[1] "R version 2.15.3 (2013-03-01)"
[1] "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "opt:  MRNASEQ_EXPR"
[1] "vtyp==survival in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
                            Clinical feature             
DAYS_TO_DEATH_OR_LAST_FUP   "DAYS_TO_DEATH_OR_LAST_FUP"  
YEARS_TO_BIRTH              "YEARS_TO_BIRTH"             
NEOPLASM_DISEASESTAGE       "NEOPLASM_DISEASESTAGE"      
PATHOLOGY_T_STAGE           "PATHOLOGY_T_STAGE"          
PATHOLOGY_N_STAGE           "PATHOLOGY_N_STAGE"          
PATHOLOGY_M_STAGE           "PATHOLOGY_M_STAGE"          
GENDER                      "GENDER"                     
KARNOFSKY_PERFORMANCE_SCORE "KARNOFSKY_PERFORMANCE_SCORE"
                            Statistical test            Significant genes
DAYS_TO_DEATH_OR_LAST_FUP   "Cox regression test"       "N=30"           
YEARS_TO_BIRTH              "Spearman correlation test" "N=0"            
NEOPLASM_DISEASESTAGE       "Kruskal-Wallis test"       "N=0"            
PATHOLOGY_T_STAGE           "Spearman correlation test" "N=0"            
PATHOLOGY_N_STAGE           "Spearman correlation test" "N=30"           
PATHOLOGY_M_STAGE           "Wilcoxon test"             "N=0"            
GENDER                      "Wilcoxon test"             "N=13"           
KARNOFSKY_PERFORMANCE_SCORE "Spearman correlation test" "N=30"           
                            Associated with   
DAYS_TO_DEATH_OR_LAST_FUP   "shorter survival"
YEARS_TO_BIRTH              " "               
NEOPLASM_DISEASESTAGE       " "               
PATHOLOGY_T_STAGE           " "               
PATHOLOGY_N_STAGE           "higher stage"    
PATHOLOGY_M_STAGE           " "               
GENDER                      "male"            
KARNOFSKY_PERFORMANCE_SCORE "higher score"    
                            &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
DAYS_TO_DEATH_OR_LAST_FUP   "N=22"                                                                                    
YEARS_TO_BIRTH              " "                                                                                       
NEOPLASM_DISEASESTAGE       " "                                                                                       
PATHOLOGY_T_STAGE           " "                                                                                       
PATHOLOGY_N_STAGE           "N=28"                                                                                    
PATHOLOGY_M_STAGE           " "                                                                                       
GENDER                      "N=13"                                                                                    
KARNOFSKY_PERFORMANCE_SCORE "N=19"                                                                                    
                            Associated with         
DAYS_TO_DEATH_OR_LAST_FUP   "longer survival" "N=8" 
YEARS_TO_BIRTH              " "               " "   
NEOPLASM_DISEASESTAGE       " "               " "   
PATHOLOGY_T_STAGE           " "               " "   
PATHOLOGY_N_STAGE           "lower stage"     "N=2" 
PATHOLOGY_M_STAGE           " "               " "   
GENDER                      "female"          "N=0" 
KARNOFSKY_PERFORMANCE_SCORE "lower score"     "N=11"
[1] "vtyp==survival in basici table generation"
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==continuous in basici table generation"
