA-41-4097        TCGA-41-5651 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-41-6646        TCGA-74-6573        TCGA-74-6575        TCGA-74-6577 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-74-6578        TCGA-74-6584        TCGA-76-4925        TCGA-76-4926 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6280        TCGA-76-6282 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-6283        TCGA-76-6285        TCGA-76-6286        TCGA-76-6656 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-6657        TCGA-76-6660        TCGA-76-6661        TCGA-76-6662 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-76-6663        TCGA-76-6664        TCGA-81-5910        TCGA-81-5911 
"CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" "CCDC110 WILD-TYPE" 
       TCGA-87-5896 
"CCDC110 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC110 MUTATED        2      5      0
  CCDC110 WILD-TYPE    293    476      7
D142V5, multiclass
        clus
vv       CCDC110 MUTATED CCDC110 WILD-TYPE
  CLUS_1               2               293
  CLUS_2               5               476
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC110 MUTATED        2      3      0      0
  CCDC110 WILD-TYPE    158    229     64    166
D142V6, multiclass
        clus
vv       CCDC110 MUTATED CCDC110 WILD-TYPE
  CLUS_1               2               158
  CLUS_2               3               229
  CLUS_3               0                64
  CLUS_4               0               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC110 MUTATED        2      2      0
  CCDC110 WILD-TYPE    225    233    192
D142V7, multiclass
        clus
vv       CCDC110 MUTATED CCDC110 WILD-TYPE
  CLUS_1               2               225
  CLUS_2               2               233
  CLUS_3               0               192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC110 MUTATED        1      2      1
  CCDC110 WILD-TYPE    195    188    267
D142V8, multiclass
        clus
vv       CCDC110 MUTATED CCDC110 WILD-TYPE
  CLUS_1               1               195
  CLUS_2               2               188
  CLUS_3               1               267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC110 MUTATED        3      1      0      0
  CCDC110 WILD-TYPE    133    106    183     83
D142V9, multiclass
        clus
vv       CCDC110 MUTATED CCDC110 WILD-TYPE
  CLUS_1               3               133
  CLUS_2               1               106
  CLUS_3               0               183
  CLUS_4               0                83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC110 MUTATED        2      0      2
  CCDC110 WILD-TYPE    220    184    101
D142V10, multiclass
        clus
vv       CCDC110 MUTATED CCDC110 WILD-TYPE
  CLUS_1               2               220
  CLUS_2               0               184
  CLUS_3               2               101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC110 MUTATED        3      1      0
  CCDC110 WILD-TYPE    181    161    159
D142V11, multiclass
        clus
vv       CCDC110 MUTATED CCDC110 WILD-TYPE
  CLUS_1               3               181
  CLUS_2               1               161
  CLUS_3               0               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC110 MUTATED        1      1      0      2
  CCDC110 WILD-TYPE     89    137    188     87
D142V12, multiclass
        clus
vv       CCDC110 MUTATED CCDC110 WILD-TYPE
  CLUS_1               1                89
  CLUS_2               1               137
  CLUS_3               0               188
  CLUS_4               2                87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(143) Variable = ATF7IP2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF7IP2 MUTATED        1      0      2      1
  ATF7IP2 WILD-TYPE     68     43     72     53
D143V1, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               1                68
  CLUS_2               0                43
  CLUS_3               2                72
  CLUS_4               1                53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF7IP2 MUTATED        1      1      1      1
  ATF7IP2 WILD-TYPE     62     49     47     78
D143V2, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               1                62
  CLUS_2               1                49
  CLUS_3               1                47
  CLUS_4               1                78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF7IP2 MUTATED        1      1      0      3
  ATF7IP2 WILD-TYPE     76     92     45     57
D143V3, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               1                76
  CLUS_2               1                92
  CLUS_3               0                45
  CLUS_4               3                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATF7IP2 MUTATED        1      3      1
  ATF7IP2 WILD-TYPE    137     58     75
D143V4, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               1               137
  CLUS_2               3                58
  CLUS_3               1                75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATF7IP2 MUTATED        6      1      1
  ATF7IP2 WILD-TYPE    289    480      6
D143V5, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               6               289
  CLUS_2               1               480
  CLUS_3               1                 6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF7IP2 MUTATED        2      1      1      0
  ATF7IP2 WILD-TYPE    158    231     63    166
D143V6, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               2               158
  CLUS_2               1               231
  CLUS_3               1                63
  CLUS_4               0               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATF7IP2 MUTATED        4      0      0
  ATF7IP2 WILD-TYPE    223    235    192
D143V7, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               4               223
  CLUS_2               0               235
  CLUS_3               0               192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATF7IP2 MUTATED        3      1      0
  ATF7IP2 WILD-TYPE    193    189    268
D143V8, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               3               193
  CLUS_2               1               189
  CLUS_3               0               268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF7IP2 MUTATED        1      1      1      0
  ATF7IP2 WILD-TYPE    135    106    182     83
D143V9, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               1               135
  CLUS_2               1               106
  CLUS_3               1               182
  CLUS_4               0                83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATF7IP2 MUTATED        0      0      3
  ATF7IP2 WILD-TYPE    222    184    100
D143V10, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               0               222
  CLUS_2               0               184
  CLUS_3               3               100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATF7IP2 MUTATED        2      0      1
  ATF7IP2 WILD-TYPE    182    162    158
D143V11, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               2               182
  CLUS_2               0               162
  CLUS_3               1               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF7IP2 MUTATED        0      1      0      2
  ATF7IP2 WILD-TYPE     90    137    188     87
D143V12, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               0                90
  CLUS_2               1               137
  CLUS_3               0               188
  CLUS_4               2                87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(144) Variable = QKI MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QKI MUTATED        3      1      0      1
  QKI WILD-TYPE     66     42     74     53
D144V1, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           3            66
  CLUS_2           1            42
  CLUS_3           0            74
  CLUS_4           1            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QKI MUTATED        4      0      0      1
  QKI WILD-TYPE     59     50     48     78
D144V2, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           4            59
  CLUS_2           0            50
  CLUS_3           0            48
  CLUS_4           1            78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QKI MUTATED        1      2      0      2
  QKI WILD-TYPE     76     91     45     58
D144V3, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           1            76
  CLUS_2           2            91
  CLUS_3           0            45
  CLUS_4           2            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  QKI MUTATED        3      1      1
  QKI WILD-TYPE    135     60     75
D144V4, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           3           135
  CLUS_2           1            60
  CLUS_3           1            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  QKI MUTATED        4      1      1
  QKI WILD-TYPE    291    480      6
D144V5, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           4           291
  CLUS_2           1           480
  CLUS_3           1             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QKI MUTATED        2      1      1      0
  QKI WILD-TYPE    158    231     63    166
D144V6, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           2           158
  CLUS_2           1           231
  CLUS_3           1            63
  CLUS_4           0           166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  QKI MUTATED        2      1      0
  QKI WILD-TYPE    225    234    192
D144V7, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           2           225
  CLUS_2           1           234
  CLUS_3           0           192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  QKI MUTATED        2      1      0
  QKI WILD-TYPE    194    189    268
D144V8, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           2           194
  CLUS_2           1           189
  CLUS_3           0           268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QKI MUTATED        0      0      1      0
  QKI WILD-TYPE    136    107    182     83
D144V9, multiclass
[1] "Remove cluster labels:" "QKI MUTATED"           
clus
  QKI MUTATED QKI WILD-TYPE 
            1           508 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A75L    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7015 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A6S3    TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A76L    TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A7TA    TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-5964    TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74K 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KL 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125    TCGA-KT-A74X    TCGA-KT-A7W1 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW    TCGA-P5-A5EX 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1    TCGA-P5-A5F2 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5F4    TCGA-P5-A5F6    TCGA-P5-A72U    TCGA-P5-A72W    TCGA-P5-A72X 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733    TCGA-P5-A735 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A736    TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X    TCGA-P5-A780 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CX 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6U8    TCGA-S9-A6U9    TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WM    TCGA-S9-A6WN    TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7QX    TCGA-S9-A7QY    TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7R3    TCGA-S9-A7R4    TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A89Z    TCGA-TM-A7C3    TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A7CF    TCGA-TM-A84B    TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84H    TCGA-TM-A84I    TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84O    TCGA-TM-A84Q    TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RK    TCGA-TQ-A7RM    TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RV 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VV-A829    TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-WH-A86K    TCGA-WY-A858    TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-WY-A85C    TCGA-WY-A85D    TCGA-WY-A85E 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  QKI MUTATED        0      1      0
  QKI WILD-TYPE    222    183    103
D144V10, multiclass
[1] "Remove cluster labels:" "QKI MUTATED"           
clus
  QKI MUTATED QKI WILD-TYPE 
            1           508 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A75L    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7015 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A6S3    TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A76L    TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A7TA    TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-5964    TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74K 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KL 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125    TCGA-KT-A74X    TCGA-KT-A7W1 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW    TCGA-P5-A5EX 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1    TCGA-P5-A5F2 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5F4    TCGA-P5-A5F6    TCGA-P5-A72U    TCGA-P5-A72W    TCGA-P5-A72X 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733    TCGA-P5-A735 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A736    TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X    TCGA-P5-A780 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CX 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6U8    TCGA-S9-A6U9    TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WM    TCGA-S9-A6WN    TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7QX    TCGA-S9-A7QY    TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7R3    TCGA-S9-A7R4    TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A89Z    TCGA-TM-A7C3    TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A7CF    TCGA-TM-A84B    TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84H    TCGA-TM-A84I    TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84O    TCGA-TM-A84Q    TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RK    TCGA-TQ-A7RM    TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RV 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VV-A829    TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-WH-A86K    TCGA-WY-A858    TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-WY-A85C    TCGA-WY-A85D    TCGA-WY-A85E 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  QKI MUTATED        0      0      1
  QKI WILD-TYPE    184    162    158
D144V11, multiclass
[1] "Remove cluster labels:" "QKI MUTATED"           
clus
  QKI MUTATED QKI WILD-TYPE 
            1           504 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5281    TCGA-DB-A4X9 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141    TCGA-DH-5142 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B    TCGA-DH-A66D 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US    TCGA-DH-A7UT 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849    TCGA-DU-5851 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855    TCGA-DU-5870 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392    TCGA-DU-6393 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7015    TCGA-DU-7018 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294    TCGA-DU-7298 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302    TCGA-DU-7304 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161    TCGA-DU-8162 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166    TCGA-DU-8167 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG    TCGA-DU-A7TJ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-6692 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1    TCGA-FG-A6J3 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711    TCGA-FG-A713 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467    TCGA-HT-7468 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563    TCGA-HT-8564 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7    TCGA-HT-A5R9 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614    TCGA-HT-A615 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74K    TCGA-HT-A74L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489    TCGA-HW-7490 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-7491    TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-8322    TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-IK-7675    TCGA-IK-8125    TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A72U    TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A731    TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A737    TCGA-P5-A77W 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6UA    TCGA-S9-A6UB 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WI 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN    TCGA-S9-A6WO    TCGA-S9-A6WP 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IX    TCGA-S9-A7IY 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7J3 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY    TCGA-S9-A7QZ    TCGA-S9-A7R1 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4    TCGA-S9-A7R7    TCGA-S9-A7R8 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3    TCGA-TM-A7C4    TCGA-TM-A7C5 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B    TCGA-TM-A84C    TCGA-TM-A84F 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I    TCGA-TM-A84J    TCGA-TM-A84L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q    TCGA-TM-A84R    TCGA-TM-A84S 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH    TCGA-TQ-A7RI 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM    TCGA-TQ-A7RN    TCGA-TQ-A7RO 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS    TCGA-TQ-A7RU 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RV    TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CF 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-VW-A8FI 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858    TCGA-WY-A859    TCGA-WY-A85A 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D    TCGA-WY-A85E 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QKI MUTATED        0      0      1      0
  QKI WILD-TYPE     90    138    187     89
D144V12, multiclass
[1] "Remove cluster labels:" "QKI MUTATED"           
clus
  QKI MUTATED QKI WILD-TYPE 
            1           504 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5281    TCGA-DB-A4X9 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141    TCGA-DH-5142 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B    TCGA-DH-A66D 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US    TCGA-DH-A7UT 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849    TCGA-DU-5851 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855    TCGA-DU-5870 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392    TCGA-DU-6393 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7015    TCGA-DU-7018 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294    TCGA-DU-7298 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302    TCGA-DU-7304 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161    TCGA-DU-8162 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166    TCGA-DU-8167 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG    TCGA-DU-A7TJ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-6692 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1    TCGA-FG-A6J3 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711    TCGA-FG-A713 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467    TCGA-HT-7468 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563    TCGA-HT-8564 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7    TCGA-HT-A5R9 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614    TCGA-HT-A615 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74K    TCGA-HT-A74L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489    TCGA-HW-7490 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-7491    TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-8322    TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-IK-7675    TCGA-IK-8125    TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A72U    TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A731    TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A737    TCGA-P5-A77W 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6UA    TCGA-S9-A6UB 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WI 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN    TCGA-S9-A6WO    TCGA-S9-A6WP 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IX    TCGA-S9-A7IY 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7J3 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY    TCGA-S9-A7QZ    TCGA-S9-A7R1 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4    TCGA-S9-A7R7    TCGA-S9-A7R8 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3    TCGA-TM-A7C4    TCGA-TM-A7C5 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B    TCGA-TM-A84C    TCGA-TM-A84F 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I    TCGA-TM-A84J    TCGA-TM-A84L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q    TCGA-TM-A84R    TCGA-TM-A84S 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH    TCGA-TQ-A7RI 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM    TCGA-TQ-A7RN    TCGA-TQ-A7RO 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS    TCGA-TQ-A7RU 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RV    TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CF 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-VW-A8FI 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858    TCGA-WY-A859    TCGA-WY-A85A 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D    TCGA-WY-A85E 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 

Clustering(145) Variable = CD72 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD72 MUTATED        0      0      0      0
  CD72 WILD-TYPE     69     43     74     54
D145V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD72 MUTATED        0      0      0      0
  CD72 WILD-TYPE     63     50     48     79
D145V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD72 MUTATED        0      0      0      0
  CD72 WILD-TYPE     77     93     45     60
D145V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD72 MUTATED        0      0      0
  CD72 WILD-TYPE    138     61     76
D145V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD72 MUTATED        1      1      1
  CD72 WILD-TYPE    294    480      6
D145V5, multiclass
        clus
vv       CD72 MUTATED CD72 WILD-TYPE
  CLUS_1            1            294
  CLUS_2            1            480
  CLUS_3            1              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD72 MUTATED        1      2      0      0
  CD72 WILD-TYPE    159    230     64    166
D145V6, multiclass
        clus
vv       CD72 MUTATED CD72 WILD-TYPE
  CLUS_1            1            159
  CLUS_2            2            230
  CLUS_3            0             64
  CLUS_4            0            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD72 MUTATED        2      1      0
  CD72 WILD-TYPE    225    234    192
D145V7, multiclass
        clus
vv       CD72 MUTATED CD72 WILD-TYPE
  CLUS_1            2            225
  CLUS_2            1            234
  CLUS_3            0            192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD72 MUTATED        1      2      0
  CD72 WILD-TYPE    195    188    268
D145V8, multiclass
        clus
vv       CD72 MUTATED CD72 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            2            188
  CLUS_3            0            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD72 MUTATED        1      2      0      0
  CD72 WILD-TYPE    135    105    183     83
D145V9, multiclass
        clus
vv       CD72 MUTATED CD72 WILD-TYPE
  CLUS_1            1            135
  CLUS_2            2            105
  CLUS_3            0            183
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD72 MUTATED        1      0      2
  CD72 WILD-TYPE    221    184    101
D145V10, multiclass
        clus
vv       CD72 MUTATED CD72 WILD-TYPE
  CLUS_1            1            221
  CLUS_2            0            184
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD72 MUTATED        3      0      0
  CD72 WILD-TYPE    181    162    159
D145V11, multiclass
        clus
vv       CD72 MUTATED CD72 WILD-TYPE
  CLUS_1            3            181
  CLUS_2            0            162
  CLUS_3            0            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD72 MUTATED        1      0      0      2
  CD72 WILD-TYPE     89    138    188     87
D145V12, multiclass
        clus
vv       CD72 MUTATED CD72 WILD-TYPE
  CLUS_1            1             89
  CLUS_2            0            138
  CLUS_3            0            188
  CLUS_4            2             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(146) Variable = SPINT1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPINT1 MUTATED        1      1      0      1
  SPINT1 WILD-TYPE     68     42     74     53
D146V1, multiclass
        clus
vv       SPINT1 MUTATED SPINT1 WILD-TYPE
  CLUS_1              1               68
  CLUS_2              1               42
  CLUS_3              0               74
  CLUS_4              1               53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPINT1 MUTATED        0      2      0      1
  SPINT1 WILD-TYPE     63     48     48     78
D146V2, multiclass
        clus
vv       SPINT1 MUTATED SPINT1 WILD-TYPE
  CLUS_1              0               63
  CLUS_2              2               48
  CLUS_3              0               48
  CLUS_4              1               78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPINT1 MUTATED        0      2      2      0
  SPINT1 WILD-TYPE     77     91     43     60
D146V3, multiclass
        clus
vv       SPINT1 MUTATED SPINT1 WILD-TYPE
  CLUS_1              0               77
  CLUS_2              2               91
  CLUS_3              2               43
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPINT1 MUTATED        3      0      1
  SPINT1 WILD-TYPE    135     61     75
D146V4, multiclass
        clus
vv       SPINT1 MUTATED SPINT1 WILD-TYPE
  CLUS_1              3              135
  CLUS_2              0               61
  CLUS_3              1               75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPINT1 MUTATED        3      3      0
  SPINT1 WILD-TYPE    292    478      7
D146V5, multiclass
        clus
vv       SPINT1 MUTATED SPINT1 WILD-TYPE
  CLUS_1              3              292
  CLUS_2              3              478
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPINT1 MUTATED        1      2      1      0
  SPINT1 WILD-TYPE    159    230     63    166
D146V6, multiclass
        clus
vv       SPINT1 MUTATED SPINT1 WILD-TYPE
  CLUS_1              1              159
  CLUS_2              2              230
  CLUS_3              1               63
  CLUS_4              0              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPINT1 MUTATED        1      0      2
  SPINT1 WILD-TYPE    226    235    190
D146V7, multiclass
        clus
vv       SPINT1 MUTATED SPINT1 WILD-TYPE
  CLUS_1              1              226
  CLUS_2              0              235
  CLUS_3              2              190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPINT1 MUTATED        1      1      1
  SPINT1 WILD-TYPE    195    189    267
D146V8, multiclass
        clus
vv       SPINT1 MUTATED SPINT1 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              1              189
  CLUS_3              1              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPINT1 MUTATED        0      0      2      0
  SPINT1 WILD-TYPE    136    107    181     83
D146V9, multiclass
[1] "Remove cluster labels:" "SPINT1 MUTATED"        
clus
  SPINT1 MUTATED SPINT1 WILD-TYPE 
               2              507 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A615       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPINT1 MUTATED        1      1      0
  SPINT1 WILD-TYPE    221    183    103
D146V10, multiclass
[1] "Remove cluster labels:" "SPINT1 MUTATED"        
clus
  SPINT1 MUTATED SPINT1 WILD-TYPE 
               2              507 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A615       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPINT1 MUTATED        0      0      2
  SPINT1 WILD-TYPE    184    162    157
D146V11, multiclass
[1] "Remove cluster labels:" "SPINT1 MUTATED"        
clus
  SPINT1 MUTATED SPINT1 WILD-TYPE 
               2              503 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPINT1 MUTATED        0      1      1      0
  SPINT1 WILD-TYPE     90    137    187     89
D146V12, multiclass
[1] "Remove cluster labels:" "SPINT1 MUTATED"        
clus
  SPINT1 MUTATED SPINT1 WILD-TYPE 
               2              503 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" "SPINT1 WILD-TYPE" 

Clustering(147) Variable = MORN5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MORN5 MUTATED        0      0      1      0
  MORN5 WILD-TYPE     69     43     73     54
D147V1, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5139      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2501      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5213      TCGA-28-5214 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3393 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MORN5 MUTATED        0      0      0      1
  MORN5 WILD-TYPE     63     50     48     78
D147V2, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5139      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2501      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5213      TCGA-28-5214 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3393 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MORN5 MUTATED        0      0      1      0
  MORN5 WILD-TYPE     77     93     44     60
D147V3, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5139      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2502      TCGA-28-2509 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5211 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MORN5 MUTATED        1      0      0
  MORN5 WILD-TYPE    137     61     76
D147V4, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5139      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2502      TCGA-28-2509 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5211 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MORN5 MUTATED        2      1      0
  MORN5 WILD-TYPE    293    480      7
D147V5, multiclass
        clus
vv       MORN5 MUTATED MORN5 WILD-TYPE
  CLUS_1             2             293
  CLUS_2             1             480
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MORN5 MUTATED        1      0      0      1
  MORN5 WILD-TYPE    159    232     64    165
D147V6, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              2             620 
     TCGA-06-0152      TCGA-06-0650      TCGA-06-1804      TCGA-06-1806 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0862      TCGA-14-1043      TCGA-14-1395 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-1450      TCGA-15-1444      TCGA-19-5947      TCGA-19-5950 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-6174      TCGA-28-2501      TCGA-28-2510      TCGA-28-5204 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5211 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-5222      TCGA-41-5651 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-87-5896      TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-5394      TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6666      TCGA-CS-6667      TCGA-CS-6669      TCGA-CS-6670 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J      TCGA-HT-A74K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MORN5 MUTATED        0      1      1
  MORN5 WILD-TYPE    227    234    191
D147V7, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              2             652 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1834 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1837      TCGA-27-2519      TCGA-27-2521 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2528 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2499      TCGA-28-2509 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5213 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5220 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1980      TCGA-32-1982      TCGA-32-2615 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4213 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-3915 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4932      TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-5394      TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6666      TCGA-CS-6667      TCGA-CS-6669      TCGA-CS-6670 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J      TCGA-HT-A74K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MORN5 MUTATED        0      0      2
  MORN5 WILD-TYPE    196    190    266
D147V8, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              2             652 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1834 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1837      TCGA-27-2519      TCGA-27-2521 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2528 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2499      TCGA-28-2509 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5213 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5220 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1980      TCGA-32-1982      TCGA-32-2615 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4213 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-3915 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4932      TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-5394      TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6666      TCGA-CS-6667      TCGA-CS-6669      TCGA-CS-6670 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J      TCGA-HT-A74K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MORN5 MUTATED        0      0      1      1
  MORN5 WILD-TYPE    136    107    182     82
D147V9, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              2             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YN      TCGA-E1-A7YO 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MORN5 MUTATED        1      1      0
  MORN5 WILD-TYPE    221    183    103
D147V10, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              2             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YN      TCGA-E1-A7YO 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MORN5 MUTATED        0      1      1
