name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-B7-5816-01A-21D-1600-08	1533	1533	0	1180	0	coding only	1	28834635	...	352	1029	1532	1.220754e-05	3.568625e-05	5.313055e-05	-4.274656e+00	...	149	28778450	...	5.177485e-06
TCGA-B7-5818-01A-11D-1600-08	464	464	0	351	0	coding only	1	28834635	...	112	335	463	3.884218e-06	1.161797e-05	1.605708e-05	-4.794333e+00	...	16	28778450	...	5.559716e-07
TCGA-BR-4183-01A-02D-1126-08	70	69	1	51	1.428571e-02	coding only	1	28834635	...	18	48	70	6.242493e-07	1.664665e-06	2.427636e-06	-5.614816e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-4184-01A-01D-1126-08	4616	4613	3	3375	6.499133e-04	coding only	1	28834635	...	1238	3064	4613	4.293448e-05	1.062611e-04	1.599812e-04	-3.795931e+00	...	308	28778450	...	1.070245e-05
TCGA-BR-4187-01A-01D-1126-08	37	36	1	26	2.702703e-02	coding only	1	28834635	...	10	25	37	3.468052e-07	8.670129e-07	1.283179e-06	-5.891713e+00	...	1	28778450	...	3.474822e-08
TCGA-BR-4188-01A-01D-1126-08	85	85	0	65	0	coding only	1	28834635	...	20	62	84	6.936103e-07	2.150192e-06	2.913163e-06	-5.535635e+00	...	2	28778450	...	6.949645e-08
TCGA-BR-4191-01A-02D-1126-08	223	222	1	176	4.484305e-03	coding only	1	28834635	...	46	160	223	1.595304e-06	5.548882e-06	7.733755e-06	-5.111610e+00	...	16	28778450	...	5.559716e-07
TCGA-BR-4201-01A-01D-1126-08	1648	1647	1	1238	6.067961e-04	coding only	1	28834635	...	409	941	1648	1.418433e-05	3.263436e-05	5.715349e-05	-4.242957e+00	...	297	28778450	...	1.032022e-05
TCGA-BR-4253-01A-01D-1126-08	99	99	0	75	0	coding only	1	28834635	...	24	71	99	8.323324e-07	2.462317e-06	3.433371e-06	-5.464279e+00	...	4	28778450	...	1.389929e-07
TCGA-BR-4255-01A-01D-1126-08	70	70	0	46	0	coding only	1	28834635	...	24	43	70	8.323324e-07	1.491262e-06	2.427636e-06	-5.614816e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-4256-01A-01D-1126-08	1170	1168	2	859	1.709402e-03	coding only	1	28834635	...	309	711	1169	1.071628e-05	2.465785e-05	4.054152e-05	-4.392100e+00	...	144	28778450	...	5.003744e-06
TCGA-BR-4257-01A-01D-1126-08	1273	1272	1	911	7.855460e-04	coding only	1	28834635	...	361	736	1273	1.251967e-05	2.552486e-05	4.414830e-05	-4.355086e+00	...	172	28778450	...	5.976694e-06
TCGA-BR-4267-01A-01D-1126-08	103	103	0	78	0	coding only	1	28834635	...	25	75	103	8.670129e-07	2.601039e-06	3.572093e-06	-5.447077e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-4279-01A-01D-1126-08	57	57	0	36	0	coding only	1	28834635	...	21	32	57	7.282908e-07	1.109776e-06	1.976789e-06	-5.704040e+00	...	4	28778450	...	1.389929e-07
TCGA-BR-4280-01A-01D-1126-08	881	880	1	693	1.135074e-03	coding only	1	28834635	...	187	525	881	6.485256e-06	1.820727e-05	3.055353e-05	-4.514939e+00	...	167	28778450	...	5.802953e-06
TCGA-BR-4292-01A-01D-1126-08	1661	1659	2	1256	1.204094e-03	coding only	1	28834635	...	402	940	1660	1.394157e-05	3.259968e-05	5.756966e-05	-4.239806e+00	...	311	28778450	...	1.080670e-05
TCGA-BR-4294-01A-01D-1126-08	34	34	0	28	0	coding only	1	28834635	...	6	26	34	2.080831e-07	9.016934e-07	1.179138e-06	-5.928436e+00	...	2	28778450	...	6.949645e-08
TCGA-BR-4357-01A-01D-1158-08	283	283	0	216	0	coding only	1	28834635	...	67	210	283	2.323595e-06	7.282908e-06	9.814586e-06	-5.008128e+00	...	6	28778450	...	2.084893e-07
TCGA-BR-4361-01A-01D-1158-08	3373	3372	1	2500	2.964720e-04	coding only	1	28834635	...	872	2107	3372	3.024141e-05	7.307185e-05	1.169427e-04	-3.932027e+00	...	386	28778450	...	1.341281e-05
TCGA-BR-4362-01A-01D-1158-08	2065	2065	0	1588	0	coding only	1	28834635	...	477	1255	2064	1.654261e-05	4.352405e-05	7.158058e-05	-4.145205e+00	...	332	28778450	...	1.153641e-05
TCGA-BR-4363-01A-01D-1158-08	693	693	0	536	0	coding only	1	28834635	...	157	362	693	5.444841e-06	1.255435e-05	2.403360e-05	-4.619181e+00	...	172	28778450	...	5.976694e-06
TCGA-BR-4366-01A-01D-1158-08	166	166	0	123	0	coding only	1	28834635	...	43	121	166	1.491262e-06	4.196342e-06	5.756966e-06	-5.239806e+00	...	2	28778450	...	6.949645e-08
TCGA-BR-4368-01A-01D-1158-08	1642	1642	0	1221	0	coding only	1	28834635	...	421	962	1642	1.460050e-05	3.336266e-05	5.694541e-05	-4.244541e+00	...	256	28778450	...	8.895545e-06
TCGA-BR-4369-01A-01D-1158-08	200	200	0	148	0	coding only	1	28834635	...	52	147	200	1.803387e-06	5.098036e-06	6.936103e-06	-5.158884e+00	...	1	28778450	...	3.474822e-08
TCGA-BR-4370-01A-01D-1158-08	1334	1334	0	1000	0	coding only	1	28834635	...	334	782	1333	1.158329e-05	2.712016e-05	4.622913e-05	-4.335084e+00	...	212	28778450	...	7.366623e-06
TCGA-BR-4371-01A-01D-1158-08	182	182	0	131	0	coding only	1	28834635	...	51	131	182	1.768706e-06	4.543148e-06	6.311854e-06	-5.199843e+00	...	0	28778450	...	0
TCGA-BR-6452-01A-12D-1800-08	8772	8771	1	6501	1.139991e-04	coding only	1	28834635	...	2270	6021	8769	7.872477e-05	2.088114e-04	3.041134e-04	-3.516964e+00	...	466	28778450	...	1.619267e-05
TCGA-BR-6453-01A-11D-1800-08	221	221	0	161	0	coding only	1	28834635	...	60	158	221	2.080831e-06	5.479521e-06	7.664394e-06	-5.115522e+00	...	1	28778450	...	3.474822e-08
TCGA-BR-6454-01A-11D-1800-08	176	176	0	133	0	coding only	1	28834635	...	43	122	176	1.491262e-06	4.231023e-06	6.103771e-06	-5.214402e+00	...	10	28778450	...	3.474822e-07
TCGA-BR-6455-01A-11D-1800-08	114	114	0	76	0	coding only	1	28834635	...	38	73	114	1.317860e-06	2.531678e-06	3.953579e-06	-5.403010e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-6456-01A-11D-1800-08	51	51	0	37	0	coding only	1	28834635	...	14	34	51	4.855272e-07	1.179138e-06	1.768706e-06	-5.752344e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-6457-01A-21D-1800-08	142	142	0	106	0	coding only	1	28834635	...	36	105	142	1.248499e-06	3.641454e-06	4.924633e-06	-5.307626e+00	...	1	28778450	...	3.474822e-08
TCGA-BR-6458-01A-11D-1800-08	344	344	0	258	0	coding only	1	28834635	...	86	252	344	2.982524e-06	8.739490e-06	1.193010e-05	-4.923356e+00	...	6	28778450	...	2.084893e-07
TCGA-BR-6563-01A-13D-2053-08	86	86	0	66	0	coding only	1	28834635	...	20	65	86	6.936103e-07	2.254233e-06	2.982524e-06	-5.525416e+00	...	1	28778450	...	3.474822e-08
