		Clinical Features	Time to Death		YEARS_TO_BIRTH		NEOPLASM_DISEASESTAGE		PATHOLOGY_T_STAGE		PATHOLOGY_N_STAGE		PATHOLOGY_M_STAGE		GENDER		KARNOFSKY_PERFORMANCE_SCORE		NUMBER_PACK_YEARS_SMOKED		YEAR_OF_TOBACCO_SMOKING_ONSET		RACE		ETHNICITY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p gain	24 (5%)	500	0.0070597	0.0891	0.17921	0.678	0.15319	0.626	0.26737	0.778	0.21028	0.729	0.38498	0.905	1	1	0.49823	1	NA	NA	NA	NA	0.42647	0.942	1	1
1q gain	51 (10%)	473	0.077412	0.459	0.033499	0.263	0.052209	0.348	0.084839	0.486	0.42331	0.942	0.68153	1	0.54079	1	0.79564	1	NA	NA	NA	NA	0.69268	1	0.72923	1
2p gain	76 (15%)	448	0.70978	1	0.1423	0.596	0.13324	0.576	0.53093	1	1	1	0.23069	0.75	1	1	0.62765	1	NA	NA	NA	NA	0.28864	0.806	0.76005	1
2q gain	78 (15%)	446	0.70827	1	0.22899	0.749	0.32117	0.848	0.66633	1	0.74705	1	0.39249	0.91	0.44519	0.959	0.94341	1	NA	NA	NA	NA	0.25549	0.773	0.37153	0.898
3p gain	19 (4%)	505	0.026602	0.223	0.5325	1	0.14066	0.592	0.19707	0.709	0.045874	0.328	0.097766	0.503	0.33214	0.862	0.95999	1	NA	NA	NA	NA	0.78478	1	1	1
3q gain	60 (11%)	464	0.26523	0.778	0.8841	1	0.00066999	0.0186	4e-05	0.00243	0.0082903	0.0972	0.0073972	0.0911	0.77508	1	0.43663	0.954	NA	NA	NA	NA	0.32442	0.85	1	1
4p gain	13 (2%)	511	0.089504	0.488	0.75408	1	0.38418	0.905	0.17119	0.654	0.49538	1	1	1	0.39512	0.912	NA	NA	NA	NA	NA	NA	1	1	1	1
4q gain	13 (2%)	511	0.27712	0.792	0.75408	1	0.53514	1	0.7128	1	0.45483	0.962	0.70242	1	0.77859	1	NA	NA	NA	NA	NA	NA	1	1	1	1
5p gain	193 (37%)	331	0.086599	0.486	0.00016482	0.00697	0.11372	0.538	0.19555	0.709	0.62318	1	1	1	0.014052	0.142	0.84617	1	NA	NA	NA	NA	0.090889	0.488	0.83465	1
5q gain	206 (39%)	318	0.092958	0.488	0.00045572	0.014	0.34873	0.865	0.35343	0.874	1	1	1	1	0.019636	0.176	0.84617	1	NA	NA	NA	NA	0.03061	0.248	0.83632	1
6p gain	11 (2%)	513	0.70723	1	0.81186	1	0.31189	0.835	0.23211	0.751	1	1	0.68643	1	0.34237	0.862	NA	NA	NA	NA	NA	NA	1	1	1	1
6q gain	9 (2%)	515	0.50432	1	0.37152	0.898	0.22798	0.749	0.28357	0.797	1	1	1	1	0.16718	0.65	NA	NA	NA	NA	NA	NA	1	1	1	1
7p gain	171 (33%)	353	0.93607	1	0.26952	0.78	0.065729	0.407	0.11704	0.538	0.44908	0.959	0.025487	0.215	0.0034951	0.0537	0.48604	1	0.12274	0.55	NA	NA	0.050099	0.34	0.65543	1
7q gain	172 (33%)	352	0.58319	1	0.30556	0.825	0.01609	0.155	0.056909	0.362	0.44263	0.956	0.002551	0.0432	0.0087748	0.0996	0.24254	0.751	0.12274	0.55	NA	NA	0.04317	0.32	0.27052	0.78
8p gain	30 (6%)	494	0.55427	1	0.17015	0.654	0.00127	0.0274	0.00145	0.0286	1	1	0.19399	0.709	0.56051	1	0.53801	1	NA	NA	NA	NA	0.42586	0.942	0.38218	0.905