  MORN5 WILD-TYPE    184    161    158
D147V11, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              2             503 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5281 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB      TCGA-DB-A4XC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF      TCGA-DB-A4XG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O      TCGA-DB-A64P 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S      TCGA-DB-A64U 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X      TCGA-DB-A75K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495      TCGA-HW-8319 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MORN5 MUTATED        0      1      1      0
  MORN5 WILD-TYPE     90    137    187     89
D147V12, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              2             503 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5281 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB      TCGA-DB-A4XC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF      TCGA-DB-A4XG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O      TCGA-DB-A64P 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S      TCGA-DB-A64U 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X      TCGA-DB-A75K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495      TCGA-HW-8319 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 

Clustering(148) Variable = EGR1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGR1 MUTATED        2      0      1      0
  EGR1 WILD-TYPE     67     43     73     54
D148V1, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            2             67
  CLUS_2            0             43
  CLUS_3            1             73
  CLUS_4            0             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGR1 MUTATED        1      0      0      2
  EGR1 WILD-TYPE     62     50     48     77
D148V2, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            1             62
  CLUS_2            0             50
  CLUS_3            0             48
  CLUS_4            2             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGR1 MUTATED        1      0      0      2
  EGR1 WILD-TYPE     76     93     45     58
D148V3, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            1             76
  CLUS_2            0             93
  CLUS_3            0             45
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGR1 MUTATED        1      2      0
  EGR1 WILD-TYPE    137     59     76
D148V4, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            1            137
  CLUS_2            2             59
  CLUS_3            0             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGR1 MUTATED        2      3      0
  EGR1 WILD-TYPE    293    478      7
D148V5, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            2            293
  CLUS_2            3            478
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGR1 MUTATED        1      1      0      0
  EGR1 WILD-TYPE    159    231     64    166
D148V6, multiclass
[1] "Remove cluster labels:" "EGR1 MUTATED"          
clus
  EGR1 MUTATED EGR1 WILD-TYPE 
             2            620 
    TCGA-06-0152     TCGA-06-0650     TCGA-06-1804     TCGA-06-1806 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0862     TCGA-14-1043     TCGA-14-1395 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-14-1450     TCGA-15-1444     TCGA-19-5947     TCGA-19-5950 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-26-6173 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-26-6174     TCGA-28-2501     TCGA-28-2510     TCGA-28-5204 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-5222     TCGA-41-5651 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6575     TCGA-74-6577 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-87-5896     TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-4943     TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-5394     TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6670     TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5275     TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5279     TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A75M     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74J 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F4     TCGA-P5-A5F6 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGR1 MUTATED        3      0      1
  EGR1 WILD-TYPE    224    235    191
D148V7, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            3            224
  CLUS_2            0            235
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGR1 MUTATED        2      1      1
  EGR1 WILD-TYPE    194    189    267
D148V8, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            2            194
  CLUS_2            1            189
  CLUS_3            1            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGR1 MUTATED        0      1      1      0
  EGR1 WILD-TYPE    136    106    182     83
D148V9, multiclass
[1] "Remove cluster labels:" "EGR1 MUTATED"          
clus
  EGR1 MUTATED EGR1 WILD-TYPE 
             2            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F4     TCGA-P5-A5F6 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGR1 MUTATED        1      0      1
  EGR1 WILD-TYPE    221    184    102
D148V10, multiclass
[1] "Remove cluster labels:" "EGR1 MUTATED"          
clus
  EGR1 MUTATED EGR1 WILD-TYPE 
             2            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F4     TCGA-P5-A5F6 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGR1 MUTATED        0      1      1
  EGR1 WILD-TYPE    184    161    158
D148V11, multiclass
[1] "Remove cluster labels:" "EGR1 MUTATED"          
clus
  EGR1 MUTATED EGR1 WILD-TYPE 
             2            503 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGR1 MUTATED        0      1      1      0
  EGR1 WILD-TYPE     90    137    187     89
D148V12, multiclass
[1] "Remove cluster labels:" "EGR1 MUTATED"          
clus
  EGR1 MUTATED EGR1 WILD-TYPE 
             2            503 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 

Clustering(149) Variable = OR2A25 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR2A25 MUTATED        2      0      0      0
  OR2A25 WILD-TYPE     67     43     74     54
D149V1, multiclass
[1] "Remove cluster labels:" "OR2A25 MUTATED"        
clus
  OR2A25 MUTATED OR2A25 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2510       TCGA-28-2513 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6285 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR2A25 MUTATED        2      0      0      0
  OR2A25 WILD-TYPE     61     50     48     79
D149V2, multiclass
[1] "Remove cluster labels:" "OR2A25 MUTATED"        
clus
  OR2A25 MUTATED OR2A25 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2510       TCGA-28-2513 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6285 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR2A25 MUTATED        2      0      0      0
  OR2A25 WILD-TYPE     75     93     45     60
D149V3, multiclass
[1] "Remove cluster labels:" "OR2A25 MUTATED"        
clus
  OR2A25 MUTATED OR2A25 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5953 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-26-5139       TCGA-26-6173       TCGA-26-6174       TCGA-27-1830 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2502       TCGA-28-2510 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-87-5896 
"OR2A25 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR2A25 MUTATED        0      0      2
  OR2A25 WILD-TYPE    138     61     74
D149V4, multiclass
[1] "Remove cluster labels:" "OR2A25 MUTATED"        
clus
  OR2A25 MUTATED OR2A25 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5953 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-26-5139       TCGA-26-6173       TCGA-26-6174       TCGA-27-1830 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2502       TCGA-28-2510 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" "OR2A25 WILD-TYPE" 
      TCGA-87-5896 
"OR2A25 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR2A25 MUTATED        3      3      0
  OR2A25 WILD-TYPE    292    478      7
D149V5, multiclass
        clus
vv       OR2A25 MUTATED OR2A25 WILD-TYPE
  CLUS_1              3              292
  CLUS_2              3              478
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR2A25 MUTATED        2      2      0      1
  OR2A25 WILD-TYPE    158    230     64    165
D149V6, multiclass
        clus
vv       OR2A25 MUTATED OR2A25 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              2              230
  CLUS_3              0               64
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR2A25 MUTATED        2      1      2
  OR2A25 WILD-TYPE    225    234    190
D149V7, multiclass
        clus
vv       OR2A25 MUTATED OR2A25 WILD-TYPE
  CLUS_1              2              225
  CLUS_2              1              234
  CLUS_3              2              190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR2A25 MUTATED        2      1      2
  OR2A25 WILD-TYPE    194    189    266
D149V8, multiclass
        clus
vv       OR2A25 MUTATED OR2A25 WILD-TYPE
  CLUS_1              2              194
  CLUS_2              1              189
  CLUS_3              2              266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR2A25 MUTATED        0      1      3      0
  OR2A25 WILD-TYPE    136    106    180     83
D149V9, multiclass
        clus
vv       OR2A25 MUTATED OR2A25 WILD-TYPE
  CLUS_1              0              136
  CLUS_2              1              106
  CLUS_3              3              180
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR2A25 MUTATED        1      2      1
  OR2A25 WILD-TYPE    221    182    102
D149V10, multiclass
        clus
vv       OR2A25 MUTATED OR2A25 WILD-TYPE
  CLUS_1              1              221
  CLUS_2              2              182
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR2A25 MUTATED        2      0      2
  OR2A25 WILD-TYPE    182    162    157
D149V11, multiclass
        clus
vv       OR2A25 MUTATED OR2A25 WILD-TYPE
  CLUS_1              2              182
  CLUS_2              0              162
  CLUS_3              2              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR2A25 MUTATED        1      0      2      1
  OR2A25 WILD-TYPE     89    138    186     88
D149V12, multiclass
        clus
vv       OR2A25 MUTATED OR2A25 WILD-TYPE
  CLUS_1              1               89
  CLUS_2              0              138
  CLUS_3              2              186
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(150) Variable = PDGFRB MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRB MUTATED        0      1      1      0
  PDGFRB WILD-TYPE     69     42     73     54
D150V1, multiclass
[1] "Remove cluster labels:" "PDGFRB MUTATED"        
clus
  PDGFRB MUTATED PDGFRB WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-6450 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRB MUTATED        0      1      0      1
  PDGFRB WILD-TYPE     63     49     48     78
D150V2, multiclass
[1] "Remove cluster labels:" "PDGFRB MUTATED"        
clus
  PDGFRB MUTATED PDGFRB WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-6450 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRB MUTATED        0      1      2      0
  PDGFRB WILD-TYPE     77     92     43     60
D150V3, multiclass
        clus
vv       PDGFRB MUTATED PDGFRB WILD-TYPE
  CLUS_1              0               77
  CLUS_2              1               92
  CLUS_3              2               43
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRB MUTATED        3      0      0
  PDGFRB WILD-TYPE    135     61     76
D150V4, multiclass
        clus
vv       PDGFRB MUTATED PDGFRB WILD-TYPE
  CLUS_1              3              135
  CLUS_2              0               61
  CLUS_3              0               76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRB MUTATED        4      0      0
  PDGFRB WILD-TYPE    291    481      7
D150V5, multiclass
        clus
vv       PDGFRB MUTATED PDGFRB WILD-TYPE
  CLUS_1              4              291
  CLUS_2              0              481
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRB MUTATED        3      0      0      0
  PDGFRB WILD-TYPE    157    232     64    166
D150V6, multiclass
        clus
vv       PDGFRB MUTATED PDGFRB WILD-TYPE
  CLUS_1              3              157
  CLUS_2              0              232
  CLUS_3              0               64
  CLUS_4              0              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRB MUTATED        3      0      0
  PDGFRB WILD-TYPE    224    235    192
D150V7, multiclass
        clus
vv       PDGFRB MUTATED PDGFRB WILD-TYPE
  CLUS_1              3              224
  CLUS_2              0              235
  CLUS_3              0              192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRB MUTATED        3      0      0
  PDGFRB WILD-TYPE    193    190    268
D150V8, multiclass
        clus
vv       PDGFRB MUTATED PDGFRB WILD-TYPE
  CLUS_1              3              193
  CLUS_2              0              190
  CLUS_3              0              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRB MUTATED        1      0      0      0
  PDGFRB WILD-TYPE    135    107    183     83
D150V9, multiclass
[1] "Remove cluster labels:" "PDGFRB MUTATED"        
clus
  PDGFRB MUTATED PDGFRB WILD-TYPE 
               1              508 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRB MUTATED        1      0      0
  PDGFRB WILD-TYPE    221    184    103
D150V10, multiclass
[1] "Remove cluster labels:" "PDGFRB MUTATED"        
clus
  PDGFRB MUTATED PDGFRB WILD-TYPE 
               1              508 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRB MUTATED        1      0      0
  PDGFRB WILD-TYPE    183    162    159
D150V11, multiclass
[1] "Remove cluster labels:" "PDGFRB MUTATED"        
clus
  PDGFRB MUTATED PDGFRB WILD-TYPE 
               1              504 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YE 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRB MUTATED        1      0      0      0
  PDGFRB WILD-TYPE     89    138    188     89
D150V12, multiclass
[1] "Remove cluster labels:" "PDGFRB MUTATED"        
clus
  PDGFRB MUTATED PDGFRB WILD-TYPE 
               1              504 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YE 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" "PDGFRB WILD-TYPE" 

Clustering(151) Variable = MTMR12 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTMR12 MUTATED        0      0      1      1
  MTMR12 WILD-TYPE     69     43     73     53
D151V1, multiclass
[1] "Remove cluster labels:" "MTMR12 MUTATED"        
clus
  MTMR12 MUTATED MTMR12 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-12-0616       TCGA-12-0618 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4926 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTMR12 MUTATED        0      1      0      1
  MTMR12 WILD-TYPE     63     49     48     78
D151V2, multiclass
[1] "Remove cluster labels:" "MTMR12 MUTATED"        
clus
  MTMR12 MUTATED MTMR12 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-12-0616       TCGA-12-0618 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4926 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTMR12 MUTATED        0      2      0      0
  MTMR12 WILD-TYPE     77     91     45     60
D151V3, multiclass
[1] "Remove cluster labels:" "MTMR12 MUTATED"        
clus
  MTMR12 MUTATED MTMR12 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4926 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-87-5896 
"MTMR12 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MTMR12 MUTATED        1      0      1
  MTMR12 WILD-TYPE    137     61     75
D151V4, multiclass
[1] "Remove cluster labels:" "MTMR12 MUTATED"        
clus
  MTMR12 MUTATED MTMR12 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4926 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-87-5896 
"MTMR12 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MTMR12 MUTATED        3      1      0
  MTMR12 WILD-TYPE    292    480      7
D151V5, multiclass
        clus
vv       MTMR12 MUTATED MTMR12 WILD-TYPE
  CLUS_1              3              292
  CLUS_2              1              480
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTMR12 MUTATED        3      0      0      0
  MTMR12 WILD-TYPE    157    232     64    166
D151V6, multiclass
        clus
vv       MTMR12 MUTATED MTMR12 WILD-TYPE
  CLUS_1              3              157
  CLUS_2              0              232
  CLUS_3              0               64
  CLUS_4              0              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MTMR12 MUTATED        4      0      0
  MTMR12 WILD-TYPE    223    235    192
D151V7, multiclass
        clus
vv       MTMR12 MUTATED MTMR12 WILD-TYPE
  CLUS_1              4              223
  CLUS_2              0              235
  CLUS_3              0              192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MTMR12 MUTATED        3      1      0
  MTMR12 WILD-TYPE    193    189    268
D151V8, multiclass
        clus
vv       MTMR12 MUTATED MTMR12 WILD-TYPE
  CLUS_1              3              193
  CLUS_2              1              189
  CLUS_3              0              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTMR12 MUTATED        0      2      0      0
  MTMR12 WILD-TYPE    136    105    183     83
D151V9, multiclass
[1] "Remove cluster labels:" "MTMR12 MUTATED"        
clus
  MTMR12 MUTATED MTMR12 WILD-TYPE 
               2              507 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MTMR12 MUTATED        0      0      2
  MTMR12 WILD-TYPE    222    184    101
D151V10, multiclass
[1] "Remove cluster labels:" "MTMR12 MUTATED"        
clus
  MTMR12 MUTATED MTMR12 WILD-TYPE 
               2              507 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MTMR12 MUTATED        1      0      1
  MTMR12 WILD-TYPE    183    162    158
D151V11, multiclass
[1] "Remove cluster labels:" "MTMR12 MUTATED"        
clus
  MTMR12 MUTATED MTMR12 WILD-TYPE 
               2              503 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393       TCGA-DU-6394 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495       TCGA-HW-8319 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTMR12 MUTATED        0      0      1      1
  MTMR12 WILD-TYPE     90    138    187     88
D151V12, multiclass
[1] "Remove cluster labels:" "MTMR12 MUTATED"        
clus
  MTMR12 MUTATED MTMR12 WILD-TYPE 
               2              503 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393       TCGA-DU-6394 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495       TCGA-HW-8319 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" "MTMR12 WILD-TYPE" 

Clustering(152) Variable = AMBRA1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMBRA1 MUTATED        0      0      0      1
  AMBRA1 WILD-TYPE     69     43     74     53
D152V1, multiclass
[1] "Remove cluster labels:" "AMBRA1 MUTATED"        
clus
  AMBRA1 MUTATED AMBRA1 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-5408       TCGA-06-5410 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMBRA1 MUTATED        0      1      0      0
  AMBRA1 WILD-TYPE     63     49     48     79
D152V2, multiclass
[1] "Remove cluster labels:" "AMBRA1 MUTATED"        
clus
  AMBRA1 MUTATED AMBRA1 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-5408       TCGA-06-5410 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMBRA1 MUTATED        0      1      1      0
  AMBRA1 WILD-TYPE     77     92     44     60
D152V3, multiclass
[1] "Remove cluster labels:" "AMBRA1 MUTATED"        
clus
  AMBRA1 MUTATED AMBRA1 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-5408 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6701       TCGA-08-0386       TCGA-12-0616 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0740       TCGA-14-0781       TCGA-14-0786 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-0787       TCGA-14-0789       TCGA-14-0790       TCGA-14-0813 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-0817       TCGA-14-0862       TCGA-14-0871       TCGA-14-1043 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-1395       TCGA-14-1450       TCGA-14-1456       TCGA-14-1823 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-1825       TCGA-14-1829       TCGA-14-2554       TCGA-14-3476 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-4157       TCGA-15-0742       TCGA-15-1444       TCGA-16-0846 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-16-0861       TCGA-16-1045       TCGA-16-1048       TCGA-19-1390 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-1790       TCGA-19-2619       TCGA-19-2620       TCGA-19-2623 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-2624       TCGA-19-2625       TCGA-19-2629       TCGA-19-2631 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-4068       TCGA-19-5947       TCGA-19-5950       TCGA-19-5951 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-5952       TCGA-19-5953       TCGA-19-5954       TCGA-19-5955 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-87-5896 
"AMBRA1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AMBRA1 MUTATED        2      0      0
  AMBRA1 WILD-TYPE    136     61     76
D152V4, multiclass
[1] "Remove cluster labels:" "AMBRA1 MUTATED"        
clus
  AMBRA1 MUTATED AMBRA1 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-5408 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6701       TCGA-08-0386       TCGA-12-0616 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0740       TCGA-14-0781       TCGA-14-0786 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-0787       TCGA-14-0789       TCGA-14-0790       TCGA-14-0813 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-0817       TCGA-14-0862       TCGA-14-0871       TCGA-14-1043 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-1395       TCGA-14-1450       TCGA-14-1456       TCGA-14-1823 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-1825       TCGA-14-1829       TCGA-14-2554       TCGA-14-3476 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-14-4157       TCGA-15-0742       TCGA-15-1444       TCGA-16-0846 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-16-0861       TCGA-16-1045       TCGA-16-1048       TCGA-19-1390 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-1790       TCGA-19-2619       TCGA-19-2620       TCGA-19-2623 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-2624       TCGA-19-2625       TCGA-19-2629       TCGA-19-2631 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-4068       TCGA-19-5947       TCGA-19-5950       TCGA-19-5951 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-5952       TCGA-19-5953       TCGA-19-5954       TCGA-19-5955 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" "AMBRA1 WILD-TYPE" 
      TCGA-87-5896 
"AMBRA1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AMBRA1 MUTATED        2      4      0
  AMBRA1 WILD-TYPE    293    477      7
D152V5, multiclass
        clus
vv       AMBRA1 MUTATED AMBRA1 WILD-TYPE
  CLUS_1              2              293
  CLUS_2              4              477
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMBRA1 MUTATED        3      2      0      0
  AMBRA1 WILD-TYPE    157    230     64    166
D152V6, multiclass
        clus
vv       AMBRA1 MUTATED AMBRA1 WILD-TYPE
  CLUS_1              3              157
  CLUS_2              2              230
  CLUS_3              0               64
  CLUS_4              0              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AMBRA1 MUTATED        3      2      0
  AMBRA1 WILD-TYPE    224    233    192
D152V7, multiclass
        clus
vv       AMBRA1 MUTATED AMBRA1 WILD-TYPE
  CLUS_1              3              224
  CLUS_2              2              233
  CLUS_3              0              192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AMBRA1 MUTATED        1      4      0
  AMBRA1 WILD-TYPE    195    186    268
D152V8, multiclass
        clus
vv       AMBRA1 MUTATED AMBRA1 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              4              186
  CLUS_3              0              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMBRA1 MUTATED        0      4      0      0
  AMBRA1 WILD-TYPE    136    103    183     83
D152V9, multiclass
        clus
vv       AMBRA1 MUTATED AMBRA1 WILD-TYPE
  CLUS_1              0              136
  CLUS_2              4              103
  CLUS_3              0              183
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AMBRA1 MUTATED        0      0      4
  AMBRA1 WILD-TYPE    222    184     99
D152V10, multiclass
        clus
vv       AMBRA1 MUTATED AMBRA1 WILD-TYPE
  CLUS_1              0              222
  CLUS_2              0              184
  CLUS_3              4               99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AMBRA1 MUTATED        3      0      1
  AMBRA1 WILD-TYPE    181    162    158
D152V11, multiclass
        clus
vv       AMBRA1 MUTATED AMBRA1 WILD-TYPE
  CLUS_1              3              181
  CLUS_2              0              162
  CLUS_3              1              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMBRA1 MUTATED        1      1      1      1
  AMBRA1 WILD-TYPE     89    137    187     88
D152V12, multiclass
        clus
vv       AMBRA1 MUTATED AMBRA1 WILD-TYPE
  CLUS_1              1               89
  CLUS_2              1              137
  CLUS_3              1              187
  CLUS_4              1               88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(153) Variable = BTNL2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BTNL2 MUTATED        2      0      0      0
  BTNL2 WILD-TYPE     67     43     74     54
D153V1, multiclass
[1] "Remove cluster labels:" "BTNL2 MUTATED"         
clus
  BTNL2 MUTATED BTNL2 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0650      TCGA-06-0686 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4209 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BTNL2 MUTATED        0      1      0      1
  BTNL2 WILD-TYPE     63     49     48     78
D153V2, multiclass
[1] "Remove cluster labels:" "BTNL2 MUTATED"         
clus
  BTNL2 MUTATED BTNL2 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0650      TCGA-06-0686 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4209 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BTNL2 MUTATED        1      1      0      0
  BTNL2 WILD-TYPE     76     92     45     60
D153V3, multiclass
[1] "Remove cluster labels:" "BTNL2 MUTATED"         
clus
  BTNL2 MUTATED BTNL2 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0650      TCGA-06-0686 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-87-5896 
"BTNL2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTNL2 MUTATED        1      0      1
  BTNL2 WILD-TYPE    137     61     75
D153V4, multiclass
[1] "Remove cluster labels:" "BTNL2 MUTATED"         
clus
  BTNL2 MUTATED BTNL2 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0650      TCGA-06-0686 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-87-5896 
"BTNL2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTNL2 MUTATED        1      3      0
  BTNL2 WILD-TYPE    294    478      7
D153V5, multiclass
        clus
vv       BTNL2 MUTATED BTNL2 WILD-TYPE
  CLUS_1             1             294
  CLUS_2             3             478
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BTNL2 MUTATED        0      2      0      0
  BTNL2 WILD-TYPE    160    230     64    166
D153V6, multiclass
[1] "Remove cluster labels:" "BTNL2 MUTATED"         
clus
  BTNL2 MUTATED BTNL2 WILD-TYPE 
              2             620 
     TCGA-06-0152      TCGA-06-0650      TCGA-06-1804      TCGA-06-1806 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0862      TCGA-14-1043      TCGA-14-1395 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-14-1450      TCGA-15-1444      TCGA-19-5947      TCGA-19-5950 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-26-6174      TCGA-28-2501      TCGA-28-2510      TCGA-28-5204 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5211 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-5222      TCGA-41-5651 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-87-5896      TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-5394      TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M      TCGA-DB-A75O 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011      TCGA-DU-7012 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TJ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J      TCGA-HT-A74K 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTNL2 MUTATED        1      1      1
  BTNL2 WILD-TYPE    226    234    191
D153V7, multiclass
        clus
vv       BTNL2 MUTATED BTNL2 WILD-TYPE
  CLUS_1             1             226
  CLUS_2             1             234
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTNL2 MUTATED        1      1      1
  BTNL2 WILD-TYPE    195    189    267
D153V8, multiclass
        clus
vv       BTNL2 MUTATED BTNL2 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             1             189
  CLUS_3             1             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BTNL2 MUTATED        1      1      0      0
  BTNL2 WILD-TYPE    135    106    183     83
D153V9, multiclass
[1] "Remove cluster labels:" "BTNL2 MUTATED"         
clus
  BTNL2 MUTATED BTNL2 WILD-TYPE 
              2             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6667 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A75K 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTNL2 MUTATED        1      0      1
  BTNL2 WILD-TYPE    221    184    102
D153V10, multiclass
[1] "Remove cluster labels:" "BTNL2 MUTATED"         
clus
  BTNL2 MUTATED BTNL2 WILD-TYPE 
              2             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6667 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A75K 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTNL2 MUTATED        1      1      0
  BTNL2 WILD-TYPE    183    161    159
D153V11, multiclass
[1] "Remove cluster labels:" "BTNL2 MUTATED"         
clus
  BTNL2 MUTATED BTNL2 WILD-TYPE 
              2             503 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6667 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5281 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB      TCGA-DB-A4XC 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF      TCGA-DB-A4XG 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O      TCGA-DB-A64P 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S      TCGA-DB-A64U 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A75K      TCGA-DB-A75L 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7012 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TJ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495      TCGA-HW-8319 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BTNL2 MUTATED        1      1      0      0
  BTNL2 WILD-TYPE     89    137    188     89
D153V12, multiclass
[1] "Remove cluster labels:" "BTNL2 MUTATED"         
clus
  BTNL2 MUTATED BTNL2 WILD-TYPE 
              2             503 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6667 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5281 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB      TCGA-DB-A4XC 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF      TCGA-DB-A4XG 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O      TCGA-DB-A64P 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S      TCGA-DB-A64U 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A75K      TCGA-DB-A75L 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7012 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TJ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495      TCGA-HW-8319 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" "BTNL2 WILD-TYPE" 

Clustering(154) Variable = RPTN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPTN MUTATED        1      0      2      0
  RPTN WILD-TYPE     68     43     72     54
D154V1, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            1             68
  CLUS_2            0             43
  CLUS_3            2             72
  CLUS_4            0             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPTN MUTATED        1      0      1      1
  RPTN WILD-TYPE     62     50     47     78
D154V2, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            1             62
  CLUS_2            0             50
  CLUS_3            1             47
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPTN MUTATED        1      1      1      1
  RPTN WILD-TYPE     76     92     44     59
D154V3, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            1             76
  CLUS_2            1             92
  CLUS_3            1             44
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPTN MUTATED        3      0      1
  RPTN WILD-TYPE    135     61     75
D154V4, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            3            135
  CLUS_2            0             61
  CLUS_3            1             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPTN MUTATED        4      3      0
  RPTN WILD-TYPE    291    478      7
D154V5, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            4            291
  CLUS_2            3            478
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPTN MUTATED        3      2      0      0
  RPTN WILD-TYPE    157    230     64    166
D154V6, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            3            157
  CLUS_2            2            230
  CLUS_3            0             64
  CLUS_4            0            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPTN MUTATED        3      1      1
  RPTN WILD-TYPE    224    234    191
D154V7, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            3            224
  CLUS_2            1            234
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPTN MUTATED        2      3      0
  RPTN WILD-TYPE    194    187    268
D154V8, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            2            194
  CLUS_2            3            187
  CLUS_3            0            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPTN MUTATED        2      1      1      0
  RPTN WILD-TYPE    134    106    182     83
D154V9, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            2            134
  CLUS_2            1            106
  CLUS_3            1            182
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPTN MUTATED        1      1      2
  RPTN WILD-TYPE    221    183    101
D154V10, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            1            221
  CLUS_2            1            183
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPTN MUTATED        3      0      1
  RPTN WILD-TYPE    181    162    158
D154V11, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            3            181
  CLUS_2            0            162
