name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-A3-3308-01A-01D-0966-08	97	94	3	72	3.092784e-02	0	coding only	34834024	22	71	6.315664e-07	2.038237e-06
TCGA-A3-3308-01A-01W-0886-08	366	352	14	297	3.825137e-02	1	exome+100bp flanks	34834024	54	278	1.550208e-06	7.980703e-06
TCGA-A3-3311-01A-01D-0966-08	69	68	1	56	1.449275e-02	0	coding only	34834024	12	55	3.444908e-07	1.578916e-06
TCGA-A3-3313-01A-01D-0966-08	141	126	15	104	1.063830e-01	1	exome+100bp flanks	34834024	19	99	5.454437e-07	2.842049e-06
TCGA-A3-3313-01A-01W-0886-08	464	446	18	387	3.879310e-02	1	exome+100bp flanks	34834024	52	360	1.492793e-06	1.033472e-05
TCGA-A3-3316-01A-01D-0966-08	42	42	0	38	0	0	coding only	34834024	4	38	1.148303e-07	1.090887e-06
TCGA-A3-3316-01A-01W-0886-08	457	444	13	390	2.844639e-02	0	coding only	34834024	51	368	1.464086e-06	1.056438e-05
TCGA-A3-3317-01A-01D-0966-08	81	81	0	57	0	0	coding only	34834024	22	53	6.315664e-07	1.521501e-06
TCGA-A3-3319-01A-01D-0966-08	86	81	5	65	5.813953e-02	0	coding only	34834024	15	64	4.306135e-07	1.837284e-06
TCGA-A3-3319-01A-01W-0886-08	345	333	12	284	3.478261e-02	1	exome+100bp flanks	34834024	47	269	1.349256e-06	7.722335e-06
TCGA-A3-3320-01A-01D-0966-08	97	94	3	73	3.092784e-02	0	coding only	34834024	21	73	6.028589e-07	2.095652e-06
TCGA-A3-3320-01A-01W-0886-08	344	327	17	274	4.941860e-02	1	exome+100bp flanks	34834024	52	256	1.492793e-06	7.349137e-06
TCGA-A3-3322-01A-01D-0966-08	63	59	4	45	6.349206e-02	0	coding only	34834024	14	45	4.019059e-07	1.291840e-06
TCGA-A3-3322-01A-01W-0886-08	134	131	3	100	2.238806e-02	0	coding only	34834024	30	97	8.612269e-07	2.784634e-06
TCGA-A3-3322-01A-01W-0898-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-A3-3323-01A-01D-0966-08	52	51	1	41	1.923077e-02	0	coding only	34834024	10	40	2.870756e-07	1.148303e-06
TCGA-A3-3326-01A-01D-0966-08	59	58	1	40	1.694915e-02	0	coding only	34834024	18	39	5.167362e-07	1.119595e-06
TCGA-A3-3331-01A-01W-0886-08	164	154	10	114	6.097561e-02	1	exome+100bp flanks	34834024	38	109	1.090887e-06	3.129125e-06
TCGA-A3-3346-01A-01D-0966-08	102	99	3	74	2.941176e-02	0	coding only	34834024	24	71	6.889816e-07	2.038237e-06
TCGA-A3-3346-01A-01W-0886-08	589	566	23	460	3.904924e-02	1	exome+100bp flanks	34834024	98	437	2.813341e-06	1.254521e-05
TCGA-A3-3347-01A-02D-1386-10	38	36	2	24	5.263158e-02	0	coding only	34834024	12	24	3.444908e-07	6.889816e-07
TCGA-A3-3349-01A-01D-1251-10	43	42	1	36	2.325581e-02	0	coding only	34834024	6	33	1.722454e-07	9.473496e-07
TCGA-A3-3357-01A-02D-1421-08	103	100	3	75	2.912621e-02	0	coding only	34834024	25	73	7.176891e-07	2.095652e-06
TCGA-A3-3358-01A-01D-1534-10	76	73	3	53	3.947368e-02	0	coding only	34834024	20	52	5.741513e-07	1.492793e-06
TCGA-A3-3362-01A-02D-1386-10	54	53	1	40	1.851852e-02	0	coding only	34834024	12	40	3.444908e-07	1.148303e-06
TCGA-A3-3363-01A-01D-0966-08	52	49	3	43	5.769231e-02	0	coding only	34834024	6	42	1.722454e-07	1.205718e-06
TCGA-A3-3363-01A-01W-0886-08	1197	1159	38	1052	3.174603e-02	1	exome+100bp flanks	34834024	104	992	2.985587e-06	2.847790e-05
TCGA-A3-3365-01A-01D-0966-08	40	40	0	34	0	0	coding only	34834024	6	34	1.722454e-07	9.760572e-07
TCGA-A3-3365-01A-01W-0886-08	358	341	17	298	4.748603e-02	1	exome+100bp flanks	34834024	35	283	1.004765e-06	8.124241e-06
TCGA-A3-3365-01A-01W-0898-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-A3-3367-01A-02D-1421-08	75	74	1	60	1.333333e-02	0	coding only	34834024	14	58	4.019059e-07	1.665039e-06
TCGA-A3-3370-01A-02D-1421-08	43	42	1	34	2.325581e-02	0	coding only	34834024	8	34	2.296605e-07	9.760572e-07
TCGA-A3-3372-01A-01D-0966-08	81	80	1	62	1.234568e-02	0	coding only	34834024	18	60	5.167362e-07	1.722454e-06
TCGA-A3-3372-01A-01W-0886-08	184	176	8	151	4.347826e-02	1	exome+100bp flanks	34834024	24	143	6.889816e-07	4.105182e-06
TCGA-A3-3373-01A-02D-1421-08	63	61	2	49	3.174603e-02	0	coding only	34834024	11	47	3.157832e-07	1.349256e-06
TCGA-A3-3374-01A-01D-0966-08	57	44	13	31	2.280702e-01	0	coding only	34834024	11	27	3.157832e-07	7.751042e-07
TCGA-A3-3374-01A-01W-0886-08	848	816	32	716	3.773585e-02	1	exome+100bp flanks	34834024	94	674	2.698511e-06	1.934890e-05
TCGA-A3-3376-01A-02D-1421-08	55	54	1	43	1.818182e-02	0	coding only	34834024	11	42	3.157832e-07	1.205718e-06
TCGA-A3-3378-01A-01D-0966-08	71	69	2	49	2.816901e-02	0	coding only	34834024	20	48	5.741513e-07	1.377963e-06
TCGA-A3-3378-01A-01W-0886-08	266	249	17	213	6.390977e-02	1	exome+100bp flanks	34834024	35	202	1.004765e-06	5.798928e-06
TCGA-A3-3380-01A-01D-0966-08	44	43	1	36	2.272727e-02	0	coding only	34834024	7	34	2.009530e-07	9.760572e-07
TCGA-A3-3380-01A-01W-0886-08	249	239	10	215	4.016064e-02	1	exome+100bp flanks	34834024	21	201	6.028589e-07	5.770221e-06
TCGA-A3-3382-01A-01D-0966-08	109	106	3	88	2.752294e-02	0	coding only	34834024	18	87	5.167362e-07	2.497558e-06
TCGA-A3-3382-01A-01W-0886-08	556	535	21	482	3.776978e-02	1	exome+100bp flanks	34834024	53	448	1.521501e-06	1.286099e-05
TCGA-A3-3383-01A-01D-0966-08	57	56	1	42	1.754386e-02	0	coding only	34834024	13	41	3.731983e-07	1.177010e-06
TCGA-A3-3383-01A-01W-0886-08	161	150	11	137	6.832298e-02	1	exome+100bp flanks	34834024	13	126	3.731983e-07	3.617153e-06
TCGA-A3-3385-01A-02D-1421-08	67	67	0	54	0	0	coding only	34834024	13	54	3.731983e-07	1.550208e-06
TCGA-A3-3385-01A-02W-1475-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-A3-3387-01A-01D-1534-10	88	84	4	68	4.545455e-02	0	coding only	34834024	15	66	4.306135e-07	1.894699e-06
TCGA-A4-7286-01A-11D-2136-08	56	56	0	41	0	0	coding only	34834024	15	38	4.306135e-07	1.090887e-06
TCGA-A4-7287-01A-11D-2136-08	66	65	1	50	1.515152e-02	0	coding only	34834024	15	47	4.306135e-07	1.349256e-06
TCGA-A4-7288-01A-11D-2136-08	100	100	0	78	0	0	coding only	34834024	20	74	5.741513e-07	2.124360e-06
TCGA-A4-7583-01A-11D-2136-08	86	86	0	71	0	0	coding only	34834024	14	69	4.019059e-07	1.980822e-06
TCGA-A4-7584-01A-11D-2136-08	88	87	1	70	1.136364e-02	0	coding only	34834024	14	65	4.019059e-07	1.865992e-06
TCGA-A4-7585-01A-11D-2136-08	117	115	2	96	1.709402e-02	0	coding only	34834024	19	93	5.454437e-07	2.669804e-06
TCGA-A4-7732-01A-11D-2136-08	82	82	0	74	0	0	coding only	34834024	8	69	2.296605e-07	1.980822e-06
TCGA-A4-7734-01A-11D-2136-08	73	72	1	54	1.369863e-02	0	coding only	34834024	15	52	4.306135e-07	1.492793e-06
TCGA-A4-7828-01A-11D-2136-08	70	70	0	54	0	0	coding only	34834024	15	49	4.306135e-07	1.406671e-06
TCGA-A4-7915-01A-11D-2201-08	53	53	0	41	0	0	coding only	34834024	12	39	3.444908e-07	1.119595e-06
TCGA-A4-7996-01A-11D-2201-08	108	108	0	81	0	0	coding only	34834024	25	79	7.176891e-07	2.267898e-06
TCGA-A4-7997-01A-11D-2201-08	101	100	1	76	9.900990e-03	0	coding only	34834024	24	75	6.889816e-07	2.153067e-06
TCGA-A4-8098-01A-11D-2396-08	148	147	1	110	6.756757e-03	0	coding only	34834024	34	104	9.760572e-07	2.985587e-06
TCGA-A4-8310-01A-11D-2396-08	114	114	0	86	0	0	coding only	34834024	26	81	7.463967e-07	2.325313e-06
TCGA-A4-8311-01A-11D-2396-08	93	92	1	64	1.075269e-02	0	coding only	34834024	27	62	7.751042e-07	1.779869e-06
TCGA-A4-8312-01A-11D-2396-08	51	51	0	39	0	0	coding only	34834024	11	36	3.157832e-07	1.033472e-06
TCGA-A4-8515-01A-11D-2396-08	92	92	0	73	0	0	coding only	34834024	19	70	5.454437e-07	2.009530e-06
TCGA-A4-8517-01A-11D-2396-08	103	102	1	74	9.708738e-03	0	coding only	34834024	28	69	8.038118e-07	1.980822e-06
TCGA-A4-8518-01A-11D-2396-08	93	93	0	71	0	0	coding only	34834024	22	69	6.315664e-07	1.980822e-06
TCGA-A4-8630-01A-11D-2396-08	97	96	1	70	1.030928e-02	0	coding only	34834024	25	65	7.176891e-07	1.865992e-06
TCGA-A4-A48D-01A-11D-A25F-10	151	148	3	113	1.986755e-02	0	coding only	34834024	32	107	9.186421e-07	3.071709e-06
TCGA-A4-A4ZT-01A-11D-A26P-10	73	72	1	62	1.369863e-02	0	coding only	34834024	10	54	2.870756e-07	1.550208e-06
TCGA-A4-A57E-01A-11D-A26P-10	116	116	0	91	0	0	coding only	34834024	22	83	6.315664e-07	2.382728e-06
TCGA-A4-A5DU-01A-11D-A28G-10	56	54	2	41	3.571429e-02	0	coding only	34834024	13	37	3.731983e-07	1.062180e-06
TCGA-A4-A5XZ-01A-11D-A31X-10	91	90	1	69	1.098901e-02	0	coding only	34834024	21	61	6.028589e-07	1.751161e-06
TCGA-A4-A5Y0-01A-11D-A31X-10	86	85	1	74	1.162791e-02	0	coding only	34834024	10	72	2.870756e-07	2.066945e-06
TCGA-A4-A5Y1-01A-11D-A28G-10	113	111	2	86	1.769912e-02	0	coding only	34834024	24	79	6.889816e-07	2.267898e-06
TCGA-A4-A6HP-01A-11D-A31X-10	134	134	0	99	0	0	coding only	34834024	32	89	9.186421e-07	2.554973e-06
TCGA-AK-3425-01A-02D-1361-10	76	76	0	59	0	0	coding only	34834024	16	59	4.593210e-07	1.693746e-06
TCGA-AK-3427-01A-01D-0966-08	35	28	7	22	2.000000e-01	0	coding only	34834024	5	20	1.435378e-07	5.741513e-07
TCGA-AK-3427-01A-01W-0886-08	317	298	19	266	5.993691e-02	1	exome+100bp flanks	34834024	32	252	9.186421e-07	7.234306e-06
TCGA-AK-3428-01A-02D-1361-10	78	78	0	59	0	0	coding only	34834024	19	58	5.454437e-07	1.665039e-06
TCGA-AK-3429-01A-02D-1386-10	36	33	3	23	8.333333e-02	0	coding only	34834024	9	23	2.583681e-07	6.602740e-07
TCGA-AK-3430-01A-01D-1251-10	80	77	3	64	3.750000e-02	0	coding only	34834024	13	64	3.731983e-07	1.837284e-06
TCGA-AK-3430-01A-01W-1244-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-AK-3431-01A-02D-1361-10	74	74	0	59	0	0	coding only	34834024	14	59	4.019059e-07	1.693746e-06
TCGA-AK-3434-01A-02D-1361-10	73	72	1	54	1.369863e-02	0	coding only	34834024	18	51	5.167362e-07	1.464086e-06
TCGA-AK-3436-01A-02D-1386-10	61	58	3	46	4.918033e-02	0	coding only	34834024	12	46	3.444908e-07	1.320548e-06
TCGA-AK-3440-01A-01D-0966-08	42	32	10	27	2.380952e-01	0	coding only	34834024	5	27	1.435378e-07	7.751042e-07
TCGA-AK-3440-01A-01W-0886-08	217	204	13	185	5.990783e-02	1	exome+100bp flanks	34834024	18	174	5.167362e-07	4.995116e-06
TCGA-AK-3443-01A-01D-0966-08	25	16	9	14	3.600000e-01	0	coding only	34834024	2	12	5.741513e-08	3.444908e-07
TCGA-AK-3443-01A-01W-0886-08	124	115	9	105	7.258065e-02	1	exome+100bp flanks	34834024	9	97	2.583681e-07	2.784634e-06
TCGA-AK-3444-01A-01D-0966-08	105	105	0	83	0	0	coding only	34834024	22	81	6.315664e-07	2.325313e-06