8q gain	61 (12%)	463	0.22855	0.749	0.047122	0.331	0.0053299	0.074	0.0080799	0.097	0.44777	0.959	0.085489	0.486	0.11782	0.538	0.95234	1	NA	NA	NA	NA	0.60986	1	0.49501	1
9p gain	13 (2%)	511	0.28092	0.792	0.69348	1	0.90122	1	0.050679	0.34	1	1	0.23701	0.751	0.01682	0.158	NA	NA	NA	NA	NA	NA	0.69853	1	0.55542	1
9q gain	12 (2%)	512	0.98721	1	0.34697	0.865	0.21178	0.73	0.00258	0.0432	1	1	1	1	0.12862	0.566	NA	NA	NA	NA	NA	NA	1	1	0.55542	1
10p gain	17 (3%)	507	0.75394	1	0.099582	0.504	0.3417	0.862	0.1061	0.521	0.10593	0.521	0.73901	1	0.79783	1	0.28117	0.792	NA	NA	NA	NA	0.41985	0.942	1	1
10q gain	12 (2%)	512	0.6497	1	0.015923	0.155	0.82515	1	0.88213	1	0.25976	0.774	1	1	0.36429	0.892	0.66979	1	NA	NA	NA	NA	0.68308	1	1	1
11p gain	31 (6%)	493	0.96879	1	0.97849	1	0.02915	0.238	0.01323	0.137	1	1	0.11563	0.538	0.705	1	0.89501	1	NA	NA	NA	NA	0.85382	1	1	1
11q gain	29 (6%)	495	0.51004	1	0.91288	1	0.16678	0.65	0.086989	0.486	1	1	0.42041	0.942	1	1	NA	NA	NA	NA	NA	NA	0.84545	1	1	1
12p gain	119 (23%)	405	0.003742	0.056	0.16354	0.65	0.00027	0.0101	0.00135	0.0277	0.087916	0.486	0.019331	0.176	0.44823	0.959	0.034337	0.265	NA	NA	NA	NA	0.04493	0.328	0.22453	0.749
12q gain	120 (23%)	404	0.0060906	0.08	0.30245	0.823	0.00028	0.0101	0.00085999	0.0209	0.087916	0.486	0.019907	0.176	0.44812	0.959	0.034337	0.265	NA	NA	NA	NA	0.03482	0.266	0.22441	0.749
13q gain	22 (4%)	502	0.18448	0.687	0.24166	0.751	0.12775	0.566	0.2083	0.729	1	1	0.367	0.892	0.25685	0.773	NA	NA	NA	NA	NA	NA	0.092849	0.488	0.092884	0.488
14q gain	16 (3%)	508	0.13633	0.581	0.45703	0.964	0.20851	0.729	0.0065199	0.0834	1	1	0.29538	0.811	0.79615	1	NA	NA	NA	NA	NA	NA	1	1	1	1
15q gain	26 (5%)	498	0.28938	0.806	0.47125	0.987	0.55932	1	0.38926	0.907	0.21028	0.729	0.58245	1	0.6777	1	0.03511	0.267	NA	NA	NA	NA	0.67146	1	1	1
16p gain	106 (20%)	418	0.35458	0.875	0.2661	0.778	0.18157	0.681	0.094649	0.492	0.13389	0.576	0.6482	1	0.7339	1	0.831	1	0.16686	0.65	NA	NA	0.19779	0.709	1	1
16q gain	98 (19%)	426	0.21915	0.745	0.36099	0.888	0.19661	0.709	0.064209	0.4	0.21076	0.729	1	1	1	1	0.95579	1	0.16686	0.65	NA	NA	0.32644	0.853	0.78613	1
17p gain	25 (5%)	499	0.95966	1	0.41408	0.936	0.084749	0.486	0.83287	1	0.21028	0.729	0.021348	0.187	0.83156	1	0.18369	0.687	NA	NA	NA	NA	0.052799	0.349	0.61099	1
17q gain	32 (6%)	492	0.6794	1	0.24951	0.767	0.53109	1	0.7057	1	0.32283	0.848	0.20173	0.718	0.85076	1	0.51903	1	NA	NA	NA	NA	0.075549	0.453	0.62638	1
18p gain	25 (5%)	499	0.049672	0.34	0.83027	1	0.67433	1	0.87268	1	1	1	0.40054	0.92	0.09137	0.488	NA	NA	NA	NA	NA	NA	0.66434	1	0.33771	0.862
