
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/KIRP-TP/14528917/KIRP-TP.meth.by_max_stddev.data.txt", "-u7432", "-oKIRP-TP")
Cluster size 7432 broken into 4153 3279 
Cluster size 4153 broken into 1656 2497 
Cluster size 1656 broken into 909 747 
Done cluster 909 
Done cluster 747 
Done cluster 1656 
Cluster size 2497 broken into 1535 962 
Cluster size 1535 broken into 1126 409 
Done cluster 1126 
Done cluster 409 
Done cluster 1535 
Done cluster 962 
Done cluster 2497 
Done cluster 4153 
Cluster size 3279 broken into 1559 1720 
Cluster size 1559 broken into 676 883 
Done cluster 676 
Done cluster 883 
Done cluster 1559 
Cluster size 1720 broken into 195 1525 
Done cluster 195 
Cluster size 1525 broken into 982 543 
Done cluster 982 
Done cluster 543 
Done cluster 1525 
Done cluster 1720 
Done cluster 3279 
> q(save="no")