TCGA-AK-3444-01A-01W-0886-08	416	405	11	359	2.644231e-02	0	coding only	34834024	46	340	1.320548e-06	9.760572e-06
TCGA-AK-3445-01A-02D-1361-10	115	115	0	85	0	0	coding only	34834024	28	82	8.038118e-07	2.354020e-06
TCGA-AK-3445-01A-02W-1359-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-AK-3447-01A-01W-0886-08	279	260	19	227	6.810036e-02	1	exome+100bp flanks	34834024	31	211	8.899345e-07	6.057296e-06
TCGA-AK-3450-01A-02D-1361-10	81	81	0	57	0	0	coding only	34834024	22	53	6.315664e-07	1.521501e-06
TCGA-AK-3450-01A-02W-1359-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-AK-3451-01A-02D-1251-10	94	91	3	78	3.191489e-02	0	coding only	34834024	13	77	3.731983e-07	2.210482e-06
TCGA-AK-3451-01A-02W-1244-10	2	2	0	2	0	0	coding only	34834024	0	2	0	5.741513e-08
TCGA-AK-3453-01A-01D-0966-08	40	38	2	25	5.000000e-02	0	coding only	34834024	13	23	3.731983e-07	6.602740e-07
TCGA-AK-3453-01A-01W-0886-08	185	174	11	138	5.945946e-02	1	exome+100bp flanks	34834024	34	126	9.760572e-07	3.617153e-06
TCGA-AK-3454-01A-02D-1361-10	60	59	1	41	1.666667e-02	0	coding only	34834024	18	41	5.167362e-07	1.177010e-06
TCGA-AK-3455-01A-01D-0966-08	67	67	0	57	0	0	coding only	34834024	10	55	2.870756e-07	1.578916e-06
TCGA-AK-3456-01A-02D-1386-10	49	49	0	30	0	0	coding only	34834024	18	28	5.167362e-07	8.038118e-07
TCGA-AK-3458-01A-01D-1501-10	34	33	1	27	2.941176e-02	0	coding only	34834024	6	27	1.722454e-07	7.751042e-07
TCGA-AK-3460-01A-02D-1361-10	74	72	2	56	2.702703e-02	0	coding only	34834024	16	56	4.593210e-07	1.607624e-06
TCGA-AK-3461-01A-02D-1361-10	54	54	0	40	0	0	coding only	34834024	14	40	4.019059e-07	1.148303e-06
TCGA-AK-3465-01A-01D-0966-08	38	35	3	27	7.894737e-02	0	coding only	34834024	7	25	2.009530e-07	7.176891e-07
TCGA-AK-3465-01A-01W-0886-08	249	234	15	207	6.024096e-02	1	exome+100bp flanks	34834024	26	197	7.463967e-07	5.655390e-06
TCGA-AL-3466-01A-01D-1252-08	82	82	0	62	0	0	coding only	34834024	16	58	4.593210e-07	1.665039e-06
TCGA-AL-3467-01A-01D-1252-08	43	43	0	34	0	0	coding only	34834024	9	31	2.583681e-07	8.899345e-07
TCGA-AL-3472-01A-01D-1252-08	90	90	0	68	0	0	coding only	34834024	21	66	6.028589e-07	1.894699e-06
TCGA-AL-3473-01A-01D-1252-08	96	96	0	74	0	0	coding only	34834024	22	69	6.315664e-07	1.980822e-06
TCGA-AL-7173-01A-11D-2136-08	85	84	1	67	1.176471e-02	0	coding only	34834024	15	65	4.306135e-07	1.865992e-06
TCGA-AS-3777-01A-01D-0966-08	46	40	6	33	1.304348e-01	0	coding only	34834024	7	30	2.009530e-07	8.612269e-07
TCGA-AS-3777-01A-01W-0886-08	251	236	15	203	5.976096e-02	1	exome+100bp flanks	34834024	29	195	8.325194e-07	5.597975e-06
TCGA-AS-3778-01A-01D-0966-08	70	70	0	56	0	0	coding only	34834024	12	55	3.444908e-07	1.578916e-06
TCGA-AS-3778-01A-01W-0886-08	435	413	22	387	5.057471e-02	1	exome+100bp flanks	34834024	25	371	7.176891e-07	1.065051e-05
TCGA-AT-A5NU-01A-11D-A28G-10	110	109	1	85	9.090909e-03	0	coding only	34834024	22	78	6.315664e-07	2.239190e-06
TCGA-B0-4690-01A-01D-1361-10	72	72	0	63	0	0	coding only	34834024	9	62	2.583681e-07	1.779869e-06
TCGA-B0-4690-01A-01W-1359-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-4691-01A-01D-1361-10	109	109	0	81	0	0	coding only	34834024	28	81	8.038118e-07	2.325313e-06
TCGA-B0-4693-01A-01D-1361-10	101	101	0	76	0	0	coding only	34834024	25	75	7.176891e-07	2.153067e-06
TCGA-B0-4694-01A-01D-1361-10	77	77	0	51	0	0	coding only	34834024	26	51	7.463967e-07	1.464086e-06
TCGA-B0-4697-01A-01D-1361-10	42	42	0	21	0	0	coding only	34834024	21	21	6.028589e-07	6.028589e-07
TCGA-B0-4700-01A-02D-1534-10	30	28	2	21	6.666667e-02	0	coding only	34834024	6	20	1.722454e-07	5.741513e-07
TCGA-B0-4703-01A-01D-1361-10	43	43	0	38	0	0	coding only	34834024	5	38	1.435378e-07	1.090887e-06
TCGA-B0-4703-01A-01W-1359-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-4706-01A-01D-1501-10	56	54	2	43	3.571429e-02	0	coding only	34834024	10	41	2.870756e-07	1.177010e-06
TCGA-B0-4707-01A-01D-1361-10	106	106	0	75	0	0	coding only	34834024	31	73	8.899345e-07	2.095652e-06
TCGA-B0-4707-01A-01W-1359-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-4710-01A-01D-1501-10	89	88	1	72	1.123596e-02	0	coding only	34834024	15	72	4.306135e-07	2.066945e-06
TCGA-B0-4710-01A-01W-1528-10	2	2	0	2	0	0	coding only	34834024	0	2	0	5.741513e-08
TCGA-B0-4712-01A-01D-1501-10	109	107	2	87	1.834862e-02	0	coding only	34834024	18	85	5.167362e-07	2.440143e-06
TCGA-B0-4713-01A-01D-1361-10	73	70	3	55	4.109589e-02	0	coding only	34834024	14	53	4.019059e-07	1.521501e-06
TCGA-B0-4714-01A-01D-1361-10	82	81	1	63	1.219512e-02	0	coding only	34834024	17	62	4.880286e-07	1.779869e-06
TCGA-B0-4714-01A-01W-1359-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-4718-01A-01D-1361-10	74	73	1	56	1.351351e-02	0	coding only	34834024	17	55	4.880286e-07	1.578916e-06
TCGA-B0-4810-01A-01D-1501-10	65	65	0	57	0	0	coding only	34834024	7	54	2.009530e-07	1.550208e-06
TCGA-B0-4811-01A-01D-1501-10	123	121	2	91	1.626016e-02	0	coding only	34834024	28	89	8.038118e-07	2.554973e-06
TCGA-B0-4813-01A-01D-1361-10	58	58	0	42	0	0	coding only	34834024	15	41	4.306135e-07	1.177010e-06
TCGA-B0-4814-01A-01D-1361-10	68	68	0	50	0	0	coding only	34834024	17	49	4.880286e-07	1.406671e-06
TCGA-B0-4815-01A-01D-1501-10	77	74	3	54	3.896104e-02	0	coding only	34834024	20	52	5.741513e-07	1.492793e-06
TCGA-B0-4816-01A-01D-1501-10	61	60	1	52	1.639344e-02	0	coding only	34834024	8	52	2.296605e-07	1.492793e-06
TCGA-B0-4816-01A-01W-1528-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-4817-01A-01D-1361-10	59	59	0	40	0	0	coding only	34834024	19	40	5.454437e-07	1.148303e-06
TCGA-B0-4818-01A-01D-1501-10	81	79	2	63	2.469136e-02	0	coding only	34834024	15	59	4.306135e-07	1.693746e-06
TCGA-B0-4819-01A-01D-1361-10	45	45	0	33	0	0	coding only	34834024	12	32	3.444908e-07	9.186421e-07
TCGA-B0-4822-01A-01D-1361-10	73	73	0	59	0	0	coding only	34834024	14	58	4.019059e-07	1.665039e-06
TCGA-B0-4822-01A-01W-1359-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-4823-01A-02D-1421-08	121	120	1	91	8.264463e-03	0	coding only	34834024	29	91	8.325194e-07	2.612388e-06
TCGA-B0-4824-01A-01D-1361-10	110	109	1	86	9.090909e-03	0	coding only	34834024	22	84	6.315664e-07	2.411435e-06
TCGA-B0-4824-01A-01W-1359-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-4827-01A-02D-1421-08	94	92	2	72	2.127660e-02	0	coding only	34834024	20	70	5.741513e-07	2.009530e-06
TCGA-B0-4828-01A-01D-1361-10	104	104	0	81	0	0	coding only	34834024	23	78	6.602740e-07	2.239190e-06
TCGA-B0-4833-01A-01D-1373-10	63	63	0	48	0	0	coding only	34834024	15	47	4.306135e-07	1.349256e-06
TCGA-B0-4833-01A-01W-1369-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-4836-01A-01D-1373-10	27	27	0	18	0	0	coding only	34834024	9	17	2.583681e-07	4.880286e-07
TCGA-B0-4837-01A-01D-1373-10	47	47	0	37	0	0	coding only	34834024	10	36	2.870756e-07	1.033472e-06
TCGA-B0-4838-01A-01D-1373-10	47	47	0	39	0	0	coding only	34834024	7	38	2.009530e-07	1.090887e-06
TCGA-B0-4839-01A-01D-1373-10	67	66	1	47	1.492537e-02	0	coding only	34834024	19	46	5.454437e-07	1.320548e-06
TCGA-B0-4841-01A-01D-1361-10	104	103	1	70	9.615385e-03	0	coding only	34834024	32	70	9.186421e-07	2.009530e-06
TCGA-B0-4842-01A-02D-1421-08	58	58	0	49	0	0	coding only	34834024	9	48	2.583681e-07	1.377963e-06
TCGA-B0-4843-01A-01D-1361-10	76	75	1	55	1.315789e-02	0	coding only	34834024	20	55	5.741513e-07	1.578916e-06
TCGA-B0-4844-01A-01D-1361-10	51	50	1	37	1.960784e-02	0	coding only	34834024	13	36	3.731983e-07	1.033472e-06
TCGA-B0-4845-01A-01D-1361-10	55	55	0	40	0	0	coding only	34834024	13	39	3.731983e-07	1.119595e-06
TCGA-B0-4845-01A-01W-1359-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-4846-01A-01D-1361-10	46	46	0	29	0	0	coding only	34834024	15	29	4.306135e-07	8.325194e-07
TCGA-B0-4847-01A-01D-1361-10	46	46	0	39	0	0	coding only	34834024	7	39	2.009530e-07	1.119595e-06
TCGA-B0-4848-01A-01D-1361-10	41	41	0	34	0	0	coding only	34834024	7	33	2.009530e-07	9.473496e-07
TCGA-B0-4848-01A-01W-1359-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-4849-01A-01D-1361-10	25	25	0	18	0	0	coding only	34834024	7	18	2.009530e-07	5.167362e-07
TCGA-B0-4852-01A-01D-1501-10	85	80	5	65	5.882353e-02	0	coding only	34834024	13	65	3.731983e-07	1.865992e-06
TCGA-B0-4945-01A-01D-1421-08	42	42	0	38	0	0	coding only	34834024	3	35	8.612269e-08	1.004765e-06
TCGA-B0-5075-01A-01D-1392-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-5075-01A-01D-1462-08	105	103	2	82	1.904762e-02	0	coding only	34834024	21	82	6.028589e-07	2.354020e-06
TCGA-B0-5077-01A-01D-1462-08	61	61	0	48	0	0	coding only	34834024	13	48	3.731983e-07	1.377963e-06
TCGA-B0-5080-01A-01D-1501-10	69	64	5	49	7.246377e-02	0	coding only	34834024	15	49	4.306135e-07	1.406671e-06
TCGA-B0-5081-01A-01D-1462-08	48	47	1	35	2.083333e-02	0	coding only	34834024	12	35	3.444908e-07	1.004765e-06
TCGA-B0-5083-01A-02D-1421-08	68	64	4	50	5.882353e-02	0	coding only	34834024	14	48	4.019059e-07	1.377963e-06
TCGA-B0-5084-01A-01D-1462-08	63	58	5	48	7.936508e-02	0	coding only	34834024	10	47	2.870756e-07	1.349256e-06
TCGA-B0-5085-01A-01D-1462-08	78	77	1	62	1.282051e-02	0	coding only	34834024	15	61	4.306135e-07	1.751161e-06
TCGA-B0-5088-01A-01D-1462-08	71	68	3	48	4.225352e-02	0	coding only	34834024	20	48	5.741513e-07	1.377963e-06
TCGA-B0-5092-01A-01D-1421-08	74	74	0	56	0	0	coding only	34834024	16	56	4.593210e-07	1.607624e-06
TCGA-B0-5094-01A-01D-1421-08	86	84	2	70	2.325581e-02	0	coding only	34834024	14	70	4.019059e-07	2.009530e-06
TCGA-B0-5095-01A-01D-1421-08	84	82	2	66	2.380952e-02	0	coding only	34834024	16	63	4.593210e-07	1.808577e-06
TCGA-B0-5096-01A-01D-1421-08	105	103	2	71	1.904762e-02	0	coding only	34834024	30	71	8.612269e-07	2.038237e-06
TCGA-B0-5097-01A-01D-1421-08	68	65	3	51	4.411765e-02	0	coding only	34834024	13	49	3.731983e-07	1.406671e-06
TCGA-B0-5098-01A-01D-1421-08	841	818	23	638	2.734839e-02	0	coding only	34834024	175	612	5.023824e-06	1.756903e-05
TCGA-B0-5099-01A-01D-1421-08	80	75	5	66	6.250000e-02	0	coding only	34834024	9	63	2.583681e-07	1.808577e-06
