		Clinical Features	CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
amp_2p23.2	45 (16%)	243	9.9999e-06	5.08e-05	0.0082799	0.0166	0.88368	0.915	0.02574	0.0461	0.098909	0.145	0.9517	0.974	0.15191	0.212	0.061309	0.0955	0.43859	0.515	0.078369	0.118
amp_2q32.1	53 (18%)	235	9.9999e-06	5.08e-05	0.03073	0.0532	0.74671	0.809	0.051739	0.0827	0.35012	0.429	0.93791	0.963	0.30246	0.383	0.12781	0.182	0.97552	0.988	0.51159	0.594
amp_3q27.1	100 (35%)	188	9.9999e-06	5.08e-05	0.03405	0.058	0.23222	0.309	0.0066199	0.0141	9.9999e-06	5.08e-05	0.01793	0.0335	0.03263	0.0559	0.00019	0.000669	0.75796	0.81	0.01674	0.0315
amp_5q35.2	37 (13%)	251	9.9999e-06	5.08e-05	0.00029	0.000988	0.24068	0.316	0.094799	0.141	0.0027	0.0067	9.9999e-06	5.08e-05	0.050879	0.0817	0.00476	0.0108	0.40857	0.487	0.055119	0.0867
amp_7q31.2	177 (61%)	111	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.02271	0.0419	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.052549	0.0835	9.9999e-06	5.08e-05	3e-05	0.000131	2e-05	9.12e-05
amp_17q25.2	201 (70%)	87	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.074699	0.114	6.9999e-05	0.000289	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.070859	0.108	0.00084999	0.00258	0.00139	0.00394	0.00103	0.00304
amp_19p13.2	31 (11%)	257	9.9999e-06	5.08e-05	0.0047	0.0108	0.0065499	0.014	0.0099499	0.0194	3e-04	0.00101	0.0014	0.00394	0.12218	0.175	0.56276	0.639	0.060769	0.0951	0.0079199	0.0162
del_1p36.31	55 (19%)	233	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.75437	0.81	0.0253	0.0458	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.77404	0.825	0.8552	0.89	0.02463	0.0449	0.0051099	0.0114
del_2p12	8 (3%)	280	0.084219	0.126	0.0082599	0.0166	0.13189	0.186	0.29156	0.37	0.0032	0.00769	0.10994	0.16	0.17639	0.244	0.28201	0.36	0.6929	0.762	1	1
del_2q22.1	10 (3%)	278	0.00358	0.00847	0.0058099	0.0127	0.48446	0.567	0.37545	0.455	5e-05	0.000212	0.0071899	0.0151	0.66804	0.745	0.81088	0.855	0.17891	0.246	0.42551	0.502
del_2q37.3	12 (4%)	276	0.097749	0.144	0.00248	0.0063	0.0095299	0.0187	0.11041	0.16	0.0158	0.0299	0.0025	0.0063	0.14237	0.2	0.15375	0.214	0.04518	0.0737	0.23187	0.309
del_3p22.1	25 (9%)	263	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.75813	0.81	0.00077999	0.00239	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.20571	0.28	0.0052899	0.0117	0.02539	0.0458	0.00415	0.00967
del_4q34.3	32 (11%)	256	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.85014	0.89	0.00061999	0.002	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.42284	0.5	0.36534	0.444	0.0088899	0.0177	2e-05	9.12e-05
del_5p15.33	13 (5%)	275	0.256	0.335	0.00242	0.0062	0.78887	0.838	0.02984	0.0523	0.03249	0.0559	0.00074999	0.00232	0.55966	0.638	0.20423	0.279	0.33445	0.415	0.00141	0.00394
del_5q35.2	11 (4%)	277	0.02779	0.0495	0.00019	0.000669	0.726	0.792	0.00361	0.00848	0.00043	0.00143	9.9999e-06	5.08e-05	0.0073299	0.0152	0.00305	0.00744	0.00157	0.00435	9.9999e-06	5.08e-05
