[1] "R version 2.15.3 (2013-03-01)"
[1] "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "opt:  MRNA_EXPR"
[1] "vtyp==survival in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==multiclass in table1 generation"
                              Clinical feature               
DAYS_TO_DEATH_OR_LAST_FUP     "DAYS_TO_DEATH_OR_LAST_FUP"    
YEARS_TO_BIRTH                "YEARS_TO_BIRTH"               
NEOPLASM_DISEASESTAGE         "NEOPLASM_DISEASESTAGE"        
PATHOLOGY_T_STAGE             "PATHOLOGY_T_STAGE"            
PATHOLOGY_N_STAGE             "PATHOLOGY_N_STAGE"            
GENDER                        "GENDER"                       
KARNOFSKY_PERFORMANCE_SCORE   "KARNOFSKY_PERFORMANCE_SCORE"  
NUMBER_PACK_YEARS_SMOKED      "NUMBER_PACK_YEARS_SMOKED"     
YEAR_OF_TOBACCO_SMOKING_ONSET "YEAR_OF_TOBACCO_SMOKING_ONSET"
COMPLETENESS_OF_RESECTION     "COMPLETENESS_OF_RESECTION"    
RACE                          "RACE"                         
                              Statistical test            Significant genes
DAYS_TO_DEATH_OR_LAST_FUP     "Cox regression test"       "N=0"            
YEARS_TO_BIRTH                "Spearman correlation test" "N=1"            
NEOPLASM_DISEASESTAGE         "Kruskal-Wallis test"       "N=0"            
PATHOLOGY_T_STAGE             "Spearman correlation test" "N=1"            
PATHOLOGY_N_STAGE             "Spearman correlation test" "N=0"            
GENDER                        "Wilcoxon test"             "N=0"            
KARNOFSKY_PERFORMANCE_SCORE   "Spearman correlation test" "N=0"            
NUMBER_PACK_YEARS_SMOKED      "Spearman correlation test" "N=0"            
YEAR_OF_TOBACCO_SMOKING_ONSET "Spearman correlation test" "N=0"            
COMPLETENESS_OF_RESECTION     "Kruskal-Wallis test"       "N=0"            
RACE                          "Kruskal-Wallis test"       "N=0"            
                              Associated with
DAYS_TO_DEATH_OR_LAST_FUP     " "            
YEARS_TO_BIRTH                "older"        
NEOPLASM_DISEASESTAGE         " "            
PATHOLOGY_T_STAGE             "higher stage" 
PATHOLOGY_N_STAGE             " "            
GENDER                        " "            
KARNOFSKY_PERFORMANCE_SCORE   " "            
NUMBER_PACK_YEARS_SMOKED      " "            
YEAR_OF_TOBACCO_SMOKING_ONSET " "            
COMPLETENESS_OF_RESECTION     " "            
RACE                          " "            
                              &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
DAYS_TO_DEATH_OR_LAST_FUP     " "                                                                                       
YEARS_TO_BIRTH                "N=0"                                                                                     
NEOPLASM_DISEASESTAGE         " "                                                                                       
PATHOLOGY_T_STAGE             "N=0"                                                                                     
PATHOLOGY_N_STAGE             " "                                                                                       
GENDER                        " "                                                                                       
KARNOFSKY_PERFORMANCE_SCORE   " "                                                                                       
NUMBER_PACK_YEARS_SMOKED      " "                                                                                       
YEAR_OF_TOBACCO_SMOKING_ONSET " "                                                                                       
COMPLETENESS_OF_RESECTION     " "                                                                                       
RACE                          " "                                                                                       
                              Associated with      
DAYS_TO_DEATH_OR_LAST_FUP     " "             " "  
YEARS_TO_BIRTH                "younger"       "N=1"
NEOPLASM_DISEASESTAGE         " "             " "  
PATHOLOGY_T_STAGE             "lower stage"   "N=1"
PATHOLOGY_N_STAGE             " "             " "  
GENDER                        " "             " "  
KARNOFSKY_PERFORMANCE_SCORE   " "             " "  
NUMBER_PACK_YEARS_SMOKED      " "             " "  
YEAR_OF_TOBACCO_SMOKING_ONSET " "             " "  
COMPLETENESS_OF_RESECTION     " "             " "  
RACE                          " "             " "  
[1] "vtyp==survival in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==multiclass in basici table generation"