TCGA-B0-5100-01A-01D-1421-08	37	37	0	27	0	0	coding only	34834024	10	26	2.870756e-07	7.463967e-07
TCGA-B0-5102-01A-01D-1421-08	52	52	0	44	0	0	coding only	34834024	8	44	2.296605e-07	1.263133e-06
TCGA-B0-5104-01A-01D-1421-08	68	67	1	48	1.470588e-02	0	coding only	34834024	19	48	5.454437e-07	1.377963e-06
TCGA-B0-5104-01A-01W-1475-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-5106-01A-01D-1421-08	94	93	1	73	1.063830e-02	0	coding only	34834024	19	71	5.454437e-07	2.038237e-06
TCGA-B0-5107-01A-01D-1421-08	62	62	0	52	0	0	coding only	34834024	10	51	2.870756e-07	1.464086e-06
TCGA-B0-5107-01A-01W-1475-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-5108-01A-01D-1421-08	57	54	3	41	5.263158e-02	0	coding only	34834024	13	41	3.731983e-07	1.177010e-06
TCGA-B0-5109-01A-02D-1421-08	56	53	3	44	5.357143e-02	0	coding only	34834024	9	44	2.583681e-07	1.263133e-06
TCGA-B0-5110-01A-01D-1421-08	74	74	0	56	0	0	coding only	34834024	16	56	4.593210e-07	1.607624e-06
TCGA-B0-5110-01A-01W-1475-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-5113-01A-01D-1421-08	42	39	3	30	7.142857e-02	0	coding only	34834024	9	30	2.583681e-07	8.612269e-07
TCGA-B0-5115-01A-01D-1421-08	63	62	1	55	1.587302e-02	0	coding only	34834024	7	54	2.009530e-07	1.550208e-06
TCGA-B0-5116-01A-02D-1421-08	66	65	1	50	1.515152e-02	0	coding only	34834024	14	50	4.019059e-07	1.435378e-06
TCGA-B0-5116-01A-02W-1475-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-5117-01A-01D-1421-08	49	42	7	28	1.428571e-01	0	coding only	34834024	13	28	3.731983e-07	8.038118e-07
TCGA-B0-5119-01A-02D-1421-08	96	92	4	77	4.166667e-02	0	coding only	34834024	14	72	4.019059e-07	2.066945e-06
TCGA-B0-5120-01A-01D-1421-08	64	61	3	41	4.687500e-02	0	coding only	34834024	19	41	5.454437e-07	1.177010e-06
TCGA-B0-5121-01A-02D-1421-08	56	53	3	37	5.357143e-02	0	coding only	34834024	16	37	4.593210e-07	1.062180e-06
TCGA-B0-5399-01A-01D-1501-10	52	48	4	38	7.692308e-02	0	coding only	34834024	9	37	2.583681e-07	1.062180e-06
TCGA-B0-5399-01A-01W-1528-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-5400-01A-01D-1501-10	45	43	2	30	4.444444e-02	0	coding only	34834024	12	29	3.444908e-07	8.325194e-07
TCGA-B0-5402-01A-01D-1501-10	59	56	3	53	5.084746e-02	0	coding only	34834024	3	50	8.612269e-08	1.435378e-06
TCGA-B0-5691-01A-11D-1534-10	67	66	1	54	1.492537e-02	0	coding only	34834024	11	54	3.157832e-07	1.550208e-06
TCGA-B0-5692-01A-11D-1534-10	80	76	4	55	5.000000e-02	0	coding only	34834024	21	50	6.028589e-07	1.435378e-06
TCGA-B0-5693-01A-11D-1534-10	45	42	3	35	6.666667e-02	0	coding only	34834024	7	34	2.009530e-07	9.760572e-07
TCGA-B0-5694-01A-11D-1534-10	67	66	1	55	1.492537e-02	0	coding only	34834024	11	53	3.157832e-07	1.521501e-06
TCGA-B0-5695-01A-11D-1534-10	72	71	1	56	1.388889e-02	0	coding only	34834024	13	52	3.731983e-07	1.492793e-06
TCGA-B0-5695-01A-11W-1584-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B0-5696-01A-11D-1534-10	67	64	3	50	4.477612e-02	0	coding only	34834024	14	47	4.019059e-07	1.349256e-06
TCGA-B0-5697-01A-11D-1534-10	76	71	5	54	6.578947e-02	0	coding only	34834024	17	50	4.880286e-07	1.435378e-06
TCGA-B0-5698-01A-11D-1669-08	80	77	3	64	3.750000e-02	0	coding only	34834024	12	62	3.444908e-07	1.779869e-06
TCGA-B0-5699-01A-11D-1534-10	52	51	1	38	1.923077e-02	0	coding only	34834024	13	36	3.731983e-07	1.033472e-06
TCGA-B0-5699-01A-11W-1584-10	2	2	0	2	0	0	coding only	34834024	0	2	0	5.741513e-08
TCGA-B0-5701-01A-11D-1534-10	122	120	2	96	1.639344e-02	0	coding only	34834024	24	94	6.889816e-07	2.698511e-06
TCGA-B0-5702-01A-11D-1534-10	69	66	3	52	4.347826e-02	0	coding only	34834024	13	52	3.731983e-07	1.492793e-06
TCGA-B0-5703-01A-11D-1534-10	92	87	5	71	5.434783e-02	0	coding only	34834024	15	64	4.306135e-07	1.837284e-06
TCGA-B0-5705-01A-11D-1534-10	90	88	2	67	2.222222e-02	0	coding only	34834024	21	65	6.028589e-07	1.865992e-06
TCGA-B0-5706-01A-11D-1534-10	62	62	0	47	0	0	coding only	34834024	14	45	4.019059e-07	1.291840e-06
TCGA-B0-5707-01A-11D-1534-10	48	47	1	33	2.083333e-02	0	coding only	34834024	14	31	4.019059e-07	8.899345e-07
TCGA-B0-5709-01A-11D-1534-10	75	74	1	55	1.333333e-02	0	coding only	34834024	19	52	5.454437e-07	1.492793e-06
TCGA-B0-5710-01A-11D-1669-08	41	41	0	32	0	0	coding only	34834024	9	32	2.583681e-07	9.186421e-07
TCGA-B0-5711-01A-11D-1669-08	34	34	0	31	0	0	coding only	34834024	3	27	8.612269e-08	7.751042e-07
TCGA-B0-5712-01A-11D-1669-08	124	117	7	95	5.645161e-02	1	exome+100bp flanks	34834024	21	90	6.028589e-07	2.583681e-06
TCGA-B0-5713-01A-11D-1669-08	110	108	2	89	1.818182e-02	0	coding only	34834024	19	86	5.454437e-07	2.468851e-06
TCGA-B0-5812-01A-11D-1669-08	45	44	1	35	2.222222e-02	0	coding only	34834024	9	35	2.583681e-07	1.004765e-06
TCGA-B1-5398-01A-02D-1589-08	141	140	1	98	7.092199e-03	0	coding only	34834024	40	97	1.148303e-06	2.784634e-06
TCGA-B1-A47M-01A-11D-A25F-10	123	123	0	95	0	0	coding only	34834024	28	90	8.038118e-07	2.583681e-06
TCGA-B1-A47N-01A-11D-A25F-10	60	58	2	41	3.333333e-02	0	coding only	34834024	16	36	4.593210e-07	1.033472e-06
TCGA-B1-A654-01A-11D-A31X-10	89	88	1	70	1.123596e-02	0	coding only	34834024	16	67	4.593210e-07	1.923407e-06
TCGA-B1-A655-01A-11D-A31Z-10	124	122	2	92	1.612903e-02	0	coding only	34834024	28	83	8.038118e-07	2.382728e-06
TCGA-B1-A656-01A-11D-A31X-10	166	165	1	130	6.024096e-03	0	coding only	34834024	34	127	9.760572e-07	3.645861e-06
TCGA-B1-A657-01A-11D-A31X-10	112	112	0	82	0	0	coding only	34834024	27	74	7.751042e-07	2.124360e-06
TCGA-B2-3923-01A-01D-1458-08	25	22	3	18	1.200000e-01	0	coding only	34834024	4	18	1.148303e-07	5.167362e-07
TCGA-B2-3924-01A-01D-1458-08	22	22	0	17	0	0	coding only	34834024	5	17	1.435378e-07	4.880286e-07
TCGA-B2-3924-01A-02D-1386-10	76	73	3	54	3.947368e-02	0	coding only	34834024	19	51	5.454437e-07	1.464086e-06
TCGA-B2-4098-01A-01D-1458-08	34	33	1	24	2.941176e-02	0	coding only	34834024	9	24	2.583681e-07	6.889816e-07
TCGA-B2-4098-01A-02D-1386-10	54	53	1	38	1.851852e-02	0	coding only	34834024	15	37	4.306135e-07	1.062180e-06
TCGA-B2-4099-01A-02D-1251-10	74	70	4	52	5.405405e-02	0	coding only	34834024	17	47	4.880286e-07	1.349256e-06
TCGA-B2-4099-01A-02D-1458-08	13	13	0	11	0	0	coding only	34834024	2	11	5.741513e-08	3.157832e-07
TCGA-B2-4101-01A-02D-1361-10	51	51	0	41	0	0	coding only	34834024	10	41	2.870756e-07	1.177010e-06
TCGA-B2-4101-01A-02D-1458-08	39	39	0	33	0	0	coding only	34834024	6	33	1.722454e-07	9.473496e-07
TCGA-B2-5633-01A-01D-1534-10	56	49	7	39	1.250000e-01	0	coding only	34834024	10	38	2.870756e-07	1.090887e-06
TCGA-B2-5635-01A-01D-1534-10	67	64	3	48	4.477612e-02	0	coding only	34834024	14	47	4.019059e-07	1.349256e-06
TCGA-B2-5641-01A-01D-1534-10	77	75	2	55	2.597403e-02	0	coding only	34834024	19	54	5.454437e-07	1.550208e-06
TCGA-B3-3925-01A-01D-1458-08	92	88	4	67	4.347826e-02	0	coding only	34834024	20	63	5.741513e-07	1.808577e-06
TCGA-B3-3926-01A-01D-1252-08	35	35	0	27	0	0	coding only	34834024	8	25	2.296605e-07	7.176891e-07
TCGA-B3-4103-01A-01D-1458-08	83	83	0	65	0	0	coding only	34834024	18	64	5.167362e-07	1.837284e-06
TCGA-B3-4104-01A-01D-1458-08	122	121	1	90	8.196721e-03	0	coding only	34834024	31	90	8.899345e-07	2.583681e-06
TCGA-B3-8121-01A-21D-2396-08	69	69	0	50	0	0	coding only	34834024	18	50	5.167362e-07	1.435378e-06
TCGA-B4-5377-01A-01D-1501-10	55	51	4	38	7.272727e-02	0	coding only	34834024	12	37	3.444908e-07	1.062180e-06
TCGA-B4-5832-01A-11D-1669-08	95	90	5	69	5.263158e-02	0	coding only	34834024	19	68	5.454437e-07	1.952114e-06
TCGA-B4-5834-01A-11D-1669-08	39	36	3	23	7.692308e-02	0	coding only	34834024	11	22	3.157832e-07	6.315664e-07
TCGA-B4-5835-01A-11D-1669-08	90	88	2	77	2.222222e-02	0	coding only	34834024	9	75	2.583681e-07	2.153067e-06
TCGA-B4-5836-01A-11D-1669-08	110	109	1	80	9.090909e-03	0	coding only	34834024	28	77	8.038118e-07	2.210482e-06
TCGA-B4-5838-01A-11D-1669-08	85	83	2	66	2.352941e-02	0	coding only	34834024	17	62	4.880286e-07	1.779869e-06
TCGA-B4-5843-01A-11D-1669-08	63	60	3	52	4.761905e-02	0	coding only	34834024	8	47	2.296605e-07	1.349256e-06
TCGA-B4-5844-01A-11D-1669-08	84	83	1	70	1.190476e-02	0	coding only	34834024	13	68	3.731983e-07	1.952114e-06
TCGA-B8-4143-01A-01D-1806-10	94	91	3	67	3.191489e-02	0	coding only	34834024	24	61	6.889816e-07	1.751161e-06
TCGA-B8-4146-01B-11D-1669-08	43	43	0	33	0	0	coding only	34834024	10	33	2.870756e-07	9.473496e-07
TCGA-B8-4148-01A-02D-1386-10	44	41	3	35	6.818182e-02	0	coding only	34834024	6	34	1.722454e-07	9.760572e-07
TCGA-B8-4151-01A-01D-1806-10	64	63	1	51	1.562500e-02	0	coding only	34834024	12	49	3.444908e-07	1.406671e-06
TCGA-B8-4153-01B-11D-1669-08	72	69	3	54	4.166667e-02	0	coding only	34834024	14	53	4.019059e-07	1.521501e-06
TCGA-B8-4154-01A-01D-1251-10	63	58	5	45	7.936508e-02	0	coding only	34834024	11	42	3.157832e-07	1.205718e-06
TCGA-B8-4619-01A-02D-1553-08	26	25	1	24	3.846154e-02	0	coding only	34834024	1	23	2.870756e-08	6.602740e-07
TCGA-B8-4620-01A-01D-1553-08	23	23	0	19	0	0	coding only	34834024	3	18	8.612269e-08	5.167362e-07
TCGA-B8-4620-01A-02D-1386-10	52	52	0	48	0	0	coding only	34834024	4	45	1.148303e-07	1.291840e-06
TCGA-B8-4621-01A-01D-1501-10	100	97	3	80	3.000000e-02	0	coding only	34834024	17	75	4.880286e-07	2.153067e-06
TCGA-B8-4621-01A-01D-2102-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B8-4622-01A-02D-1361-10	102	102	0	70	0	0	coding only	34834024	31	69	8.899345e-07	1.980822e-06
TCGA-B8-4622-01A-02D-1553-08	35	34	1	28	2.857143e-02	0	coding only	34834024	6	28	1.722454e-07	8.038118e-07
TCGA-B8-5158-01A-01D-1421-08	67	65	2	52	2.985075e-02	0	coding only	34834024	13	52	3.731983e-07	1.492793e-06
TCGA-B8-5159-01A-01D-1421-08	61	60	1	50	1.639344e-02	0	coding only	34834024	10	50	2.870756e-07	1.435378e-06
TCGA-B8-5162-01A-01D-1421-08	116	110	6	88	5.172414e-02	1	exome+100bp flanks	34834024	20	83	5.741513e-07	2.382728e-06
TCGA-B8-5163-01A-01D-1421-08	76	75	1	57	1.315789e-02	0	coding only	34834024	17	57	4.880286e-07	1.636331e-06
TCGA-B8-5164-01A-01D-1421-08	89	89	0	71	0	0	coding only	34834024	18	70	5.167362e-07	2.009530e-06
