Summary of TCGA Tumor Data
Ingested into Broad GDAC Pipeline
2015_04_02 analyses Run

CohortBCRClinicalCNLowPMethylationmRNAmRNASeqmiRmiRSeqRPPAMAFrawMAF
ACC92929008007908046900
BLCA41239341011241204080409127130395
BRCA1098108010891910815261093010784109770
CESC3073042950307030403071731940
CHOL36363603603603630350
COAD460453450694571534570406331154154
COADREAD6316246151046222226230549461223276
DLBC5847480480280473300
ESCA185174184321850184018412600
FPPP383800000022000
GBM61359257704205401605650214290290
GBMLGG11291067109052936567676565512472576803
HNSC52852252210852805200523212279508
KICH1131106606606606606666
KIPAN9739148830892888890873661644678
KIRC5375335280535725330516454417451
KIRP3232712890291162900291207161161
LAML20020019701940179018801970
LGG51647551352516275160512258286513
LIHC37736337003770371037201980
LUAD585521516120578325150513181230542
LUSC504495501050315450104781951780
MESO877787087086087000
OV6025915860594574296570453412316469
PAAD1851741840184017801781061460
PCPG179179175017901790179801780
PRAD499489492115498049704943524250
READ1711711653516569166014313069122
SARC26025025602600258025822100
SKCM47044746911847004680448204343366
STAD443438442107443027404422642890
STES628612626139628045806263902890
TGCT1501331500150015001501181490
THCA50350150198503050105022224020
THYM1241221230124012001249000
UCEC5605375401065475454505382002480
UCS57575605705705648570
UVM80808008008008012800
Totals113521094510987109110955221710095113510160545665844037