TCGA-BR-6564-01A-12D-1882-08	42	42	0	30	0	coding only	1	28834635	...	12	27	42	4.161662e-07	9.363739e-07	1.456582e-06	-5.836665e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-6565-01A-11D-1800-08	169	169	0	134	0	coding only	1	28834635	...	35	131	169	1.213818e-06	4.543148e-06	5.861007e-06	-5.232028e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-6566-01A-11D-1800-08	1175	1172	3	875	2.553191e-03	coding only	1	28834635	...	296	726	1173	1.026543e-05	2.517805e-05	4.068024e-05	-4.390616e+00	...	149	28778450	...	5.177485e-06
TCGA-BR-6705-01A-12D-1882-08	120	120	0	93	0	coding only	1	28834635	...	27	93	120	9.363739e-07	3.225288e-06	4.161662e-06	-5.380733e+00	...	0	28778450	...	0
TCGA-BR-6706-01A-11D-1882-08	256	256	0	201	0	coding only	1	28834635	...	55	197	256	1.907428e-06	6.832062e-06	8.878212e-06	-5.051674e+00	...	4	28778450	...	1.389929e-07
TCGA-BR-6707-01A-11D-1882-08	80	80	0	62	0	coding only	1	28834635	...	18	60	80	6.242493e-07	2.080831e-06	2.774441e-06	-5.556824e+00	...	2	28778450	...	6.949645e-08
TCGA-BR-6710-01A-11D-1882-08	1	1	0	1	0	coding only	1	28834635	...	0	0	1	0	0	3.468052e-08	-7.459914e+00	...	1	28778450	...	3.474822e-08
TCGA-BR-6801-01A-11D-1882-08	58	58	0	40	0	coding only	1	28834635	...	18	35	58	6.242493e-07	1.213818e-06	2.011470e-06	-5.696486e+00	...	5	28778450	...	1.737411e-07
TCGA-BR-6802-01A-11D-1882-08	583	583	0	422	0	coding only	1	28834635	...	161	354	583	5.583563e-06	1.227690e-05	2.021874e-05	-4.694246e+00	...	66	28778450	...	2.293383e-06
TCGA-BR-6803-01A-11D-1882-08	20	20	0	16	0	coding only	1	28834635	...	4	14	20	1.387221e-07	4.855272e-07	6.936103e-07	-6.158884e+00	...	2	28778450	...	6.949645e-08
TCGA-BR-6852-01A-11D-1882-08	1377	1375	2	1043	1.452433e-03	coding only	1	28834635	...	332	849	1376	1.151393e-05	2.944376e-05	4.772039e-05	-4.321296e+00	...	192	28778450	...	6.671659e-06
TCGA-BR-7196-01A-11D-2053-08	84	84	0	61	0	coding only	1	28834635	...	23	58	84	7.976519e-07	2.011470e-06	2.913163e-06	-5.535635e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-7197-01A-11D-2201-08	201	200	1	155	4.975124e-03	coding only	1	28834635	...	45	146	201	1.560623e-06	5.063355e-06	6.970784e-06	-5.156718e+00	...	9	28778450	...	3.127340e-07
TCGA-BR-7703-01A-11D-2053-08	864	864	0	657	0	coding only	1	28834635	...	207	532	864	7.178867e-06	1.845003e-05	2.996397e-05	-4.523401e+00	...	123	28778450	...	4.274031e-06
TCGA-BR-7707-01A-11D-2053-08	1723	1722	1	1289	5.803831e-04	coding only	1	28834635	...	433	1090	1721	1.501666e-05	3.780176e-05	5.968517e-05	-4.224134e+00	...	192	28778450	...	6.671659e-06
TCGA-BR-7715-01A-11D-2053-08	164	164	0	128	0	coding only	1	28834635	...	36	120	164	1.248499e-06	4.161662e-06	5.687605e-06	-5.245071e+00	...	8	28778450	...	2.779858e-07
TCGA-BR-7716-01A-21D-2053-08	176	176	0	136	0	coding only	1	28834635	...	40	134	176	1.387221e-06	4.647189e-06	6.103771e-06	-5.214402e+00	...	2	28778450	...	6.949645e-08
TCGA-BR-7717-01A-11D-2053-08	167	167	0	117	0	coding only	1	28834635	...	50	114	167	1.734026e-06	3.953579e-06	5.791646e-06	-5.237198e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-7722-01A-31D-2201-08	61	61	0	47	0	coding only	1	28834635	...	14	42	61	4.855272e-07	1.456582e-06	2.115511e-06	-5.674585e+00	...	4	28778450	...	1.389929e-07
TCGA-BR-7723-01A-11D-2053-08	178	178	0	131	0	coding only	1	28834635	...	47	129	178	1.629984e-06	4.473786e-06	6.173132e-06	-5.209494e+00	...	2	28778450	...	6.949645e-08
TCGA-BR-7851-01A-11D-2201-08	1797	1796	1	1306	5.564830e-04	coding only	1	28834635	...	490	1023	1796	1.699345e-05	3.547817e-05	6.228621e-05	-4.205608e+00	...	281	28778450	...	9.764251e-06
TCGA-BR-7901-01A-11D-2201-08	235	235	0	169	0	coding only	1	28834635	...	66	164	235	2.288914e-06	5.687605e-06	8.149921e-06	-5.088847e+00	...	5	28778450	...	1.737411e-07
TCGA-BR-7957-01A-11D-2201-08	57	57	0	46	0	coding only	1	28834635	...	11	44	57	3.814857e-07	1.525943e-06	1.976789e-06	-5.704040e+00	...	2	28778450	...	6.949645e-08
TCGA-BR-7958-01A-21D-2340-08	182	182	0	143	0	coding only	1	28834635	...	39	135	182	1.352540e-06	4.681870e-06	6.311854e-06	-5.199843e+00	...	7	28778450	...	2.432376e-07
TCGA-BR-7959-01A-11D-2340-08	111	111	0	90	0	coding only	1	28834635	...	21	87	111	7.282908e-07	3.017205e-06	3.849537e-06	-5.414591e+00	...	2	28778450	...	6.949645e-08
TCGA-BR-8058-01A-31D-2340-08	57	57	0	47	0	coding only	1	28834635	...	10	44	57	3.468052e-07	1.525943e-06	1.976789e-06	-5.704040e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-8059-01A-11D-2340-08	812	812	0	635	0	coding only	1	28834635	...	177	525	812	6.138451e-06	1.820727e-05	2.816058e-05	-4.550358e+00	...	110	28778450	...	3.822305e-06
TCGA-BR-8077-01A-11D-2340-08	135	134	1	104	7.407407e-03	coding only	1	28834635	...	30	97	135	1.040415e-06	3.364010e-06	4.681870e-06	-5.329581e+00	...	7	28778450	...	2.432376e-07
TCGA-BR-8078-01A-11D-2340-08	1926	1925	1	1506	5.192108e-04	coding only	1	28834635	...	419	1007	1925	1.453114e-05	3.492328e-05	6.675999e-05	-4.175484e+00	...	495	28778450	...	1.720037e-05
TCGA-BR-8080-01A-11D-2340-08	168	168	0	133	0	coding only	1	28834635	...	35	129	168	1.213818e-06	4.473786e-06	5.826327e-06	-5.234605e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-8081-01A-11D-2340-08	1105	1105	0	813	0	coding only	1	28834635	...	292	620	1104	1.012671e-05	2.150192e-05	3.828729e-05	-4.416945e+00	...	190	28778450	...	6.602162e-06
TCGA-BR-8284-01A-11D-2340-08	378	378	0	273	0	coding only	1	28834635	...	105	251	378	3.641454e-06	8.704809e-06	1.310923e-05	-4.882423e+00	...	21	28778450	...	7.297127e-07
TCGA-BR-8286-01A-12D-2340-08	164	164	0	113	0	coding only	1	28834635	...	51	101	164	1.768706e-06	3.502732e-06	5.687605e-06	-5.245071e+00	...	12	28778450	...	4.169787e-07
TCGA-BR-8289-01A-11D-2340-08	227	226	1	181	4.405286e-03	coding only	1	28834635	...	45	172	227	1.560623e-06	5.965049e-06	7.872477e-06	-5.103889e+00	...	9	28778450	...	3.127340e-07
TCGA-BR-8291-01A-11D-2340-08	31	31	0	26	0	coding only	1	28834635	...	5	21	30	1.734026e-07	7.282908e-07	1.040415e-06	-5.982793e+00	...	4	28778450	...	1.389929e-07
TCGA-BR-8295-01A-11D-2340-08	60	60	0	44	0	coding only	1	28834635	...	16	33	60	5.548882e-07	1.144457e-06	2.080831e-06	-5.681763e+00	...	9	28778450	...	3.127340e-07