TCGA-B8-5164-01A-01D-2099-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B8-5165-01A-01D-1421-08	21	21	0	15	0	0	coding only	34834024	6	15	1.722454e-07	4.306135e-07
TCGA-B8-5545-01A-01D-1669-08	29	27	2	20	6.896552e-02	0	coding only	34834024	7	20	2.009530e-07	5.741513e-07
TCGA-B8-5546-01A-01D-1534-10	18	17	1	14	5.555556e-02	0	coding only	34834024	3	14	8.612269e-08	4.019059e-07
TCGA-B8-5549-01A-01D-1534-10	77	75	2	56	2.597403e-02	0	coding only	34834024	19	53	5.454437e-07	1.521501e-06
TCGA-B8-5550-01A-01D-1534-10	94	94	0	70	0	0	coding only	34834024	22	69	6.315664e-07	1.980822e-06
TCGA-B8-5550-01A-01W-1584-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-B8-5551-01A-01D-1534-10	55	54	1	41	1.818182e-02	0	coding only	34834024	13	39	3.731983e-07	1.119595e-06
TCGA-B8-5552-01B-11D-1669-08	35	34	1	30	2.857143e-02	0	coding only	34834024	4	29	1.148303e-07	8.325194e-07
TCGA-B8-5553-01A-01D-1534-10	48	48	0	41	0	0	coding only	34834024	7	41	2.009530e-07	1.177010e-06
TCGA-B9-4113-01A-01D-1252-08	102	102	0	80	0	0	coding only	34834024	22	77	6.315664e-07	2.210482e-06
TCGA-B9-4114-01A-01D-1252-08	133	130	3	104	2.255639e-02	0	coding only	34834024	24	100	6.889816e-07	2.870756e-06
TCGA-B9-4115-01A-01D-1252-08	97	97	0	64	0	0	coding only	34834024	32	59	9.186421e-07	1.693746e-06
TCGA-B9-4116-01A-01D-1252-08	130	130	0	100	0	0	coding only	34834024	29	98	8.325194e-07	2.813341e-06
TCGA-B9-4117-01A-01D-1252-08	298	295	3	239	1.006711e-02	0	coding only	34834024	54	227	1.550208e-06	6.516617e-06
TCGA-B9-5156-01A-01D-1589-08	110	109	1	88	9.090909e-03	0	coding only	34834024	20	84	5.741513e-07	2.411435e-06
TCGA-B9-7268-01A-11D-2136-08	76	75	1	53	1.315789e-02	0	coding only	34834024	20	53	5.741513e-07	1.521501e-06
TCGA-B9-A44B-01A-11D-A25F-10	183	179	4	141	2.185792e-02	0	coding only	34834024	35	128	1.004765e-06	3.674568e-06
TCGA-B9-A5W7-01A-11D-A31X-10	40	39	1	31	2.500000e-02	0	coding only	34834024	7	28	2.009530e-07	8.038118e-07
TCGA-B9-A5W8-01A-11D-A28G-10	96	96	0	65	0	0	coding only	34834024	31	62	8.899345e-07	1.779869e-06
TCGA-B9-A5W9-01A-11D-A28G-10	97	94	3	74	3.092784e-02	0	coding only	34834024	14	66	4.019059e-07	1.894699e-06
TCGA-B9-A69E-01A-11D-A31X-10	108	106	2	84	1.851852e-02	0	coding only	34834024	22	77	6.315664e-07	2.210482e-06
TCGA-BP-4158-01A-02D-1366-10	60	59	1	34	1.666667e-02	0	coding only	34834024	25	34	7.176891e-07	9.760572e-07
TCGA-BP-4159-01A-02D-1366-10	71	71	0	54	0	0	coding only	34834024	17	52	4.880286e-07	1.492793e-06
TCGA-BP-4160-01A-02D-1366-10	65	65	0	47	0	0	coding only	34834024	18	46	5.167362e-07	1.320548e-06
TCGA-BP-4161-01A-02D-1386-10	77	74	3	57	3.896104e-02	0	coding only	34834024	17	55	4.880286e-07	1.578916e-06
TCGA-BP-4161-01A-02W-1382-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4162-01A-02D-1386-10	49	46	3	37	6.122449e-02	0	coding only	34834024	8	35	2.296605e-07	1.004765e-06
TCGA-BP-4162-01A-02W-1382-10	2	2	0	2	0	0	coding only	34834024	0	2	0	5.741513e-08
TCGA-BP-4163-01A-02D-1386-10	58	57	1	43	1.724138e-02	0	coding only	34834024	14	39	4.019059e-07	1.119595e-06
TCGA-BP-4163-01A-02W-1382-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4164-01A-02D-1386-10	62	57	5	41	8.064516e-02	0	coding only	34834024	15	41	4.306135e-07	1.177010e-06
TCGA-BP-4164-01A-02W-1382-10	4	4	0	4	0	0	coding only	34834024	0	4	0	1.148303e-07
TCGA-BP-4165-01A-02D-1366-10	104	104	0	77	0	0	coding only	34834024	27	77	7.751042e-07	2.210482e-06
TCGA-BP-4165-01A-02W-1362-10	2	2	0	2	0	0	coding only	34834024	0	2	0	5.741513e-08
TCGA-BP-4166-01A-02D-1366-10	72	72	0	57	0	0	coding only	34834024	15	57	4.306135e-07	1.636331e-06
TCGA-BP-4166-01A-02W-1362-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4167-01A-02D-1386-10	66	63	3	43	4.545455e-02	0	coding only	34834024	17	41	4.880286e-07	1.177010e-06
TCGA-BP-4169-01A-02D-1366-10	49	49	0	38	0	0	coding only	34834024	11	36	3.157832e-07	1.033472e-06
TCGA-BP-4170-01A-02D-1366-10	53	53	0	40	0	0	coding only	34834024	12	40	3.444908e-07	1.148303e-06
TCGA-BP-4173-01A-02D-1366-10	16	16	0	7	0	0	coding only	34834024	9	7	2.583681e-07	2.009530e-07
TCGA-BP-4174-01A-02D-1366-10	42	42	0	31	0	0	coding only	34834024	11	30	3.157832e-07	8.612269e-07
TCGA-BP-4176-01A-02D-1366-10	97	97	0	77	0	0	coding only	34834024	17	73	4.880286e-07	2.095652e-06
TCGA-BP-4177-01A-02D-1421-08	25	22	3	15	1.200000e-01	0	coding only	34834024	7	13	2.009530e-07	3.731983e-07
TCGA-BP-4326-01A-01D-1366-10	63	63	0	51	0	0	coding only	34834024	10	49	2.870756e-07	1.406671e-06
TCGA-BP-4329-01A-02D-1366-10	50	50	0	44	0	0	coding only	34834024	6	44	1.722454e-07	1.263133e-06
TCGA-BP-4330-01A-01D-1366-10	49	49	0	35	0	0	coding only	34834024	14	35	4.019059e-07	1.004765e-06
TCGA-BP-4331-01A-01D-1366-10	49	49	0	35	0	0	coding only	34834024	14	35	4.019059e-07	1.004765e-06
TCGA-BP-4337-01A-01D-1366-10	40	40	0	30	0	0	coding only	34834024	10	29	2.870756e-07	8.325194e-07
TCGA-BP-4338-01A-01D-1806-10	64	64	0	51	0	0	coding only	34834024	13	48	3.731983e-07	1.377963e-06
TCGA-BP-4340-01A-01D-1366-10	46	46	0	38	0	0	coding only	34834024	8	38	2.296605e-07	1.090887e-06
TCGA-BP-4340-01A-01W-1362-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4341-01A-01D-1366-10	52	52	0	40	0	0	coding only	34834024	12	40	3.444908e-07	1.148303e-06
TCGA-BP-4342-01A-01D-1366-10	44	44	0	33	0	0	coding only	34834024	11	33	3.157832e-07	9.473496e-07
TCGA-BP-4342-01A-01W-1362-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4343-01A-02D-1366-10	35	35	0	20	0	0	coding only	34834024	15	19	4.306135e-07	5.454437e-07
TCGA-BP-4345-01A-01D-1366-10	20	19	1	16	5.000000e-02	0	coding only	34834024	3	16	8.612269e-08	4.593210e-07
TCGA-BP-4346-01A-01D-1366-10	47	47	0	35	0	0	coding only	34834024	12	34	3.444908e-07	9.760572e-07
TCGA-BP-4347-01A-01D-1366-10	41	41	0	33	0	0	coding only	34834024	7	31	2.009530e-07	8.899345e-07
TCGA-BP-4349-01A-01D-1366-10	39	39	0	29	0	0	coding only	34834024	10	28	2.870756e-07	8.038118e-07
TCGA-BP-4349-01A-01W-1362-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4351-01A-01D-1366-10	66	66	0	49	0	0	coding only	34834024	17	48	4.880286e-07	1.377963e-06
TCGA-BP-4352-01A-01D-1366-10	95	95	0	82	0	0	coding only	34834024	12	81	3.444908e-07	2.325313e-06
TCGA-BP-4354-01A-02D-1366-10	31	31	0	21	0	0	coding only	34834024	10	21	2.870756e-07	6.028589e-07
TCGA-BP-4355-01A-01D-1366-10	17	17	0	12	0	0	coding only	34834024	5	11	1.435378e-07	3.157832e-07
TCGA-BP-4355-01A-01W-1362-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4756-01A-01D-1366-10	49	49	0	36	0	0	coding only	34834024	13	36	3.731983e-07	1.033472e-06
TCGA-BP-4758-01A-01D-1366-10	37	37	0	30	0	0	coding only	34834024	7	30	2.009530e-07	8.612269e-07
TCGA-BP-4758-01A-01W-1362-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4759-01A-01D-1366-10	90	90	0	63	0	0	coding only	34834024	27	63	7.751042e-07	1.808577e-06
TCGA-BP-4759-01A-01W-1362-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4760-01A-02D-1421-08	44	40	4	25	9.090909e-02	0	coding only	34834024	14	25	4.019059e-07	7.176891e-07
TCGA-BP-4761-01A-01D-1366-10	86	86	0	63	0	0	coding only	34834024	23	63	6.602740e-07	1.808577e-06
TCGA-BP-4762-01A-02D-1366-10	88	88	0	65	0	0	coding only	34834024	23	63	6.602740e-07	1.808577e-06
TCGA-BP-4762-01A-02W-1362-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4763-01A-01D-1366-10	41	41	0	27	0	0	coding only	34834024	14	27	4.019059e-07	7.751042e-07
TCGA-BP-4763-01A-01W-1362-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4765-01A-01D-1366-10	29	28	1	18	3.448276e-02	0	coding only	34834024	9	18	2.583681e-07	5.167362e-07
TCGA-BP-4765-01A-01W-1362-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4766-01A-01D-1366-10	44	44	0	34	0	0	coding only	34834024	10	34	2.870756e-07	9.760572e-07
TCGA-BP-4768-01A-01D-1366-10	62	62	0	44	0	0	coding only	34834024	17	44	4.880286e-07	1.263133e-06
TCGA-BP-4770-01A-01D-1501-10	72	71	1	54	1.388889e-02	0	coding only	34834024	16	51	4.593210e-07	1.464086e-06
TCGA-BP-4771-01A-01D-1366-10	28	28	0	19	0	0	coding only	34834024	9	19	2.583681e-07	5.454437e-07
TCGA-BP-4774-01A-01D-1366-10	50	50	0	33	0	0	coding only	34834024	17	32	4.880286e-07	9.186421e-07
TCGA-BP-4775-01A-01D-1366-10	50	49	1	35	2.000000e-02	0	coding only	34834024	14	35	4.019059e-07	1.004765e-06
TCGA-BP-4777-01A-01D-1366-10	14	14	0	12	0	0	coding only	34834024	2	12	5.741513e-08	3.444908e-07
TCGA-BP-4781-01A-01D-1373-10	44	44	0	31	0	0	coding only	34834024	11	29	3.157832e-07	8.325194e-07
TCGA-BP-4782-01A-02D-1421-08	90	89	1	73	1.111111e-02	0	coding only	34834024	16	72	4.593210e-07	2.066945e-06
TCGA-BP-4782-01A-02D-2099-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4787-01A-01D-1373-10	53	53	0	39	0	0	coding only	34834024	14	38	4.019059e-07	1.090887e-06
TCGA-BP-4789-01A-01D-1373-10	37	37	0	29	0	0	coding only	34834024	8	27	2.296605e-07	7.751042e-07
TCGA-BP-4789-01A-01W-1369-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4790-01A-01D-1373-10	29	29	0	21	0	0	coding only	34834024	8	21	2.296605e-07	6.028589e-07
TCGA-BP-4795-01A-02D-1421-08	46	42	4	27	8.695652e-02	0	coding only	34834024	15	24	4.306135e-07	6.889816e-07
TCGA-BP-4797-01A-01D-1373-10	20	20	0	17	0	0	coding only	34834024	3	16	8.612269e-08	4.593210e-07
TCGA-BP-4798-01A-01D-1373-10	21	21	0	16	0	0	coding only	34834024	5	15	1.435378e-07	4.306135e-07
TCGA-BP-4798-01A-01W-1369-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4799-01A-01D-1373-10	23	23	0	16	0	0	coding only	34834024	7	15	2.009530e-07	4.306135e-07
TCGA-BP-4801-01A-02D-1421-08	69	67	2	54	2.898551e-02	0	coding only	34834024	12	54	3.444908e-07	1.550208e-06
TCGA-BP-4803-01A-01D-1373-10	65	65	0	51	0	0	coding only	34834024	14	49	4.019059e-07	1.406671e-06
TCGA-BP-4803-01A-01W-1369-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4804-01A-02D-1373-10	22	22	0	19	0	0	coding only	34834024	3	19	8.612269e-08	5.454437e-07
TCGA-BP-4807-01A-01D-1373-10	58	58	0	43	0	0	coding only	34834024	15	43	4.306135e-07	1.234425e-06
TCGA-BP-4960-01A-01D-1462-08	77	75	2	61	2.597403e-02	0	coding only	34834024	14	59	4.019059e-07	1.693746e-06
