[1] "R version 2.15.3 (2013-03-01)"
[1] "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "opt:  MRNASEQ_EXPR"
[1] "vtyp==survival in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==binary in table1 table generation"
                                       Clinical feature                        
DAYS_TO_DEATH_OR_LAST_FUP              "DAYS_TO_DEATH_OR_LAST_FUP"             
YEARS_TO_BIRTH                         "YEARS_TO_BIRTH"                        
HISTOLOGICAL_TYPE                      "HISTOLOGICAL_TYPE"                     
RADIATIONS_RADIATION_REGIMENINDICATION "RADIATIONS_RADIATION_REGIMENINDICATION"
COMPLETENESS_OF_RESECTION              "COMPLETENESS_OF_RESECTION"             
RACE                                   "RACE"                                  
ETHNICITY                              "ETHNICITY"                             
                                       Statistical test           
DAYS_TO_DEATH_OR_LAST_FUP              "Cox regression test"      
YEARS_TO_BIRTH                         "Spearman correlation test"
HISTOLOGICAL_TYPE                      "Kruskal-Wallis test"      
RADIATIONS_RADIATION_REGIMENINDICATION "Wilcoxon test"            
COMPLETENESS_OF_RESECTION              "Kruskal-Wallis test"      
RACE                                   "Kruskal-Wallis test"      
ETHNICITY                              "Wilcoxon test"            
                                       Significant genes
DAYS_TO_DEATH_OR_LAST_FUP              "N=30"           
YEARS_TO_BIRTH                         "N=30"           
HISTOLOGICAL_TYPE                      "N=30"           
RADIATIONS_RADIATION_REGIMENINDICATION "N=30"           
COMPLETENESS_OF_RESECTION              "N=30"           
RACE                                   "N=30"           
ETHNICITY                              "N=1"            
                                       Associated with         
DAYS_TO_DEATH_OR_LAST_FUP              "shorter survival"      
YEARS_TO_BIRTH                         "older"                 
HISTOLOGICAL_TYPE                      " "                     
RADIATIONS_RADIATION_REGIMENINDICATION "yes"                   
COMPLETENESS_OF_RESECTION              " "                     
RACE                                   " "                     
ETHNICITY                              "not hispanic or latino"
                                       &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
DAYS_TO_DEATH_OR_LAST_FUP              "N=18"                                                                                    
YEARS_TO_BIRTH                         "N=19"                                                                                    
HISTOLOGICAL_TYPE                      " "                                                                                       
RADIATIONS_RADIATION_REGIMENINDICATION "N=30"                                                                                    
COMPLETENESS_OF_RESECTION              " "                                                                                       
RACE                                   " "                                                                                       
ETHNICITY                              "N=1"                                                                                     
                                       Associated with            
DAYS_TO_DEATH_OR_LAST_FUP              "longer survival"    "N=12"
YEARS_TO_BIRTH                         "younger"            "N=11"
HISTOLOGICAL_TYPE                      " "                  " "   
RADIATIONS_RADIATION_REGIMENINDICATION "no"                 "N=0" 
COMPLETENESS_OF_RESECTION              " "                  " "   
RACE                                   " "                  " "   
ETHNICITY                              "hispanic or latino" "N=0" 
[1] "vtyp==survival in basici table generation"
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==binary in basici table generation"