TCGA-BR-8296-01A-11D-2340-08	88	88	0	61	0	coding only	1	28834635	...	27	59	88	9.363739e-07	2.046150e-06	3.051885e-06	-5.515432e+00	...	1	28778450	...	3.474822e-08
TCGA-BR-8297-01A-12D-2340-08	302	302	0	226	0	coding only	1	28834635	...	76	222	301	2.635719e-06	7.699074e-06	1.043884e-05	-4.981348e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-8360-01A-11D-2340-08	1093	1093	0	814	0	coding only	1	28834635	...	279	602	1093	9.675864e-06	2.087767e-05	3.790580e-05	-4.421294e+00	...	211	28778450	...	7.331875e-06
TCGA-BR-8361-01A-11D-2340-08	1941	1941	0	1483	0	coding only	1	28834635	...	458	1092	1940	1.588368e-05	3.787112e-05	6.728020e-05	-4.172113e+00	...	385	28778450	...	1.337807e-05
TCGA-BR-8363-01A-11D-2340-08	1418	1418	0	1079	0	coding only	1	28834635	...	339	860	1418	1.175669e-05	2.982524e-05	4.917697e-05	-4.308238e+00	...	218	28778450	...	7.575113e-06
TCGA-BR-8364-01A-11D-2340-08	24	24	0	19	0	coding only	1	28834635	...	5	16	24	1.734026e-07	5.548882e-07	8.323324e-07	-6.079703e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-8365-01A-21D-2340-08	26	26	0	21	0	coding only	1	28834635	...	5	19	26	1.734026e-07	6.589298e-07	9.016934e-07	-6.044941e+00	...	2	28778450	...	6.949645e-08
TCGA-BR-8366-01A-11D-2340-08	190	190	0	154	0	coding only	1	28834635	...	36	150	189	1.248499e-06	5.202077e-06	6.554617e-06	-5.183453e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-8367-01A-11D-2340-08	75	75	0	58	0	coding only	1	28834635	...	17	49	74	5.895688e-07	1.699345e-06	2.566358e-06	-5.590683e+00	...	8	28778450	...	2.779858e-07
TCGA-BR-8368-01A-11D-2340-08	1228	1228	0	910	0	coding only	1	28834635	...	318	644	1227	1.102840e-05	2.233425e-05	4.255299e-05	-4.371070e+00	...	263	28778450	...	9.138783e-06
TCGA-BR-8369-01A-11D-2340-08	230	230	0	180	0	coding only	1	28834635	...	50	175	230	1.734026e-06	6.069090e-06	7.976519e-06	-5.098187e+00	...	5	28778450	...	1.737411e-07
TCGA-BR-8370-01A-11D-2340-08	121	121	0	87	0	coding only	1	28834635	...	34	82	121	1.179138e-06	2.843802e-06	4.196342e-06	-5.377129e+00	...	5	28778450	...	1.737411e-07
TCGA-BR-8371-01A-11D-2340-08	23	23	0	15	0	coding only	1	28834635	...	8	14	23	2.774441e-07	4.855272e-07	7.976519e-07	-6.098187e+00	...	1	28778450	...	3.474822e-08
TCGA-BR-8372-01A-11D-2340-08	1552	1549	3	1167	1.932990e-03	coding only	1	28834635	...	382	882	1551	1.324796e-05	3.058821e-05	5.378948e-05	-4.269303e+00	...	283	28778450	...	9.833747e-06
TCGA-BR-8373-01A-11D-2340-08	109	109	0	72	0	coding only	1	28834635	...	37	63	109	1.283179e-06	2.184872e-06	3.780176e-06	-5.422488e+00	...	9	28778450	...	3.127340e-07
TCGA-BR-8380-01A-11D-2340-08	81	81	0	61	0	coding only	1	28834635	...	20	60	81	6.936103e-07	2.080831e-06	2.809122e-06	-5.551429e+00	...	1	28778450	...	3.474822e-08
TCGA-BR-8381-01A-11D-2394-08	138	138	0	98	0	coding only	1	28834635	...	40	96	138	1.387221e-06	3.329329e-06	4.785911e-06	-5.320035e+00	...	2	28778450	...	6.949645e-08
TCGA-BR-8382-01A-11D-2394-08	1024	1024	0	761	0	coding only	1	28834635	...	262	627	1021	9.086295e-06	2.174468e-05	3.540881e-05	-4.450889e+00	...	130	28778450	...	4.517269e-06
TCGA-BR-8384-01A-21D-2394-08	46	46	0	39	0	coding only	1	28834635	...	7	39	46	2.427636e-07	1.352540e-06	1.595304e-06	-5.797157e+00	...	0	28778450	...	0
TCGA-BR-8483-01A-31D-2394-08	140	140	0	107	0	coding only	1	28834635	...	33	97	140	1.144457e-06	3.364010e-06	4.855272e-06	-5.313786e+00	...	10	28778450	...	3.474822e-07
TCGA-BR-8484-01A-11D-2394-08	95	95	0	61	0	coding only	1	28834635	...	34	61	95	1.179138e-06	2.115511e-06	3.294649e-06	-5.482191e+00	...	0	28778450	...	0
TCGA-BR-8485-01A-11D-2394-08	346	346	0	262	0	coding only	1	28834635	...	84	255	346	2.913163e-06	8.843531e-06	1.199946e-05	-4.920838e+00	...	7	28778450	...	2.432376e-07
TCGA-BR-8486-01A-31D-2394-08	63	63	0	51	0	coding only	1	28834635	...	12	46	63	4.161662e-07	1.595304e-06	2.184872e-06	-5.660574e+00	...	5	28778450	...	1.737411e-07
TCGA-BR-8487-01A-11D-2394-08	3692	3689	3	2803	8.125677e-04	coding only	1	28834635	...	886	2207	3690	3.072694e-05	7.653990e-05	1.279711e-04	-3.892888e+00	...	590	28778450	...	2.050145e-05
TCGA-BR-8588-01A-11D-2394-08	139	139	0	102	0	coding only	1	28834635	...	37	99	139	1.283179e-06	3.433371e-06	4.820592e-06	-5.316900e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-8589-01A-11D-2394-08	1230	1230	0	980	0	coding only	1	28834635	...	250	969	1230	8.670129e-06	3.360542e-05	4.265703e-05	-4.370009e+00	...	10	28778450	...	3.474822e-07
TCGA-BR-8590-01A-11D-2394-08	138	137	1	105	7.246377e-03	coding only	1	28834635	...	32	101	138	1.109776e-06	3.502732e-06	4.785911e-06	-5.320035e+00	...	4	28778450	...	1.389929e-07
TCGA-BR-8591-01A-11D-2394-08	1767	1765	2	1337	1.131862e-03	coding only	1	28834635	...	428	1017	1767	1.484326e-05	3.527008e-05	6.128047e-05	-4.212678e+00	...	317	28778450	...	1.101519e-05
TCGA-BR-8592-01A-11D-2394-08	42	42	0	34	0	coding only	1	28834635	...	8	30	42	2.774441e-07	1.040415e-06	1.456582e-06	-5.836665e+00	...	4	28778450	...	1.389929e-07
TCGA-BR-8676-01A-11D-2394-08	94	94	0	73	0	coding only	1	28834635	...	21	66	94	7.282908e-07	2.288914e-06	3.259968e-06	-5.486787e+00	...	6	28778450	...	2.084893e-07
TCGA-BR-8677-01A-11D-2394-08	80	80	0	57	0	coding only	1	28834635	...	23	49	80	7.976519e-07	1.699345e-06	2.774441e-06	-5.556824e+00	...	8	28778450	...	2.779858e-07
TCGA-BR-8678-01A-11D-2394-08	126	126	0	98	0	coding only	1	28834635	...	28	90	126	9.710544e-07	3.121246e-06	4.369745e-06	-5.359544e+00	...	8	28778450	...	2.779858e-07
TCGA-BR-8679-01A-11D-2394-08	175	175	0	130	0	coding only	1	28834635	...	45	124	175	1.560623e-06	4.300384e-06	6.069090e-06	-5.216876e+00	...	6	28778450	...	2.084893e-07
TCGA-BR-8680-01A-11D-2394-08	6709	6704	5	5248	7.452676e-04	coding only	1	28834635	...	1454	5206	6707	5.042547e-05	1.805468e-04	2.326022e-04	-3.633386e+00	...	29	28778450	...	1.007698e-06
TCGA-BR-8682-01A-11D-2394-08	81	81	0	58	0	coding only	1	28834635	...	23	51	81	7.976519e-07	1.768706e-06	2.809122e-06	-5.551429e+00	...	7	28778450	...	2.432376e-07
TCGA-BR-8683-01A-11D-2394-08	167	167	0	125	0	coding only	1	28834635	...	42	119	167	1.456582e-06	4.126981e-06	5.791646e-06	-5.237198e+00	...	5	28778450	...	1.737411e-07