TCGA-BP-4961-01A-01D-1392-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4961-01A-01D-1462-08	38	38	0	28	0	0	coding only	34834024	10	28	2.870756e-07	8.038118e-07
TCGA-BP-4962-01A-01D-1462-08	36	35	1	32	2.777778e-02	0	coding only	34834024	3	30	8.612269e-08	8.612269e-07
TCGA-BP-4963-01A-01D-1462-08	90	90	0	65	0	0	coding only	34834024	25	64	7.176891e-07	1.837284e-06
TCGA-BP-4964-01A-01D-1462-08	97	96	1	75	1.030928e-02	0	coding only	34834024	20	73	5.741513e-07	2.095652e-06
TCGA-BP-4965-01A-01D-1462-08	73	65	8	50	1.095890e-01	0	coding only	34834024	15	48	4.306135e-07	1.377963e-06
TCGA-BP-4967-01A-01D-1462-08	80	77	3	56	3.750000e-02	0	coding only	34834024	20	56	5.741513e-07	1.607624e-06
TCGA-BP-4968-01A-01D-1462-08	50	48	2	37	4.000000e-02	0	coding only	34834024	11	36	3.157832e-07	1.033472e-06
TCGA-BP-4970-01A-01D-1462-08	39	39	0	30	0	0	coding only	34834024	9	30	2.583681e-07	8.612269e-07
TCGA-BP-4971-01A-01D-1462-08	51	50	1	33	1.960784e-02	0	coding only	34834024	17	32	4.880286e-07	9.186421e-07
TCGA-BP-4972-01A-01D-1462-08	46	46	0	32	0	0	coding only	34834024	14	32	4.019059e-07	9.186421e-07
TCGA-BP-4973-01A-01D-1462-08	37	35	2	28	5.405405e-02	0	coding only	34834024	7	28	2.009530e-07	8.038118e-07
TCGA-BP-4974-01A-01D-1392-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-4974-01A-01D-1462-08	27	27	0	23	0	0	coding only	34834024	4	22	1.148303e-07	6.315664e-07
TCGA-BP-4975-01A-01D-1462-08	24	23	1	16	4.166667e-02	0	coding only	34834024	7	16	2.009530e-07	4.593210e-07
TCGA-BP-4976-01A-01D-1462-08	105	104	1	79	9.523810e-03	0	coding only	34834024	25	77	7.176891e-07	2.210482e-06
TCGA-BP-4977-01A-01D-1462-08	47	45	2	36	4.255319e-02	0	coding only	34834024	9	36	2.583681e-07	1.033472e-06
TCGA-BP-4981-01A-01D-1462-08	60	60	0	44	0	0	coding only	34834024	16	43	4.593210e-07	1.234425e-06
TCGA-BP-4982-01A-01D-1462-08	41	40	1	30	2.439024e-02	0	coding only	34834024	10	30	2.870756e-07	8.612269e-07
TCGA-BP-4983-01A-01D-1462-08	78	76	2	54	2.564103e-02	0	coding only	34834024	22	54	6.315664e-07	1.550208e-06
TCGA-BP-4985-01A-01D-1462-08	96	94	2	71	2.083333e-02	0	coding only	34834024	23	70	6.602740e-07	2.009530e-06
TCGA-BP-4986-01A-01D-1462-08	44	44	0	35	0	0	coding only	34834024	9	34	2.583681e-07	9.760572e-07
TCGA-BP-4987-01A-01D-1462-08	25	25	0	18	0	0	coding only	34834024	7	18	2.009530e-07	5.167362e-07
TCGA-BP-4988-01A-01D-1462-08	46	46	0	35	0	0	coding only	34834024	11	33	3.157832e-07	9.473496e-07
TCGA-BP-4989-01A-01D-1462-08	78	76	2	57	2.564103e-02	0	coding only	34834024	19	57	5.454437e-07	1.636331e-06
TCGA-BP-4991-01A-01D-1462-08	50	50	0	36	0	0	coding only	34834024	14	35	4.019059e-07	1.004765e-06
TCGA-BP-4992-01A-01D-1392-10	2	2	0	2	0	0	coding only	34834024	0	2	0	5.741513e-08
TCGA-BP-4992-01A-01D-1462-08	43	42	1	33	2.325581e-02	0	coding only	34834024	9	32	2.583681e-07	9.186421e-07
TCGA-BP-4993-01A-02D-1421-08	81	79	2	58	2.469136e-02	0	coding only	34834024	20	58	5.741513e-07	1.665039e-06
TCGA-BP-4994-01A-01D-1462-08	42	39	3	22	7.142857e-02	0	coding only	34834024	17	22	4.880286e-07	6.315664e-07
TCGA-BP-4995-01A-01D-1462-08	52	52	0	35	0	0	coding only	34834024	17	35	4.880286e-07	1.004765e-06
TCGA-BP-4998-01A-01D-1462-08	38	37	1	29	2.631579e-02	0	coding only	34834024	7	29	2.009530e-07	8.325194e-07
TCGA-BP-4999-01A-01D-1462-08	59	57	2	45	3.389831e-02	0	coding only	34834024	12	44	3.444908e-07	1.263133e-06
TCGA-BP-5000-01A-01D-1462-08	45	44	1	30	2.222222e-02	0	coding only	34834024	14	30	4.019059e-07	8.612269e-07
TCGA-BP-5001-01A-01D-1392-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-5001-01A-01D-1462-08	39	39	0	28	0	0	coding only	34834024	11	28	3.157832e-07	8.038118e-07
TCGA-BP-5004-01A-01D-1462-08	51	48	3	41	5.882353e-02	0	coding only	34834024	7	41	2.009530e-07	1.177010e-06
TCGA-BP-5006-01A-01D-1462-08	44	42	2	36	4.545455e-02	0	coding only	34834024	6	36	1.722454e-07	1.033472e-06
TCGA-BP-5007-01A-01D-1392-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-5007-01A-01D-1462-08	32	32	0	27	0	0	coding only	34834024	5	26	1.435378e-07	7.463967e-07
TCGA-BP-5008-01A-01D-1392-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-5008-01A-01D-1462-08	38	38	0	31	0	0	coding only	34834024	7	31	2.009530e-07	8.899345e-07
TCGA-BP-5009-01A-01D-1462-08	50	49	1	41	2.000000e-02	0	coding only	34834024	8	41	2.296605e-07	1.177010e-06
TCGA-BP-5010-01A-02D-1421-08	69	67	2	51	2.898551e-02	0	coding only	34834024	16	50	4.593210e-07	1.435378e-06
TCGA-BP-5168-01A-01D-1421-08	134	132	2	98	1.492537e-02	0	coding only	34834024	34	97	9.760572e-07	2.784634e-06
TCGA-BP-5169-01A-01D-1429-08	66	63	3	52	4.545455e-02	0	coding only	34834024	10	50	2.870756e-07	1.435378e-06
TCGA-BP-5170-01A-01D-1429-08	46	45	1	33	2.173913e-02	0	coding only	34834024	12	32	3.444908e-07	9.186421e-07
TCGA-BP-5173-01A-01D-1429-08	99	98	1	70	1.010101e-02	0	coding only	34834024	27	68	7.751042e-07	1.952114e-06
TCGA-BP-5174-01A-01D-1429-08	40	40	0	33	0	0	coding only	34834024	6	33	1.722454e-07	9.473496e-07
TCGA-BP-5175-01A-01D-1429-08	54	53	1	37	1.851852e-02	0	coding only	34834024	16	37	4.593210e-07	1.062180e-06
TCGA-BP-5176-01A-01D-1429-08	127	126	1	99	7.874016e-03	0	coding only	34834024	27	99	7.751042e-07	2.842049e-06
TCGA-BP-5177-01A-01D-1429-08	44	42	2	32	4.545455e-02	0	coding only	34834024	10	32	2.870756e-07	9.186421e-07
TCGA-BP-5178-01A-01D-1429-08	66	63	3	47	4.545455e-02	0	coding only	34834024	16	47	4.593210e-07	1.349256e-06
TCGA-BP-5180-01A-01D-1429-08	43	43	0	37	0	0	coding only	34834024	6	37	1.722454e-07	1.062180e-06
TCGA-BP-5181-01A-01D-1429-08	81	75	6	59	7.407407e-02	0	coding only	34834024	14	51	4.019059e-07	1.464086e-06
TCGA-BP-5182-01A-01D-1429-08	66	64	2	48	3.030303e-02	0	coding only	34834024	16	48	4.593210e-07	1.377963e-06
TCGA-BP-5183-01A-01D-1429-08	58	56	2	42	3.448276e-02	0	coding only	34834024	13	42	3.731983e-07	1.205718e-06
TCGA-BP-5184-01A-01D-1429-08	33	33	0	22	0	0	coding only	34834024	11	21	3.157832e-07	6.028589e-07
TCGA-BP-5185-01A-01D-1429-08	86	85	1	70	1.162791e-02	0	coding only	34834024	15	70	4.306135e-07	2.009530e-06
TCGA-BP-5186-01A-01D-1429-08	35	35	0	30	0	0	coding only	34834024	5	29	1.435378e-07	8.325194e-07
TCGA-BP-5187-01A-01D-1429-08	70	69	1	53	1.428571e-02	0	coding only	34834024	16	53	4.593210e-07	1.521501e-06
TCGA-BP-5187-01A-01W-1477-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-5189-01A-02D-1429-08	49	49	0	40	0	0	coding only	34834024	9	40	2.583681e-07	1.148303e-06
TCGA-BP-5190-01A-01D-1429-08	46	46	0	38	0	0	coding only	34834024	8	38	2.296605e-07	1.090887e-06
TCGA-BP-5191-01A-01D-1429-08	67	65	2	48	2.985075e-02	0	coding only	34834024	17	48	4.880286e-07	1.377963e-06
TCGA-BP-5192-01A-01D-1429-08	58	57	1	44	1.724138e-02	0	coding only	34834024	13	44	3.731983e-07	1.263133e-06
TCGA-BP-5194-01A-02D-1429-08	27	27	0	16	0	0	coding only	34834024	11	16	3.157832e-07	4.593210e-07
TCGA-BP-5195-01A-02D-1429-08	61	59	2	48	3.278689e-02	0	coding only	34834024	11	48	3.157832e-07	1.377963e-06
TCGA-BP-5196-01A-01D-1429-08	56	56	0	41	0	0	coding only	34834024	14	40	4.019059e-07	1.148303e-06
TCGA-BP-5198-01A-01D-1429-08	79	77	2	63	2.531646e-02	0	coding only	34834024	13	62	3.731983e-07	1.779869e-06
TCGA-BP-5199-01A-01D-1429-08	87	87	0	70	0	0	coding only	34834024	17	70	4.880286e-07	2.009530e-06
TCGA-BP-5200-01A-01D-1429-08	47	45	2	35	4.255319e-02	0	coding only	34834024	9	34	2.583681e-07	9.760572e-07
TCGA-BP-5200-01A-01D-2101-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BP-5201-01A-01D-1429-08	40	39	1	34	2.500000e-02	0	coding only	34834024	5	33	1.435378e-07	9.473496e-07
TCGA-BP-5202-01A-02D-1429-08	44	41	3	35	6.818182e-02	0	coding only	34834024	6	35	1.722454e-07	1.004765e-06
TCGA-BQ-5875-01A-11D-1589-08	99	98	1	78	1.010101e-02	0	coding only	34834024	20	78	5.741513e-07	2.239190e-06
TCGA-BQ-5876-01A-11D-1589-08	112	111	1	88	8.928571e-03	0	coding only	34834024	23	81	6.602740e-07	2.325313e-06
TCGA-BQ-5877-01A-11D-1589-08	109	107	2	90	1.834862e-02	0	coding only	34834024	17	84	4.880286e-07	2.411435e-06
TCGA-BQ-5878-01A-11D-1589-08	134	134	0	96	0	0	coding only	34834024	36	90	1.033472e-06	2.583681e-06
TCGA-BQ-5879-01A-11D-1589-08	43	43	0	32	0	0	coding only	34834024	11	29	3.157832e-07	8.325194e-07
TCGA-BQ-5880-01A-11D-1589-08	81	81	0	63	0	0	coding only	34834024	17	62	4.880286e-07	1.779869e-06
TCGA-BQ-5881-01A-11D-1589-08	58	58	0	43	0	0	coding only	34834024	15	41	4.306135e-07	1.177010e-06
TCGA-BQ-5882-01A-11D-1589-08	89	89	0	70	0	0	coding only	34834024	17	68	4.880286e-07	1.952114e-06
TCGA-BQ-5883-01A-11D-1589-08	56	56	0	48	0	0	coding only	34834024	7	46	2.009530e-07	1.320548e-06
TCGA-BQ-5884-01A-11D-1589-08	82	81	1	61	1.219512e-02	0	coding only	34834024	19	56	5.454437e-07	1.607624e-06
TCGA-BQ-5885-01A-11D-1589-08	141	139	2	109	1.418440e-02	0	coding only	34834024	30	103	8.612269e-07	2.956879e-06
TCGA-BQ-5886-01A-11D-1589-08	91	91	0	74	0	0	coding only	34834024	17	71	4.880286e-07	2.038237e-06
TCGA-BQ-5887-01A-11D-1961-08	30	29	1	22	3.333333e-02	0	coding only	34834024	7	21	2.009530e-07	6.028589e-07
TCGA-BQ-5888-01A-11D-1589-08	44	44	0	29	0	0	coding only	34834024	15	28	4.306135e-07	8.038118e-07
TCGA-BQ-5889-01A-11D-1589-08	91	91	0	64	0	0	coding only	34834024	26	62	7.463967e-07	1.779869e-06
TCGA-BQ-5890-01A-11D-1589-08	104	104	0	82	0	0	coding only	34834024	22	76	6.315664e-07	2.181775e-06
TCGA-BQ-5891-01A-11D-1589-08	59	59	0	33	0	0	coding only	34834024	26	32	7.463967e-07	9.186421e-07
TCGA-BQ-5892-01A-11D-1589-08	89	89	0	75	0	0	coding only	34834024	12	68	3.444908e-07	1.952114e-06
TCGA-BQ-5893-01A-11D-1589-08	85	83	2	62	2.352941e-02	0	coding only	34834024	19	57	5.454437e-07	1.636331e-06
TCGA-BQ-5894-01A-11D-1589-08	55	55	0	45	0	0	coding only	34834024	10	40	2.870756e-07	1.148303e-06
TCGA-BQ-7044-01A-11D-1961-08	93	92	1	73	1.075269e-02	0	coding only	34834024	19	71	5.454437e-07	2.038237e-06
TCGA-BQ-7045-01A-31D-1961-08	100	100	0	74	0	0	coding only	34834024	26	74	7.463967e-07	2.124360e-06
TCGA-BQ-7046-01A-11D-1961-08	56	55	1	44	1.785714e-02	0	coding only	34834024	11	40	3.157832e-07	1.148303e-06
