Signaling events mediated by the Hedgehog family Entity Mean Std Dev Mean of Up Perturbations Number of Up Perturbations Mean of Down Perturbations Number of Down Perturbations Number of Total Perturbations TGFB2 -0.039 0.168 0.392 1.0 -0.575 5.0 6.0 IHH -0.093 0.245 0.245 1.0 -0.583 50.0 51.0 SHH Np/Cholesterol/GAS1 -0.055 0.111 0.159 1.0 -0.32 37.0 38.0 LRPAP1 0.019 0.004 -9999.0 0.0 -9999.0 0.0 0.0 dorsoventral neural tube patterning 0.055 0.11 0.318 37.0 -0.157 1.0 38.0 SMO/beta Arrestin2 -0.078 0.196 0.318 1.0 -0.421 50.0 51.0 SMO -0.088 0.196 -9999.0 0.0 -0.436 51.0 51.0 AKT1 -0.035 0.12 -9999.0 0.0 -0.515 6.0 6.0 ARRB2 0.018 0.005 -9999.0 0.0 -9999.0 0.0 0.0 BOC 0.019 0.06 0.255 5.0 -0.549 2.0 7.0 ADRBK1 0.019 0.003 -9999.0 0.0 -9999.0 0.0 0.0 heart looping -0.088 0.195 -9999.0 0.0 -0.429 52.0 52.0 STIL -0.063 0.168 0.287 7.0 -0.481 11.0 18.0 DHH N/PTCH2 0.014 0.1 0.191 11.0 -0.407 12.0 23.0 DHH N/PTCH1 -0.048 0.17 0.333 1.0 -0.33 59.0 60.0 PIK3CA 0.019 0.003 -9999.0 0.0 -9999.0 0.0 0.0 DHH -0.003 0.12 0.255 4.0 -0.549 11.0 15.0 PTHLH -0.07 0.231 0.483 1.0 -1.05 5.0 6.0 determination of left/right symmetry -0.088 0.195 -9999.0 0.0 -0.429 52.0 52.0 PIK3R1 0.02 0.015 0.255 1.0 -9999.0 0.0 1.0 skeletal system development -0.069 0.228 0.482 1.0 -1.033 5.0 6.0 IHH N/Hhip -0.115 0.239 0.249 8.0 -0.436 84.0 92.0 DHH N/Hhip -0.059 0.191 0.191 12.0 -0.415 54.0 66.0 mol:Cholesterol 0.0 0.0 -9999.0 0.0 -9999.0 0.0 0.0 heart development -0.088 0.195 -9999.0 0.0 -0.429 52.0 52.0 pancreas development -0.074 0.227 0.255 14.0 -0.548 45.0 59.0 HHAT 0.019 0.004 -9999.0 0.0 -9999.0 0.0 0.0 PI3K 0.028 0.017 -9999.0 0.0 -9999.0 0.0 0.0 EntrezGene:84976 0.0 0.0 -9999.0 0.0 -9999.0 0.0 0.0 GAS1 0.018 0.041 0.255 2.0 -0.549 1.0 3.0 somite specification -0.088 0.195 -9999.0 0.0 -0.429 52.0 52.0 SHH Np/Cholesterol/PTCH1 -0.08 0.17 0.325 1.0 -0.316 75.0 76.0 SHH Np/Cholesterol/PTCH2 -0.05 0.118 0.172 9.0 -0.32 37.0 46.0 SHH Np/Cholesterol/Megalin -0.194 0.181 -9999.0 0.0 -0.353 134.0 134.0 SHH -0.069 0.138 -9999.0 0.0 -0.407 36.0 36.0 catabolic process -0.045 0.168 0.287 9.0 -0.344 53.0 62.0 SMO/Vitamin D3 -0.101 0.192 0.385 2.0 -0.394 52.0 54.0 SHH Np/Cholesterol/Hhip -0.099 0.171 0.169 12.0 -0.351 72.0 84.0 LRP2 -0.253 0.274 -9999.0 0.0 -0.549 117.0 117.0 receptor-mediated endocytosis -0.211 0.216 0.279 1.0 -0.548 52.0 53.0 SHH Np/Cholesterol/BOC -0.054 0.114 0.16 4.0 -0.318 38.0 42.0 SHH Np/Cholesterol/CDO -0.053 0.111 0.16 3.0 -0.319 36.0 39.0 mesenchymal cell differentiation 0.099 0.169 0.349 72.0 -0.168 12.0 84.0 mol:Vitamin D3 -0.084 0.172 0.333 3.0 -0.321 69.0 72.0 IHH N/PTCH2 -0.043 0.17 0.24 9.0 -0.366 51.0 60.0 CDON 0.022 0.03 0.255 4.0 -9999.0 0.0 4.0 IHH N/PTCH1 -0.041 0.17 0.358 1.0 -0.348 53.0 54.0 Megalin/LRPAP1 -0.171 0.214 -9999.0 0.0 -0.406 114.0 114.0 PTCH2 0.026 0.059 0.255 10.0 -0.549 1.0 11.0 SHH Np/Cholesterol -0.053 0.107 -9999.0 0.0 -0.316 36.0 36.0 PTCH1 -0.046 0.168 0.288 9.0 -0.345 53.0 62.0 HHIP -0.074 0.228 0.255 14.0 -0.549 45.0 59.0