TCGA-BR-8686-01A-11D-2394-08	124	124	0	84	0	coding only	1	28834635	...	40	79	124	1.387221e-06	2.739761e-06	4.300384e-06	-5.366493e+00	...	5	28778450	...	1.737411e-07
TCGA-BR-8687-01A-11D-2394-08	201	201	0	150	0	coding only	1	28834635	...	51	146	201	1.768706e-06	5.063355e-06	6.970784e-06	-5.156718e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-8690-01A-11D-2394-08	179	179	0	132	0	coding only	1	28834635	...	47	125	179	1.629984e-06	4.335064e-06	6.207812e-06	-5.207061e+00	...	6	28778450	...	2.084893e-07
TCGA-BR-A44T-01A-32D-A24D-08	29	29	0	16	0	coding only	1	28834635	...	13	15	29	4.508467e-07	5.202077e-07	1.005735e-06	-5.997516e+00	...	0	28778450	...	0
TCGA-BR-A44U-01A-11D-A24D-08	102	102	0	72	0	coding only	1	28834635	...	30	67	102	1.040415e-06	2.323595e-06	3.537413e-06	-5.451314e+00	...	5	28778450	...	1.737411e-07
TCGA-BR-A452-01A-91D-A25D-08	126	126	0	92	0	coding only	1	28834635	...	34	81	126	1.179138e-06	2.809122e-06	4.369745e-06	-5.359544e+00	...	11	28778450	...	3.822305e-07
TCGA-BR-A453-01A-11D-A24D-08	76	76	0	53	0	coding only	1	28834635	...	23	51	76	7.976519e-07	1.768706e-06	2.635719e-06	-5.579101e+00	...	2	28778450	...	6.949645e-08
TCGA-BR-A4CQ-01A-12D-A25D-08	191	190	1	140	5.235602e-03	coding only	1	28834635	...	50	135	191	1.734026e-06	4.681870e-06	6.623978e-06	-5.178881e+00	...	4	28778450	...	1.389929e-07
TCGA-BR-A4CR-01A-11D-A24D-08	77	77	0	46	0	coding only	1	28834635	...	31	41	77	1.075096e-06	1.421901e-06	2.670400e-06	-5.573424e+00	...	5	28778450	...	1.737411e-07
TCGA-BR-A4CS-01A-11D-A24D-08	182	182	0	132	0	coding only	1	28834635	...	50	123	182	1.734026e-06	4.265703e-06	6.311854e-06	-5.199843e+00	...	8	28778450	...	2.779858e-07
TCGA-BR-A4IU-01A-22D-A25D-08	26	26	0	21	0	coding only	1	28834635	...	5	20	26	1.734026e-07	6.936103e-07	9.016934e-07	-6.044941e+00	...	1	28778450	...	3.474822e-08
TCGA-BR-A4IV-01A-31D-A25D-08	28	28	0	21	0	coding only	1	28834635	...	7	20	28	2.427636e-07	6.936103e-07	9.710544e-07	-6.012756e+00	...	1	28778450	...	3.474822e-08
TCGA-BR-A4IY-01A-11D-A25D-08	158	158	0	123	0	coding only	1	28834635	...	35	110	158	1.213818e-06	3.814857e-06	5.479521e-06	-5.261257e+00	...	12	28778450	...	4.169787e-07
TCGA-BR-A4IZ-01A-32D-A25D-08	10	10	0	9	0	coding only	1	28834635	...	1	9	10	3.468052e-08	3.121246e-07	3.468052e-07	-6.459914e+00	...	0	28778450	...	0
TCGA-BR-A4J1-01A-11D-A25D-08	79	79	0	58	0	coding only	1	28834635	...	21	54	79	7.282908e-07	1.872748e-06	2.739761e-06	-5.562287e+00	...	4	28778450	...	1.389929e-07
TCGA-BR-A4J2-01A-21D-A25D-08	49	49	0	31	0	coding only	1	28834635	...	18	30	49	6.242493e-07	1.040415e-06	1.699345e-06	-5.769718e+00	...	1	28778450	...	3.474822e-08
TCGA-BR-A4J4-01A-12D-A25D-08	90	90	0	74	0	coding only	1	28834635	...	16	70	90	5.548882e-07	2.427636e-06	3.121246e-06	-5.505672e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-A4J6-01A-11D-A25D-08	40	40	0	29	0	coding only	1	28834635	...	11	26	40	3.814857e-07	9.016934e-07	1.387221e-06	-5.857854e+00	...	3	28778450	...	1.042447e-07
TCGA-BR-A4J7-01A-31D-A25D-08	57	57	0	41	0	coding only	1	28834635	...	16	41	57	5.548882e-07	1.421901e-06	1.976789e-06	-5.704040e+00	...	0	28778450	...	0
TCGA-BR-A4J8-01A-11D-A25D-08	111	111	0	70	0	coding only	1	28834635	...	41	65	111	1.421901e-06	2.254233e-06	3.849537e-06	-5.414591e+00	...	4	28778450	...	1.389929e-07
TCGA-BR-A4PD-01A-11D-A25D-08	173	173	0	131	0	coding only	1	28834635	...	42	124	173	1.456582e-06	4.300384e-06	5.999729e-06	-5.221868e+00	...	7	28778450	...	2.432376e-07
TCGA-BR-A4PE-01A-31D-A25D-08	238	238	0	179	0	coding only	1	28834635	...	59	166	238	2.046150e-06	5.756966e-06	8.253963e-06	-5.083338e+00	...	13	28778450	...	4.517269e-07
TCGA-BR-A4PF-01A-11D-A25D-08	110	110	0	92	0	coding only	1	28834635	...	18	83	110	6.242493e-07	2.878483e-06	3.814857e-06	-5.418522e+00	...	9	28778450	...	3.127340e-07
TCGA-BR-A4QI-01A-12D-A25D-08	150	150	0	110	0	coding only	1	28834635	...	40	103	150	1.387221e-06	3.572093e-06	5.202077e-06	-5.283823e+00	...	7	28778450	...	2.432376e-07
TCGA-BR-A4QL-01A-31D-A25D-08	2199	2196	3	1672	1.364256e-03	coding only	1	28834635	...	524	1212	2199	1.817259e-05	4.203278e-05	7.626245e-05	-4.117689e+00	...	456	28778450	...	1.584519e-05
TCGA-BR-A4QM-01A-12D-A25D-08	116	116	0	78	0	coding only	1	28834635	...	38	72	116	1.317860e-06	2.496997e-06	4.022940e-06	-5.395456e+00	...	6	28778450	...	2.084893e-07
TCGA-CD-5798-01A-11D-1600-08	100	100	0	77	0	coding only	1	28834635	...	23	72	100	7.976519e-07	2.496997e-06	3.468052e-06	-5.459914e+00	...	5	28778450	...	1.737411e-07
TCGA-CD-5799-01A-11D-1600-08	55	55	0	38	0	coding only	1	28834635	...	17	36	55	5.895688e-07	1.248499e-06	1.907428e-06	-5.719552e+00	...	2	28778450	...	6.949645e-08
TCGA-CD-5800-01A-11D-1600-08	177	177	0	136	0	coding only	1	28834635	...	41	130	177	1.421901e-06	4.508467e-06	6.138451e-06	-5.211941e+00	...	4	28778450	...	1.389929e-07
TCGA-CD-5801-01A-11D-1600-08	594	594	0	460	0	coding only	1	28834635	...	134	455	594	4.647189e-06	1.577963e-05	2.060023e-05	-4.686128e+00	...	4	28778450	...	1.389929e-07
TCGA-CD-5802-01A-11D-1600-08	62	62	0	48	0	coding only	1	28834635	...	14	41	62	4.855272e-07	1.421901e-06	2.150192e-06	-5.667523e+00	...	7	28778450	...	2.432376e-07
TCGA-CD-5803-01A-11D-1600-08	45	45	0	34	0	coding only	1	28834635	...	11	33	45	3.814857e-07	1.144457e-06	1.560623e-06	-5.806702e+00	...	1	28778450	...	3.474822e-08
TCGA-CD-5804-01A-12D-2053-08	103	103	0	80	0	coding only	1	28834635	...	23	67	103	7.976519e-07	2.323595e-06	3.572093e-06	-5.447077e+00	...	13	28778450	...	4.517269e-07
TCGA-CD-5813-01A-11D-1600-08	199	198	1	152	5.025126e-03	coding only	1	28834635	...	46	141	199	1.595304e-06	4.889953e-06	6.901423e-06	-5.161061e+00	...	10	28778450	...	3.474822e-07
TCGA-CD-8524-01A-11D-2340-08	170	170	0	132	0	coding only	1	28834635	...	38	124	170	1.317860e-06	4.300384e-06	5.895688e-06	-5.229466e+00	...	8	28778450	...	2.779858e-07
TCGA-CD-8525-01A-11D-2340-08	92	92	0	73	0	coding only	1	28834635	...	19	65	92	6.589298e-07	2.254233e-06	3.190607e-06	-5.496127e+00	...	7	28778450	...	2.432376e-07
TCGA-CD-8526-01A-11D-2340-08	49	49	0	43	0	coding only	1	28834635	...	6	38	49	2.080831e-07	1.317860e-06	1.699345e-06	-5.769718e+00	...	5	28778450	...	1.737411e-07