TCGA-BQ-7048-01A-11D-1961-08	92	89	3	68	3.260870e-02	0	coding only	34834024	21	65	6.028589e-07	1.865992e-06
TCGA-BQ-7050-01A-11D-1961-08	30	30	0	25	0	0	coding only	34834024	5	24	1.435378e-07	6.889816e-07
TCGA-BQ-7051-01A-12D-1961-08	109	109	0	79	0	0	coding only	34834024	28	78	8.038118e-07	2.239190e-06
TCGA-BQ-7053-01A-11D-1961-08	81	79	2	61	2.469136e-02	0	coding only	34834024	18	59	5.167362e-07	1.693746e-06
TCGA-BQ-7055-01A-11D-1961-08	17	17	0	11	0	0	coding only	34834024	6	11	1.722454e-07	3.157832e-07
TCGA-BQ-7058-01A-11D-1961-08	87	86	1	70	1.149425e-02	0	coding only	34834024	15	69	4.306135e-07	1.980822e-06
TCGA-BQ-7059-01A-11D-1961-08	103	101	2	74	1.941748e-02	0	coding only	34834024	27	71	7.751042e-07	2.038237e-06
TCGA-BQ-7060-01A-11D-1961-08	46	46	0	37	0	0	coding only	34834024	9	36	2.583681e-07	1.033472e-06
TCGA-BQ-7061-01A-11D-1961-08	100	100	0	84	0	0	coding only	34834024	16	81	4.593210e-07	2.325313e-06
TCGA-BQ-7062-01A-11D-1961-08	63	63	0	49	0	0	coding only	34834024	13	45	3.731983e-07	1.291840e-06
TCGA-CJ-4634-01A-02D-1386-10	99	97	2	69	2.020202e-02	0	coding only	34834024	28	66	8.038118e-07	1.894699e-06
TCGA-CJ-4635-01A-02D-1373-10	59	59	0	41	0	0	coding only	34834024	18	40	5.167362e-07	1.148303e-06
TCGA-CJ-4636-01A-02D-1386-10	61	60	1	49	1.639344e-02	0	coding only	34834024	11	48	3.157832e-07	1.377963e-06
TCGA-CJ-4636-01A-02W-1382-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-CJ-4637-01A-02D-1386-10	38	34	4	28	1.052632e-01	0	coding only	34834024	6	25	1.722454e-07	7.176891e-07
TCGA-CJ-4638-01A-02D-1386-10	74	73	1	55	1.351351e-02	0	coding only	34834024	16	53	4.593210e-07	1.521501e-06
TCGA-CJ-4639-01A-02D-1386-10	68	66	2	57	2.941176e-02	0	coding only	34834024	9	55	2.583681e-07	1.578916e-06
TCGA-CJ-4640-01A-02D-1386-10	61	58	3	45	4.918033e-02	0	coding only	34834024	12	41	3.444908e-07	1.177010e-06
TCGA-CJ-4641-01A-02D-1386-10	54	54	0	39	0	0	coding only	34834024	15	37	4.306135e-07	1.062180e-06
TCGA-CJ-4643-01A-02D-1386-10	85	79	6	61	7.058824e-02	0	coding only	34834024	15	57	4.306135e-07	1.636331e-06
TCGA-CJ-4644-01A-02D-1386-10	98	92	6	66	6.122449e-02	0	coding only	34834024	25	59	7.176891e-07	1.693746e-06
TCGA-CJ-4868-01A-01D-1373-10	24	24	0	18	0	0	coding only	34834024	6	18	1.722454e-07	5.167362e-07
TCGA-CJ-4869-01A-02D-1429-08	93	87	6	75	6.451613e-02	0	coding only	34834024	10	73	2.870756e-07	2.095652e-06
TCGA-CJ-4870-01A-01D-1373-10	47	47	0	37	0	0	coding only	34834024	10	37	2.870756e-07	1.062180e-06
TCGA-CJ-4871-01A-01D-1373-10	46	46	0	35	0	0	coding only	34834024	11	35	3.157832e-07	1.004765e-06
TCGA-CJ-4872-01A-01D-1373-10	37	37	0	23	0	0	coding only	34834024	14	23	4.019059e-07	6.602740e-07
TCGA-CJ-4872-01A-01W-1369-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-CJ-4873-01A-01D-1373-10	76	75	1	52	1.315789e-02	0	coding only	34834024	22	52	6.315664e-07	1.492793e-06
TCGA-CJ-4874-01A-01D-1373-10	62	62	0	41	0	0	coding only	34834024	21	40	6.028589e-07	1.148303e-06
TCGA-CJ-4875-01A-01D-1373-10	113	113	0	81	0	0	coding only	34834024	30	79	8.612269e-07	2.267898e-06
TCGA-CJ-4876-01A-01D-1373-10	44	44	0	38	0	0	coding only	34834024	6	37	1.722454e-07	1.062180e-06
TCGA-CJ-4878-01A-01D-1373-10	35	35	0	27	0	0	coding only	34834024	8	25	2.296605e-07	7.176891e-07
TCGA-CJ-4881-01A-01D-1373-10	51	51	0	36	0	0	coding only	34834024	15	36	4.306135e-07	1.033472e-06
TCGA-CJ-4882-01A-02D-1429-08	70	69	1	54	1.428571e-02	0	coding only	34834024	15	52	4.306135e-07	1.492793e-06
TCGA-CJ-4884-01A-01D-1373-10	47	47	0	35	0	0	coding only	34834024	12	34	3.444908e-07	9.760572e-07
TCGA-CJ-4884-01A-01W-1369-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-CJ-4885-01A-01D-1373-10	39	39	0	33	0	0	coding only	34834024	6	33	1.722454e-07	9.473496e-07
TCGA-CJ-4885-01A-01W-1369-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-CJ-4886-01A-01D-1373-10	23	23	0	19	0	0	coding only	34834024	4	18	1.148303e-07	5.167362e-07
TCGA-CJ-4887-01A-01D-1373-10	41	41	0	33	0	0	coding only	34834024	8	32	2.296605e-07	9.186421e-07
TCGA-CJ-4888-01A-01D-1373-10	15	14	1	9	6.666667e-02	0	coding only	34834024	5	9	1.435378e-07	2.583681e-07
TCGA-CJ-4889-01A-01D-1373-10	21	21	0	18	0	0	coding only	34834024	3	18	8.612269e-08	5.167362e-07
TCGA-CJ-4890-01A-01D-1373-10	19	19	0	15	0	0	coding only	34834024	4	15	1.148303e-07	4.306135e-07
TCGA-CJ-4891-01A-01D-1373-10	13	13	0	7	0	0	coding only	34834024	6	7	1.722454e-07	2.009530e-07
TCGA-CJ-4892-01A-01D-1373-10	46	46	0	35	0	0	coding only	34834024	10	34	2.870756e-07	9.760572e-07
TCGA-CJ-4892-01A-01W-1369-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-CJ-4893-01A-01D-1373-10	37	37	0	29	0	0	coding only	34834024	8	29	2.296605e-07	8.325194e-07
TCGA-CJ-4894-01A-01D-1373-10	70	70	0	52	0	0	coding only	34834024	18	52	5.167362e-07	1.492793e-06
TCGA-CJ-4895-01A-01D-1373-10	46	46	0	35	0	0	coding only	34834024	10	35	2.870756e-07	1.004765e-06
TCGA-CJ-4897-01A-03D-1429-08	74	72	2	50	2.702703e-02	0	coding only	34834024	22	48	6.315664e-07	1.377963e-06
TCGA-CJ-4899-01A-01D-1462-08	38	36	2	28	5.263158e-02	0	coding only	34834024	8	27	2.296605e-07	7.751042e-07
TCGA-CJ-4900-01A-01D-1462-08	87	80	7	68	8.045977e-02	0	coding only	34834024	11	65	3.157832e-07	1.865992e-06
TCGA-CJ-4901-01A-01D-1429-08	56	56	0	49	0	0	coding only	34834024	7	49	2.009530e-07	1.406671e-06
TCGA-CJ-4902-01A-01D-1429-08	71	67	4	56	5.633803e-02	0	coding only	34834024	11	56	3.157832e-07	1.607624e-06
TCGA-CJ-4903-01A-01D-1429-08	56	53	3	42	5.357143e-02	0	coding only	34834024	11	41	3.157832e-07	1.177010e-06
TCGA-CJ-4904-01A-02D-1429-08	45	43	2	33	4.444444e-02	0	coding only	34834024	10	30	2.870756e-07	8.612269e-07
TCGA-CJ-4905-01A-02D-1429-08	67	66	1	46	1.492537e-02	0	coding only	34834024	20	45	5.741513e-07	1.291840e-06
TCGA-CJ-4907-01A-01D-1429-08	67	67	0	51	0	0	coding only	34834024	16	50	4.593210e-07	1.435378e-06
TCGA-CJ-4908-01A-01D-1429-08	33	32	1	24	3.030303e-02	0	coding only	34834024	8	24	2.296605e-07	6.889816e-07
TCGA-CJ-4912-01A-01D-1429-08	90	88	2	65	2.222222e-02	0	coding only	34834024	23	64	6.602740e-07	1.837284e-06
TCGA-CJ-4913-01A-01D-1429-08	59	59	0	46	0	0	coding only	34834024	12	45	3.444908e-07	1.291840e-06
TCGA-CJ-4916-01A-01D-1429-08	49	49	0	37	0	0	coding only	34834024	12	37	3.444908e-07	1.062180e-06
TCGA-CJ-4918-01A-01D-1429-08	88	82	6	66	6.818182e-02	0	coding only	34834024	16	65	4.593210e-07	1.865992e-06
TCGA-CJ-4920-01A-01D-1429-08	155	153	2	127	1.290323e-02	0	coding only	34834024	25	124	7.176891e-07	3.559738e-06
TCGA-CJ-4923-01A-01D-1429-08	51	51	0	38	0	0	coding only	34834024	13	35	3.731983e-07	1.004765e-06
TCGA-CJ-5671-01A-11D-1534-10	74	73	1	51	1.351351e-02	0	coding only	34834024	22	49	6.315664e-07	1.406671e-06
TCGA-CJ-5672-01A-11D-1534-10	98	95	3	74	3.061224e-02	0	coding only	34834024	21	72	6.028589e-07	2.066945e-06
TCGA-CJ-5675-01A-11D-1534-10	75	74	1	55	1.333333e-02	0	coding only	34834024	18	52	5.167362e-07	1.492793e-06
TCGA-CJ-5675-01A-11W-1584-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-CJ-5676-01A-11D-1534-10	70	70	0	50	0	0	coding only	34834024	20	48	5.741513e-07	1.377963e-06
TCGA-CJ-5677-01A-11D-1534-10	84	82	2	65	2.380952e-02	0	coding only	34834024	16	64	4.593210e-07	1.837284e-06
TCGA-CJ-5678-01A-11D-1534-10	59	58	1	48	1.694915e-02	0	coding only	34834024	10	45	2.870756e-07	1.291840e-06
TCGA-CJ-5679-01A-11D-1534-10	110	105	5	85	4.545455e-02	1	exome+100bp flanks	34834024	19	78	5.454437e-07	2.239190e-06
TCGA-CJ-5679-01A-11W-1584-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-CJ-5680-01A-11D-1534-10	57	55	2	40	3.508772e-02	0	coding only	34834024	14	38	4.019059e-07	1.090887e-06
TCGA-CJ-5681-01A-11D-1534-10	38	37	1	29	2.631579e-02	0	coding only	34834024	8	25	2.296605e-07	7.176891e-07
TCGA-CJ-5682-01A-11D-1534-10	86	83	3	67	3.488372e-02	0	coding only	34834024	15	62	4.306135e-07	1.779869e-06
TCGA-CJ-5683-01A-11D-1534-10	85	81	4	59	4.705882e-02	0	coding only	34834024	20	56	5.741513e-07	1.607624e-06
TCGA-CJ-5684-01A-11D-1534-10	59	55	4	41	6.779661e-02	0	coding only	34834024	13	39	3.731983e-07	1.119595e-06
TCGA-CJ-5686-01A-11D-1669-08	72	71	1	54	1.388889e-02	0	coding only	34834024	17	51	4.880286e-07	1.464086e-06
TCGA-CJ-6027-01A-11D-1669-08	86	84	2	66	2.325581e-02	0	coding only	34834024	18	65	5.167362e-07	1.865992e-06
TCGA-CJ-6028-01A-11D-1669-08	59	57	2	44	3.389831e-02	0	coding only	34834024	13	43	3.731983e-07	1.234425e-06
TCGA-CJ-6030-01A-11D-1669-08	126	125	1	98	7.936508e-03	0	coding only	34834024	27	97	7.751042e-07	2.784634e-06
TCGA-CJ-6031-01A-11D-1669-08	65	63	2	49	3.076923e-02	0	coding only	34834024	14	48	4.019059e-07	1.377963e-06
TCGA-CJ-6032-01A-11D-1669-08	57	54	3	42	5.263158e-02	0	coding only	34834024	12	41	3.444908e-07	1.177010e-06
TCGA-CJ-6033-01A-11D-1669-08	86	85	1	64	1.162791e-02	0	coding only	34834024	20	64	5.741513e-07	1.837284e-06
TCGA-CW-5580-01A-01D-1669-08	106	103	3	71	2.830189e-02	0	coding only	34834024	32	71	9.186421e-07	2.038237e-06
TCGA-CW-5581-01A-02D-1534-10	68	66	2	57	2.941176e-02	0	coding only	34834024	8	56	2.296605e-07	1.607624e-06
TCGA-CW-5581-01A-02W-1584-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-CW-5583-01A-02D-1534-10	42	37	5	30	1.190476e-01	0	coding only	34834024	7	28	2.009530e-07	8.038118e-07
TCGA-CW-5585-01A-01D-1534-10	52	49	3	39	5.769231e-02	0	coding only	34834024	9	39	2.583681e-07	1.119595e-06
TCGA-CW-5588-01A-01D-1534-10	74	70	4	54	5.405405e-02	0	coding only	34834024	13	53	3.731983e-07	1.521501e-06
TCGA-CW-5589-01A-01D-1534-10	70	68	2	50	2.857143e-02	0	coding only	34834024	16	48	4.593210e-07	1.377963e-06
TCGA-CW-5591-01A-01D-1534-10	56	48	8	39	1.428571e-01	0	coding only	34834024	9	35	2.583681e-07	1.004765e-06
TCGA-CW-6087-01A-11D-1669-08	62	62	0	47	0	0	coding only	34834024	15	45	4.306135e-07	1.291840e-06
TCGA-CW-6090-01A-11D-1669-08	122	120	2	83	1.639344e-02	0	coding only	34834024	37	81	1.062180e-06	2.325313e-06
TCGA-CW-6093-01A-11D-1669-08	127	126	1	97	7.874016e-03	0	coding only	34834024	28	97	8.038118e-07	2.784634e-06
