Clinical Features	MRNA_CNMF		MRNA_CHIERARCHICAL		CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nMutated (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
SETD2	46 (10%)	395	0.81623	1	0.13403	0.71	0.53662	1	8.9999e-05	0.0036	0.69902	1	0.2044	0.809	0.36991	1	0.03061	0.32	0.31624	1	0.30133	0.977	0.39197	1	0.21505	0.823
BAP1	44 (10%)	397	0.0041	0.0624	0.00034	0.0102	0.02967	0.32	5e-05	0.003	0.00226	0.0387	0.03044	0.32	9.9999e-06	9e-04	9.9999e-06	9e-04	9.9999e-06	9e-04	3e-05	0.00216	0.16142	0.749	0.69604	1
PBRM1	139 (32%)	302	0.11883	0.684	0.077959	0.53	0.00416	0.0624	9.9999e-06	9e-04	0.00025	0.009	1	1	0.00038	0.0105	0.00054999	0.0132	0.00062999	0.0142	0.0070599	0.102	6.9999e-05	0.00315	0.049	0.412
KDM5C	27 (6%)	414	NA	NA	NA	NA	0.16577	0.749	0.064939	0.497	0.3756	1	0.17336	0.749	0.04801	0.412	0.00115	0.0218	0.01997	0.256	0.03268	0.327	1	1	1	1
VHL	171 (39%)	270	0.0077099	0.107	0.03113	0.32	0.35541	1	0.55463	1	0.04143	0.382	0.33104	1	0.00042	0.0108	0.01321	0.176	0.03588	0.349	0.070509	0.501	0.43148	1	0.63474	1
PTEN	17 (4%)	424	0.30028	0.977	0.11086	0.676	0.18533	0.758	0.17567	0.749	0.24374	0.9	0.27157	0.949	5.9999e-05	0.00309	0.00204	0.0367	0.00406	0.0624	0.17121	0.749	0.052729	0.431	1	1
MTOR	28 (6%)	413	NA	NA	NA	NA	0.5612	1	0.13412	0.71	0.00099999	0.0204	0.00033	0.0102	0.93587	1	0.84118	1	0.36206	1	0.41171	1	0.942	1	1	1
TP53	12 (3%)	429	NA	NA	NA	NA	0.24995	0.9	0.82749	1	0.34861	1	0.14929	0.736	0.13759	0.717	0.04924	0.412	0.16418	0.749	0.37259	1	1	1	1	1
FAM200A	5 (1%)	436	NA	NA	NA	NA	0.72692	1	NA	NA	0.00102	0.0204	0.25451	0.907	0.17684	0.749	0.50633	1	0.14181	0.719	0.37796	1	NA	NA	NA	NA
NEFH	5 (1%)	436	NA	NA	NA	NA	0.86226	1	0.45441	1	0.97888	1	0.18091	0.757	0.03913	0.371	0.02672	0.31	0.46063	1	0.91316	1	0.33767	1	0.13943	0.717
PTCH1	7 (2%)	434	NA	NA	NA	NA	1	1	0.02063	0.256	0.40113	1	0.15786	0.749	0.88508	1	0.12248	0.684	1	1	0.68351	1	NA	NA	NA	NA
NF2	6 (1%)	435	NA	NA	NA	NA	0.02133	0.256	0.34703	1	0.21639	0.823	0.57345	1	0.12	0.684	0.19741	0.797	0.082059	0.547	0.37661	1	NA	NA	NA	NA
CCDC120	4 (1%)	437	NA	NA	NA	NA	0.12356	0.684	NA	NA	0.42219	1	1	1	0.68563	1	0.84528	1	0.82929	1	1	1	NA	NA	NA	NA