  CLUS_3            1            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPTN MUTATED        1      1      1      1
  RPTN WILD-TYPE     89    137    187     88
D154V12, multiclass
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  CLUS_1            1             89
  CLUS_2            1            137
  CLUS_3            1            187
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(155) Variable = ZNF148 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF148 MUTATED        0      1      0      0
  ZNF148 WILD-TYPE     69     42     74     54
D155V1, multiclass
[1] "Remove cluster labels:" "ZNF148 MUTATED"        
clus
  ZNF148 MUTATED ZNF148 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF148 MUTATED        0      0      0      1
  ZNF148 WILD-TYPE     63     50     48     78
D155V2, multiclass
[1] "Remove cluster labels:" "ZNF148 MUTATED"        
clus
  ZNF148 MUTATED ZNF148 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF148 MUTATED        1      0      0      0
  ZNF148 WILD-TYPE     76     93     45     60
D155V3, multiclass
[1] "Remove cluster labels:" "ZNF148 MUTATED"        
clus
  ZNF148 MUTATED ZNF148 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5859       TCGA-06-6388 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF148 MUTATED        0      0      1
  ZNF148 WILD-TYPE    138     61     75
D155V4, multiclass
[1] "Remove cluster labels:" "ZNF148 MUTATED"        
clus
  ZNF148 MUTATED ZNF148 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5859       TCGA-06-6388 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF148 MUTATED        0      5      0
  ZNF148 WILD-TYPE    295    476      7
D155V5, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              0              295
  CLUS_2              5              476
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF148 MUTATED        2      0      0      3
  ZNF148 WILD-TYPE    158    232     64    163
D155V6, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              0              232
  CLUS_3              0               64
  CLUS_4              3              163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF148 MUTATED        2      2      1
  ZNF148 WILD-TYPE    225    233    191
D155V7, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              2              225
  CLUS_2              2              233
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF148 MUTATED        1      1      3
  ZNF148 WILD-TYPE    195    189    265
D155V8, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              1              189
  CLUS_3              3              265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF148 MUTATED        1      2      1      0
  ZNF148 WILD-TYPE    135    105    182     83
D155V9, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              1              135
  CLUS_2              2              105
  CLUS_3              1              182
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF148 MUTATED        3      0      1
  ZNF148 WILD-TYPE    219    184    102
D155V10, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              3              219
  CLUS_2              0              184
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF148 MUTATED        1      1      2
  ZNF148 WILD-TYPE    183    161    157
D155V11, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              1              183
  CLUS_2              1              161
  CLUS_3              2              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF148 MUTATED        0      2      2      0
  ZNF148 WILD-TYPE     90    136    186     89
D155V12, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              0               90
  CLUS_2              2              136
  CLUS_3              2              186
  CLUS_4              0               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(156) Variable = GFRA4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GFRA4 MUTATED        0      0      1      1
  GFRA4 WILD-TYPE     69     43     73     53
D156V1, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5959      TCGA-19-5960 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4926 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GFRA4 MUTATED        0      1      0      1
  GFRA4 WILD-TYPE     63     49     48     78
D156V2, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5959      TCGA-19-5960 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4926 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GFRA4 MUTATED        1      1      0      0
  GFRA4 WILD-TYPE     76     92     45     60
D156V3, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5959      TCGA-19-5960 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4926 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-87-5896 
"GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GFRA4 MUTATED        0      0      2
  GFRA4 WILD-TYPE    138     61     74
D156V4, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5959      TCGA-19-5960 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4926 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-87-5896 
"GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GFRA4 MUTATED        2      1      0
  GFRA4 WILD-TYPE    293    480      7
D156V5, multiclass
        clus
vv       GFRA4 MUTATED GFRA4 WILD-TYPE
  CLUS_1             2             293
  CLUS_2             1             480
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GFRA4 MUTATED        2      1      0      0
  GFRA4 WILD-TYPE    158    231     64    166
D156V6, multiclass
        clus
vv       GFRA4 MUTATED GFRA4 WILD-TYPE
  CLUS_1             2             158
  CLUS_2             1             231
  CLUS_3             0              64
  CLUS_4             0             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GFRA4 MUTATED        1      1      0
  GFRA4 WILD-TYPE    226    234    192
D156V7, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              2             652 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1834 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1837      TCGA-27-2519      TCGA-27-2521 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2528 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2499      TCGA-28-2509 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5220 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1980      TCGA-32-1982      TCGA-32-2615 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-3915 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4926      TCGA-76-4927 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4928      TCGA-76-4929      TCGA-76-4931      TCGA-76-4932 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8186      TCGA-FG-8187 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J      TCGA-HT-A74K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GFRA4 MUTATED        1      1      0
  GFRA4 WILD-TYPE    195    189    268
D156V8, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              2             652 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1834 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1837      TCGA-27-2519      TCGA-27-2521 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2528 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2499      TCGA-28-2509 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5220 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1980      TCGA-32-1982      TCGA-32-2615 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-3915 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4926      TCGA-76-4927 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4928      TCGA-76-4929      TCGA-76-4931      TCGA-76-4932 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8186      TCGA-FG-8187 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J      TCGA-HT-A74K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GFRA4 MUTATED        0      1      0      0
  GFRA4 WILD-TYPE    136    106    183     83
D156V9, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              1             508 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GFRA4 MUTATED        1      0      0
  GFRA4 WILD-TYPE    221    184    103
D156V10, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              1             508 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GFRA4 MUTATED        1      0      0
  GFRA4 WILD-TYPE    183    162    159
D156V11, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              1             504 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8186 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U8      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GFRA4 MUTATED        1      0      0      0
  GFRA4 WILD-TYPE     89    138    188     89
D156V12, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              1             504 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8186 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U8      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 

Clustering(157) Variable = SLC6A4 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A4 MUTATED        1      0      0      0
  SLC6A4 WILD-TYPE     68     43     74     54
D157V1, multiclass
[1] "Remove cluster labels:" "SLC6A4 MUTATED"        
clus
  SLC6A4 MUTATED SLC6A4 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A4 MUTATED        1      0      0      0
  SLC6A4 WILD-TYPE     62     50     48     79
D157V2, multiclass
[1] "Remove cluster labels:" "SLC6A4 MUTATED"        
clus
  SLC6A4 MUTATED SLC6A4 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A4 MUTATED        1      0      0      0
  SLC6A4 WILD-TYPE     76     93     45     60
D157V3, multiclass
[1] "Remove cluster labels:" "SLC6A4 MUTATED"        
clus
  SLC6A4 MUTATED SLC6A4 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1048 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A4 MUTATED        1      0      0
  SLC6A4 WILD-TYPE    137     61     76
D157V4, multiclass
[1] "Remove cluster labels:" "SLC6A4 MUTATED"        
clus
  SLC6A4 MUTATED SLC6A4 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1048 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"SLC6A4 WILD-TYPE" "SLC6A4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A4 MUTATED        2      4      0
  SLC6A4 WILD-TYPE    293    477      7
D157V5, multiclass
        clus
vv       SLC6A4 MUTATED SLC6A4 WILD-TYPE
  CLUS_1              2              293
  CLUS_2              4              477
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A4 MUTATED        2      3      0      0
  SLC6A4 WILD-TYPE    158    229     64    166
D157V6, multiclass
        clus
vv       SLC6A4 MUTATED SLC6A4 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              3              229
  CLUS_3              0               64
  CLUS_4              0              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A4 MUTATED        2      3      1
  SLC6A4 WILD-TYPE    225    232    191
D157V7, multiclass
        clus
vv       SLC6A4 MUTATED SLC6A4 WILD-TYPE
  CLUS_1              2              225
  CLUS_2              3              232
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A4 MUTATED        1      4      1
  SLC6A4 WILD-TYPE    195    186    267
D157V8, multiclass
        clus
vv       SLC6A4 MUTATED SLC6A4 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              4              186
  CLUS_3              1              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A4 MUTATED        2      1      2      0
  SLC6A4 WILD-TYPE    134    106    181     83
D157V9, multiclass
        clus
vv       SLC6A4 MUTATED SLC6A4 WILD-TYPE
  CLUS_1              2              134
  CLUS_2              1              106
  CLUS_3              2              181
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A4 MUTATED        3      1      1
  SLC6A4 WILD-TYPE    219    183    102
D157V10, multiclass
        clus
vv       SLC6A4 MUTATED SLC6A4 WILD-TYPE
  CLUS_1              3              219
  CLUS_2              1              183
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A4 MUTATED        2      1      2
  SLC6A4 WILD-TYPE    182    161    157
D157V11, multiclass
        clus
vv       SLC6A4 MUTATED SLC6A4 WILD-TYPE
  CLUS_1              2              182
  CLUS_2              1              161
  CLUS_3              2              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A4 MUTATED        2      0      3      0
  SLC6A4 WILD-TYPE     88    138    185     89
D157V12, multiclass
        clus
vv       SLC6A4 MUTATED SLC6A4 WILD-TYPE
  CLUS_1              2               88
  CLUS_2              0              138
  CLUS_3              3              185
  CLUS_4              0               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(158) Variable = CCDC135 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC135 MUTATED        1      0      0      0
  CCDC135 WILD-TYPE     68     43     74     54
D158V1, multiclass
[1] "Remove cluster labels:" "CCDC135 MUTATED"       
clus
  CCDC135 MUTATED CCDC135 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2483 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-02-2485        TCGA-02-2486        TCGA-06-0122        TCGA-06-0124 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0126        TCGA-06-0128        TCGA-06-0129        TCGA-06-0130 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0132        TCGA-06-0137        TCGA-06-0139        TCGA-06-0140 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0141        TCGA-06-0142        TCGA-06-0145        TCGA-06-0152 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0154        TCGA-06-0155        TCGA-06-0157        TCGA-06-0158 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0166        TCGA-06-0167        TCGA-06-0168        TCGA-06-0169 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0173        TCGA-06-0174        TCGA-06-0178        TCGA-06-0184 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0185        TCGA-06-0188        TCGA-06-0189        TCGA-06-0192 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0195        TCGA-06-0213        TCGA-06-0214        TCGA-06-0216 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0219        TCGA-06-0237        TCGA-06-0238        TCGA-06-0240 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0241        TCGA-06-0644        TCGA-06-0645        TCGA-06-0646 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0648        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-2557 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC135 MUTATED        0      0      0      1
  CCDC135 WILD-TYPE     63     50     48     78
D158V2, multiclass
[1] "Remove cluster labels:" "CCDC135 MUTATED"       
clus
  CCDC135 MUTATED CCDC135 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2483 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-02-2485        TCGA-02-2486        TCGA-06-0122        TCGA-06-0124 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0126        TCGA-06-0128        TCGA-06-0129        TCGA-06-0130 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0132        TCGA-06-0137        TCGA-06-0139        TCGA-06-0140 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0141        TCGA-06-0142        TCGA-06-0145        TCGA-06-0152 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0154        TCGA-06-0155        TCGA-06-0157        TCGA-06-0158 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0166        TCGA-06-0167        TCGA-06-0168        TCGA-06-0169 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0173        TCGA-06-0174        TCGA-06-0178        TCGA-06-0184 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0185        TCGA-06-0188        TCGA-06-0189        TCGA-06-0192 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0195        TCGA-06-0213        TCGA-06-0214        TCGA-06-0216 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0219        TCGA-06-0237        TCGA-06-0238        TCGA-06-0240 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0241        TCGA-06-0644        TCGA-06-0645        TCGA-06-0646 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0648        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-2557 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC135 MUTATED        0      0      1      0
  CCDC135 WILD-TYPE     77     93     44     60
D158V3, multiclass
[1] "Remove cluster labels:" "CCDC135 MUTATED"       
clus
  CCDC135 MUTATED CCDC135 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0137        TCGA-06-0139        TCGA-06-0140 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0141        TCGA-06-0142        TCGA-06-0145        TCGA-06-0151 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0168        TCGA-06-0169 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0173        TCGA-06-0174        TCGA-06-0178        TCGA-06-0184 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0185        TCGA-06-0188        TCGA-06-0189        TCGA-06-0192 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0195        TCGA-06-0213        TCGA-06-0214        TCGA-06-0216 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0219        TCGA-06-0237        TCGA-06-0238        TCGA-06-0240 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0241        TCGA-06-0644        TCGA-06-0645        TCGA-06-0646 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0648        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-1806 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC135 MUTATED        1      0      0
  CCDC135 WILD-TYPE    137     61     76
D158V4, multiclass
[1] "Remove cluster labels:" "CCDC135 MUTATED"       
clus
  CCDC135 MUTATED CCDC135 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0137        TCGA-06-0139        TCGA-06-0140 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0141        TCGA-06-0142        TCGA-06-0145        TCGA-06-0151 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0168        TCGA-06-0169 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0173        TCGA-06-0174        TCGA-06-0178        TCGA-06-0184 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0185        TCGA-06-0188        TCGA-06-0189        TCGA-06-0192 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0195        TCGA-06-0213        TCGA-06-0214        TCGA-06-0216 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0219        TCGA-06-0237        TCGA-06-0238        TCGA-06-0240 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0241        TCGA-06-0644        TCGA-06-0645        TCGA-06-0646 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0648        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-1806 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"CCDC135 WILD-TYPE" "CCDC135 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC135 MUTATED        0      8      0
  CCDC135 WILD-TYPE    295    473      7
D158V5, multiclass
        clus
vv       CCDC135 MUTATED CCDC135 WILD-TYPE
  CLUS_1               0               295
  CLUS_2               8               473
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC135 MUTATED        1      3      0      3
  CCDC135 WILD-TYPE    159    229     64    163
D158V6, multiclass
        clus
vv       CCDC135 MUTATED CCDC135 WILD-TYPE
  CLUS_1               1               159
  CLUS_2               3               229
  CLUS_3               0                64
  CLUS_4               3               163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC135 MUTATED        2      2      3
  CCDC135 WILD-TYPE    225    233    189
D158V7, multiclass
        clus
vv       CCDC135 MUTATED CCDC135 WILD-TYPE
  CLUS_1               2               225
  CLUS_2               2               233
  CLUS_3               3               189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC135 MUTATED        0      2      5
  CCDC135 WILD-TYPE    196    188    263
D158V8, multiclass
        clus
vv       CCDC135 MUTATED CCDC135 WILD-TYPE
  CLUS_1               0               196
  CLUS_2               2               188
  CLUS_3               5               263
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC135 MUTATED        1      2      2      2
  CCDC135 WILD-TYPE    135    105    181     81
D158V9, multiclass
        clus
vv       CCDC135 MUTATED CCDC135 WILD-TYPE
  CLUS_1               1               135
  CLUS_2               2               105
  CLUS_3               2               181
  CLUS_4               2                81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC135 MUTATED        3      3      1
  CCDC135 WILD-TYPE    219    181    102
D158V10, multiclass
        clus
vv       CCDC135 MUTATED CCDC135 WILD-TYPE
  CLUS_1               3               219
  CLUS_2               3               181
  CLUS_3               1               102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC135 MUTATED        2      2      3
  CCDC135 WILD-TYPE    182    160    156
D158V11, multiclass
        clus
vv       CCDC135 MUTATED CCDC135 WILD-TYPE
  CLUS_1               2               182
  CLUS_2               2               160
  CLUS_3               3               156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC135 MUTATED        1      2      4      0
  CCDC135 WILD-TYPE     89    136    184     89
D158V12, multiclass
        clus
vv       CCDC135 MUTATED CCDC135 WILD-TYPE
  CLUS_1               1                89
  CLUS_2               2               136
  CLUS_3               4               184
  CLUS_4               0                89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(159) Variable = RUVBL2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RUVBL2 MUTATED        0      0      2      0
  RUVBL2 WILD-TYPE     69     43     72     54
D159V1, multiclass
[1] "Remove cluster labels:" "RUVBL2 MUTATED"        
clus
  RUVBL2 MUTATED RUVBL2 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-2491 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RUVBL2 MUTATED        0      0      2      0
  RUVBL2 WILD-TYPE     63     50     46     79
D159V2, multiclass
[1] "Remove cluster labels:" "RUVBL2 MUTATED"        
clus
  RUVBL2 MUTATED RUVBL2 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-2491 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RUVBL2 MUTATED        1      0      0      1
  RUVBL2 WILD-TYPE     76     93     45     59
D159V3, multiclass
[1] "Remove cluster labels:" "RUVBL2 MUTATED"        
clus
  RUVBL2 MUTATED RUVBL2 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-87-5896 
"RUVBL2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RUVBL2 MUTATED        1      1      0
  RUVBL2 WILD-TYPE    137     60     76
D159V4, multiclass
[1] "Remove cluster labels:" "RUVBL2 MUTATED"        
clus
  RUVBL2 MUTATED RUVBL2 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-87-5896 
"RUVBL2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RUVBL2 MUTATED        3      1      0
  RUVBL2 WILD-TYPE    292    480      7
D159V5, multiclass
        clus
vv       RUVBL2 MUTATED RUVBL2 WILD-TYPE
  CLUS_1              3              292
  CLUS_2              1              480
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RUVBL2 MUTATED        1      1      0      0
  RUVBL2 WILD-TYPE    159    231     64    166
D159V6, multiclass
[1] "Remove cluster labels:" "RUVBL2 MUTATED"        
clus
  RUVBL2 MUTATED RUVBL2 WILD-TYPE 
               2              620 
      TCGA-06-0152       TCGA-06-0650       TCGA-06-1804       TCGA-06-1806 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0862       TCGA-14-1043       TCGA-14-1395 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-1450       TCGA-15-1444       TCGA-19-5947       TCGA-19-5950 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-6174       TCGA-28-2501       TCGA-28-2510       TCGA-28-5204 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5211 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-5222       TCGA-41-5651 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-87-5896       TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-4943       TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-5394       TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6186       TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6666       TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6670       TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5275       TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5279       TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A4XA       TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A4XE       TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64L       TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64R       TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64W       TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A75M       TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393       TCGA-DU-6394 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7011       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7873       TCGA-HT-7874 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74J       TCGA-HT-A74K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CW       TCGA-QH-A6CX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RUVBL2 MUTATED        1      1      0
  RUVBL2 WILD-TYPE    226    234    192
D159V7, multiclass
[1] "Remove cluster labels:" "RUVBL2 MUTATED"        
clus
  RUVBL2 MUTATED RUVBL2 WILD-TYPE 
               2              652 
      TCGA-02-0047       TCGA-02-0055       TCGA-02-2483       TCGA-02-2485 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-02-2486       TCGA-06-0129       TCGA-06-0130       TCGA-06-0132 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0157       TCGA-06-0158       TCGA-06-0168 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0174       TCGA-06-0178       TCGA-06-0184       TCGA-06-0219 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0238       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0649       TCGA-06-0686       TCGA-06-0743       TCGA-06-0744 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0745       TCGA-06-0747       TCGA-06-0749       TCGA-06-0750 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0878       TCGA-06-0882       TCGA-06-1804       TCGA-06-2557 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-08-0386       TCGA-12-0616 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0821       TCGA-12-1597 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-5299       TCGA-14-0781       TCGA-14-0787       TCGA-14-0789 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0817       TCGA-14-1823       TCGA-14-1825 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-15-0742       TCGA-15-1444 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-1045       TCGA-19-1390       TCGA-19-2619 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1834 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1837       TCGA-27-2519       TCGA-27-2521 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2528 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2499       TCGA-28-2509 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5213 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5220 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1980       TCGA-32-1982       TCGA-32-2615 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4213 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-3915 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-4932       TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-4943       TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-5394       TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6186       TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6666       TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6670       TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5275       TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5279       TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A4XA       TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A4XE       TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64L       TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64R       TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64W       TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A75M       TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393       TCGA-DU-6394 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7011       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7873       TCGA-HT-7874 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74J       TCGA-HT-A74K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CW       TCGA-QH-A6CX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RUVBL2 MUTATED        1      1      0
  RUVBL2 WILD-TYPE    195    189    268
D159V8, multiclass
[1] "Remove cluster labels:" "RUVBL2 MUTATED"        
clus
  RUVBL2 MUTATED RUVBL2 WILD-TYPE 
               2              652 
      TCGA-02-0047       TCGA-02-0055       TCGA-02-2483       TCGA-02-2485 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-02-2486       TCGA-06-0129       TCGA-06-0130       TCGA-06-0132 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0157       TCGA-06-0158       TCGA-06-0168 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0174       TCGA-06-0178       TCGA-06-0184       TCGA-06-0219 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0238       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0649       TCGA-06-0686       TCGA-06-0743       TCGA-06-0744 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0745       TCGA-06-0747       TCGA-06-0749       TCGA-06-0750 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-0878       TCGA-06-0882       TCGA-06-1804       TCGA-06-2557 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-08-0386       TCGA-12-0616 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0821       TCGA-12-1597 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-12-5299       TCGA-14-0781       TCGA-14-0787       TCGA-14-0789 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0817       TCGA-14-1823       TCGA-14-1825 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-15-0742       TCGA-15-1444 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-1045       TCGA-19-1390       TCGA-19-2619 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1834 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1837       TCGA-27-2519       TCGA-27-2521 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2528 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2499       TCGA-28-2509 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5213 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5220 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1980       TCGA-32-1982       TCGA-32-2615 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4213 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-3915 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-76-4932       TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-4943       TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-5394       TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6186       TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6666       TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6670       TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5275       TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5279       TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A4XA       TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A4XE       TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64L       TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64R       TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64W       TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A75M       TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393       TCGA-DU-6394 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7011       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7873       TCGA-HT-7874 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74J       TCGA-HT-A74K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CW       TCGA-QH-A6CX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RUVBL2 MUTATED        2      0      0      0
  RUVBL2 WILD-TYPE    134    107    183     83
D159V9, multiclass
[1] "Remove cluster labels:" "RUVBL2 MUTATED"        
clus
  RUVBL2 MUTATED RUVBL2 WILD-TYPE 
               2              507 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7873 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RUVBL2 MUTATED        1      0      1
  RUVBL2 WILD-TYPE    221    184    102
D159V10, multiclass
[1] "Remove cluster labels:" "RUVBL2 MUTATED"        
clus
  RUVBL2 MUTATED RUVBL2 WILD-TYPE 
               2              507 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7873 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RUVBL2 MUTATED        1      1      0
  RUVBL2 WILD-TYPE    183    161    159
D159V11, multiclass
[1] "Remove cluster labels:" "RUVBL2 MUTATED"        
clus
  RUVBL2 MUTATED RUVBL2 WILD-TYPE 
               2              503 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7873       TCGA-HT-7874 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495       TCGA-HW-8319 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RUVBL2 MUTATED        0      1      0      1
  RUVBL2 WILD-TYPE     90    137    188     88
D159V12, multiclass
[1] "Remove cluster labels:" "RUVBL2 MUTATED"        
clus
  RUVBL2 MUTATED RUVBL2 WILD-TYPE 
               2              503 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7873       TCGA-HT-7874 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495       TCGA-HW-8319 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" "RUVBL2 WILD-TYPE" 

Clustering(160) Variable = PYGL MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PYGL MUTATED        0      0      1      0
  PYGL WILD-TYPE     69     43     73     54
D160V1, multiclass
[1] "Remove cluster labels:" "PYGL MUTATED"          
clus
  PYGL MUTATED PYGL WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0789 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PYGL MUTATED        0      0      1      0
  PYGL WILD-TYPE     63     50     47     79
D160V2, multiclass
[1] "Remove cluster labels:" "PYGL MUTATED"          
clus
  PYGL MUTATED PYGL WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0789 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PYGL MUTATED        0      1      0      0
  PYGL WILD-TYPE     77     92     45     60
D160V3, multiclass
[1] "Remove cluster labels:" "PYGL MUTATED"          
clus
  PYGL MUTATED PYGL WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0789     TCGA-14-0790 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PYGL MUTATED        0      0      1
  PYGL WILD-TYPE    138     61     75
D160V4, multiclass
[1] "Remove cluster labels:" "PYGL MUTATED"          
clus