18q gain	25 (5%)	499	0.11907	0.538	0.64119	1	0.52455	1	0.76762	1	0.60062	1	0.40054	0.92	0.09137	0.488	NA	NA	NA	NA	NA	NA	0.66334	1	0.33771	0.862
19p gain	51 (10%)	473	0.92	1	0.71227	1	0.0053299	0.074	0.01391	0.142	0.40263	0.921	0.0078085	0.0949	0.21996	0.745	0.42651	0.942	NA	NA	NA	NA	0.085329	0.486	0.72923	1
19q gain	57 (11%)	467	0.49845	1	0.42011	0.942	0.00147	0.0286	0.00496	0.0709	0.43513	0.954	0.0035373	0.0537	0.24182	0.751	0.42651	0.942	NA	NA	NA	NA	0.04936	0.34	1	1
20p gain	111 (21%)	413	0.15301	0.626	0.25753	0.773	3e-05	0.00194	9.9999e-06	0.00162	0.54836	1	0.016733	0.158	0.00034895	0.012	0.68374	1	NA	NA	NA	NA	0.28079	0.792	0.4413	0.956
20q gain	114 (22%)	410	0.11423	0.538	0.089446	0.488	2e-05	0.00162	2e-05	0.00162	0.24134	0.751	0.018794	0.174	0.0019901	0.0361	0.68374	1	NA	NA	NA	NA	0.28775	0.806	0.31901	0.847
21q gain	50 (10%)	474	0.64153	1	0.1267	0.565	0.24277	0.751	0.11365	0.538	1	1	0.53333	1	0.43892	0.956	0.87637	1	NA	NA	NA	NA	0.31935	0.847	0.72043	1
22q gain	40 (8%)	484	0.52407	1	0.58906	1	0.72076	1	0.087609	0.486	1	1	0.82026	1	0.30462	0.825	0.34048	0.862	NA	NA	NA	NA	0.23343	0.751	1	1
xp gain	31 (6%)	493	0.47135	0.987	0.55423	1	0.04579	0.328	0.12818	0.566	1	1	0.036873	0.278	0.8472	1	0.95999	1	NA	NA	NA	NA	0.04508	0.328	0.62638	1
xq gain	30 (6%)	494	0.83034	1	0.77751	1	0.093829	0.49	0.16582	0.65	1	1	0.027381	0.227	0.6959	1	0.95999	1	NA	NA	NA	NA	0.4416	0.956	0.62638	1
1p loss	56 (11%)	468	0.3351	0.862	0.10051	0.504	0.57811	1	0.01582	0.155	0.70222	1	0.43075	0.949	0.24238	0.751	0.76886	1	NA	NA	NA	NA	0.52943	1	0.20521	0.726
1q loss	36 (7%)	488	0.65396	1	0.68484	1	0.83075	1	0.076039	0.453	1	1	0.33841	0.862	0.59037	1	0.89501	1	NA	NA	NA	NA	0.41694	0.94	0.45516	0.962
2p loss	14 (3%)	510	0.96587	1	0.81497	1	0.45252	0.962	0.13911	0.59	1	1	0.70745	1	0.77893	1	NA	NA	NA	NA	NA	NA	0.050399	0.34	1	1
2q loss	14 (3%)	510	0.98031	1	0.79139	1	0.55737	1	0.22271	0.749	1	1	0.70745	1	0.77893	1	NA	NA	NA	NA	NA	NA	0.16854	0.65	1	1
3p loss	378 (72%)	146	0.58818	1	0.73382	1	0.02443	0.208	0.03152	0.253	0.7913	1	0.10009	0.504	0.011275	0.12	0.37875	0.905	0.38743	0.905	NA	NA	0.2617	0.778	0.65464	1
3q loss	98 (19%)	426	0.99232	1	0.010744	0.116	0.47308	0.987	0.23698	0.751	0.74705	1	0.87605	1	0.00011033	0.00591	0.3474	0.865	NA	NA	NA	NA	0.61439	1	0.78286	1
4p loss	72 (14%)	452	2.1881e-05	0.00164	0.78457	1	0.00028	0.0101	0.00013	0.00602	0.73001	1	0.021626	0.188	0.8951	1	0.55141	1	NA	NA	NA	NA	0.060779	0.381	0.56108	1
