Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	table.1.txt	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	txt	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D1V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D3V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D4V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D12V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D9V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D12V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D2V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D11V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D9V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D11V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D1V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D3V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D10V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D6V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D4V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D4V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D8V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D7V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D5V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D4V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D10V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D6V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D12V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D9V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D12V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D3V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D2V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D11V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D10V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D6V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D9V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D11V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	transformed.cor.cli.txt	processed.events.file	Level_4	txt	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D11V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D12V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D3V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D11V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D4V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D12V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D1V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D9V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D2V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D9V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D11V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D12V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D3V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D3V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D11V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D6V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D10V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D4V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D12V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D10V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D6V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	THYM-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D7V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
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GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D9V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
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GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D3V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D10V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D6V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D4V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D4V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D8V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D7V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D5V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D4V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D10V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D6V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D12V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D9V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D12V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D3V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D2V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D11V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D10V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D6V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D9V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D11V5.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	transformed.cor.cli.txt	processed.events.file	Level_4	txt	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D11V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D12V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D3V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D11V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D4V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D12V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D1V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D9V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D2V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D9V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D11V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D12V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D3V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D3V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D11V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D6V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D10V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D4V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D12V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D10V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D6V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D7V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D6V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D1V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D9V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D8V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D2V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D5V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D10V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D4V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D4V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	D9V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	all_lesions.txt	gdac.broadinstitute.org_THYM-TP.CopyNumber_Gistic2.Level_4.2015040200.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:39	Correlate_Clinical_vs_CopyNumber_Focal_2015040200	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THYM-TP.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2015040200.0.0	yes