  PYGL MUTATED PYGL WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0789     TCGA-14-0790 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" "PYGL WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"PYGL WILD-TYPE" "PYGL WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PYGL MUTATED        1      3      0
  PYGL WILD-TYPE    294    478      7
D160V5, multiclass
        clus
vv       PYGL MUTATED PYGL WILD-TYPE
  CLUS_1            1            294
  CLUS_2            3            478
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PYGL MUTATED        1      1      0      1
  PYGL WILD-TYPE    159    231     64    165
D160V6, multiclass
        clus
vv       PYGL MUTATED PYGL WILD-TYPE
  CLUS_1            1            159
  CLUS_2            1            231
  CLUS_3            0             64
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PYGL MUTATED        2      1      1
  PYGL WILD-TYPE    225    234    191
D160V7, multiclass
        clus
vv       PYGL MUTATED PYGL WILD-TYPE
  CLUS_1            2            225
  CLUS_2            1            234
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PYGL MUTATED        1      1      2
  PYGL WILD-TYPE    195    189    266
D160V8, multiclass
        clus
vv       PYGL MUTATED PYGL WILD-TYPE
  CLUS_1            1            195
  CLUS_2            1            189
  CLUS_3            2            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PYGL MUTATED        0      1      1      1
  PYGL WILD-TYPE    136    106    182     82
D160V9, multiclass
        clus
vv       PYGL MUTATED PYGL WILD-TYPE
  CLUS_1            0            136
  CLUS_2            1            106
  CLUS_3            1            182
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PYGL MUTATED        1      1      1
  PYGL WILD-TYPE    221    183    102
D160V10, multiclass
        clus
vv       PYGL MUTATED PYGL WILD-TYPE
  CLUS_1            1            221
  CLUS_2            1            183
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PYGL MUTATED        0      1      2
  PYGL WILD-TYPE    184    161    157
D160V11, multiclass
        clus
vv       PYGL MUTATED PYGL WILD-TYPE
  CLUS_1            0            184
  CLUS_2            1            161
  CLUS_3            2            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PYGL MUTATED        0      1      2      0
  PYGL WILD-TYPE     90    137    186     89
D160V12, multiclass
        clus
vv       PYGL MUTATED PYGL WILD-TYPE
  CLUS_1            0             90
  CLUS_2            1            137
  CLUS_3            2            186
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(161) Variable = ASXL2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASXL2 MUTATED        0      0      0      0
  ASXL2 WILD-TYPE     69     43     74     54
D161V1, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASXL2 MUTATED        0      0      0      0
  ASXL2 WILD-TYPE     63     50     48     79
D161V2, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASXL2 MUTATED        0      0      0      0
  ASXL2 WILD-TYPE     77     93     45     60
D161V3, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASXL2 MUTATED        0      0      0
  ASXL2 WILD-TYPE    138     61     76
D161V4, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASXL2 MUTATED        0      3      0
  ASXL2 WILD-TYPE    295    478      7
D161V5, multiclass
        clus
vv       ASXL2 MUTATED ASXL2 WILD-TYPE
  CLUS_1             0             295
  CLUS_2             3             478
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASXL2 MUTATED        1      0      0      2
  ASXL2 WILD-TYPE    159    232     64    164
D161V6, multiclass
        clus
vv       ASXL2 MUTATED ASXL2 WILD-TYPE
  CLUS_1             1             159
  CLUS_2             0             232
  CLUS_3             0              64
  CLUS_4             2             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASXL2 MUTATED        1      1      1
  ASXL2 WILD-TYPE    226    234    191
D161V7, multiclass
        clus
vv       ASXL2 MUTATED ASXL2 WILD-TYPE
  CLUS_1             1             226
  CLUS_2             1             234
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASXL2 MUTATED        0      1      2
  ASXL2 WILD-TYPE    196    189    266
D161V8, multiclass
        clus
vv       ASXL2 MUTATED ASXL2 WILD-TYPE
  CLUS_1             0             196
  CLUS_2             1             189
  CLUS_3             2             266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASXL2 MUTATED        0      1      1      1
  ASXL2 WILD-TYPE    136    106    182     82
D161V9, multiclass
        clus
vv       ASXL2 MUTATED ASXL2 WILD-TYPE
  CLUS_1             0             136
  CLUS_2             1             106
  CLUS_3             1             182
  CLUS_4             1              82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASXL2 MUTATED        1      1      1
  ASXL2 WILD-TYPE    221    183    102
D161V10, multiclass
        clus
vv       ASXL2 MUTATED ASXL2 WILD-TYPE
  CLUS_1             1             221
  CLUS_2             1             183
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASXL2 MUTATED        0      1      2
  ASXL2 WILD-TYPE    184    161    157
D161V11, multiclass
        clus
vv       ASXL2 MUTATED ASXL2 WILD-TYPE
  CLUS_1             0             184
  CLUS_2             1             161
  CLUS_3             2             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASXL2 MUTATED        0      1      2      0
  ASXL2 WILD-TYPE     90    137    186     89
D161V12, multiclass
        clus
vv       ASXL2 MUTATED ASXL2 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             1             137
  CLUS_3             2             186
  CLUS_4             0              89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(162) Variable = CIB1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB1 MUTATED        0      0      1      0
  CIB1 WILD-TYPE     69     43     73     54
D162V1, multiclass
[1] "Remove cluster labels:" "CIB1 MUTATED"          
clus
  CIB1 MUTATED CIB1 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2623     TCGA-19-2624 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2629     TCGA-19-2631     TCGA-19-4068 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB1 MUTATED        0      0      1      0
  CIB1 WILD-TYPE     63     50     47     79
D162V2, multiclass
[1] "Remove cluster labels:" "CIB1 MUTATED"          
clus
  CIB1 MUTATED CIB1 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2623     TCGA-19-2624 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2629     TCGA-19-2631     TCGA-19-4068 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB1 MUTATED        1      0      0      0
  CIB1 WILD-TYPE     76     93     45     60
D162V3, multiclass
[1] "Remove cluster labels:" "CIB1 MUTATED"          
clus
  CIB1 MUTATED CIB1 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB1 MUTATED        0      0      1
  CIB1 WILD-TYPE    138     61     75
D162V4, multiclass
[1] "Remove cluster labels:" "CIB1 MUTATED"          
clus
  CIB1 MUTATED CIB1 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB1 MUTATED        1      4      0
  CIB1 WILD-TYPE    294    477      7
D162V5, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            1            294
  CLUS_2            4            477
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB1 MUTATED        1      2      0      2
  CIB1 WILD-TYPE    159    230     64    164
D162V6, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            1            159
  CLUS_2            2            230
  CLUS_3            0             64
  CLUS_4            2            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB1 MUTATED        1      1      2
  CIB1 WILD-TYPE    226    234    190
D162V7, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            1            226
  CLUS_2            1            234
  CLUS_3            2            190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB1 MUTATED        0      1      3
  CIB1 WILD-TYPE    196    189    265
D162V8, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            1            189
  CLUS_3            3            265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB1 MUTATED        0      1      1      2
  CIB1 WILD-TYPE    136    106    182     81
D162V9, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            0            136
  CLUS_2            1            106
  CLUS_3            1            182
  CLUS_4            2             81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB1 MUTATED        0      4      0
  CIB1 WILD-TYPE    222    180    103
D162V10, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            0            222
  CLUS_2            4            180
  CLUS_3            0            103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB1 MUTATED        0      3      1
  CIB1 WILD-TYPE    184    159    158
D162V11, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            0            184
  CLUS_2            3            159
  CLUS_3            1            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB1 MUTATED        0      3      1      0
  CIB1 WILD-TYPE     90    135    187     89
D162V12, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            3            135
  CLUS_3            1            187
  CLUS_4            0             89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(163) Variable = REXO1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REXO1 MUTATED        1      0      0      0
  REXO1 WILD-TYPE     68     43     74     54
D163V1, multiclass
[1] "Remove cluster labels:" "REXO1 MUTATED"         
clus
  REXO1 MUTATED REXO1 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0645      TCGA-06-0646 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REXO1 MUTATED        1      0      0      0
  REXO1 WILD-TYPE     62     50     48     79
D163V2, multiclass
[1] "Remove cluster labels:" "REXO1 MUTATED"         
clus
  REXO1 MUTATED REXO1 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0645      TCGA-06-0646 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"REXO1 WILD-TYPE" "REXO1 WILD-TYPE" "REXO1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REXO1 MUTATED        3      0      0      0
  REXO1 WILD-TYPE     74     93     45     60
D163V3, multiclass
        clus
vv       REXO1 MUTATED REXO1 WILD-TYPE
  CLUS_1             3              74
  CLUS_2             0              93
  CLUS_3             0              45
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  REXO1 MUTATED        0      2      1
  REXO1 WILD-TYPE    138     59     75
D163V4, multiclass
        clus
vv       REXO1 MUTATED REXO1 WILD-TYPE
  CLUS_1             0             138
  CLUS_2             2              59
  CLUS_3             1              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  REXO1 MUTATED        5      3      0
  REXO1 WILD-TYPE    290    478      7
D163V5, multiclass
        clus
vv       REXO1 MUTATED REXO1 WILD-TYPE
  CLUS_1             5             290
  CLUS_2             3             478
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REXO1 MUTATED        5      1      0      0
  REXO1 WILD-TYPE    155    231     64    166
D163V6, multiclass
        clus
vv       REXO1 MUTATED REXO1 WILD-TYPE
  CLUS_1             5             155
  CLUS_2             1             231
  CLUS_3             0              64
  CLUS_4             0             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  REXO1 MUTATED        3      1      1
  REXO1 WILD-TYPE    224    234    191
D163V7, multiclass
        clus
vv       REXO1 MUTATED REXO1 WILD-TYPE
  CLUS_1             3             224
  CLUS_2             1             234
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  REXO1 MUTATED        2      1      2
  REXO1 WILD-TYPE    194    189    266
D163V8, multiclass
        clus
vv       REXO1 MUTATED REXO1 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             1             189
  CLUS_3             2             266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REXO1 MUTATED        1      1      1      1
  REXO1 WILD-TYPE    135    106    182     82
D163V9, multiclass
        clus
vv       REXO1 MUTATED REXO1 WILD-TYPE
  CLUS_1             1             135
  CLUS_2             1             106
  CLUS_3             1             182
  CLUS_4             1              82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  REXO1 MUTATED        1      1      2
  REXO1 WILD-TYPE    221    183    101
D163V10, multiclass
        clus
vv       REXO1 MUTATED REXO1 WILD-TYPE
  CLUS_1             1             221
  CLUS_2             1             183
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  REXO1 MUTATED        1      1      2
  REXO1 WILD-TYPE    183    161    157
D163V11, multiclass
        clus
vv       REXO1 MUTATED REXO1 WILD-TYPE
  CLUS_1             1             183
  CLUS_2             1             161
  CLUS_3             2             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REXO1 MUTATED        0      0      3      1
  REXO1 WILD-TYPE     90    138    185     88
D163V12, multiclass
        clus
vv       REXO1 MUTATED REXO1 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             0             138
  CLUS_3             3             185
  CLUS_4             1              88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(164) Variable = SOX4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX4 MUTATED        0      0      0      1
  SOX4 WILD-TYPE     69     43     74     53
D164V1, multiclass
[1] "Remove cluster labels:" "SOX4 MUTATED"          
clus
  SOX4 MUTATED SOX4 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5418     TCGA-06-5856 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX4 MUTATED        0      1      0      0
  SOX4 WILD-TYPE     63     49     48     79
D164V2, multiclass
[1] "Remove cluster labels:" "SOX4 MUTATED"          
clus
  SOX4 MUTATED SOX4 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5418     TCGA-06-5856 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX4 MUTATED        0      1      0      0
  SOX4 WILD-TYPE     77     92     45     60
D164V3, multiclass
[1] "Remove cluster labels:" "SOX4 MUTATED"          
clus
  SOX4 MUTATED SOX4 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5418 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX4 MUTATED        1      0      0
  SOX4 WILD-TYPE    137     61     76
D164V4, multiclass
[1] "Remove cluster labels:" "SOX4 MUTATED"          
clus
  SOX4 MUTATED SOX4 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5418 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX4 MUTATED        1      5      0
  SOX4 WILD-TYPE    294    476      7
D164V5, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            1            294
  CLUS_2            5            476
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX4 MUTATED        2      1      0      4
  SOX4 WILD-TYPE    158    231     64    162
D164V6, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            2            158
  CLUS_2            1            231
  CLUS_3            0             64
  CLUS_4            4            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX4 MUTATED        3      4      0
  SOX4 WILD-TYPE    224    231    192
D164V7, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            3            224
  CLUS_2            4            231
  CLUS_3            0            192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX4 MUTATED        1      2      4
  SOX4 WILD-TYPE    195    188    264
D164V8, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            2            188
  CLUS_3            4            264
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX4 MUTATED        1      1      0      4
  SOX4 WILD-TYPE    135    106    183     79
D164V9, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            1            135
  CLUS_2            1            106
  CLUS_3            0            183
  CLUS_4            4             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX4 MUTATED        4      0      2
  SOX4 WILD-TYPE    218    184    101
D164V10, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            4            218
  CLUS_2            0            184
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX4 MUTATED        1      4      1
  SOX4 WILD-TYPE    183    158    158
D164V11, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            1            183
  CLUS_2            4            158
  CLUS_3            1            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX4 MUTATED        0      4      1      1
  SOX4 WILD-TYPE     90    134    187     88
D164V12, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            0             90
  CLUS_2            4            134
  CLUS_3            1            187
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(165) Variable = GLYAT MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYAT MUTATED        0      0      0      1
  GLYAT WILD-TYPE     69     43     74     53
D165V1, multiclass
[1] "Remove cluster labels:" "GLYAT MUTATED"         
clus
  GLYAT MUTATED GLYAT WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYAT MUTATED        0      1      0      0
  GLYAT WILD-TYPE     63     49     48     79
D165V2, multiclass
[1] "Remove cluster labels:" "GLYAT MUTATED"         
clus
  GLYAT MUTATED GLYAT WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYAT MUTATED        0      1      0      0
  GLYAT WILD-TYPE     77     92     45     60
D165V3, multiclass
[1] "Remove cluster labels:" "GLYAT MUTATED"         
clus
  GLYAT MUTATED GLYAT WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYAT MUTATED        1      0      0
  GLYAT WILD-TYPE    137     61     76
D165V4, multiclass
[1] "Remove cluster labels:" "GLYAT MUTATED"         
clus
  GLYAT MUTATED GLYAT WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYAT MUTATED        1      4      0
  GLYAT WILD-TYPE    294    477      7
D165V5, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             1             294
  CLUS_2             4             477
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYAT MUTATED        2      2      0      1
  GLYAT WILD-TYPE    158    230     64    165
D165V6, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             2             158
  CLUS_2             2             230
  CLUS_3             0              64
  CLUS_4             1             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYAT MUTATED        2      3      0
  GLYAT WILD-TYPE    225    232    192
D165V7, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             2             225
  CLUS_2             3             232
  CLUS_3             0             192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYAT MUTATED        1      3      1
  GLYAT WILD-TYPE    195    187    267
D165V8, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             1             195
  CLUS_2             3             187
  CLUS_3             1             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYAT MUTATED        1      2      0      1
  GLYAT WILD-TYPE    135    105    183     82
D165V9, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             1             135
  CLUS_2             2             105
  CLUS_3             0             183
  CLUS_4             1              82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYAT MUTATED        3      0      1
  GLYAT WILD-TYPE    219    184    102
D165V10, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             3             219
  CLUS_2             0             184
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYAT MUTATED        1      2      1
  GLYAT WILD-TYPE    183    160    158
D165V11, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             1             183
  CLUS_2             2             160
  CLUS_3             1             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYAT MUTATED        1      2      1      0
  GLYAT WILD-TYPE     89    136    187     89
D165V12, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             1              89
  CLUS_2             2             136
  CLUS_3             1             187
  CLUS_4             0              89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(166) Variable = LYPD4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LYPD4 MUTATED        0      1      1      0
  LYPD4 WILD-TYPE     69     42     73     54
D166V1, multiclass
[1] "Remove cluster labels:" "LYPD4 MUTATED"         
clus
  LYPD4 MUTATED LYPD4 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0139      TCGA-06-0140 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0152 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0154      TCGA-06-0155      TCGA-06-0157      TCGA-06-0158 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0166      TCGA-06-0167      TCGA-06-0168      TCGA-06-0169 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-32-4719      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LYPD4 MUTATED        0      1      1      0
  LYPD4 WILD-TYPE     63     49     47     79
D166V2, multiclass
[1] "Remove cluster labels:" "LYPD4 MUTATED"         
clus
  LYPD4 MUTATED LYPD4 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0139      TCGA-06-0140 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0152 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0154      TCGA-06-0155      TCGA-06-0157      TCGA-06-0158 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0166      TCGA-06-0167      TCGA-06-0168      TCGA-06-0169 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-32-4719      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LYPD4 MUTATED        0      2      1      0
  LYPD4 WILD-TYPE     77     91     44     60
D166V3, multiclass
        clus
vv       LYPD4 MUTATED LYPD4 WILD-TYPE
  CLUS_1             0              77
  CLUS_2             2              91
  CLUS_3             1              44
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LYPD4 MUTATED        1      0      2
  LYPD4 WILD-TYPE    137     61     74
D166V4, multiclass
        clus
vv       LYPD4 MUTATED LYPD4 WILD-TYPE
  CLUS_1             1             137
  CLUS_2             0              61
  CLUS_3             2              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LYPD4 MUTATED        3      2      0
  LYPD4 WILD-TYPE    292    479      7
D166V5, multiclass
        clus
vv       LYPD4 MUTATED LYPD4 WILD-TYPE
  CLUS_1             3             292
  CLUS_2             2             479
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LYPD4 MUTATED        4      0      0      0
  LYPD4 WILD-TYPE    156    232     64    166
D166V6, multiclass
        clus
vv       LYPD4 MUTATED LYPD4 WILD-TYPE
  CLUS_1             4             156
  CLUS_2             0             232
  CLUS_3             0              64
  CLUS_4             0             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LYPD4 MUTATED        2      0      1
  LYPD4 WILD-TYPE    225    235    191
D166V7, multiclass
        clus
vv       LYPD4 MUTATED LYPD4 WILD-TYPE
  CLUS_1             2             225
  CLUS_2             0             235
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LYPD4 MUTATED        1      1      1
  LYPD4 WILD-TYPE    195    189    267
D166V8, multiclass
        clus
vv       LYPD4 MUTATED LYPD4 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             1             189
  CLUS_3             1             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LYPD4 MUTATED        0      1      1      0
  LYPD4 WILD-TYPE    136    106    182     83
D166V9, multiclass
[1] "Remove cluster labels:" "LYPD4 MUTATED"         
clus
  LYPD4 MUTATED LYPD4 WILD-TYPE 
              2             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LYPD4 MUTATED        0      0      2
  LYPD4 WILD-TYPE    222    184    101
D166V10, multiclass
[1] "Remove cluster labels:" "LYPD4 MUTATED"         
clus
  LYPD4 MUTATED LYPD4 WILD-TYPE 
              2             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LYPD4 MUTATED        0      0      2
  LYPD4 WILD-TYPE    184    162    157
D166V11, multiclass
[1] "Remove cluster labels:" "LYPD4 MUTATED"         
clus
  LYPD4 MUTATED LYPD4 WILD-TYPE 
              2             503 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495      TCGA-HW-8319 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LYPD4 MUTATED        0      0      1      1
  LYPD4 WILD-TYPE     90    138    187     88
D166V12, multiclass
[1] "Remove cluster labels:" "LYPD4 MUTATED"         
clus
  LYPD4 MUTATED LYPD4 WILD-TYPE 
              2             503 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7495      TCGA-HW-8319 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" "LYPD4 WILD-TYPE" 

Clustering(167) Variable = EPS8L1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPS8L1 MUTATED        0      1      0      0
  EPS8L1 WILD-TYPE     69     42     74     54
D167V1, multiclass
[1] "Remove cluster labels:" "EPS8L1 MUTATED"        
clus
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2638       TCGA-32-4208 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPS8L1 MUTATED        0      1      0      0
  EPS8L1 WILD-TYPE     63     49     48     79
D167V2, multiclass
[1] "Remove cluster labels:" "EPS8L1 MUTATED"        
clus
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2638       TCGA-32-4208 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPS8L1 MUTATED        0      1      0      1
  EPS8L1 WILD-TYPE     77     92     45     59
D167V3, multiclass
[1] "Remove cluster labels:" "EPS8L1 MUTATED"        
clus
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5953 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5139       TCGA-26-6173       TCGA-26-6174       TCGA-27-1830 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2502       TCGA-28-2509 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5211 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-5651       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-87-5896 
"EPS8L1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EPS8L1 MUTATED        2      0      0
  EPS8L1 WILD-TYPE    136     61     76
D167V4, multiclass
[1] "Remove cluster labels:" "EPS8L1 MUTATED"        
clus
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5953 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5139       TCGA-26-6173       TCGA-26-6174       TCGA-27-1830 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2502       TCGA-28-2509 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5211 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-5651       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-87-5896 
"EPS8L1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EPS8L1 MUTATED        2      3      0
  EPS8L1 WILD-TYPE    293    478      7
D167V5, multiclass
        clus
vv       EPS8L1 MUTATED EPS8L1 WILD-TYPE
  CLUS_1              2              293
  CLUS_2              3              478
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPS8L1 MUTATED        2      2      0      0
  EPS8L1 WILD-TYPE    158    230     64    166
D167V6, multiclass
        clus
vv       EPS8L1 MUTATED EPS8L1 WILD-TYPE
  CLUS_1              2              158
  CLUS_2              2              230
  CLUS_3              0               64
  CLUS_4              0              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EPS8L1 MUTATED        2      1      1
  EPS8L1 WILD-TYPE    225    234    191
D167V7, multiclass
        clus
vv       EPS8L1 MUTATED EPS8L1 WILD-TYPE
  CLUS_1              2              225
  CLUS_2              1              234
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EPS8L1 MUTATED        1      2      1
  EPS8L1 WILD-TYPE    195    188    267
D167V8, multiclass
        clus
vv       EPS8L1 MUTATED EPS8L1 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              2              188
  CLUS_3              1              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPS8L1 MUTATED        0      1      2      0
  EPS8L1 WILD-TYPE    136    106    181     83
D167V9, multiclass
        clus
vv       EPS8L1 MUTATED EPS8L1 WILD-TYPE
  CLUS_1              0              136
  CLUS_2              1              106
  CLUS_3              2              181
  CLUS_4              0               83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EPS8L1 MUTATED        1      1      1
  EPS8L1 WILD-TYPE    221    183    102
D167V10, multiclass
        clus
vv       EPS8L1 MUTATED EPS8L1 WILD-TYPE
  CLUS_1              1              221
  CLUS_2              1              183
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EPS8L1 MUTATED        1      0      2
  EPS8L1 WILD-TYPE    183    162    157
D167V11, multiclass
        clus
vv       EPS8L1 MUTATED EPS8L1 WILD-TYPE
  CLUS_1              1              183
  CLUS_2              0              162
  CLUS_3              2              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPS8L1 MUTATED        1      0      2      0
  EPS8L1 WILD-TYPE     89    138    186     89
D167V12, multiclass
        clus
vv       EPS8L1 MUTATED EPS8L1 WILD-TYPE
  CLUS_1              1               89
  CLUS_2              0              138
  CLUS_3              2              186
  CLUS_4              0               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(168) Variable = CNOT4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT4 MUTATED        0      1      0      0
  CNOT4 WILD-TYPE     69     42     74     54
D168V1, multiclass
[1] "Remove cluster labels:" "CNOT4 MUTATED"         
clus
  CNOT4 MUTATED CNOT4 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT4 MUTATED        0      1      0      0
  CNOT4 WILD-TYPE     63     49     48     79
D168V2, multiclass
[1] "Remove cluster labels:" "CNOT4 MUTATED"         
clus
  CNOT4 MUTATED CNOT4 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT4 MUTATED        0      0      1      0
  CNOT4 WILD-TYPE     77     93     44     60
D168V3, multiclass
[1] "Remove cluster labels:" "CNOT4 MUTATED"         
clus
  CNOT4 MUTATED CNOT4 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT4 MUTATED        1      0      0
  CNOT4 WILD-TYPE    137     61     76
D168V4, multiclass
[1] "Remove cluster labels:" "CNOT4 MUTATED"         
clus
  CNOT4 MUTATED CNOT4 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"CNOT4 WILD-TYPE" "CNOT4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT4 MUTATED        1      5      0
  CNOT4 WILD-TYPE    294    476      7
D168V5, multiclass
        clus
vv       CNOT4 MUTATED CNOT4 WILD-TYPE
  CLUS_1             1             294
  CLUS_2             5             476
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT4 MUTATED        1      2      1      1
  CNOT4 WILD-TYPE    159    230     63    165
D168V6, multiclass
        clus
vv       CNOT4 MUTATED CNOT4 WILD-TYPE
  CLUS_1             1             159
  CLUS_2             2             230
  CLUS_3             1              63
  CLUS_4             1             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT4 MUTATED        2      2      1
  CNOT4 WILD-TYPE    225    233    191
D168V7, multiclass
        clus
vv       CNOT4 MUTATED CNOT4 WILD-TYPE
  CLUS_1             2             225
  CLUS_2             2             233
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT4 MUTATED        0      3      2
  CNOT4 WILD-TYPE    196    187    266
D168V8, multiclass
        clus
vv       CNOT4 MUTATED CNOT4 WILD-TYPE
  CLUS_1             0             196
  CLUS_2             3             187
  CLUS_3             2             266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT4 MUTATED        0      3      1      1
  CNOT4 WILD-TYPE    136    104    182     82
D168V9, multiclass
        clus
vv       CNOT4 MUTATED CNOT4 WILD-TYPE
  CLUS_1             0             136
  CLUS_2             3             104
  CLUS_3             1             182
  CLUS_4             1              82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT4 MUTATED        1      1      3
  CNOT4 WILD-TYPE    221    183    100
D168V10, multiclass
        clus
vv       CNOT4 MUTATED CNOT4 WILD-TYPE
  CLUS_1             1             221
  CLUS_2             1             183
  CLUS_3             3             100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT4 MUTATED        3      0      2
  CNOT4 WILD-TYPE    181    162    157
D168V11, multiclass
        clus
vv       CNOT4 MUTATED CNOT4 WILD-TYPE
  CLUS_1             3             181
  CLUS_2             0             162
  CLUS_3             2             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT4 MUTATED        0      3      2      0
  CNOT4 WILD-TYPE     90    135    186     89
D168V12, multiclass
        clus
vv       CNOT4 MUTATED CNOT4 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             3             135
  CLUS_3             2             186
  CLUS_4             0              89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(169) Variable = MYH8 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH8 MUTATED        2      0      2      1
  MYH8 WILD-TYPE     67     43     72     53
D169V1, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            2             67
  CLUS_2            0             43
  CLUS_3            2             72
  CLUS_4            1             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH8 MUTATED        1      1      2      1
  MYH8 WILD-TYPE     62     49     46     78
D169V2, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            1             62
  CLUS_2            1             49
  CLUS_3            2             46
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH8 MUTATED        3      1      0      3
  MYH8 WILD-TYPE     74     92     45     57
D169V3, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            3             74
  CLUS_2            1             92
  CLUS_3            0             45
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYH8 MUTATED        1      3      3
  MYH8 WILD-TYPE    137     58     73
D169V4, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            1            137
  CLUS_2            3             58
  CLUS_3            3             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYH8 MUTATED       10     11      0
  MYH8 WILD-TYPE    285    470      7
D169V5, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1           10            285
  CLUS_2           11            470
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH8 MUTATED        8      7      0      3
  MYH8 WILD-TYPE    152    225     64    163
D169V6, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            8            152
  CLUS_2            7            225
  CLUS_3            0             64
  CLUS_4            3            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYH8 MUTATED        8      3      6
  MYH8 WILD-TYPE    219    232    186
D169V7, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            8            219
  CLUS_2            3            232
  CLUS_3            6            186