del_6p12.3	26 (9%)	262	9.9999e-06	5.08e-05	0.00062999	0.00201	1	1	0.37809	0.456	0.0012	0.00348	0.00087999	0.00265	0.13148	0.186	0.50571	0.589	0.2615	0.341	0.21743	0.294
del_6q22.31	29 (10%)	259	9.9999e-06	5.08e-05	0.00060999	0.00199	0.95903	0.978	0.01114	0.0214	0.00019	0.000669	9.9999e-06	5.08e-05	0.41316	0.491	0.26542	0.343	0.01444	0.0275	0.03851	0.0638
del_6q25.3	32 (11%)	256	9.9999e-06	5.08e-05	2e-05	9.12e-05	0.82448	0.866	0.03055	0.0532	3e-05	0.000131	9.9999e-06	5.08e-05	0.34408	0.425	0.74231	0.807	0.04282	0.0702	0.064219	0.099
del_9p21.3	40 (14%)	248	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.68816	0.759	9.9999e-05	0.000392	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.00056999	0.00188	0.02929	0.0516	6.9999e-05	0.000289	2e-05	9.12e-05
del_10q21.1	19 (7%)	269	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.35302	0.431	0.00169	0.0046	9.9999e-05	0.000392	0.00069999	0.00219	0.63391	0.709	0.97368	0.988	0.03589	0.0608	0.0061599	0.0133
del_11q22.3	31 (11%)	257	9.9999e-06	5.08e-05	0.00011	0.000426	0.88976	0.916	0.10615	0.155	3e-05	0.000131	0.00235	0.00607	0.23778	0.314	0.19246	0.264	0.0026	0.0065	0.00235	0.00607
del_11q23.3	29 (10%)	259	9.9999e-06	5.08e-05	8.9999e-05	0.000362	0.68816	0.759	0.063369	0.0982	0.00013	0.000491	0.00136	0.0039	0.3229	0.404	0.33344	0.415	0.0061599	0.0133	0.0051199	0.0114
del_14q11.2	51 (18%)	237	9.9999e-06	5.08e-05	0.00193	0.00516	0.11449	0.165	0.0078499	0.0161	2e-05	9.12e-05	9.9999e-06	5.08e-05	0.52204	0.604	0.55801	0.638	0.02324	0.0426	0.02825	0.05
del_14q24.2	50 (17%)	238	9.9999e-06	5.08e-05	0.00016	0.00059	0.069729	0.107	0.00112	0.00328	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.54114	0.621	0.57108	0.646	0.0069699	0.0147	0.0081899	0.0166
del_15q13.3	35 (12%)	253	9.9999e-06	5.08e-05	0.00027	0.00094	0.11672	0.168	0.00233	0.00607	2e-05	9.12e-05	9.9999e-06	5.08e-05	0.075999	0.115	0.5984	0.672	0.04061	0.067	0.00318	0.00769
del_16q24.1	12 (4%)	276	0.00018	0.000656	0.00012	0.000459	0.28075	0.36	0.26672	0.343	0.0029	0.00713	0.00206	0.00546	1	1	0.055119	0.0867	0.0104	0.0201	0.050049	0.0808
del_19p13.3	23 (8%)	265	2e-05	9.12e-05	0.0121	0.0232	0.68203	0.758	0.22501	0.303	0.0092199	0.0182	0.00421	0.00974	0.2376	0.314	0.30885	0.388	0.086589	0.129	0.03693	0.0622
del_19q13.42	19 (7%)	269	5e-05	0.000212	0.02182	0.0405	0.88592	0.915	0.03716	0.0623	0.00177	0.00477	0.0034	0.00811	0.39785	0.478	0.30412	0.383	0.22895	0.307	0.34759	0.428
del_22q12.2	63 (22%)	225	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.53455	0.616	0.00101	0.00301	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	1	1	0.40302	0.482	0.03761	0.0627	0.00487	0.011
del_xp11.4	34 (12%)	254	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.59779	0.672	0.00064999	0.00206	9.9999e-06	5.08e-05	9.9999e-06	5.08e-05	0.70217	0.769	0.26486	0.343	0.00159	0.00436	0.00029	0.000988
del_xq28	28 (10%)	260	9.9999e-06	5.08e-05	8.9999e-05	0.000362	0.85592	0.89	0.04613	0.0749	9.9999e-06	5.08e-05	0.00016	0.00059	0.74918	0.809	0.79382	0.84	0.0073599	0.0152	0.0053799	0.0118
