[1] "started"
[1] "R version 2.15.3 (2013-03-01)"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/15087381/analysis.results.RData"
[1] "CLI_CNVFOCAL"
[1] "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
                           V1.D                              V2 
                "Time to Death"                "YEARS_TO_BIRTH" 
                             V3                              V4 
        "NEOPLASM_DISEASESTAGE"             "PATHOLOGY_T_STAGE" 
                             V5                              V6 
            "PATHOLOGY_N_STAGE"             "PATHOLOGY_M_STAGE" 
                             V7                              V8 
                       "GENDER"   "KARNOFSKY_PERFORMANCE_SCORE" 
                             V9                             V10 
            "HISTOLOGICAL_TYPE"      "NUMBER_PACK_YEARS_SMOKED" 
                            V11                             V12 
"YEAR_OF_TOBACCO_SMOKING_ONSET"                          "RACE" 
                            V13 
                    "ETHNICITY" 
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[1] FALSE
[1] "symlink"
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[1] FALSE
[1] "symlink"
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[1] TRUE
[1] "symlink"
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[1] TRUE
[1] "symlink"
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[1] FALSE
[1] "symlink"
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[1] FALSE
[1] "symlink"
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[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/15087381/D37V1.png"
[1] TRUE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/15087381/D37V2.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/15087381/D37V3.png"
[1] TRUE
[1] "symlink"
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[1] TRUE
[1] "symlink"
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[1] TRUE
[1] "symlink"
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[1] TRUE
[1] "symlink"
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[1] FALSE
[1] "symlink"
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[1] FALSE
[1] "symlink"
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[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/15087381/D37V10.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/15087381/D37V11.png"
[1] TRUE
[1] "symlink"
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[1] TRUE
[1] "symlink"
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[1] TRUE
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[1] TRUE
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[1] FALSE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] FALSE
[1] "symlink"
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[1] TRUE
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[1] TRUE
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[1] FALSE
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[1] FALSE
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[1] FALSE
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[1] FALSE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] FALSE
[1] "symlink"
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[1] FALSE
[1] "symlink"
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[1] FALSE
[1] "symlink"
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[1] TRUE
[1] "symlink"
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[1] FALSE
[1] "symlink"
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[1] FALSE
[1] "symlink"
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[1] TRUE
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[1] FALSE