TCGA-CW-6097-01A-11D-1669-08	37	33	4	27	1.081081e-01	0	coding only	34834024	6	25	1.722454e-07	7.176891e-07
TCGA-CZ-4853-01A-01D-1429-08	118	117	1	88	8.474576e-03	0	coding only	34834024	28	87	8.038118e-07	2.497558e-06
TCGA-CZ-4854-01A-01D-1373-10	84	84	0	68	0	0	coding only	34834024	16	66	4.593210e-07	1.894699e-06
TCGA-CZ-4856-01A-02D-1429-08	61	61	0	48	0	0	coding only	34834024	13	48	3.731983e-07	1.377963e-06
TCGA-CZ-4857-01A-01D-1373-10	96	95	1	77	1.041667e-02	0	coding only	34834024	18	74	5.167362e-07	2.124360e-06
TCGA-CZ-4858-01A-01D-1373-10	69	69	0	54	0	0	coding only	34834024	15	53	4.306135e-07	1.521501e-06
TCGA-CZ-4858-01A-01W-1369-10	2	2	0	2	0	0	coding only	34834024	0	2	0	5.741513e-08
TCGA-CZ-4859-01A-02D-1429-08	118	112	6	90	5.084746e-02	1	exome+100bp flanks	34834024	22	88	6.315664e-07	2.526266e-06
TCGA-CZ-4861-01A-01D-1373-10	100	100	0	79	0	0	coding only	34834024	21	79	6.028589e-07	2.267898e-06
TCGA-CZ-4862-01A-01D-1373-10	78	78	0	50	0	0	coding only	34834024	27	49	7.751042e-07	1.406671e-06
TCGA-CZ-4863-01A-01D-1501-10	47	44	3	33	6.382979e-02	0	coding only	34834024	11	31	3.157832e-07	8.899345e-07
TCGA-CZ-4865-01A-02D-1501-10	75	73	2	61	2.666667e-02	0	coding only	34834024	12	59	3.444908e-07	1.693746e-06
TCGA-CZ-4866-01A-01D-1501-10	93	90	3	73	3.225806e-02	0	coding only	34834024	16	69	4.593210e-07	1.980822e-06
TCGA-CZ-5451-01A-01D-1501-10	91	89	2	73	2.197802e-02	0	coding only	34834024	16	73	4.593210e-07	2.095652e-06
TCGA-CZ-5452-01A-01D-1501-10	36	36	0	26	0	0	coding only	34834024	9	26	2.583681e-07	7.463967e-07
TCGA-CZ-5453-01A-01D-1501-10	100	94	6	72	6.000000e-02	1	exome+100bp flanks	34834024	22	69	6.315664e-07	1.980822e-06
TCGA-CZ-5454-01A-01D-1501-10	29	28	1	20	3.448276e-02	0	coding only	34834024	8	19	2.296605e-07	5.454437e-07
TCGA-CZ-5455-01A-01D-1501-10	32	31	1	22	3.125000e-02	0	coding only	34834024	9	22	2.583681e-07	6.315664e-07
TCGA-CZ-5455-01A-01W-1528-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-CZ-5456-01A-01D-1501-10	73	70	3	60	4.109589e-02	0	coding only	34834024	10	58	2.870756e-07	1.665039e-06
TCGA-CZ-5457-01A-01D-1501-10	87	87	0	71	0	0	coding only	34834024	16	69	4.593210e-07	1.980822e-06
TCGA-CZ-5457-01A-01W-1528-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-CZ-5458-01A-01D-1501-10	34	33	1	26	2.941176e-02	0	coding only	34834024	7	25	2.009530e-07	7.176891e-07
TCGA-CZ-5459-01A-01D-1501-10	109	107	2	82	1.834862e-02	0	coding only	34834024	24	79	6.889816e-07	2.267898e-06
TCGA-CZ-5460-01A-01D-1501-10	68	64	4	50	5.882353e-02	0	coding only	34834024	12	48	3.444908e-07	1.377963e-06
TCGA-CZ-5461-01A-01D-1501-10	76	72	4	65	5.263158e-02	0	coding only	34834024	6	63	1.722454e-07	1.808577e-06
TCGA-CZ-5462-01A-01D-1501-10	73	73	0	57	0	0	coding only	34834024	14	56	4.019059e-07	1.607624e-06
TCGA-CZ-5463-01A-01D-1501-10	54	54	0	44	0	0	coding only	34834024	10	42	2.870756e-07	1.205718e-06
TCGA-CZ-5465-01A-01D-1806-10	126	120	6	99	4.761905e-02	1	exome+100bp flanks	34834024	19	92	5.454437e-07	2.641096e-06
TCGA-CZ-5466-01A-01D-1501-10	73	72	1	55	1.369863e-02	0	coding only	34834024	16	51	4.593210e-07	1.464086e-06
TCGA-CZ-5466-01A-01W-1528-10	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-CZ-5467-01A-01D-1501-10	66	64	2	46	3.030303e-02	0	coding only	34834024	18	45	5.167362e-07	1.291840e-06
TCGA-CZ-5468-01A-01D-1501-10	149	147	2	114	1.342282e-02	0	coding only	34834024	32	107	9.186421e-07	3.071709e-06
TCGA-CZ-5469-01A-01D-1501-10	57	53	4	44	7.017544e-02	0	coding only	34834024	9	43	2.583681e-07	1.234425e-06
TCGA-CZ-5470-01A-01D-1501-10	54	50	4	43	7.407407e-02	0	coding only	34834024	7	42	2.009530e-07	1.205718e-06
TCGA-CZ-5982-01A-11D-1669-08	50	50	0	38	0	0	coding only	34834024	12	38	3.444908e-07	1.090887e-06
TCGA-CZ-5984-01A-11D-1669-08	47	47	0	34	0	0	coding only	34834024	13	34	3.731983e-07	9.760572e-07
TCGA-CZ-5985-01A-11D-1669-08	64	62	2	48	3.125000e-02	0	coding only	34834024	13	47	3.731983e-07	1.349256e-06
TCGA-CZ-5986-01A-11D-1669-08	64	61	3	48	4.687500e-02	0	coding only	34834024	13	47	3.731983e-07	1.349256e-06
TCGA-CZ-5987-01A-11D-1669-08	57	57	0	45	0	0	coding only	34834024	12	44	3.444908e-07	1.263133e-06
TCGA-CZ-5988-01A-11D-1669-08	49	49	0	32	0	0	coding only	34834024	17	31	4.880286e-07	8.899345e-07
TCGA-CZ-5989-01A-11D-1669-08	42	42	0	30	0	0	coding only	34834024	12	30	3.444908e-07	8.612269e-07
TCGA-DV-5565-01A-01D-1534-10	53	53	0	45	0	0	coding only	34834024	8	44	2.296605e-07	1.263133e-06
TCGA-DV-5566-01A-01D-1534-10	40	40	0	26	0	0	coding only	34834024	14	26	4.019059e-07	7.463967e-07
TCGA-DV-5568-01A-01D-1534-10	13	13	0	11	0	0	coding only	34834024	2	11	5.741513e-08	3.157832e-07
TCGA-DV-5569-01A-01D-1534-10	24	22	2	18	8.333333e-02	0	coding only	34834024	4	16	1.148303e-07	4.593210e-07
TCGA-DV-5574-01A-01D-1534-10	27	27	0	21	0	0	coding only	34834024	6	20	1.722454e-07	5.741513e-07
TCGA-DV-5575-01A-01D-1534-10	39	38	1	30	2.564103e-02	0	coding only	34834024	8	27	2.296605e-07	7.751042e-07
TCGA-DV-5576-01A-01D-1534-10	29	28	1	23	3.448276e-02	0	coding only	34834024	5	22	1.435378e-07	6.315664e-07
TCGA-DW-5560-01A-01D-1589-08	75	73	2	53	2.666667e-02	0	coding only	34834024	20	51	5.741513e-07	1.464086e-06
TCGA-DW-5561-01A-01D-1589-08	60	60	0	45	0	0	coding only	34834024	15	42	4.306135e-07	1.205718e-06
TCGA-DW-7834-01A-11D-2136-08	90	89	1	65	1.111111e-02	0	coding only	34834024	24	59	6.889816e-07	1.693746e-06
TCGA-DW-7837-01A-11D-2136-08	45	45	0	35	0	0	coding only	34834024	10	32	2.870756e-07	9.186421e-07
TCGA-DW-7838-01A-11D-2136-08	124	124	0	93	0	0	coding only	34834024	30	90	8.612269e-07	2.583681e-06
TCGA-DW-7839-01A-11D-2136-08	59	58	1	50	1.694915e-02	0	coding only	34834024	7	47	2.009530e-07	1.349256e-06
TCGA-DW-7840-01A-11D-2136-08	122	122	0	94	0	0	coding only	34834024	27	90	7.751042e-07	2.583681e-06
TCGA-DW-7841-01A-11D-2136-08	68	68	0	54	0	0	coding only	34834024	14	53	4.019059e-07	1.521501e-06
TCGA-DW-7842-01A-11D-2136-08	44	44	0	38	0	0	coding only	34834024	6	34	1.722454e-07	9.760572e-07
TCGA-DW-7963-01B-11D-A28G-10	63	63	0	44	0	0	coding only	34834024	16	40	4.593210e-07	1.148303e-06
TCGA-DZ-6131-01A-11D-1961-08	44	43	1	30	2.272727e-02	0	coding only	34834024	12	29	3.444908e-07	8.325194e-07
TCGA-DZ-6132-01A-11D-1961-08	142	142	0	121	0	0	coding only	34834024	20	116	5.741513e-07	3.330078e-06
TCGA-DZ-6133-01A-11D-1961-08	126	126	0	97	0	0	coding only	34834024	28	90	8.038118e-07	2.583681e-06
TCGA-DZ-6134-01A-11D-1961-08	61	60	1	43	1.639344e-02	0	coding only	34834024	14	42	4.019059e-07	1.205718e-06
TCGA-DZ-6135-01A-11D-1961-08	46	46	0	32	0	0	coding only	34834024	14	30	4.019059e-07	8.612269e-07
TCGA-EU-5904-01A-11D-1669-08	48	46	2	33	4.166667e-02	0	coding only	34834024	11	32	3.157832e-07	9.186421e-07
TCGA-EU-5905-01A-11D-1669-08	64	64	0	54	0	0	coding only	34834024	10	54	2.870756e-07	1.550208e-06
TCGA-EU-5906-01A-11D-1669-08	68	68	0	52	0	0	coding only	34834024	15	52	4.306135e-07	1.492793e-06
TCGA-EU-5907-01A-11D-1669-08	52	52	0	42	0	0	coding only	34834024	9	41	2.583681e-07	1.177010e-06
TCGA-EV-5901-01A-11D-1589-08	57	55	2	47	3.508772e-02	0	coding only	34834024	8	46	2.296605e-07	1.320548e-06
TCGA-EV-5902-01A-11D-1589-08	109	108	1	87	9.174312e-03	0	coding only	34834024	20	80	5.741513e-07	2.296605e-06
TCGA-EV-5903-01A-11D-1589-08	140	140	0	114	0	0	coding only	34834024	21	101	6.028589e-07	2.899464e-06
TCGA-F9-A4JJ-01A-11D-A25F-10	56	53	3	39	5.357143e-02	0	coding only	34834024	13	37	3.731983e-07	1.062180e-06
TCGA-G7-6789-01A-11D-1961-08	36	36	0	28	0	0	coding only	34834024	8	25	2.296605e-07	7.176891e-07
TCGA-G7-6790-01A-11D-1961-08	89	89	0	69	0	0	coding only	34834024	19	67	5.454437e-07	1.923407e-06
TCGA-G7-6792-01A-21D-1961-08	57	57	0	37	0	0	coding only	34834024	20	34	5.741513e-07	9.760572e-07
TCGA-G7-6793-01A-11D-1961-08	50	49	1	38	2.000000e-02	0	coding only	34834024	11	36	3.157832e-07	1.033472e-06
TCGA-G7-6795-01A-11D-1961-08	81	80	1	56	1.234568e-02	0	coding only	34834024	24	55	6.889816e-07	1.578916e-06
TCGA-G7-6796-01A-11D-1961-08	74	73	1	55	1.351351e-02	0	coding only	34834024	17	52	4.880286e-07	1.492793e-06
TCGA-G7-6797-01A-11D-1961-08	82	81	1	61	1.219512e-02	0	coding only	34834024	19	59	5.454437e-07	1.693746e-06
TCGA-G7-7501-01A-11D-2201-08	56	56	0	41	0	0	coding only	34834024	13	38	3.731983e-07	1.090887e-06
TCGA-G7-7502-01A-11D-2201-08	98	97	1	77	1.020408e-02	0	coding only	34834024	20	74	5.741513e-07	2.124360e-06
TCGA-G7-A4TM-01A-11D-A31X-10	53	53	0	39	0	0	coding only	34834024	14	35	4.019059e-07	1.004765e-06
TCGA-GL-6846-01A-11D-1961-08	94	93	1	72	1.063830e-02	0	coding only	34834024	20	68	5.741513e-07	1.952114e-06
TCGA-GL-7773-01A-11D-2136-08	155	155	0	116	0	0	coding only	34834024	36	108	1.033472e-06	3.100417e-06
TCGA-GL-7966-01A-11D-2201-08	64	64	0	44	0	0	coding only	34834024	20	41	5.741513e-07	1.177010e-06
TCGA-GL-8500-01A-11D-2396-08	122	122	0	93	0	0	coding only	34834024	28	86	8.038118e-07	2.468851e-06
TCGA-GL-A4EM-01A-11D-A25F-10	102	101	1	78	9.803922e-03	0	coding only	34834024	20	70	5.741513e-07	2.009530e-06
TCGA-GL-A59R-01A-11D-A26P-10	117	115	2	89	1.709402e-02	0	coding only	34834024	25	85	7.176891e-07	2.440143e-06
TCGA-GL-A59T-01A-21D-A28G-10	123	123	0	87	0	0	coding only	34834024	32	82	9.186421e-07	2.354020e-06
TCGA-HE-7128-01A-11D-1961-08	59	59	0	50	0	0	coding only	34834024	7	47	2.009530e-07	1.349256e-06
TCGA-HE-7129-01A-11D-1961-08	65	65	0	46	0	0	coding only	34834024	18	42	5.167362e-07	1.205718e-06
TCGA-HE-7130-01A-11D-1961-08	230	230	0	185	0	0	coding only	34834024	43	178	1.234425e-06	5.109947e-06
TCGA-HE-A5NF-01A-11D-A26P-10	89	87	2	70	2.247191e-02	0	coding only	34834024	17	65	4.880286e-07	1.865992e-06
TCGA-HE-A5NH-01A-11D-A26P-10	101	99	2	84	1.980198e-02	0	coding only	34834024	14	77	4.019059e-07	2.210482e-06
TCGA-HE-A5NI-01A-11D-A26P-10	138	136	2	102	1.449275e-02	0	coding only	34834024	33	96	9.473496e-07	2.755926e-06
TCGA-HE-A5NJ-01A-11D-A26P-10	87	87	0	71	0	0	coding only	34834024	14	68	4.019059e-07	1.952114e-06
TCGA-HE-A5NK-01A-11D-A26P-10	128	126	2	96	1.562500e-02	0	coding only	34834024	29	90	8.325194e-07	2.583681e-06