PIK3CA	12 (3%)	429	NA	NA	NA	NA	0.42227	1	0.44897	1	0.80432	1	0.33746	1	0.23962	0.899	0.67447	1	0.87191	1	0.8756	1	NA	NA	NA	NA
ATM	12 (3%)	429	NA	NA	NA	NA	0.93312	1	0.47112	1	0.59422	1	1	1	0.16438	0.749	0.35075	1	0.10099	0.648	0.072299	0.501	NA	NA	NA	NA
KIAA1751	6 (1%)	435	NA	NA	NA	NA	0.57751	1	0.45597	1	0.61782	1	0.094129	0.616	0.43295	1	0.66479	1	0.39088	1	0.35742	1	NA	NA	NA	NA
GUSB	4 (1%)	437	NA	NA	NA	NA	0.48028	1	NA	NA	0.30964	0.995	0.62227	1	0.19922	0.797	0.30104	0.977	0.55424	1	0.8752	1	NA	NA	NA	NA
ARID1A	11 (2%)	430	NA	NA	NA	NA	0.92591	1	0.37763	1	0.97009	1	1	1	0.67617	1	0.96884	1	0.5453	1	0.11811	0.684	0.48151	1	0.29769	0.977
GPR50	3 (1%)	438	NA	NA	NA	NA	0.10256	0.648	0.24969	0.9	0.069059	0.501	0.79216	1	0.80328	1	0.21709	0.823	0.11774	0.684	0.43626	1	NA	NA	NA	NA
PCK1	5 (1%)	436	NA	NA	NA	NA	0.38747	1	0.61839	1	1	1	0.81544	1	0.73706	1	0.74357	1	0.73227	1	0.40362	1	NA	NA	NA	NA
DPCR1	6 (1%)	435	NA	NA	NA	NA	0.28774	0.977	0.58151	1	0.21236	0.823	1	1	0.17609	0.749	0.04436	0.399	0.76621	1	1	1	NA	NA	NA	NA
NFAT5	6 (1%)	435	NA	NA	NA	NA	0.49336	1	0.87807	1	0.24614	0.9	0.52864	1	0.26488	0.935	0.40587	1	0.33529	1	0.071749	0.501	NA	NA	NA	NA
EGFR	7 (2%)	434	NA	NA	NA	NA	0.71022	1	0.6806	1	0.74738	1	0.49088	1	0.47769	1	0.94233	1	1	1	0.071439	0.501	NA	NA	NA	NA
TRIM6	5 (1%)	436	NA	NA	NA	NA	1	1	1	1	0.74612	1	0.058739	0.469	1	1	0.17285	0.749	0.37487	1	0.55595	1	NA	NA	NA	NA
RBMX	4 (1%)	437	NA	NA	NA	NA	0.69217	1	0.61844	1	0.10942	0.676	0.46213	1	0.42761	1	0.47991	1	0.34211	1	0.1641	0.749	NA	NA	NA	NA
GPR172B	4 (1%)	437	NA	NA	NA	NA	1	1	NA	NA	0.13229	0.71	0.7919	1	0.53822	1	1	1	0.61399	1	1	1	NA	NA	NA	NA
FGFR3	4 (1%)	437	NA	NA	NA	NA	0.6942	1	0.8358	1	1	1	1	1	1	1	0.47948	1	0.83239	1	0.28707	0.977	NA	NA	NA	NA
ARAP3	3 (1%)	438	NA	NA	NA	NA	0.61799	1	NA	NA	1	1	1	1	0.60722	1	1	1	0.79236	1	0.83321	1	NA	NA	NA	NA
OPTC	4 (1%)	437	NA	NA	NA	NA	0.58452	1	0.18495	0.758	NA	NA	NA	NA	1	1	0.14398	0.72	0.83168	1	0.29007	0.977	NA	NA	NA	NA
GOLGA5	5 (1%)	436	NA	NA	NA	NA	0.059989	0.469	NA	NA	0.29742	0.977	0.73049	1	0.52777	1	0.6013	1	1	1	0.51674	1	NA	NA	NA	NA