TCGA-CD-8527-01A-11D-2340-08	303	303	0	223	0	coding only	1	28834635	...	80	204	303	2.774441e-06	7.074825e-06	1.050820e-05	-4.978472e+00	...	18	28778450	...	6.254680e-07
TCGA-CD-8528-01A-11D-2340-08	116	116	0	87	0	coding only	1	28834635	...	29	86	116	1.005735e-06	2.982524e-06	4.022940e-06	-5.395456e+00	...	1	28778450	...	3.474822e-08
TCGA-CD-8529-01A-11D-2340-08	453	452	1	343	2.207506e-03	coding only	1	28834635	...	109	320	453	3.780176e-06	1.109776e-05	1.571027e-05	-4.803816e+00	...	23	28778450	...	7.992091e-07
TCGA-CD-8530-01A-11D-2340-08	101	101	0	72	0	coding only	1	28834635	...	29	68	101	1.005735e-06	2.358275e-06	3.502732e-06	-5.455593e+00	...	4	28778450	...	1.389929e-07
TCGA-CD-8531-01A-11D-2340-08	267	267	0	204	0	coding only	1	28834635	...	63	189	267	2.184872e-06	6.554617e-06	9.259698e-06	-5.033403e+00	...	15	28778450	...	5.212233e-07
TCGA-CD-8532-01A-11D-2340-08	56	56	0	36	0	coding only	1	28834635	...	20	28	56	6.936103e-07	9.710544e-07	1.942109e-06	-5.711726e+00	...	8	28778450	...	2.779858e-07
TCGA-CD-8534-01A-11D-2340-08	84	84	0	66	0	coding only	1	28834635	...	18	62	84	6.242493e-07	2.150192e-06	2.913163e-06	-5.535635e+00	...	4	28778450	...	1.389929e-07
TCGA-CD-8535-01A-11D-2340-08	301	301	0	218	0	coding only	1	28834635	...	83	201	301	2.878483e-06	6.970784e-06	1.043884e-05	-4.981348e+00	...	16	28778450	...	5.559716e-07
TCGA-CD-8536-01A-11D-2340-08	1062	1062	0	834	0	coding only	1	28834635	...	228	635	1062	7.907157e-06	2.202213e-05	3.683071e-05	-4.433790e+00	...	196	28778450	...	6.810652e-06
TCGA-CD-A486-01A-11D-A24D-08	106	106	0	83	0	coding only	1	28834635	...	23	73	106	7.976519e-07	2.531678e-06	3.676135e-06	-5.434609e+00	...	10	28778450	...	3.474822e-07
TCGA-CD-A487-01A-21D-A24D-08	203	203	0	156	0	coding only	1	28834635	...	47	151	203	1.629984e-06	5.236758e-06	7.040145e-06	-5.152418e+00	...	5	28778450	...	1.737411e-07
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TCGA-CD-A48C-01A-11D-A24D-08	243	243	0	181	0	coding only	1	28834635	...	62	177	243	2.150192e-06	6.138451e-06	8.427365e-06	-5.074308e+00	...	3	28778450	...	1.042447e-07
TCGA-CD-A4MG-01A-11D-A25D-08	3008	3007	1	2277	3.324468e-04	coding only	1	28834635	...	730	1835	3008	2.531678e-05	6.363875e-05	1.043190e-04	-3.981637e+00	...	436	28778450	...	1.515023e-05
TCGA-CD-A4MH-01A-11D-A25D-08	97	97	0	68	0	coding only	1	28834635	...	29	60	97	1.005735e-06	2.080831e-06	3.364010e-06	-5.473143e+00	...	8	28778450	...	2.779858e-07
TCGA-CD-A4MI-01A-21D-A25D-08	1166	1166	0	860	0	coding only	1	28834635	...	306	735	1166	1.061224e-05	2.549018e-05	4.043748e-05	-4.393216e+00	...	123	28778450	...	4.274031e-06
TCGA-CD-A4MJ-01A-11D-A25D-08	802	802	0	623	0	coding only	1	28834635	...	179	448	801	6.207812e-06	1.553687e-05	2.777909e-05	-4.556282e+00	...	173	28778450	...	6.011443e-06
TCGA-CG-4300-01A-01D-1158-08	159	159	0	122	0	coding only	1	28834635	...	37	118	159	1.283179e-06	4.092301e-06	5.514202e-06	-5.258517e+00	...	4	28778450	...	1.389929e-07
TCGA-CG-4301-01A-01D-1158-08	57	57	0	42	0	coding only	1	28834635	...	15	41	57	5.202077e-07	1.421901e-06	1.976789e-06	-5.704040e+00	...	1	28778450	...	3.474822e-08
TCGA-CG-4304-01A-01D-1158-08	84	84	0	55	0	coding only	1	28834635	...	29	48	84	1.005735e-06	1.664665e-06	2.913163e-06	-5.535635e+00	...	7	28778450	...	2.432376e-07
TCGA-CG-4305-01A-01D-1158-08	1389	1389	0	1043	0	coding only	1	28834635	...	346	816	1389	1.199946e-05	2.829930e-05	4.817124e-05	-4.317212e+00	...	225	28778450	...	7.818350e-06
TCGA-CG-4306-01A-01D-1158-08	1327	1326	1	1004	7.535795e-04	coding only	1	28834635	...	322	779	1327	1.116713e-05	2.701612e-05	4.602104e-05	-4.337044e+00	...	223	28778450	...	7.748854e-06
TCGA-CG-4436-01A-01D-1158-08	207	207	0	159	0	coding only	1	28834635	...	48	150	207	1.664665e-06	5.202077e-06	7.178867e-06	-5.143944e+00	...	7	28778450	...	2.432376e-07
TCGA-CG-4437-01A-01D-1800-08	605	604	1	467	1.652893e-03	coding only	1	28834635	...	137	434	605	4.751231e-06	1.505134e-05	2.098171e-05	-4.678159e+00	...	31	28778450	...	1.077195e-06
TCGA-CG-4438-01A-01D-1158-08	156	156	0	124	0	coding only	1	28834635	...	32	120	156	1.109776e-06	4.161662e-06	5.410160e-06	-5.266790e+00	...	4	28778450	...	1.389929e-07
TCGA-CG-4440-01A-01D-1158-08	138	137	1	112	7.246377e-03	coding only	1	28834635	...	25	107	138	8.670129e-07	3.710815e-06	4.785911e-06	-5.320035e+00	...	5	28778450	...	1.737411e-07
TCGA-CG-4441-01A-01D-1800-08	137	137	0	100	0	coding only	1	28834635	...	37	93	137	1.283179e-06	3.225288e-06	4.751231e-06	-5.323194e+00	...	7	28778450	...	2.432376e-07
TCGA-CG-4442-01A-01D-1158-08	1869	1869	0	1415	0	coding only	1	28834635	...	454	1051	1868	1.574495e-05	3.644922e-05	6.478320e-05	-4.188538e+00	...	359	28778450	...	1.247461e-05
TCGA-CG-4443-01A-01D-1158-08	114	114	0	82	0	coding only	1	28834635	...	32	76	114	1.109776e-06	2.635719e-06	3.953579e-06	-5.403010e+00	...	6	28778450	...	2.084893e-07
TCGA-CG-4444-01A-01D-1158-08	203	203	0	144	0	coding only	1	28834635	...	59	141	203	2.046150e-06	4.889953e-06	7.040145e-06	-5.152418e+00	...	3	28778450	...	1.042447e-07
TCGA-CG-4449-01A-01D-1158-08	115	115	0	91	0	coding only	1	28834635	...	24	79	115	8.323324e-07	2.739761e-06	3.988259e-06	-5.399217e+00	...	12	28778450	...	4.169787e-07
TCGA-CG-4455-01A-01D-1158-08	57	57	0	37	0	coding only	1	28834635	...	20	35	57	6.936103e-07	1.213818e-06	1.976789e-06	-5.704040e+00	...	2	28778450	...	6.949645e-08
TCGA-CG-4462-01A-01D-1158-08	85	85	0	56	0	coding only	1	28834635	...	29	55	85	1.005735e-06	1.907428e-06	2.947844e-06	-5.530496e+00	...	1	28778450	...	3.474822e-08
TCGA-CG-4465-01A-01D-1158-08	753	752	1	575	1.328021e-03	coding only	1	28834635	...	177	435	753	6.138451e-06	1.508602e-05	2.611443e-05	-4.583119e+00	...	137	28778450	...	4.760507e-06
TCGA-CG-4466-01A-01D-1158-08	224	224	0	172	0	coding only	1	28834635	...	52	161	224	1.803387e-06	5.583563e-06	7.768435e-06	-5.109666e+00	...	10	28778450	...	3.474822e-07
TCGA-CG-4469-01A-01D-1158-08	345	345	0	270	0	coding only	1	28834635	...	75	260	345	2.601039e-06	9.016934e-06	1.196478e-05	-4.922095e+00	...	9	28778450	...	3.127340e-07
TCGA-CG-4474-01A-02D-1158-08	114	114	0	86	0	coding only	1	28834635	...	28	77	114	9.710544e-07	2.670400e-06	3.953579e-06	-5.403010e+00	...	9	28778450	...	3.127340e-07
