[1] "R version 2.15.3 (2013-03-01)"
[1] "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "opt:  METHYLATION"
[1] "vtyp==survival in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==binary in table1 table generation"
                          Clinical feature           
DAYS_TO_DEATH_OR_LAST_FUP "DAYS_TO_DEATH_OR_LAST_FUP"
YEARS_TO_BIRTH            "YEARS_TO_BIRTH"           
NEOPLASM_DISEASESTAGE     "NEOPLASM_DISEASESTAGE"    
PATHOLOGY_T_STAGE         "PATHOLOGY_T_STAGE"        
PATHOLOGY_N_STAGE         "PATHOLOGY_N_STAGE"        
PATHOLOGY_M_STAGE         "PATHOLOGY_M_STAGE"        
RACE                      "RACE"                     
ETHNICITY                 "ETHNICITY"                
                          Statistical test            Significant genes
DAYS_TO_DEATH_OR_LAST_FUP "Cox regression test"       "N=0"            
YEARS_TO_BIRTH            "Spearman correlation test" "N=30"           
NEOPLASM_DISEASESTAGE     "Kruskal-Wallis test"       "N=30"           
PATHOLOGY_T_STAGE         "Spearman correlation test" "N=2"            
PATHOLOGY_N_STAGE         "Spearman correlation test" "N=0"            
PATHOLOGY_M_STAGE         "Wilcoxon test"             "N=30"           
RACE                      "Kruskal-Wallis test"       "N=0"            
ETHNICITY                 "Wilcoxon test"             "N=0"            
                          Associated with
DAYS_TO_DEATH_OR_LAST_FUP " "            
YEARS_TO_BIRTH            "older"        
NEOPLASM_DISEASESTAGE     " "            
PATHOLOGY_T_STAGE         "higher stage" 
PATHOLOGY_N_STAGE         " "            
PATHOLOGY_M_STAGE         "class1"       
RACE                      " "            
ETHNICITY                 " "            
                          &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
DAYS_TO_DEATH_OR_LAST_FUP " "                                                                                       
YEARS_TO_BIRTH            "N=29"                                                                                    
NEOPLASM_DISEASESTAGE     " "                                                                                       
PATHOLOGY_T_STAGE         "N=0"                                                                                     
PATHOLOGY_N_STAGE         " "                                                                                       
PATHOLOGY_M_STAGE         "N=30"                                                                                    
RACE                      " "                                                                                       
ETHNICITY                 " "                                                                                       
                          Associated with      
DAYS_TO_DEATH_OR_LAST_FUP " "             " "  
YEARS_TO_BIRTH            "younger"       "N=1"
NEOPLASM_DISEASESTAGE     " "             " "  
PATHOLOGY_T_STAGE         "lower stage"   "N=2"
PATHOLOGY_N_STAGE         " "             " "  
PATHOLOGY_M_STAGE         "class0"        "N=0"
RACE                      " "             " "  
ETHNICITY                 " "             " "  
[1] "vtyp==survival in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==binary in basici table generation"