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYH8 MUTATED        5      7      5
  MYH8 WILD-TYPE    191    183    263
D169V8, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            5            191
  CLUS_2            7            183
  CLUS_3            5            263
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH8 MUTATED        4      4      4      2
  MYH8 WILD-TYPE    132    103    179     81
D169V9, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            4            132
  CLUS_2            4            103
  CLUS_3            4            179
  CLUS_4            2             81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYH8 MUTATED        6      3      5
  MYH8 WILD-TYPE    216    181     98
D169V10, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            6            216
  CLUS_2            3            181
  CLUS_3            5             98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYH8 MUTATED        4      5      5
  MYH8 WILD-TYPE    180    157    154
D169V11, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            4            180
  CLUS_2            5            157
  CLUS_3            5            154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH8 MUTATED        2      3      5      4
  MYH8 WILD-TYPE     88    135    183     85
D169V12, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            2             88
  CLUS_2            3            135
  CLUS_3            5            183
  CLUS_4            4             85
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(170) Variable = DPYS MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DPYS MUTATED        0      0      0      1
  DPYS WILD-TYPE     69     43     74     53
D170V1, multiclass
[1] "Remove cluster labels:" "DPYS MUTATED"          
clus
  DPYS MUTATED DPYS WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0189     TCGA-06-0192 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DPYS MUTATED        0      1      0      0
  DPYS WILD-TYPE     63     49     48     79
D170V2, multiclass
[1] "Remove cluster labels:" "DPYS MUTATED"          
clus
  DPYS MUTATED DPYS WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0189     TCGA-06-0192 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DPYS MUTATED        0      0      0      1
  DPYS WILD-TYPE     77     93     45     59
D170V3, multiclass
[1] "Remove cluster labels:" "DPYS MUTATED"          
clus
  DPYS MUTATED DPYS WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0189     TCGA-06-0192 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-1806 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DPYS MUTATED        1      0      0
  DPYS WILD-TYPE    137     61     76
D170V4, multiclass
[1] "Remove cluster labels:" "DPYS MUTATED"          
clus
  DPYS MUTATED DPYS WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0189     TCGA-06-0192 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-1806 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" "DPYS WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"DPYS WILD-TYPE" "DPYS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DPYS MUTATED        1      4      0
  DPYS WILD-TYPE    294    477      7
D170V5, multiclass
        clus
vv       DPYS MUTATED DPYS WILD-TYPE
  CLUS_1            1            294
  CLUS_2            4            477
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DPYS MUTATED        0      2      0      2
  DPYS WILD-TYPE    160    230     64    164
D170V6, multiclass
        clus
vv       DPYS MUTATED DPYS WILD-TYPE
  CLUS_1            0            160
  CLUS_2            2            230
  CLUS_3            0             64
  CLUS_4            2            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DPYS MUTATED        1      1      2
  DPYS WILD-TYPE    226    234    190
D170V7, multiclass
        clus
vv       DPYS MUTATED DPYS WILD-TYPE
  CLUS_1            1            226
  CLUS_2            1            234
  CLUS_3            2            190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DPYS MUTATED        0      1      3
  DPYS WILD-TYPE    196    189    265
D170V8, multiclass
        clus
vv       DPYS MUTATED DPYS WILD-TYPE
  CLUS_1            0            196
  CLUS_2            1            189
  CLUS_3            3            265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DPYS MUTATED        1      1      2      0
  DPYS WILD-TYPE    135    106    181     83
D170V9, multiclass
        clus
vv       DPYS MUTATED DPYS WILD-TYPE
  CLUS_1            1            135
  CLUS_2            1            106
  CLUS_3            2            181
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DPYS MUTATED        1      3      0
  DPYS WILD-TYPE    221    181    103
D170V10, multiclass
        clus
vv       DPYS MUTATED DPYS WILD-TYPE
  CLUS_1            1            221
  CLUS_2            3            181
  CLUS_3            0            103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DPYS MUTATED        0      3      1
  DPYS WILD-TYPE    184    159    158
D170V11, multiclass
        clus
vv       DPYS MUTATED DPYS WILD-TYPE
  CLUS_1            0            184
  CLUS_2            3            159
  CLUS_3            1            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DPYS MUTATED        0      2      1      1
  DPYS WILD-TYPE     90    136    187     88
D170V12, multiclass
        clus
vv       DPYS MUTATED DPYS WILD-TYPE
  CLUS_1            0             90
  CLUS_2            2            136
  CLUS_3            1            187
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(171) Variable = TLR7 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLR7 MUTATED        0      2      1      0
  TLR7 WILD-TYPE     69     41     73     54
D171V1, multiclass
        clus
vv       TLR7 MUTATED TLR7 WILD-TYPE
  CLUS_1            0             69
  CLUS_2            2             41
  CLUS_3            1             73
  CLUS_4            0             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLR7 MUTATED        1      1      1      0
  TLR7 WILD-TYPE     62     49     47     79
D171V2, multiclass
        clus
vv       TLR7 MUTATED TLR7 WILD-TYPE
  CLUS_1            1             62
  CLUS_2            1             49
  CLUS_3            1             47
  CLUS_4            0             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLR7 MUTATED        1      2      1      0
  TLR7 WILD-TYPE     76     91     44     60
D171V3, multiclass
        clus
vv       TLR7 MUTATED TLR7 WILD-TYPE
  CLUS_1            1             76
  CLUS_2            2             91
  CLUS_3            1             44
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLR7 MUTATED        2      0      2
  TLR7 WILD-TYPE    136     61     74
D171V4, multiclass
        clus
vv       TLR7 MUTATED TLR7 WILD-TYPE
  CLUS_1            2            136
  CLUS_2            0             61
  CLUS_3            2             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLR7 MUTATED        5      5      0
  TLR7 WILD-TYPE    290    476      7
D171V5, multiclass
        clus
vv       TLR7 MUTATED TLR7 WILD-TYPE
  CLUS_1            5            290
  CLUS_2            5            476
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLR7 MUTATED        6      3      0      1
  TLR7 WILD-TYPE    154    229     64    165
D171V6, multiclass
        clus
vv       TLR7 MUTATED TLR7 WILD-TYPE
  CLUS_1            6            154
  CLUS_2            3            229
  CLUS_3            0             64
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLR7 MUTATED        4      2      2
  TLR7 WILD-TYPE    223    233    190
D171V7, multiclass
        clus
vv       TLR7 MUTATED TLR7 WILD-TYPE
  CLUS_1            4            223
  CLUS_2            2            233
  CLUS_3            2            190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLR7 MUTATED        3      3      2
  TLR7 WILD-TYPE    193    187    266
D171V8, multiclass
        clus
vv       TLR7 MUTATED TLR7 WILD-TYPE
  CLUS_1            3            193
  CLUS_2            3            187
  CLUS_3            2            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLR7 MUTATED        2      1      2      1
  TLR7 WILD-TYPE    134    106    181     82
D171V9, multiclass
        clus
vv       TLR7 MUTATED TLR7 WILD-TYPE
  CLUS_1            2            134
  CLUS_2            1            106
  CLUS_3            2            181
  CLUS_4            1             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLR7 MUTATED        2      2      2
  TLR7 WILD-TYPE    220    182    101
D171V10, multiclass
        clus
vv       TLR7 MUTATED TLR7 WILD-TYPE
  CLUS_1            2            220
  CLUS_2            2            182
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLR7 MUTATED        1      1      4
  TLR7 WILD-TYPE    183    161    155
D171V11, multiclass
        clus
vv       TLR7 MUTATED TLR7 WILD-TYPE
  CLUS_1            1            183
  CLUS_2            1            161
  CLUS_3            4            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLR7 MUTATED        1      0      4      1
  TLR7 WILD-TYPE     89    138    184     88
D171V12, multiclass
        clus
vv       TLR7 MUTATED TLR7 WILD-TYPE
  CLUS_1            1             89
  CLUS_2            0            138
  CLUS_3            4            184
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(172) Variable = MYH11 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH11 MUTATED        1      1      2      1
  MYH11 WILD-TYPE     68     42     72     53
D172V1, multiclass
        clus
vv       MYH11 MUTATED MYH11 WILD-TYPE
  CLUS_1             1              68
  CLUS_2             1              42
  CLUS_3             2              72
  CLUS_4             1              53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH11 MUTATED        0      2      1      2
  MYH11 WILD-TYPE     63     48     47     77
D172V2, multiclass
        clus
vv       MYH11 MUTATED MYH11 WILD-TYPE
  CLUS_1             0              63
  CLUS_2             2              48
  CLUS_3             1              47
  CLUS_4             2              77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH11 MUTATED        1      1      3      0
  MYH11 WILD-TYPE     76     92     42     60
D172V3, multiclass
        clus
vv       MYH11 MUTATED MYH11 WILD-TYPE
  CLUS_1             1              76
  CLUS_2             1              92
  CLUS_3             3              42
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYH11 MUTATED        4      0      1
  MYH11 WILD-TYPE    134     61     75
D172V4, multiclass
        clus
vv       MYH11 MUTATED MYH11 WILD-TYPE
  CLUS_1             4             134
  CLUS_2             0              61
  CLUS_3             1              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYH11 MUTATED        6      8      0
  MYH11 WILD-TYPE    289    473      7
D172V5, multiclass
        clus
vv       MYH11 MUTATED MYH11 WILD-TYPE
  CLUS_1             6             289
  CLUS_2             8             473
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH11 MUTATED        3      3      1      3
  MYH11 WILD-TYPE    157    229     63    163
D172V6, multiclass
        clus
vv       MYH11 MUTATED MYH11 WILD-TYPE
  CLUS_1             3             157
  CLUS_2             3             229
  CLUS_3             1              63
  CLUS_4             3             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYH11 MUTATED        4      3      3
  MYH11 WILD-TYPE    223    232    189
D172V7, multiclass
        clus
vv       MYH11 MUTATED MYH11 WILD-TYPE
  CLUS_1             4             223
  CLUS_2             3             232
  CLUS_3             3             189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYH11 MUTATED        3      4      3
  MYH11 WILD-TYPE    193    186    265
D172V8, multiclass
        clus
vv       MYH11 MUTATED MYH11 WILD-TYPE
  CLUS_1             3             193
  CLUS_2             4             186
  CLUS_3             3             265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH11 MUTATED        2      2      4      1
  MYH11 WILD-TYPE    134    105    179     82
D172V9, multiclass
        clus
vv       MYH11 MUTATED MYH11 WILD-TYPE
  CLUS_1             2             134
  CLUS_2             2             105
  CLUS_3             4             179
  CLUS_4             1              82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYH11 MUTATED        3      3      3
  MYH11 WILD-TYPE    219    181    100
D172V10, multiclass
        clus
vv       MYH11 MUTATED MYH11 WILD-TYPE
  CLUS_1             3             219
  CLUS_2             3             181
  CLUS_3             3             100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYH11 MUTATED        2      3      4
  MYH11 WILD-TYPE    182    159    155
D172V11, multiclass
        clus
vv       MYH11 MUTATED MYH11 WILD-TYPE
  CLUS_1             2             182
  CLUS_2             3             159
  CLUS_3             4             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH11 MUTATED        0      3      4      2
  MYH11 WILD-TYPE     90    135    184     87
D172V12, multiclass
        clus
vv       MYH11 MUTATED MYH11 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             3             135
  CLUS_3             4             184
  CLUS_4             2              87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(173) Variable = SLC9A4 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC9A4 MUTATED        0      2      3      0
  SLC9A4 WILD-TYPE     69     41     71     54
D173V1, multiclass
        clus
vv       SLC9A4 MUTATED SLC9A4 WILD-TYPE
  CLUS_1              0               69
  CLUS_2              2               41
  CLUS_3              3               71
  CLUS_4              0               54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC9A4 MUTATED        1      1      2      1
  SLC9A4 WILD-TYPE     62     49     46     78
D173V2, multiclass
        clus
vv       SLC9A4 MUTATED SLC9A4 WILD-TYPE
  CLUS_1              1               62
  CLUS_2              1               49
  CLUS_3              2               46
  CLUS_4              1               78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC9A4 MUTATED        1      1      1      3
  SLC9A4 WILD-TYPE     76     92     44     57
D173V3, multiclass
        clus
vv       SLC9A4 MUTATED SLC9A4 WILD-TYPE
  CLUS_1              1               76
  CLUS_2              1               92
  CLUS_3              1               44
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC9A4 MUTATED        3      2      1
  SLC9A4 WILD-TYPE    135     59     75
D173V4, multiclass
        clus
vv       SLC9A4 MUTATED SLC9A4 WILD-TYPE
  CLUS_1              3              135
  CLUS_2              2               59
  CLUS_3              1               75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC9A4 MUTATED        5      6      0
  SLC9A4 WILD-TYPE    290    475      7
D173V5, multiclass
        clus
vv       SLC9A4 MUTATED SLC9A4 WILD-TYPE
  CLUS_1              5              290
  CLUS_2              6              475
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC9A4 MUTATED        3      2      0      1
  SLC9A4 WILD-TYPE    157    230     64    165
D173V6, multiclass
        clus
vv       SLC9A4 MUTATED SLC9A4 WILD-TYPE
  CLUS_1              3              157
  CLUS_2              2              230
  CLUS_3              0               64
  CLUS_4              1              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC9A4 MUTATED        5      3      0
  SLC9A4 WILD-TYPE    222    232    192
D173V7, multiclass
        clus
vv       SLC9A4 MUTATED SLC9A4 WILD-TYPE
  CLUS_1              5              222
  CLUS_2              3              232
  CLUS_3              0              192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC9A4 MUTATED        4      3      1
  SLC9A4 WILD-TYPE    192    187    267
D173V8, multiclass
        clus
vv       SLC9A4 MUTATED SLC9A4 WILD-TYPE
  CLUS_1              4              192
  CLUS_2              3              187
  CLUS_3              1              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC9A4 MUTATED        2      1      0      1
  SLC9A4 WILD-TYPE    134    106    183     82
D173V9, multiclass
        clus
vv       SLC9A4 MUTATED SLC9A4 WILD-TYPE
  CLUS_1              2              134
  CLUS_2              1              106
  CLUS_3              0              183
  CLUS_4              1               82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC9A4 MUTATED        3      0      1
  SLC9A4 WILD-TYPE    219    184    102
D173V10, multiclass
        clus
vv       SLC9A4 MUTATED SLC9A4 WILD-TYPE
  CLUS_1              3              219
  CLUS_2              0              184
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC9A4 MUTATED        0      2      1
  SLC9A4 WILD-TYPE    184    160    158
D173V11, multiclass
        clus
vv       SLC9A4 MUTATED SLC9A4 WILD-TYPE
  CLUS_1              0              184
  CLUS_2              2              160
  CLUS_3              1              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC9A4 MUTATED        0      2      1      0
  SLC9A4 WILD-TYPE     90    136    187     89
D173V12, multiclass
        clus
vv       SLC9A4 MUTATED SLC9A4 WILD-TYPE
  CLUS_1              0               90
  CLUS_2              2              136
  CLUS_3              1              187
  CLUS_4              0               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(174) Variable = SEMA3C MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMA3C MUTATED        3      4      2      2
  SEMA3C WILD-TYPE     66     39     72     52
D174V1, multiclass
        clus
vv       SEMA3C MUTATED SEMA3C WILD-TYPE
  CLUS_1              3               66
  CLUS_2              4               39
  CLUS_3              2               72
  CLUS_4              2               52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMA3C MUTATED        1      5      1      4
  SEMA3C WILD-TYPE     62     45     47     75
D174V2, multiclass
        clus
vv       SEMA3C MUTATED SEMA3C WILD-TYPE
  CLUS_1              1               62
  CLUS_2              5               45
  CLUS_3              1               47
  CLUS_4              4               75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMA3C MUTATED        3      7      1      0
  SEMA3C WILD-TYPE     74     86     44     60
D174V3, multiclass
        clus
vv       SEMA3C MUTATED SEMA3C WILD-TYPE
  CLUS_1              3               74
  CLUS_2              7               86
  CLUS_3              1               44
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEMA3C MUTATED        5      2      4
  SEMA3C WILD-TYPE    133     59     72
D174V4, multiclass
        clus
vv       SEMA3C MUTATED SEMA3C WILD-TYPE
  CLUS_1              5              133
  CLUS_2              2               59
  CLUS_3              4               72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEMA3C MUTATED        9      2      1
  SEMA3C WILD-TYPE    286    479      6
D174V5, multiclass
        clus
vv       SEMA3C MUTATED SEMA3C WILD-TYPE
  CLUS_1              9              286
  CLUS_2              2              479
  CLUS_3              1                6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMA3C MUTATED        1      1      0      0
  SEMA3C WILD-TYPE    159    231     64    166
D174V6, multiclass
[1] "Remove cluster labels:" "SEMA3C MUTATED"        
clus
  SEMA3C MUTATED SEMA3C WILD-TYPE 
               2              620 
      TCGA-06-0152       TCGA-06-0650       TCGA-06-1804       TCGA-06-1806 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0862       TCGA-14-1043       TCGA-14-1395 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-14-1450       TCGA-15-1444       TCGA-19-5947       TCGA-19-5950 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-26-6174       TCGA-28-2501       TCGA-28-2510       TCGA-28-5204 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5211 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-41-5651       TCGA-41-6646 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-74-6573       TCGA-74-6575       TCGA-74-6577       TCGA-74-6578 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-74-6584       TCGA-76-4925       TCGA-76-4926       TCGA-76-4927 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-76-4928       TCGA-76-4929       TCGA-76-4931       TCGA-76-4932 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-76-4934       TCGA-76-4935       TCGA-76-6191       TCGA-76-6192 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-76-6193       TCGA-76-6280       TCGA-76-6282       TCGA-76-6283 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-76-6285       TCGA-76-6286       TCGA-76-6656       TCGA-76-6657 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-76-6660       TCGA-76-6661       TCGA-76-6662       TCGA-76-6663 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-76-6664       TCGA-81-5910       TCGA-81-5911       TCGA-87-5896 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75M 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6392       TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7011 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015       TCGA-DU-7018 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7607       TCGA-HT-7608 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74J       TCGA-HT-A74K 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CW       TCGA-QH-A6CX 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEMA3C MUTATED        9      1      0
  SEMA3C WILD-TYPE    218    234    192
D174V7, multiclass
        clus
vv       SEMA3C MUTATED SEMA3C WILD-TYPE
  CLUS_1              9              218
  CLUS_2              1              234
  CLUS_3              0              192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEMA3C MUTATED        8      2      0
  SEMA3C WILD-TYPE    188    188    268
D174V8, multiclass
        clus
vv       SEMA3C MUTATED SEMA3C WILD-TYPE
  CLUS_1              8              188
  CLUS_2              2              188
  CLUS_3              0              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMA3C MUTATED        1      0      0      0
  SEMA3C WILD-TYPE    135    107    183     83
D174V9, multiclass
[1] "Remove cluster labels:" "SEMA3C MUTATED"        
clus
  SEMA3C MUTATED SEMA3C WILD-TYPE 
               1              508 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEMA3C MUTATED        1      0      0
  SEMA3C WILD-TYPE    221    184    103
D174V10, multiclass
[1] "Remove cluster labels:" "SEMA3C MUTATED"        
clus
  SEMA3C MUTATED SEMA3C WILD-TYPE 
               1              508 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5F6       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEMA3C MUTATED        1      0      0
  SEMA3C WILD-TYPE    183    162    159
D174V11, multiclass
[1] "Remove cluster labels:" "SEMA3C MUTATED"        
clus
  SEMA3C MUTATED SEMA3C WILD-TYPE 
               1              504 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7607 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMA3C MUTATED        1      0      0      0
  SEMA3C WILD-TYPE     89    138    188     89
D174V12, multiclass
[1] "Remove cluster labels:" "SEMA3C MUTATED"        
clus
  SEMA3C MUTATED SEMA3C WILD-TYPE 
               1              504 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7015 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7607 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7495 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6U8       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RM       TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RQ       TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-TQ-A7RV       TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VM-A8C9       TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VM-A8CE       TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-WH-A86K       TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" "SEMA3C WILD-TYPE" 

Clustering(175) Variable = PAN3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAN3 MUTATED        3      0      1      1
  PAN3 WILD-TYPE     66     43     73     53
D175V1, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            3             66
  CLUS_2            0             43
  CLUS_3            1             73
  CLUS_4            1             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAN3 MUTATED        2      2      1      0
  PAN3 WILD-TYPE     61     48     47     79
D175V2, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            2             61
  CLUS_2            2             48
  CLUS_3            1             47
  CLUS_4            0             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAN3 MUTATED        2      3      1      0
  PAN3 WILD-TYPE     75     90     44     60
D175V3, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            2             75
  CLUS_2            3             90
  CLUS_3            1             44
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAN3 MUTATED        2      2      2
  PAN3 WILD-TYPE    136     59     74
D175V4, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            2            136
  CLUS_2            2             59
  CLUS_3            2             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAN3 MUTATED        4      3      0
  PAN3 WILD-TYPE    291    478      7
D175V5, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            4            291
  CLUS_2            3            478
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAN3 MUTATED        1      0      0      1
  PAN3 WILD-TYPE    159    232     64    165
D175V6, multiclass
[1] "Remove cluster labels:" "PAN3 MUTATED"          
clus
  PAN3 MUTATED PAN3 WILD-TYPE 
             2            620 
    TCGA-06-0152     TCGA-06-0650     TCGA-06-1804     TCGA-06-1806 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0862     TCGA-14-1043     TCGA-14-1395 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-14-1450     TCGA-15-1444     TCGA-19-5947     TCGA-19-5950 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-26-6173 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-26-6174     TCGA-28-2501     TCGA-28-2510     TCGA-28-5204 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-5222     TCGA-41-5651 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6577     TCGA-74-6578 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-74-6584     TCGA-76-4925     TCGA-76-4926     TCGA-76-4927 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-76-4928     TCGA-76-4929     TCGA-76-4931     TCGA-76-4932 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-76-4934     TCGA-76-4935     TCGA-76-6191     TCGA-76-6192 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-76-6193     TCGA-76-6280     TCGA-76-6282     TCGA-76-6283 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-76-6285     TCGA-76-6286     TCGA-76-6656     TCGA-76-6657 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-76-6660     TCGA-76-6661     TCGA-76-6662     TCGA-76-6663 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-76-6664     TCGA-81-5910     TCGA-81-5911     TCGA-87-5896 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A64L     TCGA-DB-A64O 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M     TCGA-DB-A75O 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011     TCGA-DU-7012 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TJ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74J     TCGA-HT-A74K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAN3 MUTATED        2      0      1
  PAN3 WILD-TYPE    225    235    191
D175V7, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            2            225
  CLUS_2            0            235
  CLUS_3            1            191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAN3 MUTATED        2      0      1
  PAN3 WILD-TYPE    194    190    267
D175V8, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            2            194
  CLUS_2            0            190
  CLUS_3            1            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAN3 MUTATED        0      0      1      0
  PAN3 WILD-TYPE    136    107    182     83
D175V9, multiclass
[1] "Remove cluster labels:" "PAN3 MUTATED"          
clus
  PAN3 MUTATED PAN3 WILD-TYPE 
             1            508 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A64L     TCGA-DB-A64O 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5F6     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAN3 MUTATED        0      1      0
  PAN3 WILD-TYPE    222    183    103
D175V10, multiclass
[1] "Remove cluster labels:" "PAN3 MUTATED"          
clus
  PAN3 MUTATED PAN3 WILD-TYPE 
             1            508 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A64L     TCGA-DB-A64O 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5F6     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAN3 MUTATED        0      0      1
  PAN3 WILD-TYPE    184    162    158
D175V11, multiclass
[1] "Remove cluster labels:" "PAN3 MUTATED"          
clus
  PAN3 MUTATED PAN3 WILD-TYPE 
             1            504 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U8     TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAN3 MUTATED        0      0      1      0
  PAN3 WILD-TYPE     90    138    187     89
D175V12, multiclass
[1] "Remove cluster labels:" "PAN3 MUTATED"          
clus
  PAN3 MUTATED PAN3 WILD-TYPE 
             1            504 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7015     TCGA-DU-7018 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7495 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U8     TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 

Clustering(176) Variable = KRT15 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT15 MUTATED        0      1      1      0
  KRT15 WILD-TYPE     69     42     73     54
D176V1, multiclass
[1] "Remove cluster labels:" "KRT15 MUTATED"         
clus
  KRT15 MUTATED KRT15 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-2470      TCGA-02-2483 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-02-2485      TCGA-02-2486      TCGA-06-0122      TCGA-06-0124 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0126      TCGA-06-0128      TCGA-06-0129      TCGA-06-0130 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0132      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0152 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0154      TCGA-06-0155      TCGA-06-0157      TCGA-06-0158 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0166      TCGA-06-0167      TCGA-06-0168      TCGA-06-0169 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0881      TCGA-06-0882 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0939      TCGA-06-1804      TCGA-06-2557      TCGA-06-2558 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2561      TCGA-06-2562      TCGA-06-2563 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2564      TCGA-06-2565      TCGA-06-2567      TCGA-06-2569 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2570      TCGA-06-5408      TCGA-06-5410      TCGA-06-5411 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5412      TCGA-06-5413      TCGA-06-5414      TCGA-06-5415 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5417      TCGA-06-5418      TCGA-06-5856      TCGA-06-5858 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5859      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0781 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0871      TCGA-14-1456 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5954      TCGA-19-5955 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-2502 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-2509      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT15 MUTATED        1      0      1      0
  KRT15 WILD-TYPE     62     50     47     79
D176V2, multiclass
[1] "Remove cluster labels:" "KRT15 MUTATED"         
clus
  KRT15 MUTATED KRT15 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-2470      TCGA-02-2483 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-02-2485      TCGA-02-2486      TCGA-06-0122      TCGA-06-0124 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0126      TCGA-06-0128      TCGA-06-0129      TCGA-06-0130 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0132      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0152 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0154      TCGA-06-0155      TCGA-06-0157      TCGA-06-0158 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0166      TCGA-06-0167      TCGA-06-0168      TCGA-06-0169 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0881      TCGA-06-0882 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0939      TCGA-06-1804      TCGA-06-2557      TCGA-06-2558 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2561      TCGA-06-2562      TCGA-06-2563 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2564      TCGA-06-2565      TCGA-06-2567      TCGA-06-2569 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2570      TCGA-06-5408      TCGA-06-5410      TCGA-06-5411 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5412      TCGA-06-5413      TCGA-06-5414      TCGA-06-5415 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5417      TCGA-06-5418      TCGA-06-5856      TCGA-06-5858 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5859      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0781 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0871      TCGA-14-1456 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5954      TCGA-19-5955 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-2502 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-2509      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT15 MUTATED        0      1      0      1
  KRT15 WILD-TYPE     77     92     45     59
D176V3, multiclass
[1] "Remove cluster labels:" "KRT15 MUTATED"         
clus