TCGA-CG-4475-01A-01D-1158-08	61	61	0	45	0	coding only	1	28834635	...	16	39	61	5.548882e-07	1.352540e-06	2.115511e-06	-5.674585e+00	...	6	28778450	...	2.084893e-07
TCGA-CG-4476-01A-01D-1158-08	140	140	0	114	0	coding only	1	28834635	...	26	110	140	9.016934e-07	3.814857e-06	4.855272e-06	-5.313786e+00	...	4	28778450	...	1.389929e-07
TCGA-CG-4477-01A-01D-1158-08	146	146	0	127	0	coding only	1	28834635	...	19	48	146	6.589298e-07	1.664665e-06	5.063355e-06	-5.295562e+00	...	79	28778450	...	2.745110e-06
TCGA-CG-5717-01A-11D-1600-08	201	201	0	150	0	coding only	1	28834635	...	51	145	201	1.768706e-06	5.028675e-06	6.970784e-06	-5.156718e+00	...	5	28778450	...	1.737411e-07
TCGA-CG-5718-01A-11D-1600-08	100	100	0	77	0	coding only	1	28834635	...	23	72	100	7.976519e-07	2.496997e-06	3.468052e-06	-5.459914e+00	...	4	28778450	...	1.389929e-07
TCGA-CG-5719-01A-11D-1600-08	109	109	0	80	0	coding only	1	28834635	...	29	78	109	1.005735e-06	2.705080e-06	3.780176e-06	-5.422488e+00	...	2	28778450	...	6.949645e-08
TCGA-CG-5720-01A-11D-1600-08	110	110	0	79	0	coding only	1	28834635	...	31	78	110	1.075096e-06	2.705080e-06	3.814857e-06	-5.418522e+00	...	1	28778450	...	3.474822e-08
TCGA-CG-5721-01A-11D-1600-08	5061	5057	4	3778	7.903576e-04	coding only	1	28834635	...	1278	3226	5059	4.432170e-05	1.118793e-04	1.754487e-04	-3.755850e+00	...	545	28778450	...	1.893778e-05
TCGA-CG-5722-01A-21D-1600-08	104	104	0	76	0	coding only	1	28834635	...	28	72	104	9.710544e-07	2.496997e-06	3.606774e-06	-5.442881e+00	...	4	28778450	...	1.389929e-07
TCGA-CG-5723-01A-11D-1600-08	2081	2081	0	1596	0	coding only	1	28834635	...	485	1184	2081	1.682005e-05	4.106173e-05	7.217015e-05	-4.141642e+00	...	408	28778450	...	1.417728e-05
TCGA-CG-5724-01A-11D-1600-08	132	132	0	101	0	coding only	1	28834635	...	31	91	132	1.075096e-06	3.155927e-06	4.577828e-06	-5.339341e+00	...	9	28778450	...	3.127340e-07
TCGA-CG-5726-01A-11D-1600-08	1691	1691	0	1267	0	coding only	1	28834635	...	424	940	1690	1.470454e-05	3.259968e-05	5.861007e-05	-4.232028e+00	...	324	28778450	...	1.125842e-05
TCGA-CG-5727-01A-11D-1600-08	181	181	0	128	0	coding only	1	28834635	...	53	125	181	1.838067e-06	4.335064e-06	6.277173e-06	-5.202236e+00	...	2	28778450	...	6.949645e-08
TCGA-CG-5728-01A-11D-1600-08	1709	1706	3	1283	1.755413e-03	coding only	1	28834635	...	423	962	1709	1.466986e-05	3.336266e-05	5.926900e-05	-4.227172e+00	...	318	28778450	...	1.104993e-05
TCGA-CG-5730-01A-11D-1600-08	195	195	0	136	0	coding only	1	28834635	...	59	129	195	2.046150e-06	4.473786e-06	6.762700e-06	-5.169880e+00	...	7	28778450	...	2.432376e-07
TCGA-CG-5732-01A-11D-1600-08	81	81	0	58	0	coding only	1	28834635	...	23	55	81	7.976519e-07	1.907428e-06	2.809122e-06	-5.551429e+00	...	3	28778450	...	1.042447e-07
TCGA-CG-5733-01A-11D-1600-08	1405	1405	0	1068	0	coding only	1	28834635	...	337	810	1405	1.168733e-05	2.809122e-05	4.872612e-05	-4.312238e+00	...	255	28778450	...	8.860797e-06
TCGA-CG-5734-01A-11D-1600-08	121	121	0	93	0	coding only	1	28834635	...	27	91	119	9.363739e-07	3.155927e-06	4.126981e-06	-5.384367e+00	...	1	28778450	...	3.474822e-08
TCGA-D7-5577-01A-01D-1600-08	134	134	0	107	0	coding only	1	28834635	...	27	101	134	9.363739e-07	3.502732e-06	4.647189e-06	-5.332810e+00	...	6	28778450	...	2.084893e-07
TCGA-D7-5578-01A-01D-1600-08	289	289	0	206	0	coding only	1	28834635	...	83	199	288	2.878483e-06	6.901423e-06	9.987988e-06	-5.000522e+00	...	5	28778450	...	1.737411e-07
TCGA-D7-5579-01A-01D-1600-08	173	173	0	133	0	coding only	1	28834635	...	39	127	172	1.352540e-06	4.404425e-06	5.965049e-06	-5.224386e+00	...	5	28778450	...	1.737411e-07
TCGA-D7-6518-01A-11D-1800-08	113	113	0	83	0	coding only	1	28834635	...	30	78	113	1.040415e-06	2.705080e-06	3.918898e-06	-5.406836e+00	...	5	28778450	...	1.737411e-07
TCGA-D7-6519-01A-11D-1800-08	64	64	0	50	0	coding only	1	28834635	...	14	45	64	4.855272e-07	1.560623e-06	2.219553e-06	-5.653734e+00	...	5	28778450	...	1.737411e-07
TCGA-D7-6520-01A-11D-1800-08	74	74	0	55	0	coding only	1	28834635	...	19	51	74	6.589298e-07	1.768706e-06	2.566358e-06	-5.590683e+00	...	4	28778450	...	1.389929e-07
TCGA-D7-6521-01A-11D-1800-08	93	93	0	72	0	coding only	1	28834635	...	21	70	93	7.282908e-07	2.427636e-06	3.225288e-06	-5.491432e+00	...	1	28778450	...	3.474822e-08
TCGA-D7-6522-01A-11D-1800-08	84	84	0	61	0	coding only	1	28834635	...	23	61	84	7.976519e-07	2.115511e-06	2.913163e-06	-5.535635e+00	...	0	28778450	...	0
TCGA-D7-6524-01A-11D-1800-08	120	120	0	90	0	coding only	1	28834635	...	30	88	120	1.040415e-06	3.051885e-06	4.161662e-06	-5.380733e+00	...	2	28778450	...	6.949645e-08
TCGA-D7-6525-01A-11D-1800-08	186	186	0	134	0	coding only	1	28834635	...	52	126	186	1.803387e-06	4.369745e-06	6.450576e-06	-5.190402e+00	...	8	28778450	...	2.779858e-07
TCGA-D7-6526-01A-11D-1800-08	247	247	0	180	0	coding only	1	28834635	...	67	168	246	2.323595e-06	5.826327e-06	8.531407e-06	-5.068979e+00	...	11	28778450	...	3.822305e-07
TCGA-D7-6527-01A-11D-1800-08	251	251	0	197	0	coding only	1	28834635	...	54	190	251	1.872748e-06	6.589298e-06	8.704809e-06	-5.060241e+00	...	7	28778450	...	2.432376e-07
TCGA-D7-6528-01A-11D-1800-08	393	393	0	306	0	coding only	1	28834635	...	87	295	393	3.017205e-06	1.023075e-05	1.362944e-05	-4.865522e+00	...	11	28778450	...	3.822305e-07
TCGA-D7-6815-01A-11D-1882-08	170	170	0	121	0	coding only	1	28834635	...	49	104	170	1.699345e-06	3.606774e-06	5.895688e-06	-5.229466e+00	...	16	28778450	...	5.559716e-07
TCGA-D7-6817-01A-11D-1882-08	102	102	0	80	0	coding only	1	28834635	...	22	78	102	7.629713e-07	2.705080e-06	3.537413e-06	-5.451314e+00	...	1	28778450	...	3.474822e-08
TCGA-D7-6818-01A-11D-1882-08	175	175	0	145	0	coding only	1	28834635	...	30	140	175	1.040415e-06	4.855272e-06	6.069090e-06	-5.216876e+00	...	5	28778450	...	1.737411e-07
TCGA-D7-6820-01A-11D-1882-08	111	111	0	79	0	coding only	1	28834635	...	32	77	111	1.109776e-06	2.670400e-06	3.849537e-06	-5.414591e+00	...	2	28778450	...	6.949645e-08
TCGA-D7-6822-01A-11D-1882-08	278	278	0	229	0	coding only	1	28834635	...	49	219	277	1.699345e-06	7.595033e-06	9.606503e-06	-5.017435e+00	...	9	28778450	...	3.127340e-07