TCGA-HE-A5NL-01A-11D-A26P-10	100	99	1	73	1.000000e-02	0	coding only	34834024	24	68	6.889816e-07	1.952114e-06
TCGA-IA-A40U-01A-11D-A25F-10	65	64	1	56	1.538462e-02	0	coding only	34834024	8	50	2.296605e-07	1.435378e-06
TCGA-IA-A40X-01A-11D-A25F-10	42	42	0	35	0	0	coding only	34834024	7	32	2.009530e-07	9.186421e-07
TCGA-IA-A40Y-01A-11D-A25F-10	105	103	2	80	1.904762e-02	0	coding only	34834024	22	76	6.315664e-07	2.181775e-06
TCGA-IZ-8195-01A-31D-2396-08	106	106	0	78	0	0	coding only	34834024	25	69	7.176891e-07	1.980822e-06
TCGA-IZ-8196-01A-11D-2396-08	132	132	0	101	0	0	coding only	34834024	29	96	8.325194e-07	2.755926e-06
TCGA-IZ-A6M8-01A-11D-A31X-10	114	112	2	81	1.754386e-02	0	coding only	34834024	30	71	8.612269e-07	2.038237e-06
TCGA-IZ-A6M9-01A-11D-A31X-10	113	110	3	89	2.654867e-02	0	coding only	34834024	20	80	5.741513e-07	2.296605e-06
TCGA-J7-6720-01A-11D-2136-08	62	61	1	47	1.612903e-02	0	coding only	34834024	13	45	3.731983e-07	1.291840e-06
TCGA-J7-8537-01A-11D-2396-08	68	68	0	55	0	0	coding only	34834024	12	51	3.444908e-07	1.464086e-06
TCGA-KL-8323-01A-21D-2310-10	74	71	3	53	4.054054e-02	0	coding only	34834024	17	47	4.880286e-07	1.349256e-06
TCGA-KL-8324-01A-11D-2310-10	113	111	2	77	1.769912e-02	0	coding only	34834024	33	73	9.473496e-07	2.095652e-06
TCGA-KL-8325-01A-11D-2310-10	79	75	4	59	5.063291e-02	0	coding only	34834024	15	56	4.306135e-07	1.607624e-06
TCGA-KL-8326-01A-11D-2310-10	79	75	4	55	5.063291e-02	0	coding only	34834024	17	47	4.880286e-07	1.349256e-06
TCGA-KL-8327-01A-11D-2310-10	55	53	2	45	3.636364e-02	0	coding only	34834024	8	41	2.296605e-07	1.177010e-06
TCGA-KL-8328-01A-11D-2310-10	95	89	6	62	6.315789e-02	0	coding only	34834024	26	57	7.463967e-07	1.636331e-06
TCGA-KL-8329-01A-11D-2310-10	118	110	8	83	6.779661e-02	1	exome+100bp flanks	34834024	22	78	6.315664e-07	2.239190e-06
TCGA-KL-8330-01A-11D-2310-10	95	90	5	61	5.263158e-02	0	coding only	34834024	26	56	7.463967e-07	1.607624e-06
TCGA-KL-8331-01A-11D-2310-10	79	76	3	55	3.797468e-02	0	coding only	34834024	20	51	5.741513e-07	1.464086e-06
TCGA-KL-8332-01A-11D-2310-10	71	69	2	58	2.816901e-02	0	coding only	34834024	10	53	2.870756e-07	1.521501e-06
TCGA-KL-8333-01A-11D-2310-10	66	61	5	44	7.575758e-02	0	coding only	34834024	17	40	4.880286e-07	1.148303e-06
TCGA-KL-8334-01A-11D-2310-10	77	77	0	54	0	0	coding only	34834024	21	52	6.028589e-07	1.492793e-06
TCGA-KL-8335-01A-11D-2310-10	107	105	2	81	1.869159e-02	0	coding only	34834024	23	75	6.602740e-07	2.153067e-06
TCGA-KL-8336-01A-11D-2310-10	80	77	3	63	3.750000e-02	0	coding only	34834024	12	59	3.444908e-07	1.693746e-06
TCGA-KL-8337-01A-11D-2310-10	79	75	4	56	5.063291e-02	0	coding only	34834024	16	54	4.593210e-07	1.550208e-06
TCGA-KL-8338-01A-11D-2310-10	54	53	1	43	1.851852e-02	0	coding only	34834024	10	41	2.870756e-07	1.177010e-06
TCGA-KL-8339-01A-11D-2310-10	106	104	2	77	1.886792e-02	0	coding only	34834024	27	71	7.751042e-07	2.038237e-06
TCGA-KL-8340-01A-11D-2310-10	57	57	0	44	0	0	coding only	34834024	11	41	3.157832e-07	1.177010e-06
TCGA-KL-8341-01A-11D-2310-10	153	147	6	106	3.921569e-02	1	exome+100bp flanks	34834024	37	93	1.062180e-06	2.669804e-06
TCGA-KL-8342-01A-11D-2310-10	74	73	1	50	1.351351e-02	0	coding only	34834024	21	48	6.028589e-07	1.377963e-06
TCGA-KL-8343-01A-11D-2310-10	90	90	0	74	0	0	coding only	34834024	16	67	4.593210e-07	1.923407e-06
TCGA-KL-8344-01A-11D-2310-10	73	70	3	50	4.109589e-02	0	coding only	34834024	19	44	5.454437e-07	1.263133e-06
TCGA-KL-8345-01A-11D-2310-10	68	65	3	49	4.411765e-02	0	coding only	34834024	16	45	4.593210e-07	1.291840e-06
TCGA-KL-8346-01A-11D-2310-10	88	85	3	62	3.409091e-02	0	coding only	34834024	21	55	6.028589e-07	1.578916e-06
TCGA-KM-8438-01A-11D-2310-10	100	99	1	71	1.000000e-02	0	coding only	34834024	27	66	7.751042e-07	1.894699e-06
TCGA-KM-8439-01A-11D-2310-10	50	50	0	40	0	0	coding only	34834024	9	38	2.583681e-07	1.090887e-06
TCGA-KM-8440-01A-11D-2310-10	73	68	5	50	6.849315e-02	0	coding only	34834024	17	46	4.880286e-07	1.320548e-06
TCGA-KM-8441-01A-11D-2310-10	66	62	4	51	6.060606e-02	0	coding only	34834024	11	50	3.157832e-07	1.435378e-06
TCGA-KM-8442-01A-11D-2310-10	87	83	4	57	4.597701e-02	0	coding only	34834024	25	55	7.176891e-07	1.578916e-06
TCGA-KM-8443-01A-11D-2310-10	70	69	1	58	1.428571e-02	0	coding only	34834024	11	57	3.157832e-07	1.636331e-06
TCGA-KM-8476-01A-11D-2310-10	113	109	4	78	3.539823e-02	0	coding only	34834024	30	76	8.612269e-07	2.181775e-06
TCGA-KM-8477-01A-11D-2310-10	62	60	2	42	3.225806e-02	0	coding only	34834024	17	38	4.880286e-07	1.090887e-06
TCGA-KM-8639-01A-11D-2397-10	67	65	2	52	2.985075e-02	0	coding only	34834024	13	50	3.731983e-07	1.435378e-06
TCGA-KN-8418-01A-11D-2310-10	61	60	1	42	1.639344e-02	0	coding only	34834024	18	38	5.167362e-07	1.090887e-06
TCGA-KN-8419-01A-11D-2310-10	72	69	3	46	4.166667e-02	0	coding only	34834024	22	41	6.315664e-07	1.177010e-06
TCGA-KN-8421-01A-11D-2310-10	67	63	4	40	5.970149e-02	0	coding only	34834024	21	38	6.028589e-07	1.090887e-06
TCGA-KN-8422-01A-11D-2310-10	76	74	2	55	2.631579e-02	0	coding only	34834024	19	54	5.454437e-07	1.550208e-06
TCGA-KN-8423-01A-11D-2310-10	70	70	0	48	0	0	coding only	34834024	21	43	6.028589e-07	1.234425e-06
TCGA-KN-8424-01A-11D-2310-10	97	95	2	64	2.061856e-02	0	coding only	34834024	31	62	8.899345e-07	1.779869e-06
TCGA-KN-8425-01A-11D-2310-10	82	76	6	64	7.317073e-02	0	coding only	34834024	8	62	2.296605e-07	1.779869e-06
TCGA-KN-8426-01A-11D-2310-10	96	95	1	67	1.041667e-02	0	coding only	34834024	26	65	7.463967e-07	1.865992e-06
TCGA-KN-8427-01A-11D-2310-10	133	132	1	94	7.518797e-03	0	coding only	34834024	38	90	1.090887e-06	2.583681e-06
TCGA-KN-8428-01A-11D-2310-10	1162	1142	20	808	1.721170e-02	0	coding only	34834024	315	769	9.042883e-06	2.207612e-05
TCGA-KN-8429-01A-11D-2310-10	85	79	6	58	7.058824e-02	0	coding only	34834024	20	51	5.741513e-07	1.464086e-06
TCGA-KN-8430-01A-11D-2310-10	130	126	4	96	3.076923e-02	0	coding only	34834024	27	92	7.751042e-07	2.641096e-06
TCGA-KN-8431-01A-11D-2310-10	74	63	11	48	1.486486e-01	0	coding only	34834024	13	42	3.731983e-07	1.205718e-06
TCGA-KN-8432-01A-11D-2310-10	139	136	3	106	2.158273e-02	0	coding only	34834024	30	95	8.612269e-07	2.727219e-06
TCGA-KN-8433-01A-11D-2310-10	275	269	6	176	2.181818e-02	0	coding only	34834024	85	166	2.440143e-06	4.765456e-06
TCGA-KN-8434-01A-11D-2310-10	77	73	4	54	5.194805e-02	0	coding only	34834024	19	47	5.454437e-07	1.349256e-06
TCGA-KN-8435-01A-11D-2310-10	93	88	5	68	5.376344e-02	0	coding only	34834024	19	63	5.454437e-07	1.808577e-06
TCGA-KN-8436-01A-11D-2310-10	154	143	11	107	7.142857e-02	1	exome+100bp flanks	34834024	35	96	1.004765e-06	2.755926e-06
TCGA-KN-8437-01A-11D-2310-10	54	53	1	37	1.851852e-02	0	coding only	34834024	14	33	4.019059e-07	9.473496e-07
TCGA-KO-8403-01A-11D-2310-10	62	62	0	44	0	0	coding only	34834024	16	43	4.593210e-07	1.234425e-06
TCGA-KO-8404-01A-11D-2310-10	157	152	5	117	3.184713e-02	1	exome+100bp flanks	34834024	34	111	9.760572e-07	3.186540e-06
TCGA-KO-8405-01A-11D-2310-10	65	64	1	51	1.538462e-02	0	coding only	34834024	11	46	3.157832e-07	1.320548e-06
TCGA-KO-8406-01A-11D-2310-10	91	89	2	68	2.197802e-02	0	coding only	34834024	15	61	4.306135e-07	1.751161e-06
TCGA-KO-8407-01A-11D-2310-10	95	92	3	72	3.157895e-02	0	coding only	34834024	18	67	5.167362e-07	1.923407e-06
TCGA-KO-8408-01A-11D-2310-10	168	163	5	125	2.976190e-02	0	coding only	34834024	34	119	9.760572e-07	3.416200e-06
TCGA-KO-8409-01A-11D-2310-10	108	104	4	82	3.703704e-02	0	coding only	34834024	22	80	6.315664e-07	2.296605e-06
TCGA-KO-8410-01A-11D-2310-10	86	80	6	58	6.976744e-02	0	coding only	34834024	20	47	5.741513e-07	1.349256e-06
TCGA-KO-8411-01A-11D-2310-10	74	72	2	54	2.702703e-02	0	coding only	34834024	16	48	4.593210e-07	1.377963e-06
TCGA-KO-8413-01A-11D-2310-10	59	58	1	40	1.694915e-02	0	coding only	34834024	17	37	4.880286e-07	1.062180e-06
TCGA-KO-8414-01A-11D-2310-10	64	62	2	45	3.125000e-02	0	coding only	34834024	17	40	4.880286e-07	1.148303e-06
TCGA-KO-8415-01A-11D-2310-10	93	88	5	55	5.376344e-02	0	coding only	34834024	31	51	8.899345e-07	1.464086e-06
TCGA-KO-8416-01A-11D-2310-10	82	81	1	53	1.219512e-02	0	coding only	34834024	24	47	6.889816e-07	1.349256e-06
TCGA-KO-8417-01A-11D-2310-10	106	104	2	75	1.886792e-02	0	coding only	34834024	29	69	8.325194e-07	1.980822e-06
TCGA-KV-A6GD-01A-11D-A31X-10	98	98	0	74	0	0	coding only	34834024	24	68	6.889816e-07	1.952114e-06
TCGA-KV-A6GE-01A-11D-A31X-10	83	82	1	60	1.204819e-02	0	coding only	34834024	19	56	5.454437e-07	1.607624e-06
TCGA-MH-A55W-01A-11D-A26P-10	124	124	0	94	0	0	coding only	34834024	29	90	8.325194e-07	2.583681e-06
TCGA-MH-A55Z-01A-11D-A26P-10	129	129	0	98	0	0	coding only	34834024	29	92	8.325194e-07	2.641096e-06
TCGA-MH-A560-01A-11D-A26P-10	80	80	0	64	0	0	coding only	34834024	16	61	4.593210e-07	1.751161e-06
TCGA-MH-A561-01A-11D-A26P-10	148	146	2	120	1.351351e-02	0	coding only	34834024	24	111	6.889816e-07	3.186540e-06
TCGA-MH-A562-01A-11D-A26P-10	92	90	2	58	2.173913e-02	0	coding only	34834024	29	53	8.325194e-07	1.521501e-06
TCGA-P4-A5E6-01A-11D-A28G-10	130	129	1	99	7.692308e-03	0	coding only	34834024	28	90	8.038118e-07	2.583681e-06
TCGA-P4-A5E7-01A-31D-A28G-10	134	131	3	100	2.238806e-02	0	coding only	34834024	29	93	8.325194e-07	2.669804e-06
TCGA-P4-A5E8-01A-11D-A28G-10	72	71	1	55	1.388889e-02	0	coding only	34834024	14	53	4.019059e-07	1.521501e-06
TCGA-P4-A5EA-01A-11D-A28G-10	118	117	1	90	8.474576e-03	0	coding only	34834024	22	84	6.315664e-07	2.411435e-06
TCGA-P4-A5EB-01A-11D-A28G-10	205	197	8	152	3.902439e-02	1	exome+100bp flanks	34834024	45	135	1.291840e-06	3.875521e-06
TCGA-P4-A5ED-01A-11D-A28G-10	50	50	0	36	0	0	coding only	34834024	14	34	4.019059e-07	9.760572e-07
TCGA-PJ-A5Z8-01A-11D-A28G-10	103	103	0	83	0	0	coding only	34834024	19	77	5.454437e-07	2.210482e-06
TCGA-PJ-A5Z9-01A-11D-A28G-10	93	90	3	67	3.225806e-02	0	coding only	34834024	22	64	6.315664e-07	1.837284e-06
TCGA-Q2-A5QZ-01A-11D-A28G-10	160	156	4	104	2.500000e-02	0	coding only	34834024	47	97	1.349256e-06	2.784634e-06