name nmut n_coding n_flank n_coding_nonsilent fracflank callscheme callscheme_name N_tot nsil_tot nnon_tot rate_sil rate_non TCGA-D3-A1Q1-06A-21D-A196-08 61 58 3 45 4.918033e-02 1 exome+100bp flanks 34834024 12 42 3.444908e-07 1.205718e-06 TCGA-D3-A1Q3-06A-11D-A196-08 61 59 2 40 3.278689e-02 1 exome+100bp flanks 34834024 18 38 5.167362e-07 1.090887e-06 TCGA-D3-A1Q4-06A-11D-A196-08 348 332 16 219 4.597701e-02 1 exome+100bp flanks 34834024 108 209 3.100417e-06 5.999881e-06 TCGA-D3-A1Q5-06A-11D-A196-08 456 441 15 300 3.289474e-02 1 exome+100bp flanks 34834024 135 286 3.875521e-06 8.210364e-06 TCGA-D3-A1Q6-06A-11D-A196-08 1079 1050 29 657 2.687674e-02 0 coding only 34834024 375 626 1.076534e-05 1.797094e-05 TCGA-D3-A1Q7-06A-11D-A19A-08 132 125 7 78 5.303030e-02 1 exome+100bp flanks 34834024 46 73 1.320548e-06 2.095652e-06 TCGA-D3-A1Q8-06A-11D-A19A-08 303 295 8 198 2.640264e-02 0 coding only 34834024 92 185 2.641096e-06 5.310899e-06 TCGA-D3-A1Q9-06A-11D-A19A-08 44 41 3 36 6.818182e-02 1 exome+100bp flanks 34834024 5 35 1.435378e-07 1.004765e-06 TCGA-D3-A1QA-06A-11D-A196-08 575 547 28 352 4.869565e-02 1 exome+100bp flanks 34834024 188 342 5.397022e-06 9.817987e-06 TCGA-D3-A1QB-06A-11D-A19A-08 470 454 16 305 3.404255e-02 1 exome+100bp flanks 34834024 143 287 4.105182e-06 8.239071e-06 TCGA-D3-A2J6-06A-11D-A19A-08 30 28 2 18 6.666667e-02 1 exome+100bp flanks 34834024 10 17 2.870756e-07 4.880286e-07 TCGA-D3-A2J7-06A-11D-A196-08 446 432 14 303 3.139013e-02 1 exome+100bp flanks 34834024 121 292 3.473615e-06 8.382609e-06 TCGA-D3-A2J8-06A-11D-A196-08 835 812 23 522 2.754491e-02 0 coding only 34834024 276 499 7.923288e-06 1.432507e-05 TCGA-D3-A2J9-06A-11D-A196-08 101 97 4 55 3.960396e-02 1 exome+100bp flanks 34834024 40 49 1.148303e-06 1.406671e-06 TCGA-D3-A2JA-06A-11D-A196-08 462 447 15 304 3.246753e-02 1 exome+100bp flanks 34834024 135 289 3.875521e-06 8.296486e-06 TCGA-D3-A2JB-06A-11D-A196-08 21 19 2 17 9.523810e-02 1 exome+100bp flanks 34834024 2 15 5.741513e-08 4.306135e-07 TCGA-D3-A2JC-06A-11D-A19A-08 262 254 8 172 3.053435e-02 1 exome+100bp flanks 34834024 77 167 2.210482e-06 4.794163e-06 TCGA-D3-A2JD-06A-11D-A19A-08 516 501 15 315 2.906977e-02 0 coding only 34834024 178 304 5.109947e-06 8.727100e-06 TCGA-D3-A2JF-06A-11D-A196-08 1822 1758 64 1198 3.512623e-02 1 exome+100bp flanks 34834024 537 1144 1.541596e-05 3.284145e-05 TCGA-D3-A2JG-06A-11D-A196-08 149 143 6 90 4.026846e-02 1 exome+100bp flanks 34834024 51 84 1.464086e-06 2.411435e-06 TCGA-D3-A2JH-06A-11D-A196-08 823 797 26 525 3.159174e-02 1 exome+100bp flanks 34834024 257 498 7.377844e-06 1.429637e-05 TCGA-D3-A2JK-06A-11D-A196-08 376 364 12 241 3.191489e-02 1 exome+100bp flanks 34834024 119 224 3.416200e-06 6.430495e-06 TCGA-D3-A2JL-06A-11D-A196-08 428 412 16 283 3.738318e-02 1 exome+100bp flanks 34834024 123 269 3.531030e-06 7.722335e-06 