  KRT15 MUTATED KRT15 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0055      TCGA-02-2470 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0151 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0168      TCGA-06-0169 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0881      TCGA-06-0882 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0939      TCGA-06-1804      TCGA-06-1806      TCGA-06-2557 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6388      TCGA-06-6389 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-06-6693      TCGA-06-6694 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-6695      TCGA-06-6697      TCGA-06-6698      TCGA-06-6699 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-6700      TCGA-06-6701      TCGA-08-0386      TCGA-12-0616 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0740      TCGA-14-0781      TCGA-14-0786 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0787      TCGA-14-0789      TCGA-14-0790      TCGA-14-0813 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0817      TCGA-14-0862      TCGA-14-0871      TCGA-14-1043 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-1395      TCGA-14-1450      TCGA-14-1456      TCGA-14-1823 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-1825      TCGA-14-1829      TCGA-14-2554      TCGA-14-3476 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-4157      TCGA-15-0742      TCGA-15-1444      TCGA-16-0846 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-16-0861      TCGA-16-1045      TCGA-16-1048      TCGA-19-1390 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-1790      TCGA-19-2619      TCGA-19-2620      TCGA-19-2623 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-2624      TCGA-19-2625      TCGA-19-2629      TCGA-19-2631 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-4068      TCGA-19-5947      TCGA-19-5950      TCGA-19-5951 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5952      TCGA-19-5953      TCGA-19-5954      TCGA-19-5955 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-6174      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-87-5896 
"KRT15 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT15 MUTATED        1      0      1
  KRT15 WILD-TYPE    137     61     75
D176V4, multiclass
[1] "Remove cluster labels:" "KRT15 MUTATED"         
clus
  KRT15 MUTATED KRT15 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0055      TCGA-02-2470 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0151 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0168      TCGA-06-0169 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0881      TCGA-06-0882 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0939      TCGA-06-1804      TCGA-06-1806      TCGA-06-2557 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6388      TCGA-06-6389 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-06-6693      TCGA-06-6694 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-6695      TCGA-06-6697      TCGA-06-6698      TCGA-06-6699 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-6700      TCGA-06-6701      TCGA-08-0386      TCGA-12-0616 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0740      TCGA-14-0781      TCGA-14-0786 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0787      TCGA-14-0789      TCGA-14-0790      TCGA-14-0813 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0817      TCGA-14-0862      TCGA-14-0871      TCGA-14-1043 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-1395      TCGA-14-1450      TCGA-14-1456      TCGA-14-1823 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-1825      TCGA-14-1829      TCGA-14-2554      TCGA-14-3476 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-4157      TCGA-15-0742      TCGA-15-1444      TCGA-16-0846 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-16-0861      TCGA-16-1045      TCGA-16-1048      TCGA-19-1390 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-1790      TCGA-19-2619      TCGA-19-2620      TCGA-19-2623 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-2624      TCGA-19-2625      TCGA-19-2629      TCGA-19-2631 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-4068      TCGA-19-5947      TCGA-19-5950      TCGA-19-5951 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5952      TCGA-19-5953      TCGA-19-5954      TCGA-19-5955 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-6174      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-87-5896 
"KRT15 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT15 MUTATED        2      6      0
  KRT15 WILD-TYPE    293    475      7
D176V5, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             2             293
  CLUS_2             6             475
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT15 MUTATED        0      3      1      2
  KRT15 WILD-TYPE    160    229     63    164
D176V6, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             0             160
  CLUS_2             3             229
  CLUS_3             1              63
  CLUS_4             2             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT15 MUTATED        3      1      3
  KRT15 WILD-TYPE    224    234    189
D176V7, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             3             224
  CLUS_2             1             234
  CLUS_3             3             189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT15 MUTATED        2      2      3
  KRT15 WILD-TYPE    194    188    265
D176V8, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             2             188
  CLUS_3             3             265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT15 MUTATED        3      0      2      1
  KRT15 WILD-TYPE    133    107    181     82
D176V9, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             3             133
  CLUS_2             0             107
  CLUS_3             2             181
  CLUS_4             1              82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT15 MUTATED        2      3      1
  KRT15 WILD-TYPE    220    181    102
D176V10, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             2             220
  CLUS_2             3             181
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT15 MUTATED        2      2      2
  KRT15 WILD-TYPE    182    160    157
D176V11, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             2             182
  CLUS_2             2             160
  CLUS_3             2             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT15 MUTATED        1      2      2      1
  KRT15 WILD-TYPE     89    136    186     88
D176V12, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             1              89
  CLUS_2             2             136
  CLUS_3             2             186
  CLUS_4             1              88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(177) Variable = FMR1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FMR1 MUTATED        0      0      0      0
  FMR1 WILD-TYPE     69     43     74     54
D177V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FMR1 MUTATED        0      0      0      0
  FMR1 WILD-TYPE     63     50     48     79
D177V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FMR1 MUTATED        0      0      0      0
  FMR1 WILD-TYPE     77     93     45     60
D177V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FMR1 MUTATED        0      0      0
  FMR1 WILD-TYPE    138     61     76
D177V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FMR1 MUTATED        0      5      0
  FMR1 WILD-TYPE    295    476      7
D177V5, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            0            295
  CLUS_2            5            476
  CLUS_3            0              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FMR1 MUTATED        1      2      1      1
  FMR1 WILD-TYPE    159    230     63    165
D177V6, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            1            159
  CLUS_2            2            230
  CLUS_3            1             63
  CLUS_4            1            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FMR1 MUTATED        3      2      0
  FMR1 WILD-TYPE    224    233    192
D177V7, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            3            224
  CLUS_2            2            233
  CLUS_3            0            192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FMR1 MUTATED        0      5      0
  FMR1 WILD-TYPE    196    185    268
D177V8, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            5            185
  CLUS_3            0            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FMR1 MUTATED        1      3      1      0
  FMR1 WILD-TYPE    135    104    182     83
D177V9, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            1            135
  CLUS_2            3            104
  CLUS_3            1            182
  CLUS_4            0             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FMR1 MUTATED        1      2      2
  FMR1 WILD-TYPE    221    182    101
D177V10, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            1            221
  CLUS_2            2            182
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FMR1 MUTATED        3      0      2
  FMR1 WILD-TYPE    181    162    157
D177V11, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            3            181
  CLUS_2            0            162
  CLUS_3            2            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FMR1 MUTATED        1      1      2      1
  FMR1 WILD-TYPE     89    137    186     88
D177V12, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            1             89
  CLUS_2            1            137
  CLUS_3            2            186
  CLUS_4            1             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(178) Variable = PPP2R5E MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPP2R5E MUTATED        0      0      1      0
  PPP2R5E WILD-TYPE     69     43     73     54
D178V1, multiclass
[1] "Remove cluster labels:" "PPP2R5E MUTATED"       
clus
  PPP2R5E MUTATED PPP2R5E WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0152 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0154        TCGA-06-0155        TCGA-06-0157        TCGA-06-0158 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0166        TCGA-06-0167        TCGA-06-0168        TCGA-06-0169 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0173        TCGA-06-0174        TCGA-06-0178        TCGA-06-0184 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0185        TCGA-06-0188        TCGA-06-0189        TCGA-06-0192 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0195        TCGA-06-0213        TCGA-06-0214        TCGA-06-0216 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0219        TCGA-06-0237        TCGA-06-0238        TCGA-06-0240 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0241        TCGA-06-0644        TCGA-06-0645        TCGA-06-0646 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0648        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-2557 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPP2R5E MUTATED        0      0      1      0
  PPP2R5E WILD-TYPE     63     50     47     79
D178V2, multiclass
[1] "Remove cluster labels:" "PPP2R5E MUTATED"       
clus
  PPP2R5E MUTATED PPP2R5E WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0152 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0154        TCGA-06-0155        TCGA-06-0157        TCGA-06-0158 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0166        TCGA-06-0167        TCGA-06-0168        TCGA-06-0169 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0173        TCGA-06-0174        TCGA-06-0178        TCGA-06-0184 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0185        TCGA-06-0188        TCGA-06-0189        TCGA-06-0192 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0195        TCGA-06-0213        TCGA-06-0214        TCGA-06-0216 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0219        TCGA-06-0237        TCGA-06-0238        TCGA-06-0240 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0241        TCGA-06-0644        TCGA-06-0645        TCGA-06-0646 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0648        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-2557 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPP2R5E MUTATED        0      1      0      0
  PPP2R5E WILD-TYPE     77     92     45     60
D178V3, multiclass
[1] "Remove cluster labels:" "PPP2R5E MUTATED"       
clus
  PPP2R5E MUTATED PPP2R5E WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0151 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0168        TCGA-06-0169 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0173        TCGA-06-0174        TCGA-06-0178        TCGA-06-0184 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0185        TCGA-06-0188        TCGA-06-0189        TCGA-06-0192 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0195        TCGA-06-0213        TCGA-06-0214        TCGA-06-0216 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0219        TCGA-06-0237        TCGA-06-0238        TCGA-06-0240 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0241        TCGA-06-0644        TCGA-06-0645        TCGA-06-0646 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0648        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-1806 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PPP2R5E MUTATED        0      0      1
  PPP2R5E WILD-TYPE    138     61     75
D178V4, multiclass
[1] "Remove cluster labels:" "PPP2R5E MUTATED"       
clus
  PPP2R5E MUTATED PPP2R5E WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0151 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0168        TCGA-06-0169 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0173        TCGA-06-0174        TCGA-06-0178        TCGA-06-0184 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0185        TCGA-06-0188        TCGA-06-0189        TCGA-06-0192 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0195        TCGA-06-0213        TCGA-06-0214        TCGA-06-0216 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0219        TCGA-06-0237        TCGA-06-0238        TCGA-06-0240 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0241        TCGA-06-0644        TCGA-06-0645        TCGA-06-0646 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0648        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-1806 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PPP2R5E MUTATED        1      2      0
  PPP2R5E WILD-TYPE    294    479      7
D178V5, multiclass
        clus
vv       PPP2R5E MUTATED PPP2R5E WILD-TYPE
  CLUS_1               1               294
  CLUS_2               2               479
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPP2R5E MUTATED        1      1      0      0
  PPP2R5E WILD-TYPE    159    231     64    166
D178V6, multiclass
[1] "Remove cluster labels:" "PPP2R5E MUTATED"       
clus
  PPP2R5E MUTATED PPP2R5E WILD-TYPE 
                2               620 
       TCGA-06-0152        TCGA-06-0650        TCGA-06-1804        TCGA-06-1806 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0862        TCGA-14-1043        TCGA-14-1395 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-1450        TCGA-15-1444        TCGA-19-5947        TCGA-19-5950 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-1442        TCGA-26-5132        TCGA-26-5133        TCGA-26-5134 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-5135        TCGA-26-5136        TCGA-26-5139        TCGA-26-6173 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-6174        TCGA-28-2501        TCGA-28-2510        TCGA-28-5204 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5207        TCGA-28-5208        TCGA-28-5209        TCGA-28-5211 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5213        TCGA-28-5214        TCGA-28-5215        TCGA-28-5216 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5218        TCGA-28-5219        TCGA-28-5220        TCGA-28-6450 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-5222        TCGA-41-5651 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-41-6646        TCGA-74-6573        TCGA-74-6575        TCGA-74-6577 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-74-6578        TCGA-74-6584        TCGA-76-4925        TCGA-76-4926 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6280        TCGA-76-6282 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6283        TCGA-76-6285        TCGA-76-6286        TCGA-76-6656 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6657        TCGA-76-6660        TCGA-76-6661        TCGA-76-6662 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-6663        TCGA-76-6664        TCGA-81-5910        TCGA-81-5911 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-87-5896        TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-4943        TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-5394        TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6186        TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6666        TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6670        TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5275        TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5279        TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A4XA        TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A4XE        TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64L        TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64R        TCGA-DB-A64S        TCGA-DB-A64U        TCGA-DB-A64V 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64W        TCGA-DB-A64X        TCGA-DB-A75K        TCGA-DB-A75L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A75M        TCGA-DB-A75O        TCGA-DB-A75P        TCGA-DH-5140 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143        TCGA-DH-5144 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D        TCGA-DH-A66F 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US        TCGA-DH-A7UT 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847        TCGA-DU-5849 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853        TCGA-DU-5854 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871        TCGA-DU-5872 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5874        TCGA-DU-6393        TCGA-DU-6394        TCGA-DU-6395 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6396        TCGA-DU-6397        TCGA-DU-6399        TCGA-DU-6400 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6401        TCGA-DU-6402        TCGA-DU-6403        TCGA-DU-6404 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6405        TCGA-DU-6406        TCGA-DU-6407        TCGA-DU-6408 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6410        TCGA-DU-6542        TCGA-DU-7006        TCGA-DU-7007 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7008        TCGA-DU-7009        TCGA-DU-7010        TCGA-DU-7011 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015        TCGA-DU-7018 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7298        TCGA-DU-7299        TCGA-DU-7300        TCGA-DU-7301 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD        TCGA-E1-A7YE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ        TCGA-E1-A7YK 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YO 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU        TCGA-E1-A7YV 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2        TCGA-E1-A7Z3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264        TCGA-F6-A8O3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963        TCGA-FG-5964 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689        TCGA-FG-6690 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634        TCGA-FG-7636 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K        TCGA-FG-A60L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3        TCGA-FG-A70Y 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711        TCGA-FG-A713 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833        TCGA-HT-7467 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8563 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8564        TCGA-HT-A4DS        TCGA-HT-A4DV        TCGA-HT-A5R5 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RA        TCGA-HT-A5RB 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A5RC        TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A617        TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A61B        TCGA-HT-A61C        TCGA-HT-A74H        TCGA-HT-A74J 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A74K        TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-7495        TCGA-HW-8319        TCGA-HW-8320        TCGA-HW-8321 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-8322        TCGA-HW-A5KJ        TCGA-HW-A5KK        TCGA-HW-A5KM 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-IK-7675        TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CW        TCGA-QH-A6CX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6CY        TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6X5        TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6XC        TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-R8-A6ML        TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-RY-A83X        TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-RY-A843        TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6TU        TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6TY        TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6U2        TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6U9        TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WE        TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WL        TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WP        TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7IX        TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7J1        TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7QX        TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7R2        TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7R8        TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A7C4        TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84B        TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84H        TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84M        TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84S        TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RH        TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RM        TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RQ        TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RV        TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VM-A8C9        TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VM-A8CE        TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VV-A86M        TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-WH-A86K        TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-WY-A85B        TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PPP2R5E MUTATED        1      1      0
  PPP2R5E WILD-TYPE    226    234    192
D178V7, multiclass
[1] "Remove cluster labels:" "PPP2R5E MUTATED"       
clus
  PPP2R5E MUTATED PPP2R5E WILD-TYPE 
                2               652 
       TCGA-02-0047        TCGA-02-0055        TCGA-02-2483        TCGA-02-2485 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-02-2486        TCGA-06-0129        TCGA-06-0130        TCGA-06-0132 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0141        TCGA-06-0157        TCGA-06-0158        TCGA-06-0168 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0174        TCGA-06-0178        TCGA-06-0184        TCGA-06-0219 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0238        TCGA-06-0644        TCGA-06-0645        TCGA-06-0646 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0649        TCGA-06-0686        TCGA-06-0743        TCGA-06-0744 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0745        TCGA-06-0747        TCGA-06-0749        TCGA-06-0750 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0878        TCGA-06-0882        TCGA-06-1804        TCGA-06-2557 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-08-0386        TCGA-12-0616 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0821        TCGA-12-1597 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-5299        TCGA-14-0781        TCGA-14-0787        TCGA-14-0789 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0817        TCGA-14-1823        TCGA-14-1825 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-1829        TCGA-14-2554        TCGA-15-0742        TCGA-15-1444 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-16-0846        TCGA-16-1045        TCGA-19-1390        TCGA-19-2619 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1834 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-1835        TCGA-27-1837        TCGA-27-2519        TCGA-27-2521 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2528 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2499        TCGA-28-2509 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-2510        TCGA-28-2513        TCGA-28-2514        TCGA-28-5204 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5207        TCGA-28-5208        TCGA-28-5209        TCGA-28-5213 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5215        TCGA-28-5216        TCGA-28-5218        TCGA-28-5220 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-1970        TCGA-32-1980        TCGA-32-1982        TCGA-32-2615 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4213 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-5222        TCGA-41-2571        TCGA-41-2572        TCGA-41-3915 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-41-4097        TCGA-41-5651        TCGA-76-4925        TCGA-76-4926 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-4932        TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-4943        TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-5394        TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6186        TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6666        TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6670        TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5275        TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5279        TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A4XA        TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A4XE        TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64L        TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64R        TCGA-DB-A64S        TCGA-DB-A64U        TCGA-DB-A64V 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64W        TCGA-DB-A64X        TCGA-DB-A75K        TCGA-DB-A75L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A75M        TCGA-DB-A75O        TCGA-DB-A75P        TCGA-DH-5140 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143        TCGA-DH-5144 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D        TCGA-DH-A66F 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US        TCGA-DH-A7UT 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847        TCGA-DU-5849 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853        TCGA-DU-5854 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871        TCGA-DU-5872 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5874        TCGA-DU-6393        TCGA-DU-6394        TCGA-DU-6395 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6396        TCGA-DU-6397        TCGA-DU-6399        TCGA-DU-6400 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6401        TCGA-DU-6402        TCGA-DU-6403        TCGA-DU-6404 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6405        TCGA-DU-6406        TCGA-DU-6407        TCGA-DU-6408 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6410        TCGA-DU-6542        TCGA-DU-7006        TCGA-DU-7007 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7008        TCGA-DU-7009        TCGA-DU-7010        TCGA-DU-7011 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015        TCGA-DU-7018 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7298        TCGA-DU-7299        TCGA-DU-7300        TCGA-DU-7301 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD        TCGA-E1-A7YE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ        TCGA-E1-A7YK 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YO 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU        TCGA-E1-A7YV 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2        TCGA-E1-A7Z3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264        TCGA-F6-A8O3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963        TCGA-FG-5964 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689        TCGA-FG-6690 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634        TCGA-FG-7636 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K        TCGA-FG-A60L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3        TCGA-FG-A70Y 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711        TCGA-FG-A713 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833        TCGA-HT-7467 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8563 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8564        TCGA-HT-A4DS        TCGA-HT-A4DV        TCGA-HT-A5R5 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RA        TCGA-HT-A5RB 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A5RC        TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A617        TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A61B        TCGA-HT-A61C        TCGA-HT-A74H        TCGA-HT-A74J 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A74K        TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-7495        TCGA-HW-8319        TCGA-HW-8320        TCGA-HW-8321 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-8322        TCGA-HW-A5KJ        TCGA-HW-A5KK        TCGA-HW-A5KM 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-IK-7675        TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CW        TCGA-QH-A6CX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6CY        TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6X5        TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6XC        TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-R8-A6ML        TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-RY-A83X        TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-RY-A843        TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6TU        TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6TY        TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6U2        TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6U9        TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WE        TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WL        TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WP        TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7IX        TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7J1        TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7QX        TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7R2        TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7R8        TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A7C4        TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84B        TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84H        TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84M        TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84S        TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RH        TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RM        TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RQ        TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RV        TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VM-A8C9        TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VM-A8CE        TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VV-A86M        TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-WH-A86K        TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-WY-A85B        TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PPP2R5E MUTATED        0      2      0
  PPP2R5E WILD-TYPE    196    188    268
D178V8, multiclass
[1] "Remove cluster labels:" "PPP2R5E MUTATED"       
clus
  PPP2R5E MUTATED PPP2R5E WILD-TYPE 
                2               652 