4q loss	65 (12%)	459	1.4828e-06	0.00144	0.87055	1	9.9999e-06	0.00162	9.9999e-06	0.00162	0.46112	0.97	0.0029309	0.0467	0.26989	0.78	0.43663	0.954	NA	NA	NA	NA	0.02824	0.233	0.75786	1
5p loss	7 (1%)	517	0.015926	0.155	0.24711	0.763	0.00137	0.0277	0.00012	0.00591	1	1	0.081587	0.477	0.25675	0.773	NA	NA	NA	NA	NA	NA	1	1	1	1
5q loss	6 (1%)	518	0.046679	0.331	0.14742	0.615	0.0056399	0.0761	0.00039	0.0126	1	1	0.24016	0.751	0.67179	1	NA	NA	NA	NA	NA	NA	1	1	1	1
6p loss	100 (19%)	424	0.41335	0.936	0.30111	0.823	0.054749	0.357	0.01981	0.176	0.0054963	0.0752	0.27926	0.792	0.0011479	0.0266	0.045454	0.328	0.71602	1	0.88079	1	0.060199	0.38	1	1
6q loss	128 (24%)	396	0.47915	0.995	0.7271	1	0.34788	0.865	0.1983	0.709	0.0012961	0.0274	0.66875	1	0.071289	0.433	0.52811	1	0.055646	0.361	0.88079	1	0.13031	0.571	0.47913	0.995
7q loss	3 (1%)	521	0.50518	1	0.60486	1	0.11781	0.538	0.01055	0.115	0.072	0.435	1	1	0.55623	1	NA	NA	NA	NA	NA	NA	1	1	0.13543	0.58
8p loss	137 (26%)	387	0.26457	0.778	0.73881	1	0.33907	0.862	0.19785	0.709	0.7747	1	0.26684	0.778	0.038345	0.287	0.698	1	0.84349	1	0.65278	1	0.21683	0.74	0.057043	0.362
8q loss	64 (12%)	460	0.52605	1	0.76361	1	0.56112	1	0.25428	0.772	0.43513	0.954	1	1	0.012353	0.129	0.38741	0.905	NA	NA	NA	NA	0.29206	0.809	0.053375	0.351
9p loss	149 (28%)	375	1.9679e-05	0.00162	0.070623	0.432	2e-05	0.00162	2e-05	0.00162	0.10176	0.507	0.0016012	0.0305	0.00085422	0.0209	0.52292	1	0.80495	1	0.76423	1	0.24122	0.751	0.65464	1
9q loss	150 (29%)	374	0.00035768	0.012	0.050479	0.34	9.9999e-06	0.00162	2e-05	0.00162	0.17156	0.654	0.0041083	0.0605	0.00084585	0.0209	0.30672	0.826	0.84349	1	0.76423	1	0.22208	0.749	0.82426	1
10p loss	67 (13%)	457	0.25229	0.772	0.38698	0.905	0.082039	0.477	0.01021	0.113	0.14076	0.592	0.58284	1	0.33971	0.862	0.16778	0.65	NA	NA	NA	NA	0.68587	1	0.2148	0.738
10q loss	89 (17%)	435	0.34171	0.862	0.58118	1	0.10851	0.525	0.00282	0.0457	0.32248	0.848	0.62659	1	0.1145	0.538	0.51113	1	NA	NA	NA	NA	0.31622	0.844	0.4036	0.921
11p loss	18 (3%)	506	0.008402	0.0972	0.056737	0.362	0.36674	0.892	0.41404	0.936	0.15618	0.633	0.50451	1	1	1	0.66979	1	NA	NA	NA	NA	1	1	0.61166	1
11q loss	23 (4%)	501	0.0074079	0.0911	0.0063995	0.0829	0.61956	1	0.51434	1	0.23816	0.751	0.38498	0.905	0.37935	0.905	0.28117	0.792	NA	NA	NA	NA	0.79633	1	1	1
12p loss	3 (1%)	521	0.32768	0.854	0.82259	1	0.47238	0.987	0.73822	1	1	1	1	1	1	1	NA	NA	NA	NA	NA	NA	1	1	1	1
12q loss	4 (1%)	520	0.97823	1	0.3197	0.847	0.162	0.648	0.41112	0.936	1	1	1	1	1	1	NA	NA	NA	NA	NA	NA	1	1	1	1