TCGA-D3-A2JN-06A-11D-A196-08 427 415 12 285 2.810304e-02 0 coding only 34834024 118 271 3.387493e-06 7.779750e-06 TCGA-D3-A2JO-06A-11D-A196-08 796 763 33 520 4.145729e-02 1 exome+100bp flanks 34834024 234 504 6.717570e-06 1.446861e-05 TCGA-D3-A2JP-06A-11D-A19A-08 352 337 15 235 4.261364e-02 1 exome+100bp flanks 34834024 93 223 2.669804e-06 6.401787e-06 TCGA-D3-A3BZ-06A-12D-A196-08 89 82 7 69 7.865169e-02 1 exome+100bp flanks 34834024 13 67 3.731983e-07 1.923407e-06 TCGA-D3-A3C1-06A-12D-A196-08 189 184 5 131 2.645503e-02 0 coding only 34834024 52 129 1.492793e-06 3.703276e-06 TCGA-D3-A3C3-06A-12D-A19A-08 333 314 19 222 5.705706e-02 1 exome+100bp flanks 34834024 86 209 2.468851e-06 5.999881e-06 TCGA-D3-A3C6-06A-12D-A196-08 148 140 8 88 5.405405e-02 1 exome+100bp flanks 34834024 47 82 1.349256e-06 2.354020e-06 TCGA-D3-A3C7-06A-11D-A196-08 1194 1170 24 812 2.010050e-02 0 coding only 34834024 338 774 9.703157e-06 2.221966e-05 TCGA-D3-A3C8-06A-12D-A19A-08 925 892 33 605 3.567568e-02 1 exome+100bp flanks 34834024 277 585 7.951995e-06 1.679393e-05 TCGA-D3-A3CB-06A-11D-A196-08 338 322 16 215 4.733728e-02 1 exome+100bp flanks 34834024 99 205 2.842049e-06 5.885051e-06 TCGA-D3-A3CC-06A-11D-A19A-08 44 40 4 32 9.090909e-02 1 exome+100bp flanks 34834024 7 31 2.009530e-07 8.899345e-07 TCGA-D3-A3CE-06A-11D-A19A-08 50 46 4 38 8.000000e-02 1 exome+100bp flanks 34834024 8 34 2.296605e-07 9.760572e-07 TCGA-D3-A3CF-06A-11D-A196-08 39 38 1 31 2.564103e-02 1 exome+100bp flanks 34834024 6 28 1.722454e-07 8.038118e-07 TCGA-D3-A3ML-06A-11D-A21A-08 1198 1149 49 759 4.090150e-02 1 exome+100bp flanks 34834024 374 721 1.073663e-05 2.069815e-05 TCGA-D3-A3MO-06A-11D-A21A-08 87 83 4 60 4.597701e-02 1 exome+100bp flanks 34834024 21 57 6.028589e-07 1.636331e-06 TCGA-D3-A3MR-06A-11D-A21A-08 1152 1108 44 741 3.819444e-02 1 exome+100bp flanks 34834024 344 705 9.875402e-06 2.023883e-05 TCGA-D3-A3MU-06A-11D-A21A-08 628 605 23 426 3.662420e-02 1 exome+100bp flanks 34834024 171 409 4.908994e-06 1.174139e-05 TCGA-D3-A3MV-06A-11D-A21A-08 693 661 32 416 4.617605e-02 1 exome+100bp flanks 34834024 232 396 6.660155e-06 1.136820e-05 TCGA-D3-A51E-06A-11D-A25O-08 355 349 6 242 1.690141e-02 0 coding only 34834024 101 231 2.899464e-06 6.631447e-06 TCGA-D3-A51F-06A-11D-A25O-08 168 160 8 108 4.761905e-02 1 exome+100bp flanks 34834024 48 105 1.377963e-06 3.014294e-06 TCGA-D3-A51G-06A-11D-A25O-08 1594 1533 61 997 3.826851e-02 1 exome+100bp flanks 34834024 511 946 1.466957e-05 2.715736e-05 TCGA-D3-A51H-06A-12D-A25O-08 78 75 3 48 3.846154e-02 1 exome+100bp flanks 34834024 26 46 7.463967e-07 1.320548e-06 TCGA-D3-A51J-06A-11D-A25O-08 581 566 15 392 2.581756e-02 0 coding only 34834024 161 374 4.621918e-06 1.073663e-05 TCGA-D3-A51K-06A-11D-A25O-08 33 30 3 25 9.090909e-02 1 exome+100bp flanks 34834024 3 25 8.612269e-08 7.176891e-07 TCGA-D3-A51N-06A-11D-A25O-08 