       TCGA-02-0047        TCGA-02-0055        TCGA-02-2483        TCGA-02-2485 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-02-2486        TCGA-06-0129        TCGA-06-0130        TCGA-06-0132 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0141        TCGA-06-0157        TCGA-06-0158        TCGA-06-0168 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0174        TCGA-06-0178        TCGA-06-0184        TCGA-06-0219 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0238        TCGA-06-0644        TCGA-06-0645        TCGA-06-0646 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0649        TCGA-06-0686        TCGA-06-0743        TCGA-06-0744 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0745        TCGA-06-0747        TCGA-06-0749        TCGA-06-0750 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-0878        TCGA-06-0882        TCGA-06-1804        TCGA-06-2557 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-08-0386        TCGA-12-0616 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0821        TCGA-12-1597 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-12-5299        TCGA-14-0781        TCGA-14-0787        TCGA-14-0789 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0817        TCGA-14-1823        TCGA-14-1825 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-14-1829        TCGA-14-2554        TCGA-15-0742        TCGA-15-1444 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-16-0846        TCGA-16-1045        TCGA-19-1390        TCGA-19-2619 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1834 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-1835        TCGA-27-1837        TCGA-27-2519        TCGA-27-2521 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2528 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2499        TCGA-28-2509 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-2510        TCGA-28-2513        TCGA-28-2514        TCGA-28-5204 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5207        TCGA-28-5208        TCGA-28-5209        TCGA-28-5213 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-28-5215        TCGA-28-5216        TCGA-28-5218        TCGA-28-5220 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-1970        TCGA-32-1980        TCGA-32-1982        TCGA-32-2615 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4213 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-32-5222        TCGA-41-2571        TCGA-41-2572        TCGA-41-3915 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-41-4097        TCGA-41-5651        TCGA-76-4925        TCGA-76-4926 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-76-4932        TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-4943        TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-5394        TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6186        TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6666        TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6670        TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5275        TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5279        TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A4XA        TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A4XE        TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64L        TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64R        TCGA-DB-A64S        TCGA-DB-A64U        TCGA-DB-A64V 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64W        TCGA-DB-A64X        TCGA-DB-A75K        TCGA-DB-A75L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A75M        TCGA-DB-A75O        TCGA-DB-A75P        TCGA-DH-5140 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143        TCGA-DH-5144 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D        TCGA-DH-A66F 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US        TCGA-DH-A7UT 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847        TCGA-DU-5849 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853        TCGA-DU-5854 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871        TCGA-DU-5872 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5874        TCGA-DU-6393        TCGA-DU-6394        TCGA-DU-6395 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6396        TCGA-DU-6397        TCGA-DU-6399        TCGA-DU-6400 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6401        TCGA-DU-6402        TCGA-DU-6403        TCGA-DU-6404 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6405        TCGA-DU-6406        TCGA-DU-6407        TCGA-DU-6408 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6410        TCGA-DU-6542        TCGA-DU-7006        TCGA-DU-7007 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7008        TCGA-DU-7009        TCGA-DU-7010        TCGA-DU-7011 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015        TCGA-DU-7018 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7298        TCGA-DU-7299        TCGA-DU-7300        TCGA-DU-7301 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD        TCGA-E1-A7YE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ        TCGA-E1-A7YK 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YO 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU        TCGA-E1-A7YV 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2        TCGA-E1-A7Z3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264        TCGA-F6-A8O3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963        TCGA-FG-5964 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689        TCGA-FG-6690 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634        TCGA-FG-7636 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K        TCGA-FG-A60L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3        TCGA-FG-A70Y 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711        TCGA-FG-A713 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833        TCGA-HT-7467 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8563 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8564        TCGA-HT-A4DS        TCGA-HT-A4DV        TCGA-HT-A5R5 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RA        TCGA-HT-A5RB 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A5RC        TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A617        TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A61B        TCGA-HT-A61C        TCGA-HT-A74H        TCGA-HT-A74J 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A74K        TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-7495        TCGA-HW-8319        TCGA-HW-8320        TCGA-HW-8321 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-8322        TCGA-HW-A5KJ        TCGA-HW-A5KK        TCGA-HW-A5KM 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-IK-7675        TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CW        TCGA-QH-A6CX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6CY        TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6X5        TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6XC        TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-R8-A6ML        TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-RY-A83X        TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-RY-A843        TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6TU        TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6TY        TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6U2        TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6U9        TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WE        TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WL        TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WP        TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7IX        TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7J1        TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7QX        TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7R2        TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7R8        TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A7C4        TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84B        TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84H        TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84M        TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84S        TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RH        TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RM        TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RQ        TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RV        TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VM-A8C9        TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VM-A8CE        TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VV-A86M        TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-WH-A86K        TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-WY-A85B        TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPP2R5E MUTATED        0      2      0      0
  PPP2R5E WILD-TYPE    136    105    183     83
D178V9, multiclass
[1] "Remove cluster labels:" "PPP2R5E MUTATED"       
clus
  PPP2R5E MUTATED PPP2R5E WILD-TYPE 
                2               507 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64R 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64S        TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64X        TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75O 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A75P        TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-5143        TCGA-DH-5144        TCGA-DH-A669        TCGA-DH-A66B 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A66D        TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7UR 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A7US        TCGA-DH-A7UT        TCGA-DH-A7UU        TCGA-DH-A7UV 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5847        TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5853        TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5871        TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6393 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6394        TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6399        TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6403        TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6407        TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7006        TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7010        TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7018        TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7294        TCGA-DU-7298        TCGA-DU-7299        TCGA-DU-7300 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7301        TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7309        TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8163        TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8167        TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A5TS        TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A5TY        TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A6S7        TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A76O        TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A7TA        TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A7TG        TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-5304        TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-5318        TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YE        TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YK        TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YO        TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7Z3        TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-F6-A8O3        TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-5964        TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-6690        TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-7636        TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-7643        TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-8186        TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-8191        TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A4MX        TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A60L        TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A713        TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7467        TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7471        TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7475        TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7479        TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7483        TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7603        TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7607        TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7611        TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7677        TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7686        TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7690        TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7694        TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7856        TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7873        TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7879        TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7884        TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8012        TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8019        TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8107        TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8111        TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8563        TCGA-HT-8564        TCGA-HT-A4DS        TCGA-HT-A4DV 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A5R5        TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RA 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A5RB        TCGA-HT-A5RC        TCGA-HT-A614        TCGA-HT-A615 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A616        TCGA-HT-A617        TCGA-HT-A618        TCGA-HT-A619 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A61A        TCGA-HT-A61B        TCGA-HT-A61C        TCGA-HT-A74H 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A74K        TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-7495        TCGA-HW-8319        TCGA-HW-8320        TCGA-HW-8321 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-8322        TCGA-HW-A5KJ        TCGA-HW-A5KK        TCGA-HW-A5KM 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-IK-7675        TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CX        TCGA-QH-A6CY 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4        TCGA-QH-A6X5 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M        TCGA-RY-A83X 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840        TCGA-RY-A843 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS        TCGA-S9-A6TU 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX        TCGA-S9-A6TY 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1        TCGA-S9-A6U2 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8        TCGA-S9-A6U9 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PPP2R5E MUTATED        1      0      1
  PPP2R5E WILD-TYPE    221    184    102
D178V10, multiclass
[1] "Remove cluster labels:" "PPP2R5E MUTATED"       
clus
  PPP2R5E MUTATED PPP2R5E WILD-TYPE 
                2               507 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64R 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64S        TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64X        TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75O 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A75P        TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-5143        TCGA-DH-5144        TCGA-DH-A669        TCGA-DH-A66B 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A66D        TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7UR 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A7US        TCGA-DH-A7UT        TCGA-DH-A7UU        TCGA-DH-A7UV 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5847        TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5853        TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5871        TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6393 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6394        TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6399        TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6403        TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6407        TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7006        TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7010        TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7018        TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7294        TCGA-DU-7298        TCGA-DU-7299        TCGA-DU-7300 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7301        TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7309        TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8163        TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8167        TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A5TS        TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A5TY        TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A6S7        TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A76O        TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A7TA        TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A7TG        TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-5304        TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-5318        TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YE        TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YK        TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YO        TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7Z3        TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-F6-A8O3        TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-5964        TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-6690        TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-7636        TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-7643        TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-8186        TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-8191        TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A4MX        TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A60L        TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A713        TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7467        TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7471        TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7475        TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7479        TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7483        TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7603        TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7607        TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7611        TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7677        TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7686        TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7690        TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7694        TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7856        TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7873        TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7879        TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7884        TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8012        TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8019        TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8107        TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8111        TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8563        TCGA-HT-8564        TCGA-HT-A4DS        TCGA-HT-A4DV 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A5R5        TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RA 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A5RB        TCGA-HT-A5RC        TCGA-HT-A614        TCGA-HT-A615 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A616        TCGA-HT-A617        TCGA-HT-A618        TCGA-HT-A619 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A61A        TCGA-HT-A61B        TCGA-HT-A61C        TCGA-HT-A74H 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A74K        TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-7495        TCGA-HW-8319        TCGA-HW-8320        TCGA-HW-8321 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-8322        TCGA-HW-A5KJ        TCGA-HW-A5KK        TCGA-HW-A5KM 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-IK-7675        TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CX        TCGA-QH-A6CY 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4        TCGA-QH-A6X5 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M        TCGA-RY-A83X 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840        TCGA-RY-A843 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS        TCGA-S9-A6TU 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX        TCGA-S9-A6TY 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1        TCGA-S9-A6U2 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8        TCGA-S9-A6U9 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PPP2R5E MUTATED        0      1      1
  PPP2R5E WILD-TYPE    184    161    158
D178V11, multiclass
[1] "Remove cluster labels:" "PPP2R5E MUTATED"       
clus
  PPP2R5E MUTATED PPP2R5E WILD-TYPE 
                2               503 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA        TCGA-DB-A4XB 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE        TCGA-DB-A4XF 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L        TCGA-DB-A64O 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64R        TCGA-DB-A64S 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75O        TCGA-DB-A75P 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-5144        TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A7UT        TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6393        TCGA-DU-6394 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397        TCGA-DU-6399 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402        TCGA-DU-6403 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406        TCGA-DU-6407 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542        TCGA-DU-7006 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009        TCGA-DU-7010 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015        TCGA-DU-7018 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7298        TCGA-DU-7299        TCGA-DU-7300        TCGA-DU-7301 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD        TCGA-E1-A7YE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ        TCGA-E1-A7YK 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YO 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU        TCGA-E1-A7YV 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2        TCGA-E1-A7Z3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264        TCGA-F6-A8O3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963        TCGA-FG-5964 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689        TCGA-FG-6690 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634        TCGA-FG-7636 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K        TCGA-FG-A60L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3        TCGA-FG-A70Y 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711        TCGA-FG-A713 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833        TCGA-HT-7467 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8563 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8564        TCGA-HT-A4DS        TCGA-HT-A4DV        TCGA-HT-A5R5 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RA        TCGA-HT-A5RB 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A5RC        TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A617        TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A61B        TCGA-HT-A61C        TCGA-HT-A74H        TCGA-HT-A74K 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486        TCGA-HW-7487 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491        TCGA-HW-7495 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-8319        TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-A5KJ        TCGA-HW-A5KK        TCGA-HW-A5KM        TCGA-IK-7675 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1        TCGA-P5-A5ET 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW        TCGA-P5-A5EX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0        TCGA-P5-A5F1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A72U        TCGA-P5-A72W 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A72X        TCGA-P5-A72Z        TCGA-P5-A730        TCGA-P5-A731 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A733        TCGA-P5-A735        TCGA-P5-A737        TCGA-P5-A77W 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A77X        TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A65S        TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6CS        TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6CY        TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6X5        TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6XC        TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-R8-A6ML        TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-RY-A83X        TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-RY-A843        TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6TU        TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6TY        TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6U2        TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPP2R5E MUTATED        1      0      1      0
  PPP2R5E WILD-TYPE     89    138    187     89
D178V12, multiclass
[1] "Remove cluster labels:" "PPP2R5E MUTATED"       
clus
  PPP2R5E MUTATED PPP2R5E WILD-TYPE 
                2               503 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA        TCGA-DB-A4XB 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE        TCGA-DB-A4XF 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L        TCGA-DB-A64O 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64R        TCGA-DB-A64S 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75O        TCGA-DB-A75P 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-5144        TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DH-A7UT        TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6393        TCGA-DU-6394 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397        TCGA-DU-6399 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402        TCGA-DU-6403 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406        TCGA-DU-6407 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542        TCGA-DU-7006 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009        TCGA-DU-7010 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7015        TCGA-DU-7018 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7298        TCGA-DU-7299        TCGA-DU-7300        TCGA-DU-7301 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD        TCGA-E1-A7YE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ        TCGA-E1-A7YK 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YO 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU        TCGA-E1-A7YV 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2        TCGA-E1-A7Z3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264        TCGA-F6-A8O3 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963        TCGA-FG-5964 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689        TCGA-FG-6690 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634        TCGA-FG-7636 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K        TCGA-FG-A60L 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3        TCGA-FG-A70Y 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711        TCGA-FG-A713 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833        TCGA-HT-7467 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8563 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-8564        TCGA-HT-A4DS        TCGA-HT-A4DV        TCGA-HT-A5R5 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RA        TCGA-HT-A5RB 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A5RC        TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A617        TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A61B        TCGA-HT-A61C        TCGA-HT-A74H        TCGA-HT-A74K 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486        TCGA-HW-7487 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491        TCGA-HW-7495 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-8319        TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-HW-A5KJ        TCGA-HW-A5KK        TCGA-HW-A5KM        TCGA-IK-7675 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1        TCGA-P5-A5ET 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW        TCGA-P5-A5EX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0        TCGA-P5-A5F1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A72U        TCGA-P5-A72W 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A72X        TCGA-P5-A72Z        TCGA-P5-A730        TCGA-P5-A731 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A733        TCGA-P5-A735        TCGA-P5-A737        TCGA-P5-A77W 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-P5-A77X        TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A65S        TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6CS        TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6CY        TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6X5        TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-QH-A6XC        TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-R8-A6ML        TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-RY-A83X        TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-RY-A843        TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6TU        TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6TY        TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6U2        TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 
       TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" "PPP2R5E WILD-TYPE" 

Clustering(179) Variable = ZC3H11A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H11A MUTATED        0      0      0      0
  ZC3H11A WILD-TYPE     69     43     74     54
D179V1, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H11A MUTATED        0      0      0      0
  ZC3H11A WILD-TYPE     63     50     48     79
D179V2, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H11A MUTATED        0      0      0      0
  ZC3H11A WILD-TYPE     77     93     45     60
D179V3, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZC3H11A MUTATED        0      0      0
  ZC3H11A WILD-TYPE    138     61     76
D179V4, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZC3H11A MUTATED        3      2      0
  ZC3H11A WILD-TYPE    292    479      7
D179V5, multiclass
        clus
vv       ZC3H11A MUTATED ZC3H11A WILD-TYPE
  CLUS_1               3               292
  CLUS_2               2               479
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H11A MUTATED        4      0      1      0
  ZC3H11A WILD-TYPE    156    232     63    166
D179V6, multiclass
        clus
vv       ZC3H11A MUTATED ZC3H11A WILD-TYPE
  CLUS_1               4               156
  CLUS_2               0               232
  CLUS_3               1                63
  CLUS_4               0               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZC3H11A MUTATED        5      0      0
  ZC3H11A WILD-TYPE    222    235    192
D179V7, multiclass
        clus
vv       ZC3H11A MUTATED ZC3H11A WILD-TYPE
  CLUS_1               5               222
  CLUS_2               0               235
  CLUS_3               0               192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZC3H11A MUTATED        4      1      0
  ZC3H11A WILD-TYPE    192    189    268
D179V8, multiclass
        clus
vv       ZC3H11A MUTATED ZC3H11A WILD-TYPE
  CLUS_1               4               192
  CLUS_2               1               189
  CLUS_3               0               268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H11A MUTATED        1      3      1      0
  ZC3H11A WILD-TYPE    135    104    182     83
D179V9, multiclass
        clus
vv       ZC3H11A MUTATED ZC3H11A WILD-TYPE
  CLUS_1               1               135
  CLUS_2               3               104
  CLUS_3               1               182
  CLUS_4               0                83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZC3H11A MUTATED        1      0      4
  ZC3H11A WILD-TYPE    221    184     99
D179V10, multiclass
        clus
vv       ZC3H11A MUTATED ZC3H11A WILD-TYPE
  CLUS_1               1               221
  CLUS_2               0               184
  CLUS_3               4                99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZC3H11A MUTATED        3      0      2
  ZC3H11A WILD-TYPE    181    162    157
D179V11, multiclass
        clus
vv       ZC3H11A MUTATED ZC3H11A WILD-TYPE
  CLUS_1               3               181
  CLUS_2               0               162
  CLUS_3               2               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H11A MUTATED        1      0      1      3
  ZC3H11A WILD-TYPE     89    138    187     86
D179V12, multiclass
        clus
vv       ZC3H11A MUTATED ZC3H11A WILD-TYPE
  CLUS_1               1                89
  CLUS_2               0               138
  CLUS_3               1               187
  CLUS_4               3                86
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(180) Variable = DST MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DST MUTATED        2      0      1      1
  DST WILD-TYPE     67     43     73     53
D180V1, multiclass
        clus
vv       DST MUTATED DST WILD-TYPE
  CLUS_1           2            67
  CLUS_2           0            43
  CLUS_3           1            73
  CLUS_4           1            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DST MUTATED        1      1      1      1
  DST WILD-TYPE     62     49     47     78
D180V2, multiclass
        clus
vv       DST MUTATED DST WILD-TYPE
  CLUS_1           1            62
  CLUS_2           1            49
  CLUS_3           1            47
  CLUS_4           1            78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DST MUTATED        2      0      0      2
  DST WILD-TYPE     75     93     45     58
D180V3, multiclass
        clus
vv       DST MUTATED DST WILD-TYPE
  CLUS_1           2            75
  CLUS_2           0            93
  CLUS_3           0            45
  CLUS_4           2            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DST MUTATED        3      0      1
  DST WILD-TYPE    135     61     75
D180V4, multiclass
        clus
vv       DST MUTATED DST WILD-TYPE
  CLUS_1           3           135
  CLUS_2           0            61
  CLUS_3           1            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DST MUTATED        5     10      0
  DST WILD-TYPE    290    471      7
D180V5, multiclass
        clus
vv       DST MUTATED DST WILD-TYPE
  CLUS_1           5           290
  CLUS_2          10           471
  CLUS_3           0             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DST MUTATED        2      4      1      5
  DST WILD-TYPE    158    228     63    161
D180V6, multiclass
        clus
vv       DST MUTATED DST WILD-TYPE
  CLUS_1           2           158
  CLUS_2           4           228
  CLUS_3           1            63
  CLUS_4           5           161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DST MUTATED        6      5      5
  DST WILD-TYPE    221    230    187
D180V7, multiclass
        clus
vv       DST MUTATED DST WILD-TYPE
  CLUS_1           6           221
  CLUS_2           5           230
  CLUS_3           5           187
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DST MUTATED        5      4      7
  DST WILD-TYPE    191    186    261
D180V8, multiclass
        clus
vv       DST MUTATED DST WILD-TYPE
  CLUS_1           5           191
  CLUS_2           4           186
  CLUS_3           7           261
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DST MUTATED        2      5      4      1
  DST WILD-TYPE    134    102    179     82
D180V9, multiclass
        clus
vv       DST MUTATED DST WILD-TYPE
  CLUS_1           2           134
  CLUS_2           5           102
  CLUS_3           4           179
  CLUS_4           1            82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DST MUTATED        5      5      2
  DST WILD-TYPE    217    179    101
D180V10, multiclass
        clus
vv       DST MUTATED DST WILD-TYPE
  CLUS_1           5           217
  CLUS_2           5           179
  CLUS_3           2           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DST MUTATED        3      3      6
  DST WILD-TYPE    181    159    153
D180V11, multiclass
        clus
vv       DST MUTATED DST WILD-TYPE
  CLUS_1           3           181
  CLUS_2           3           159
  CLUS_3           6           153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DST MUTATED        3      1      7      1
  DST WILD-TYPE     87    137    181     88
D180V12, multiclass
        clus
vv       DST MUTATED DST WILD-TYPE
  CLUS_1           3            87
  CLUS_2           1           137
  CLUS_3           7           181
  CLUS_4           1            88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(181) Variable = NKPD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKPD1 MUTATED        0      0      0      0
  NKPD1 WILD-TYPE     69     43     74     54
D181V1, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKPD1 MUTATED        0      0      0      0
