
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_mergedClustering/broadinstitute.org/cancer.genome.analysis/10572/2/merger_clustering.R")
> result <- main("-w/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/OV-TP/15085764/GDAC_CNMFselectcluster_15087598/OV-TP.bestclus.txt", "-y/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_pipelineConsensusClusteringPlus/OV-TP/15085761/GDAC_selectBestcluster_15087600/OV-TP.bestclus.txt", "-c/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/OV-TP/15085748/GDAC_CNMFselectcluster_15107845/OV-TP.bestclus.txt", "-d/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_pipelineConsensusClusteringPlus/OV-TP/15085757/GDAC_selectBestcluster_15092458/OV-TP.bestclus.txt", "-e/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/OV-TP/15085758/GDAC_CNMFselectcluster_15106234/OV-TP.bestclus.txt", "-f/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_pipelineConsensusClusteringPlus/OV-TP/15085747/GDAC_selectBestcluster_15092461/OV-TP.bestclus.txt", "-g/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/OV-TP/15098821/GDAC_CNMFselectcluster_15117666/OV-TP.bestclus.txt", "-a/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/OV-TP/15085746/GDAC_CNMFselectcluster_15114215/OV-TP.bestclus.txt", "-iOV-TP", "-b/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/OV-TP/15085756/GDAC_CNMFselectcluster_15093624/OV-TP.bestclus.txt", "-j/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_pipelineConsensusClusteringPlus/OV-TP/15085755/GDAC_selectBestcluster_15087601/OV-TP.bestclus.txt", "-l/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/OV-TP/15085752/GDAC_CNMFselectcluster_15092705/OV-TP.bestclus.txt", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_pipelineConsensusClusteringPlus/OV-TP/15085751/GDAC_selectBestcluster_15087603/OV-TP.bestclus.txt", "-n/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/OV-TP/15085760/GDAC_CNMFselectcluster_15096397/OV-TP.bestclus.txt", "-p/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_pipelineConsensusClusteringPlus/OV-TP/15085750/GDAC_selectBestcluster_15089829/OV-TP.bestclus.txt")
[1] "**** cluster demension ***"
[1] "dim(together):"
[1] 596  15
> q(save="no")
