[1] "R version 2.15.3 (2013-03-01)"
[1] "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "opt:  MUTATION_RATE"
[1] "vtyp==survival in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==binary in table1 table generation"
                                       Clinical feature                        
DAYS_TO_DEATH_OR_LAST_FUP              "DAYS_TO_DEATH_OR_LAST_FUP"             
AGE                                    "AGE"                                   
AGE_mutation.rate                      "AGE_mutation rate"                     
HISTOLOGICAL_TYPE                      "HISTOLOGICAL_TYPE"                     
RADIATIONS_RADIATION_REGIMENINDICATION "RADIATIONS_RADIATION_REGIMENINDICATION"
COMPLETENESS_OF_RESECTION              "COMPLETENESS_OF_RESECTION"             
RACE                                   "RACE"                                  
ETHNICITY                              "ETHNICITY"                             
                                       Statistical test            
DAYS_TO_DEATH_OR_LAST_FUP              "Cox regression test"       
AGE                                    "Spearman correlation test" 
AGE_mutation.rate                      "Linear Regression Analysis"
HISTOLOGICAL_TYPE                      "Kruskal-Wallis test"       
RADIATIONS_RADIATION_REGIMENINDICATION "Wilcoxon test"             
COMPLETENESS_OF_RESECTION              "Kruskal-Wallis test"       
RACE                                   "Kruskal-Wallis test"       
ETHNICITY                              "Wilcoxon test"             
                                       Significant variables Associated with
DAYS_TO_DEATH_OR_LAST_FUP              "N=0"                 " "            
AGE                                    "N=0"                 " "            
AGE_mutation.rate                      "N=0"                 " "            
HISTOLOGICAL_TYPE                      "N=2"                 " "            
RADIATIONS_RADIATION_REGIMENINDICATION "N=0"                 " "            
COMPLETENESS_OF_RESECTION              "N=0"                 " "            
RACE                                   "N=0"                 " "            
ETHNICITY                              "N=0"                 " "            
                                       &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
DAYS_TO_DEATH_OR_LAST_FUP              " "                                                                                       
AGE                                    " "                                                                                       
AGE_mutation.rate                      " "                                                                                       
HISTOLOGICAL_TYPE                      " "                                                                                       
RADIATIONS_RADIATION_REGIMENINDICATION " "                                                                                       
COMPLETENESS_OF_RESECTION              " "                                                                                       
RACE                                   " "                                                                                       
ETHNICITY                              " "                                                                                       
                                       Associated with    
DAYS_TO_DEATH_OR_LAST_FUP              " "             " "
AGE                                    " "             " "
AGE_mutation.rate                      " "             " "
HISTOLOGICAL_TYPE                      " "             " "
RADIATIONS_RADIATION_REGIMENINDICATION " "             " "
COMPLETENESS_OF_RESECTION              " "             " "
RACE                                   " "             " "
ETHNICITY                              " "             " "
[1] "vtyp==survival in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==binary in basici table generation"