TCGA-D7-8570-01A-11D-2340-08	146	146	0	109	0	coding only	1	28834635	...	37	97	146	1.283179e-06	3.364010e-06	5.063355e-06	-5.295562e+00	...	12	28778450	...	4.169787e-07
TCGA-D7-8572-01A-11D-2340-08	196	196	0	148	0	coding only	1	28834635	...	48	144	196	1.664665e-06	4.993994e-06	6.797381e-06	-5.167658e+00	...	4	28778450	...	1.389929e-07
TCGA-D7-8573-01A-11D-2340-08	96	96	0	70	0	coding only	1	28834635	...	26	66	96	9.016934e-07	2.288914e-06	3.329329e-06	-5.477643e+00	...	4	28778450	...	1.389929e-07
TCGA-D7-8574-01A-13D-2340-08	35	35	0	23	0	coding only	1	28834635	...	12	21	35	4.161662e-07	7.282908e-07	1.213818e-06	-5.915846e+00	...	2	28778450	...	6.949645e-08
TCGA-D7-8575-01A-11D-2340-08	59	59	0	49	0	coding only	1	28834635	...	10	39	59	3.468052e-07	1.352540e-06	2.046150e-06	-5.689062e+00	...	10	28778450	...	3.474822e-07
TCGA-D7-8576-01A-11D-2340-08	69	69	0	49	0	coding only	1	28834635	...	20	45	69	6.936103e-07	1.560623e-06	2.392956e-06	-5.621065e+00	...	4	28778450	...	1.389929e-07
TCGA-D7-8578-01A-21D-2340-08	59	59	0	47	0	coding only	1	28834635	...	12	45	59	4.161662e-07	1.560623e-06	2.046150e-06	-5.689062e+00	...	2	28778450	...	6.949645e-08
TCGA-D7-8579-01A-11D-2340-08	120	120	0	88	0	coding only	1	28834635	...	32	87	120	1.109776e-06	3.017205e-06	4.161662e-06	-5.380733e+00	...	1	28778450	...	3.474822e-08
TCGA-D7-A4YT-01A-11D-A25D-08	332	332	0	243	0	coding only	1	28834635	...	89	216	332	3.086566e-06	7.490991e-06	1.151393e-05	-4.938776e+00	...	26	28778450	...	9.034538e-07
TCGA-D7-A4YU-01A-21D-A25D-08	241	241	0	194	0	coding only	1	28834635	...	47	187	241	1.629984e-06	6.485256e-06	8.358004e-06	-5.077897e+00	...	6	28778450	...	2.084893e-07
TCGA-D7-A4YV-01A-11D-A25D-08	1064	1062	2	804	1.879699e-03	coding only	1	28834635	...	258	639	1064	8.947573e-06	2.216085e-05	3.690007e-05	-4.432973e+00	...	165	28778450	...	5.733457e-06
TCGA-D7-A4YX-01A-11D-A25D-08	91	91	0	69	0	coding only	1	28834635	...	22	65	91	7.629713e-07	2.254233e-06	3.155927e-06	-5.500873e+00	...	4	28778450	...	1.389929e-07
TCGA-D7-A4YY-01A-11D-A25D-08	574	573	1	407	1.742160e-03	coding only	1	28834635	...	165	293	573	5.722285e-06	1.016139e-05	1.987194e-05	-4.701760e+00	...	114	28778450	...	3.961297e-06
TCGA-D7-A4Z0-01A-22D-A25D-08	334	334	0	266	0	coding only	1	28834635	...	68	259	334	2.358275e-06	8.982253e-06	1.158329e-05	-4.936168e+00	...	6	28778450	...	2.084893e-07
TCGA-EQ-5647-01A-01D-1600-08	102	102	0	72	0	coding only	1	28834635	...	30	72	102	1.040415e-06	2.496997e-06	3.537413e-06	-5.451314e+00	...	0	28778450	...	0
TCGA-EQ-8122-01A-11D-2340-08	211	211	0	160	0	coding only	1	28834635	...	51	150	211	1.768706e-06	5.202077e-06	7.317589e-06	-5.135632e+00	...	9	28778450	...	3.127340e-07
TCGA-EQ-A4SO-01A-11D-A25D-08	199	199	0	156	0	coding only	1	28834635	...	43	134	199	1.491262e-06	4.647189e-06	6.901423e-06	-5.161061e+00	...	22	28778450	...	7.644609e-07
TCGA-F1-6177-01A-11D-1800-08	1585	1584	1	1197	6.309148e-04	coding only	1	28834635	...	387	865	1584	1.342136e-05	2.999865e-05	5.493394e-05	-4.260159e+00	...	326	28778450	...	1.132792e-05
TCGA-F1-6874-01A-11D-1882-08	1117	1117	0	850	0	coding only	1	28834635	...	267	620	1116	9.259698e-06	2.150192e-05	3.870346e-05	-4.412250e+00	...	228	28778450	...	7.922595e-06
TCGA-F1-6875-01A-11D-2053-08	98	98	0	75	0	coding only	1	28834635	...	23	74	98	7.976519e-07	2.566358e-06	3.398690e-06	-5.468688e+00	...	1	28778450	...	3.474822e-08
TCGA-F1-A448-01A-11D-A24D-08	685	683	2	488	2.919708e-03	coding only	1	28834635	...	195	435	685	6.762700e-06	1.508602e-05	2.375615e-05	-4.624224e+00	...	52	28778450	...	1.806908e-06
TCGA-FP-7735-01A-11D-2053-08	72	72	0	54	0	coding only	1	28834635	...	18	49	72	6.242493e-07	1.699345e-06	2.496997e-06	-5.602582e+00	...	5	28778450	...	1.737411e-07
TCGA-FP-7829-01A-11D-2053-08	284	284	0	211	0	coding only	1	28834635	...	73	196	283	2.531678e-06	6.797381e-06	9.814586e-06	-5.008128e+00	...	10	28778450	...	3.474822e-07
TCGA-FP-7916-01A-11D-2201-08	108	108	0	81	0	coding only	1	28834635	...	27	76	108	9.363739e-07	2.635719e-06	3.745496e-06	-5.426491e+00	...	5	28778450	...	1.737411e-07
TCGA-FP-7998-01A-11D-2201-08	80	80	0	61	0	coding only	1	28834635	...	19	61	80	6.589298e-07	2.115511e-06	2.774441e-06	-5.556824e+00	...	0	28778450	...	0
TCGA-FP-8099-01A-11D-2340-08	156	156	0	109	0	coding only	1	28834635	...	47	103	156	1.629984e-06	3.572093e-06	5.410160e-06	-5.266790e+00	...	6	28778450	...	2.084893e-07
TCGA-FP-8209-01A-11D-2340-08	2	2	0	1	0	coding only	1	28834635	...	1	0	2	3.468052e-08	0	6.936103e-08	-7.158884e+00	...	1	28778450	...	3.474822e-08
TCGA-FP-8210-01A-11D-2340-08	6	6	0	5	0	coding only	1	28834635	...	1	5	6	3.468052e-08	1.734026e-07	2.080831e-07	-6.681763e+00	...	0	28778450	...	0
TCGA-FP-8211-01A-11D-2340-08	117	117	0	99	0	coding only	1	28834635	...	18	83	116	6.242493e-07	2.878483e-06	4.022940e-06	-5.395456e+00	...	15	28778450	...	5.212233e-07
TCGA-FP-8631-01A-11D-2394-08	108	108	0	73	0	coding only	1	28834635	...	35	66	108	1.213818e-06	2.288914e-06	3.745496e-06	-5.426491e+00	...	7	28778450	...	2.432376e-07
TCGA-FP-A4BE-01A-12D-A24D-08	1799	1799	0	1360	0	coding only	1	28834635	...	439	1068	1798	1.522475e-05	3.703879e-05	6.235557e-05	-4.205125e+00	...	290	28778450	...	1.007698e-05
TCGA-FP-A4BF-01A-12D-A24D-08	124	124	0	91	0	coding only	1	28834635	...	33	86	123	1.144457e-06	2.982524e-06	4.265703e-06	-5.370009e+00	...	4	28778450	...	1.389929e-07
TCGA-HF-7132-01A-11D-2053-08	1493	1493	0	1112	0	coding only	1	28834635	...	381	885	1490	1.321328e-05	3.069226e-05	5.167397e-05	-4.286728e+00	...	222	28778450	...	7.714106e-06
TCGA-HF-7133-01A-11D-2053-08	87	87	0	68	0	coding only	1	28834635	...	19	63	87	6.589298e-07	2.184872e-06	3.017205e-06	-5.520395e+00	...	5	28778450	...	1.737411e-07
TCGA-HF-7136-01A-11D-2053-08	93	93	0	75	0	coding only	1	28834635	...	18	64	93	6.242493e-07	2.219553e-06	3.225288e-06	-5.491432e+00	...	11	28778450	...	3.822305e-07
TCGA-HJ-7597-01A-21D-2201-08	946	946	0	685	0	coding only	1	28834635	...	261	533	946	9.051614e-06	1.848471e-05	3.280777e-05	-4.484023e+00	...	151	28778450	...	5.246982e-06
