Clinical Features	CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
amp_1p22.3	15 (42%)	21	0.736	0.95	0.23271	0.743	0.70843	0.947	0.73798	0.95	0.20104	0.71	0.072199	0.503	0.16854	0.699	0.20011	0.71	0.73579	0.95	0.42873	0.858
amp_1q22	24 (67%)	12	0.30195	0.772	0.29084	0.772	1	1	0.74449	0.95	0.11945	0.699	0.35245	0.827	0.92469	1	0.40678	0.858	1	1	0.68158	0.947
amp_11q13.3	8 (22%)	28	1	1	0.53457	0.882	1	1	0.0183	0.333	0.60057	0.947	0.04484	0.476	0.29928	0.772	0.97012	1	0.69403	0.947	0.85412	1
amp_12q13.2	10 (28%)	26	1	1	0.80863	0.986	1	1	0.19123	0.699	0.80409	0.986	0.90595	1	0.26131	0.761	0.52061	0.882	0.26005	0.761	0.62865	0.947
del_1p36.21	30 (83%)	6	0.020283	0.333	0.00199	0.114	0.12644	0.699	0.2943	0.772	0.01914	0.333	0.0087099	0.25	0.39054	0.858	0.1291	0.699	0.67737	0.947	0.15215	0.699
del_3p25.3	28 (78%)	8	0.04382	0.476	0.53595	0.882	0.64098	0.947	0.39012	0.858	0.7735	0.956	0.070959	0.503	0.42115	0.858	0.76021	0.95	0.42405	0.858	0.85069	1
del_3p13	28 (78%)	8	0.04382	0.476	0.28514	0.772	0.64098	0.947	0.3737	0.843	1	1	0.28741	0.772	0.54093	0.882	0.24327	0.746	0.69403	0.947	0.99183	1
del_4q34.3	23 (64%)	13	0.50179	0.874	0.47548	0.874	0.26626	0.765	0.16885	0.699	0.19146	0.699	0.32959	0.806	0.19081	0.699	0.48298	0.874	1	1	0.53064	0.882
del_5q13.3	8 (22%)	28	0.2357	0.743	0.16716	0.699	0.62602	0.947	0.30186	0.772	0.02556	0.392	0.15646	0.699	0.85603	1	0.66708	0.947	0.69403	0.947	0.57064	0.924
del_6q13	21 (58%)	15	0.0080051	0.25	0.23337	0.743	0.062592	0.48	0.17916	0.699	0.2698	0.766	0.2515	0.751	0.75471	0.95	0.34545	0.826	0.17598	0.699	0.46835	0.874
del_6q25.3	25 (69%)	11	0.0033753	0.155	0.01473	0.333	0.041914	0.476	0.081579	0.521	0.056539	0.476	0.061569	0.48	0.14017	0.699	0.1811	0.699	0.076864	0.51	0.0365	0.476
del_8p23.1	13 (36%)	23	0.50179	0.874	0.13028	0.699	1	1	0.41326	0.858	0.077559	0.51	0.067729	0.503	0.61249	0.947	0.31451	0.786	0.31007	0.784	0.24583	0.746
del_9p21.3	23 (64%)	13	0.50179	0.874	1	1	1	1	0.15726	0.699	0.67925	0.947	0.15859	0.699	0.1716	0.699	0.62082	0.947	0.15896	0.699	0.73628	0.95
del_9q21.11	19 (53%)	17	0.52508	0.882	0.34834	0.826	1	1	0.01202	0.307	0.69514	0.947	0.18645	0.699	0.32161	0.795	0.42858	0.858	0.516	0.882	0.51444	0.882
del_10q26.12	12 (33%)	24	0.73173	0.95	0.20385	0.71	0.67219	0.947	0.81016	0.986	0.43848	0.862	0.68442	0.947	0.47337	0.874	0.21395	0.714	0.49911	0.874	0.22326	0.734
del_11q25	13 (36%)	23	0.29939	0.772	0.91474	1	0.24647	0.746	0.092369	0.574	0.21269	0.714	0.63929	0.947	0.81551	0.987	0.21427	0.714	0.4837	0.874	0.17041	0.699
del_12q24.13	8 (22%)	28	0.43385	0.86	1	1	1	1	1	1	0.46972	0.874	0.61257	0.947	0.53847	0.882	0.667	0.947	0.42405	0.858	0.8528	1
del_13q21.32	16 (44%)	20	1	1	1	1	1	1	0.47892	0.874	0.83375	1	0.8734	1	0.6191	0.947	0.48881	0.874	1	1	0.28769	0.772
del_14q22.1	14 (39%)	22	0.038774	0.476	0.76761	0.954	0.41889	0.858	0.0078599	0.25	1	1	0.11981	0.699	0.96453	1	0.97327	1	0.73172	0.95	0.40745	0.858
del_14q32.12	20 (56%)	16	0.00024181	0.0185	0.056279	0.476	0.70652	0.947	0.47204	0.874	0.9133	1	0.057929	0.476	0.96634	1	0.75592	0.95	0.17549	0.699	0.37061	0.843
del_14q32.11	20 (56%)	16	0.00024181	0.0185	0.056259	0.476	0.70652	0.947	0.46998	0.874	0.91298	1	0.056299	0.476	0.96613	1	0.75513	0.95	0.17549	0.699	0.37115	0.843
del_14q32.33	20 (56%)	16	0.00024181	0.0185	0.055919	0.476	0.70652	0.947	0.47088	0.874	0.91209	1	0.057489	0.476	0.96621	1	0.75638	0.95	0.17549	0.699	0.36829	0.843
del_16q23.1	7 (19%)	29	0.68426	0.947	0.33583	0.813	0.62602	0.947	0.42901	0.858	0.66089	0.947	0.41309	0.858	0.65927	0.947	0.01918	0.333	1	1	0.66249	0.947