13q loss	71 (14%)	453	0.0012817	0.0274	0.97202	1	0.00016	0.00697	9.9999e-06	0.00162	0.49092	1	0.033316	0.263	0.4249	0.942	1	1	NA	NA	NA	NA	0.27925	0.792	0.22853	0.749
14q loss	214 (41%)	310	0.0007965	0.0209	0.25417	0.772	3e-05	0.00194	8.9999e-05	0.00515	0.0022714	0.0394	0.0011057	0.0262	0.033081	0.263	0.24209	0.751	0.21694	0.74	0.23024	0.75	0.01191	0.126	0.68608	1
15q loss	36 (7%)	488	0.00085271	0.0209	0.99909	1	0.00122	0.0274	0.00046	0.014	1	1	0.014226	0.143	0.1039	0.515	0.53684	1	NA	NA	NA	NA	0.22733	0.749	0.38548	0.905
16p loss	10 (2%)	514	0.11829	0.538	0.66405	1	0.38021	0.905	0.01688	0.158	0.36433	0.892	1	1	1	1	NA	NA	NA	NA	NA	NA	0.3764	0.905	1	1
16q loss	16 (3%)	508	0.13396	0.576	0.34702	0.865	0.39496	0.912	0.0057499	0.0766	0.45483	0.962	1	1	0.79615	1	NA	NA	NA	NA	NA	NA	0.15328	0.626	1	1
17p loss	45 (9%)	479	0.44081	0.956	0.30296	0.823	0.2055	0.726	0.17964	0.678	0.37464	0.904	0.047395	0.331	0.19668	0.709	0.30219	0.823	NA	NA	NA	NA	1	1	0.71116	1
17q loss	28 (5%)	496	0.49183	1	0.81297	1	0.29016	0.806	0.26528	0.778	1	1	0.17989	0.678	0.31093	0.835	NA	NA	NA	NA	NA	NA	1	1	1	1
18p loss	93 (18%)	431	0.0020073	0.0361	0.10745	0.525	0.00049	0.0144	0.00019	0.00769	1	1	0.079678	0.469	0.23353	0.751	0.8683	1	NA	NA	NA	NA	0.34539	0.865	0.098647	0.504
18q loss	95 (18%)	429	0.0083078	0.0972	0.13111	0.571	0.0088099	0.0996	0.00454	0.0659	1	1	0.11279	0.538	0.15802	0.637	0.80877	1	NA	NA	NA	NA	0.33636	0.862	0.28128	0.792
19p loss	11 (2%)	513	0.0001217	0.00591	0.097704	0.503	0.02348	0.202	0.00056999	0.0163	1	1	0.39125	0.91	0.75368	1	NA	NA	NA	NA	NA	NA	0.1175	0.538	1	1
19q loss	4 (1%)	520	0.0031865	0.05	0.85892	1	0.19511	0.709	0.00279	0.0457	1	1	0.11838	0.538	1	1	NA	NA	NA	NA	NA	NA	1	1	1	1
20p loss	8 (2%)	516	0.80141	1	0.68673	1	0.72422	1	0.61245	1	1	1	0.36609	0.892	1	1	NA	NA	NA	NA	NA	NA	0.15454	0.628	0.25312	0.772
20q loss	3 (1%)	521	0.81797	1	0.113	0.538	0.22694	0.749	0.10826	0.525	NA	NA	0.40215	0.921	1	1	NA	NA	NA	NA	NA	NA	1	1	0.070081	0.431
21q loss	54 (10%)	470	0.60318	1	0.73703	1	0.16178	0.648	0.00195	0.0361	0.090537	0.488	1	1	0.55017	1	1	1	NA	NA	NA	NA	0.45378	0.962	1	1
22q loss	39 (7%)	485	0.0021032	0.0372	0.2592	0.774	0.01971	0.176	0.16416	0.65	1	1	0.10007	0.504	0.86257	1	0.34048	0.862	NA	NA	NA	NA	1	1	0.010239	0.113
xp loss	46 (9%)	478	0.38193	0.905	0.93647	1	0.87779	1	0.55676	1	0.26632	0.778	0.82587	1	0.1973	0.709	0.54716	1	NA	NA	NA	NA	0.57707	1	0.14901	0.618
xq loss	46 (9%)	478	0.29336	0.81	0.64413	1	0.87642	1	0.55865	1	0.2946	0.811	1	1	0.1973	0.709	0.54716	1	NA	NA	NA	NA	0.64458	1	0.14935	0.618