  NKPD1 WILD-TYPE     63     50     48     79
D181V2, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKPD1 MUTATED        0      0      0      0
  NKPD1 WILD-TYPE     77     93     45     60
D181V3, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NKPD1 MUTATED        0      0      0
  NKPD1 WILD-TYPE    138     61     76
D181V4, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NKPD1 MUTATED        0      2      1
  NKPD1 WILD-TYPE    295    479      6
D181V5, multiclass
        clus
vv       NKPD1 MUTATED NKPD1 WILD-TYPE
  CLUS_1             0             295
  CLUS_2             2             479
  CLUS_3             1               6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKPD1 MUTATED        0      2      1      0
  NKPD1 WILD-TYPE    160    230     63    166
D181V6, multiclass
        clus
vv       NKPD1 MUTATED NKPD1 WILD-TYPE
  CLUS_1             0             160
  CLUS_2             2             230
  CLUS_3             1              63
  CLUS_4             0             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NKPD1 MUTATED        1      1      1
  NKPD1 WILD-TYPE    226    234    191
D181V7, multiclass
        clus
vv       NKPD1 MUTATED NKPD1 WILD-TYPE
  CLUS_1             1             226
  CLUS_2             1             234
  CLUS_3             1             191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NKPD1 MUTATED        0      2      1
  NKPD1 WILD-TYPE    196    188    267
D181V8, multiclass
        clus
vv       NKPD1 MUTATED NKPD1 WILD-TYPE
  CLUS_1             0             196
  CLUS_2             2             188
  CLUS_3             1             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKPD1 MUTATED        0      1      2      0
  NKPD1 WILD-TYPE    136    106    181     83
D181V9, multiclass
        clus
vv       NKPD1 MUTATED NKPD1 WILD-TYPE
  CLUS_1             0             136
  CLUS_2             1             106
  CLUS_3             2             181
  CLUS_4             0              83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NKPD1 MUTATED        1      1      1
  NKPD1 WILD-TYPE    221    183    102
D181V10, multiclass
        clus
vv       NKPD1 MUTATED NKPD1 WILD-TYPE
  CLUS_1             1             221
  CLUS_2             1             183
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NKPD1 MUTATED        0      1      2
  NKPD1 WILD-TYPE    184    161    157
D181V11, multiclass
        clus
vv       NKPD1 MUTATED NKPD1 WILD-TYPE
  CLUS_1             0             184
  CLUS_2             1             161
  CLUS_3             2             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKPD1 MUTATED        0      1      1      1
  NKPD1 WILD-TYPE     90    137    187     88
D181V12, multiclass
        clus
vv       NKPD1 MUTATED NKPD1 WILD-TYPE
  CLUS_1             0              90
  CLUS_2             1             137
  CLUS_3             1             187
  CLUS_4             1              88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(182) Variable = CTBP2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTBP2 MUTATED        1      1      0      0
  CTBP2 WILD-TYPE     68     42     74     54
D182V1, multiclass
[1] "Remove cluster labels:" "CTBP2 MUTATED"         
clus
  CTBP2 MUTATED CTBP2 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0645      TCGA-06-0646 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-6191 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTBP2 MUTATED        1      0      0      1
  CTBP2 WILD-TYPE     62     50     48     78
D182V2, multiclass
[1] "Remove cluster labels:" "CTBP2 MUTATED"         
clus
  CTBP2 MUTATED CTBP2 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0645      TCGA-06-0646 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-6191 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTBP2 MUTATED        1      0      1      0
  CTBP2 WILD-TYPE     76     93     44     60
D182V3, multiclass
[1] "Remove cluster labels:" "CTBP2 MUTATED"         
clus
  CTBP2 MUTATED CTBP2 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0645      TCGA-06-0646 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-6191 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-87-5896 
"CTBP2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CTBP2 MUTATED        1      1      0
  CTBP2 WILD-TYPE    137     60     76
D182V4, multiclass
[1] "Remove cluster labels:" "CTBP2 MUTATED"         
clus
  CTBP2 MUTATED CTBP2 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0645      TCGA-06-0646 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-6191 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-87-5896 
"CTBP2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CTBP2 MUTATED        2      1      0
  CTBP2 WILD-TYPE    293    480      7
D182V5, multiclass
        clus
vv       CTBP2 MUTATED CTBP2 WILD-TYPE
  CLUS_1             2             293
  CLUS_2             1             480
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTBP2 MUTATED        1      1      0      0
  CTBP2 WILD-TYPE    159    231     64    166
D182V6, multiclass
[1] "Remove cluster labels:" "CTBP2 MUTATED"         
clus
  CTBP2 MUTATED CTBP2 WILD-TYPE 
              2             620 
     TCGA-06-0152      TCGA-06-0650      TCGA-06-1804      TCGA-06-1806 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0862      TCGA-14-1043      TCGA-14-1395 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-1450      TCGA-15-1444      TCGA-19-5947      TCGA-19-5950 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-6174      TCGA-28-2501      TCGA-28-2510      TCGA-28-5204 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5211 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-5222      TCGA-41-5651 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-6191      TCGA-76-6192 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-6193      TCGA-76-6280      TCGA-76-6282      TCGA-76-6283 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-6285      TCGA-76-6286      TCGA-76-6656      TCGA-76-6657 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-6660      TCGA-76-6661      TCGA-76-6662      TCGA-76-6663 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-6664      TCGA-81-5910      TCGA-81-5911      TCGA-87-5896 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A7C3      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CTBP2 MUTATED        1      0      1
  CTBP2 WILD-TYPE    226    235    191
D182V7, multiclass
[1] "Remove cluster labels:" "CTBP2 MUTATED"         
clus
  CTBP2 MUTATED CTBP2 WILD-TYPE 
              2             652 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0645      TCGA-06-0646      TCGA-06-0649 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0878 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-1804      TCGA-06-2557      TCGA-06-2558 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2561      TCGA-06-2562      TCGA-06-2563 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2564      TCGA-06-2565      TCGA-06-2567      TCGA-06-2569 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2570      TCGA-06-5408      TCGA-06-5410      TCGA-06-5411 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5412      TCGA-06-5413      TCGA-06-5414      TCGA-06-5415 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5417      TCGA-06-5418      TCGA-06-5856      TCGA-06-5858 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5859      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0821      TCGA-12-1597      TCGA-12-3650 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-0817      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-2554      TCGA-15-0742      TCGA-15-1444      TCGA-16-0846 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-16-1045      TCGA-19-1390      TCGA-19-2619      TCGA-19-2620 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-2624      TCGA-19-2625      TCGA-19-2629      TCGA-19-5960 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1834      TCGA-27-1835 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2528      TCGA-28-1747 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2499      TCGA-28-2509      TCGA-28-2510 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5213      TCGA-28-5215 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5220      TCGA-32-1970 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-2615      TCGA-32-2632 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4213      TCGA-32-5222 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-3915      TCGA-41-4097 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-5651      TCGA-76-4925      TCGA-76-4926      TCGA-76-4927 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-4928      TCGA-76-4929      TCGA-76-4931      TCGA-76-4932 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A7C3      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CTBP2 MUTATED        1      0      1
  CTBP2 WILD-TYPE    195    190    267
D182V8, multiclass
[1] "Remove cluster labels:" "CTBP2 MUTATED"         
clus
  CTBP2 MUTATED CTBP2 WILD-TYPE 
              2             652 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0645      TCGA-06-0646      TCGA-06-0649 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0878 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-1804      TCGA-06-2557      TCGA-06-2558 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2561      TCGA-06-2562      TCGA-06-2563 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2564      TCGA-06-2565      TCGA-06-2567      TCGA-06-2569 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-2570      TCGA-06-5408      TCGA-06-5410      TCGA-06-5411 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5412      TCGA-06-5413      TCGA-06-5414      TCGA-06-5415 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5417      TCGA-06-5418      TCGA-06-5856      TCGA-06-5858 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-06-5859      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0821      TCGA-12-1597      TCGA-12-3650 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-0817      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-14-2554      TCGA-15-0742      TCGA-15-1444      TCGA-16-0846 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-16-1045      TCGA-19-1390      TCGA-19-2619      TCGA-19-2620 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-19-2624      TCGA-19-2625      TCGA-19-2629      TCGA-19-5960 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1834      TCGA-27-1835 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2528      TCGA-28-1747 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2499      TCGA-28-2509      TCGA-28-2510 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5213      TCGA-28-5215 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5220      TCGA-32-1970 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-2615      TCGA-32-2632 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4213      TCGA-32-5222 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-3915      TCGA-41-4097 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-41-5651      TCGA-76-4925      TCGA-76-4926      TCGA-76-4927 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-76-4928      TCGA-76-4929      TCGA-76-4931      TCGA-76-4932 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015      TCGA-DU-7018 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74J 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A7C3      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTBP2 MUTATED        0      0      1      0
  CTBP2 WILD-TYPE    136    107    182     83
D182V9, multiclass
[1] "Remove cluster labels:" "CTBP2 MUTATED"         
clus
  CTBP2 MUTATED CTBP2 WILD-TYPE 
              1             508 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A7C3      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CTBP2 MUTATED        0      1      0
  CTBP2 WILD-TYPE    222    183    103
D182V10, multiclass
[1] "Remove cluster labels:" "CTBP2 MUTATED"         
clus
  CTBP2 MUTATED CTBP2 WILD-TYPE 
              1             508 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A7C3      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CTBP2 MUTATED        0      0      1
  CTBP2 WILD-TYPE    184    162    158
D182V11, multiclass
[1] "Remove cluster labels:" "CTBP2 MUTATED"         
clus
  CTBP2 MUTATED CTBP2 WILD-TYPE 
              1             504 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6UA      TCGA-S9-A6UB 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A7C3      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTBP2 MUTATED        0      0      1      0
  CTBP2 WILD-TYPE     90    138    187     89
D182V12, multiclass
[1] "Remove cluster labels:" "CTBP2 MUTATED"         
clus
  CTBP2 MUTATED CTBP2 WILD-TYPE 
              1             504 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7015 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6UA      TCGA-S9-A6UB 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A7C3      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" "CTBP2 WILD-TYPE" 

Clustering(183) Variable = SEC14L4 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEC14L4 MUTATED        0      0      0      0
  SEC14L4 WILD-TYPE     69     43     74     54
D183V1, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEC14L4 MUTATED        0      0      0      0
  SEC14L4 WILD-TYPE     63     50     48     79
D183V2, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEC14L4 MUTATED        0      0      0      0
  SEC14L4 WILD-TYPE     77     93     45     60
D183V3, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SEC14L4 MUTATED        0      0      0
  SEC14L4 WILD-TYPE    138     61     76
D183V4, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SEC14L4 MUTATED        0      2      1
  SEC14L4 WILD-TYPE    295    479      6
D183V5, multiclass
        clus
vv       SEC14L4 MUTATED SEC14L4 WILD-TYPE
  CLUS_1               0               295
  CLUS_2               2               479
  CLUS_3               1                 6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEC14L4 MUTATED        1      2      0      0
  SEC14L4 WILD-TYPE    159    230     64    166
D183V6, multiclass
        clus
vv       SEC14L4 MUTATED SEC14L4 WILD-TYPE
  CLUS_1               1               159
  CLUS_2               2               230
  CLUS_3               0                64
  CLUS_4               0               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SEC14L4 MUTATED        2      1      0
  SEC14L4 WILD-TYPE    225    234    192
D183V7, multiclass
        clus
vv       SEC14L4 MUTATED SEC14L4 WILD-TYPE
  CLUS_1               2               225
  CLUS_2               1               234
  CLUS_3               0               192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SEC14L4 MUTATED        1      2      0
  SEC14L4 WILD-TYPE    195    188    268
D183V8, multiclass
        clus
vv       SEC14L4 MUTATED SEC14L4 WILD-TYPE
  CLUS_1               1               195
  CLUS_2               2               188
  CLUS_3               0               268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEC14L4 MUTATED        1      2      0      0
  SEC14L4 WILD-TYPE    135    105    183     83
D183V9, multiclass
        clus
vv       SEC14L4 MUTATED SEC14L4 WILD-TYPE
  CLUS_1               1               135
  CLUS_2               2               105
  CLUS_3               0               183
  CLUS_4               0                83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SEC14L4 MUTATED        1      0      2
  SEC14L4 WILD-TYPE    221    184    101
D183V10, multiclass
        clus
vv       SEC14L4 MUTATED SEC14L4 WILD-TYPE
  CLUS_1               1               221
  CLUS_2               0               184
  CLUS_3               2               101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SEC14L4 MUTATED        3      0      0
  SEC14L4 WILD-TYPE    181    162    159
D183V11, multiclass
        clus
vv       SEC14L4 MUTATED SEC14L4 WILD-TYPE
  CLUS_1               3               181
  CLUS_2               0               162
  CLUS_3               0               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEC14L4 MUTATED        1      0      0      2
  SEC14L4 WILD-TYPE     89    138    188     87
D183V12, multiclass
        clus
vv       SEC14L4 MUTATED SEC14L4 WILD-TYPE
  CLUS_1               1                89
  CLUS_2               0               138
  CLUS_3               0               188
  CLUS_4               2                87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(184) Variable = KEL MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KEL MUTATED        3      3      7      2
  KEL WILD-TYPE     66     40     67     52
D184V1, multiclass
        clus
vv       KEL MUTATED KEL WILD-TYPE
  CLUS_1           3            66
  CLUS_2           3            40
  CLUS_3           7            67
  CLUS_4           2            52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KEL MUTATED        3      1      6      5
  KEL WILD-TYPE     60     49     42     74
D184V2, multiclass
        clus
vv       KEL MUTATED KEL WILD-TYPE
  CLUS_1           3            60
  CLUS_2           1            49
  CLUS_3           6            42
  CLUS_4           5            74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KEL MUTATED        3      5      2      5
  KEL WILD-TYPE     74     88     43     55
D184V3, multiclass
        clus
vv       KEL MUTATED KEL WILD-TYPE
  CLUS_1           3            74
  CLUS_2           5            88
  CLUS_3           2            43
  CLUS_4           5            55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KEL MUTATED        7      3      5
  KEL WILD-TYPE    131     58     71
D184V4, multiclass
        clus
vv       KEL MUTATED KEL WILD-TYPE
  CLUS_1           7           131
  CLUS_2           3            58
  CLUS_3           5            71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KEL MUTATED       18      6      0
  KEL WILD-TYPE    277    475      7
D184V5, multiclass
        clus
vv       KEL MUTATED KEL WILD-TYPE
  CLUS_1          18           277
  CLUS_2           6           475
  CLUS_3           0             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KEL MUTATED       12      2      1      2
  KEL WILD-TYPE    148    230     63    164
D184V6, multiclass
        clus
vv       KEL MUTATED KEL WILD-TYPE
  CLUS_1          12           148
  CLUS_2           2           230
  CLUS_3           1            63
  CLUS_4           2           164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KEL MUTATED       16      1      2
  KEL WILD-TYPE    211    234    190
D184V7, multiclass
        clus
vv       KEL MUTATED KEL WILD-TYPE
  CLUS_1          16           211
  CLUS_2           1           234
  CLUS_3           2           190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KEL MUTATED       13      3      3
  KEL WILD-TYPE    183    187    265
D184V8, multiclass
        clus
vv       KEL MUTATED KEL WILD-TYPE
  CLUS_1          13           183
  CLUS_2           3           187
  CLUS_3           3           265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KEL MUTATED        3      5      1      0
  KEL WILD-TYPE    133    102    182     83
D184V9, multiclass
        clus
vv       KEL MUTATED KEL WILD-TYPE
  CLUS_1           3           133
  CLUS_2           5           102
  CLUS_3           1           182
  CLUS_4           0            83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KEL MUTATED        2      0      7
  KEL WILD-TYPE    220    184     96
D184V10, multiclass
        clus
vv       KEL MUTATED KEL WILD-TYPE
  CLUS_1           2           220
  CLUS_2           0           184
  CLUS_3           7            96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KEL MUTATED        6      1      2
  KEL WILD-TYPE    178    161    157
D184V11, multiclass
        clus
vv       KEL MUTATED KEL WILD-TYPE
  CLUS_1           6           178
  CLUS_2           1           161
  CLUS_3           2           157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KEL MUTATED        0      1      2      6
  KEL WILD-TYPE     90    137    186     83
D184V12, multiclass
        clus
vv       KEL MUTATED KEL WILD-TYPE
  CLUS_1           0            90
  CLUS_2           1           137
  CLUS_3           2           186
  CLUS_4           6            83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(185) Variable = SSTR4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SSTR4 MUTATED        2      0      2      0
  SSTR4 WILD-TYPE     67     43     72     54
D185V1, multiclass
        clus
vv       SSTR4 MUTATED SSTR4 WILD-TYPE
  CLUS_1             2              67
  CLUS_2             0              43
  CLUS_3             2              72
  CLUS_4             0              54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SSTR4 MUTATED        2      0      1      1
  SSTR4 WILD-TYPE     61     50     47     78
D185V2, multiclass
        clus
vv       SSTR4 MUTATED SSTR4 WILD-TYPE
  CLUS_1             2              61
  CLUS_2             0              50
  CLUS_3             1              47
  CLUS_4             1              78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SSTR4 MUTATED        2      0      1      1
  SSTR4 WILD-TYPE     75     93     44     59
D185V3, multiclass
        clus
vv       SSTR4 MUTATED SSTR4 WILD-TYPE
  CLUS_1             2              75
  CLUS_2             0              93
  CLUS_3             1              44
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SSTR4 MUTATED        2      2      0
  SSTR4 WILD-TYPE    136     59     76
D185V4, multiclass
        clus
vv       SSTR4 MUTATED SSTR4 WILD-TYPE
  CLUS_1             2             136
  CLUS_2             2              59
  CLUS_3             0              76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SSTR4 MUTATED        5      6      0
  SSTR4 WILD-TYPE    290    475      7
D185V5, multiclass
        clus
vv       SSTR4 MUTATED SSTR4 WILD-TYPE
  CLUS_1             5             290
  CLUS_2             6             475
  CLUS_3             0               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SSTR4 MUTATED        4      3      0      1
  SSTR4 WILD-TYPE    156    229     64    165
D185V6, multiclass
        clus
vv       SSTR4 MUTATED SSTR4 WILD-TYPE
  CLUS_1             4             156
  CLUS_2             3             229
  CLUS_3             0              64
  CLUS_4             1             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SSTR4 MUTATED        5      1      3
  SSTR4 WILD-TYPE    222    234    189
D185V7, multiclass
        clus
vv       SSTR4 MUTATED SSTR4 WILD-TYPE
  CLUS_1             5             222
  CLUS_2             1             234
  CLUS_3             3             189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SSTR4 MUTATED        4      3      2
  SSTR4 WILD-TYPE    192    187    266
D185V8, multiclass
        clus
vv       SSTR4 MUTATED SSTR4 WILD-TYPE
  CLUS_1             4             192
  CLUS_2             3             187
  CLUS_3             2             266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SSTR4 MUTATED        2      2      3      0
  SSTR4 WILD-TYPE    134    105    180     83
D185V9, multiclass
        clus
vv       SSTR4 MUTATED SSTR4 WILD-TYPE
  CLUS_1             2             134
  CLUS_2             2             105
  CLUS_3             3             180
  CLUS_4             0              83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SSTR4 MUTATED        2      2      3
  SSTR4 WILD-TYPE    220    182    100
D185V10, multiclass
        clus
vv       SSTR4 MUTATED SSTR4 WILD-TYPE
  CLUS_1             2             220
  CLUS_2             2             182
  CLUS_3             3             100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SSTR4 MUTATED        3      1      3
  SSTR4 WILD-TYPE    181    161    156
D185V11, multiclass
        clus
vv       SSTR4 MUTATED SSTR4 WILD-TYPE
  CLUS_1             3             181
  CLUS_2             1             161
  CLUS_3             3             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SSTR4 MUTATED        1      2      2      2
  SSTR4 WILD-TYPE     89    136    186     87
D185V12, multiclass
        clus
vv       SSTR4 MUTATED SSTR4 WILD-TYPE
  CLUS_1             1              89
  CLUS_2             2             136
  CLUS_3             2             186
  CLUS_4             2              87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(186) Variable = SMARCB1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCB1 MUTATED        0      0      0      0
  SMARCB1 WILD-TYPE     69     43     74     54
D186V1, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCB1 MUTATED        0      0      0      0
  SMARCB1 WILD-TYPE     63     50     48     79
D186V2, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCB1 MUTATED        0      0      0      0
  SMARCB1 WILD-TYPE     77     93     45     60
D186V3, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCB1 MUTATED        0      0      0
  SMARCB1 WILD-TYPE    138     61     76
D186V4, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCB1 MUTATED        0      4      0
  SMARCB1 WILD-TYPE    295    477      7
D186V5, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               0               295
  CLUS_2               4               477
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCB1 MUTATED        1      2      0      1
  SMARCB1 WILD-TYPE    159    230     64    165
D186V6, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               1               159
  CLUS_2               2               230
  CLUS_3               0                64
  CLUS_4               1               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCB1 MUTATED        1      1      2
  SMARCB1 WILD-TYPE    226    234    190
D186V7, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               1               226
  CLUS_2               1               234
  CLUS_3               2               190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCB1 MUTATED        0      3      1
  SMARCB1 WILD-TYPE    196    187    267
D186V8, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               0               196
  CLUS_2               3               187
  CLUS_3               1               267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCB1 MUTATED        0      1      3      0
  SMARCB1 WILD-TYPE    136    106    180     83
D186V9, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               0               136
  CLUS_2               1               106
  CLUS_3               3               180
  CLUS_4               0                83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCB1 MUTATED        1      2      1
  SMARCB1 WILD-TYPE    221    182    102
D186V10, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               1               221
  CLUS_2               2               182
  CLUS_3               1               102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCB1 MUTATED        0      1      3
  SMARCB1 WILD-TYPE    184    161    156
D186V11, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               0               184
  CLUS_2               1               161
  CLUS_3               3               156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCB1 MUTATED        1      0      3      0
  SMARCB1 WILD-TYPE     89    138    185     89
D186V12, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               1                89
  CLUS_2               0               138
  CLUS_3               3               185
  CLUS_4               0                89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(187) Variable = CAPN11 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CAPN11 MUTATED        0      0      1      1
  CAPN11 WILD-TYPE     69     43     73     53
D187V1, multiclass
[1] "Remove cluster labels:" "CAPN11 MUTATED"        
clus
  CAPN11 MUTATED CAPN11 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-2491 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CAPN11 MUTATED        0      1      1      0
  CAPN11 WILD-TYPE     63     49     47     79
D187V2, multiclass
[1] "Remove cluster labels:" "CAPN11 MUTATED"        
clus
  CAPN11 MUTATED CAPN11 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-2491 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CAPN11 MUTATED        1      1      0      0
  CAPN11 WILD-TYPE     76     92     45     60
D187V3, multiclass
[1] "Remove cluster labels:" "CAPN11 MUTATED"        
clus
  CAPN11 MUTATED CAPN11 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-87-5896 
"CAPN11 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CAPN11 MUTATED        1      0      1
  CAPN11 WILD-TYPE    137     61     75
D187V4, multiclass
[1] "Remove cluster labels:" "CAPN11 MUTATED"        
clus
  CAPN11 MUTATED CAPN11 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" "CAPN11 WILD-TYPE" 
      TCGA-87-5896 
"CAPN11 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CAPN11 MUTATED        2      3      0
  CAPN11 WILD-TYPE    293    478      7
D187V5, multiclass
        clus
vv       CAPN11 MUTATED CAPN11 WILD-TYPE
  CLUS_1              2              293
  CLUS_2              3              478
  CLUS_3              0                7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CAPN11 MUTATED        1      2      0      0
  CAPN11 WILD-TYPE    159    230     64    166
D187V6, multiclass
        clus
vv       CAPN11 MUTATED CAPN11 WILD-TYPE
  CLUS_1              1              159
  CLUS_2              2              230
  CLUS_3              0               64
  CLUS_4              0              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CAPN11 MUTATED        2      1      1
  CAPN11 WILD-TYPE    225    234    191
D187V7, multiclass
        clus
vv       CAPN11 MUTATED CAPN11 WILD-TYPE
  CLUS_1              2              225
  CLUS_2              1              234
  CLUS_3              1              191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CAPN11 MUTATED        0      2      2
  CAPN11 WILD-TYPE    196    188    266
D187V8, multiclass
        clus
vv       CAPN11 MUTATED CAPN11 WILD-TYPE
  CLUS_1              0              196
  CLUS_2              2              188
  CLUS_3              2              266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CAPN11 MUTATED        0      1      1      1
  CAPN11 WILD-TYPE    136    106    182     82
D187V9, multiclass
        clus
vv       CAPN11 MUTATED CAPN11 WILD-TYPE
  CLUS_1              0              136
  CLUS_2              1              106
  CLUS_3              1              182
  CLUS_4              1               82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CAPN11 MUTATED        1      1      1
  CAPN11 WILD-TYPE    221    183    102
D187V10, multiclass
        clus
vv       CAPN11 MUTATED CAPN11 WILD-TYPE
  CLUS_1              1              221
  CLUS_2              1              183
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CAPN11 MUTATED        0      1      2
  CAPN11 WILD-TYPE    184    161    157
D187V11, multiclass
        clus
vv       CAPN11 MUTATED CAPN11 WILD-TYPE
  CLUS_1              0              184
  CLUS_2              1              161
  CLUS_3              2              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CAPN11 MUTATED        0      1      2      0
  CAPN11 WILD-TYPE     90    137    186     89
D187V12, multiclass
        clus
vv       CAPN11 MUTATED CAPN11 WILD-TYPE
  CLUS_1              0               90
  CLUS_2              1              137
  CLUS_3              2              186
  CLUS_4              0               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(188) Variable = SH3KBP1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SH3KBP1 MUTATED        0      0      0      0
  SH3KBP1 WILD-TYPE     69     43     74     54
D188V1, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SH3KBP1 MUTATED        0      0      0      0
  SH3KBP1 WILD-TYPE     63     50     48     79
D188V2, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SH3KBP1 MUTATED        0      0      0      0
  SH3KBP1 WILD-TYPE     77     93     45     60
D188V3, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SH3KBP1 MUTATED        0      0      0
  SH3KBP1 WILD-TYPE    138     61     76
D188V4, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SH3KBP1 MUTATED        0      4      0
  SH3KBP1 WILD-TYPE    295    477      7
D188V5, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               0               295
  CLUS_2               4               477
  CLUS_3               0                 7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SH3KBP1 MUTATED        1      0      0      3
  SH3KBP1 WILD-TYPE    159    232     64    163
D188V6, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               1               159
  CLUS_2               0               232
  CLUS_3               0                64
  CLUS_4               3               163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SH3KBP1 MUTATED        1      1      2
  SH3KBP1 WILD-TYPE    226    234    190
D188V7, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               1               226
  CLUS_2               1               234
  CLUS_3               2               190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SH3KBP1 MUTATED        0      1      3
  SH3KBP1 WILD-TYPE    196    189    265
D188V8, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               0               196
  CLUS_2               1               189
  CLUS_3               3               265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SH3KBP1 MUTATED        0      1      2      1
  SH3KBP1 WILD-TYPE    136    106    181     82
D188V9, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               0               136
  CLUS_2               1               106
  CLUS_3               2               181
  CLUS_4               1                82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SH3KBP1 MUTATED        1      2      1
  SH3KBP1 WILD-TYPE    221    182    102
D188V10, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               1               221
  CLUS_2               2               182
  CLUS_3               1               102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SH3KBP1 MUTATED        0      2      2
  SH3KBP1 WILD-TYPE    184    160    157
D188V11, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               0               184
  CLUS_2               2               160
  CLUS_3               2               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SH3KBP1 MUTATED        0      1      3      0
  SH3KBP1 WILD-TYPE     90    137    185     89
D188V12, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               0                90
  CLUS_2               1               137
  CLUS_3               3               185
  CLUS_4               0                89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