TCGA-HU-8243-01A-11D-2340-08	144	144	0	107	0	coding only	1	28834635	...	37	94	144	1.283179e-06	3.259968e-06	4.993994e-06	-5.301552e+00	...	13	28778450	...	4.517269e-07
TCGA-HU-8245-01A-11D-2340-08	78	78	0	62	0	coding only	1	28834635	...	16	51	78	5.548882e-07	1.768706e-06	2.705080e-06	-5.567820e+00	...	11	28778450	...	3.822305e-07
TCGA-HU-8249-01A-11D-2340-08	166	166	0	122	0	coding only	1	28834635	...	44	115	166	1.525943e-06	3.988259e-06	5.756966e-06	-5.239806e+00	...	7	28778450	...	2.432376e-07
TCGA-HU-8602-01A-11D-2394-08	1898	1897	1	1399	5.268704e-04	coding only	1	28834635	...	498	1093	1898	1.727090e-05	3.790580e-05	6.582362e-05	-4.181618e+00	...	301	28778450	...	1.045922e-05
TCGA-HU-8604-01A-11D-2394-08	235	235	0	170	0	coding only	1	28834635	...	65	165	235	2.254233e-06	5.722285e-06	8.149921e-06	-5.088847e+00	...	5	28778450	...	1.737411e-07
TCGA-HU-8608-01A-11D-2394-08	109	109	0	87	0	coding only	1	28834635	...	22	78	109	7.629713e-07	2.705080e-06	3.780176e-06	-5.422488e+00	...	9	28778450	...	3.127340e-07
TCGA-HU-8610-01A-22D-2394-08	74	74	0	60	0	coding only	1	28834635	...	14	55	74	4.855272e-07	1.907428e-06	2.566358e-06	-5.590683e+00	...	5	28778450	...	1.737411e-07
TCGA-HU-A4G2-01A-11D-A25D-08	57	57	0	40	0	coding only	1	28834635	...	17	35	57	5.895688e-07	1.213818e-06	1.976789e-06	-5.704040e+00	...	5	28778450	...	1.737411e-07
TCGA-HU-A4G3-01A-11D-A24D-08	118	118	0	89	0	coding only	1	28834635	...	29	84	118	1.005735e-06	2.913163e-06	4.092301e-06	-5.388032e+00	...	5	28778450	...	1.737411e-07
TCGA-HU-A4G6-01A-11D-A24D-08	95	95	0	71	0	coding only	1	28834635	...	24	60	95	8.323324e-07	2.080831e-06	3.294649e-06	-5.482191e+00	...	11	28778450	...	3.822305e-07
TCGA-HU-A4G8-01A-11D-A25D-08	1773	1772	1	1320	5.640158e-04	coding only	1	28834635	...	452	1013	1771	1.567559e-05	3.513136e-05	6.141919e-05	-4.211696e+00	...	303	28778450	...	1.052871e-05
TCGA-HU-A4G9-01A-11D-A24D-08	944	944	0	709	0	coding only	1	28834635	...	235	518	944	8.149921e-06	1.796451e-05	3.273841e-05	-4.484942e+00	...	189	28778450	...	6.567414e-06
TCGA-HU-A4GC-01A-12D-A25D-08	167	167	0	122	0	coding only	1	28834635	...	45	118	167	1.560623e-06	4.092301e-06	5.791646e-06	-5.237198e+00	...	4	28778450	...	1.389929e-07
TCGA-HU-A4GD-01A-11D-A25D-08	96	96	0	72	0	coding only	1	28834635	...	24	66	96	8.323324e-07	2.288914e-06	3.329329e-06	-5.477643e+00	...	6	28778450	...	2.084893e-07
TCGA-HU-A4GF-01A-11D-A24D-08	152	152	0	119	0	coding only	1	28834635	...	33	109	152	1.144457e-06	3.780176e-06	5.271438e-06	-5.278071e+00	...	10	28778450	...	3.474822e-07
TCGA-HU-A4GH-01A-11D-A24D-08	852	852	0	698	0	coding only	1	28834635	...	154	684	852	5.340799e-06	2.372147e-05	2.954780e-05	-4.529475e+00	...	14	28778450	...	4.864751e-07
TCGA-HU-A4GN-01A-11D-A25D-08	1399	1399	0	1045	0	coding only	1	28834635	...	354	850	1398	1.227690e-05	2.947844e-05	4.848336e-05	-4.314407e+00	...	193	28778450	...	6.706407e-06
TCGA-HU-A4GP-01A-11D-A25D-08	214	213	1	151	4.672897e-03	coding only	1	28834635	...	61	139	213	2.115511e-06	4.820592e-06	7.386950e-06	-5.131535e+00	...	11	28778450	...	3.822305e-07
TCGA-HU-A4GQ-01A-11D-A25D-08	2188	2186	2	1636	9.140768e-04	coding only	1	28834635	...	550	1275	2186	1.907428e-05	4.421766e-05	7.581161e-05	-4.120264e+00	...	355	28778450	...	1.233562e-05
TCGA-HU-A4GT-01A-21D-A25D-08	2010	2009	1	1520	4.975124e-04	coding only	1	28834635	...	489	1162	2009	1.695877e-05	4.029876e-05	6.967316e-05	-4.156935e+00	...	357	28778450	...	1.240512e-05
TCGA-HU-A4GU-01A-11D-A25D-08	1761	1761	0	1292	0	coding only	1	28834635	...	469	1069	1759	1.626516e-05	3.707347e-05	6.100303e-05	-4.214649e+00	...	215	28778450	...	7.470868e-06
TCGA-HU-A4GX-01A-12D-A25D-08	1473	1472	1	1116	6.788866e-04	coding only	1	28834635	...	356	829	1471	1.234626e-05	2.875015e-05	5.101504e-05	-4.292302e+00	...	282	28778450	...	9.798999e-06
TCGA-HU-A4GY-01A-21D-A24D-08	74	74	0	52	0	coding only	1	28834635	...	22	51	74	7.629713e-07	1.768706e-06	2.566358e-06	-5.590683e+00	...	1	28778450	...	3.474822e-08
TCGA-HU-A4H0-01A-11D-A25D-08	195	195	0	147	0	coding only	1	28834635	...	48	140	195	1.664665e-06	4.855272e-06	6.762700e-06	-5.169880e+00	...	7	28778450	...	2.432376e-07
TCGA-HU-A4H2-01A-11D-A25D-08	189	189	0	148	0	coding only	1	28834635	...	41	143	188	1.421901e-06	4.959314e-06	6.519937e-06	-5.185757e+00	...	4	28778450	...	1.389929e-07
TCGA-HU-A4H3-01A-21D-A25D-08	1088	1088	0	831	0	coding only	1	28834635	...	257	597	1088	8.912892e-06	2.070427e-05	3.773240e-05	-4.423286e+00	...	231	28778450	...	8.026840e-06
TCGA-HU-A4H4-01A-21D-A25D-08	799	798	1	587	1.251564e-03	coding only	1	28834635	...	210	530	798	7.282908e-06	1.838067e-05	2.767505e-05	-4.557912e+00	...	56	28778450	...	1.945900e-06
TCGA-HU-A4H5-01A-21D-A25D-08	301	301	0	241	0	coding only	1	28834635	...	60	223	301	2.080831e-06	7.733755e-06	1.043884e-05	-4.981348e+00	...	18	28778450	...	6.254680e-07
TCGA-HU-A4H6-01A-11D-A25D-08	102	102	0	73	0	coding only	1	28834635	...	29	71	102	1.005735e-06	2.462317e-06	3.537413e-06	-5.451314e+00	...	1	28778450	...	3.474822e-08
TCGA-HU-A4H8-01A-11D-A25D-08	1436	1435	1	1076	6.963788e-04	coding only	1	28834635	...	359	821	1436	1.245030e-05	2.847270e-05	4.980122e-05	-4.302760e+00	...	252	28778450	...	8.756552e-06
TCGA-HU-A4HD-01A-11D-A25D-08	200	200	0	150	0	coding only	1	28834635	...	50	143	200	1.734026e-06	4.959314e-06	6.936103e-06	-5.158884e+00	...	7	28778450	...	2.432376e-07
TCGA-IN-7806-01A-11D-2053-08	87	87	0	67	0	coding only	1	28834635	...	20	63	87	6.936103e-07	2.184872e-06	3.017205e-06	-5.520395e+00	...	4	28778450	...	1.389929e-07
TCGA-IN-7808-01A-11D-2201-08	122	122	0	96	0	coding only	1	28834635	...	26	93	122	9.016934e-07	3.225288e-06	4.231023e-06	-5.373555e+00	...	3	28778450	...	1.042447e-07
TCGA-IN-8462-01A-11D-2340-08	136	136	0	102	0	coding only	1	28834635	...	34	92	136	1.179138e-06	3.190607e-06	4.716550e-06	-5.326376e+00	...	10	28778450	...	3.474822e-07
TCGA-IN-8663-01A-11D-2394-08	188	188	0	139	0	coding only	1	28834635	...	49	131	187	1.699345e-06	4.543148e-06	6.485256e-06	-5.188073e+00	...	6	28778450	...	2.084893e-07
TCGA-IP-7968-01A-11D-2201-08	130	130	0	103	0	coding only	1	28834635	...	27	97	130	9.363739e-07	3.364010e-06	4.508467e-06	-5.345971e+00	...	6	28778450	...	2.084893e-07