124 120 4 89 3.225806e-02 1 exome+100bp flanks 34834024 30 83 8.612269e-07 2.382728e-06 TCGA-D3-A51R-06A-11D-A25O-08 926 899 27 591 2.915767e-02 0 coding only 34834024 300 559 8.612269e-06 1.604753e-05 TCGA-D3-A51T-06A-11D-A25O-08 1516 1451 65 966 4.287599e-02 1 exome+100bp flanks 34834024 453 932 1.300453e-05 2.675545e-05 TCGA-D3-A5GL-06A-11D-A27K-08 544 525 19 367 3.492647e-02 1 exome+100bp flanks 34834024 153 343 4.392257e-06 9.846695e-06 TCGA-D3-A5GN-06A-11D-A27K-08 625 599 26 396 4.160000e-02 1 exome+100bp flanks 34834024 193 379 5.540560e-06 1.088017e-05 TCGA-D3-A5GO-06A-12D-A27K-08 2047 1981 66 1315 3.224231e-02 1 exome+100bp flanks 34834024 638 1237 1.831543e-05 3.551126e-05 TCGA-D3-A5GR-06A-11D-A27K-08 342 332 10 216 2.923977e-02 0 coding only 34834024 111 201 3.186540e-06 5.770221e-06 TCGA-D3-A5GS-06A-11D-A27K-08 520 499 21 329 4.038462e-02 1 exome+100bp flanks 34834024 164 316 4.708041e-06 9.071590e-06 TCGA-D3-A5GU-06A-11D-A27K-08 877 861 16 609 1.824401e-02 0 coding only 34834024 248 583 7.119476e-06 1.673651e-05 TCGA-D9-A148-06A-11D-A19A-08 372 359 13 237 3.494624e-02 1 exome+100bp flanks 34834024 115 225 3.301370e-06 6.459202e-06 TCGA-D9-A149-06A-11D-A196-08 298 290 8 200 2.684564e-02 0 coding only 34834024 84 189 2.411435e-06 5.425730e-06 TCGA-D9-A1JW-06A-11D-A19A-08 1167 1130 37 750 3.170523e-02 1 exome+100bp flanks 34834024 365 714 1.047826e-05 2.049720e-05 TCGA-D9-A1JX-06A-11D-A19A-08 236 231 5 166 2.118644e-02 0 coding only 34834024 62 156 1.779869e-06 4.478380e-06 TCGA-D9-A3Z1-06A-11D-A23B-08 660 632 28 411 4.242424e-02 1 exome+100bp flanks 34834024 211 402 6.057296e-06 1.154044e-05 TCGA-D9-A3Z3-06A-11D-A23B-08 176 165 11 109 6.250000e-02 1 exome+100bp flanks 34834024 55 106 1.578916e-06 3.043002e-06 TCGA-D9-A6E9-06A-12D-A30X-08 234 223 11 169 4.700855e-02 1 exome+100bp flanks 34834024 53 158 1.521501e-06 4.535795e-06 TCGA-D9-A6EA-06A-11D-A30X-08 850 831 19 554 2.235294e-02 0 coding only 34834024 261 533 7.492674e-06 1.530113e-05 TCGA-D9-A6EC-06A-11D-A30X-08 5662 5507 155 3907 2.737549e-02 0 coding only 34834024 1522 3722 4.369291e-05 1.068496e-04 TCGA-D9-A6EG-06A-12D-A32N-08 133 103 30 71 2.255639e-01 1 exome+100bp flanks 34834024 30 69 8.612269e-07 1.980822e-06 TCGA-DA-A1HV-06A-21D-A196-08 1773 1715 58 1132 3.271292e-02 1 exome+100bp flanks 34834024 559 1078 1.604753e-05 3.094675e-05 TCGA-DA-A1HW-06A-11D-A19A-08 425 405 20 264 4.705882e-02 1 exome+100bp flanks 34834024 137 253 3.932936e-06 7.263014e-06 TCGA-DA-A1HY-06A-11D-A19A-08 937 909 28 615 2.988260e-02 0 coding only 34834024 283 591 8.124241e-06 1.696617e-05 TCGA-DA-A1I0-06A-11D-A20D-08 645 618 27 417 4.186047e-02 1 exome+100bp flanks 34834024 195 392 5.597975e-06 1.125337e-05 TCGA-DA-A1I1-06A-12D-A196-08 492 478 14 335 2.845528e-02 0 coding only 34834024 137 320 3.932936e-06 9.186421e-06 TCGA-DA-A1I2-06A-21D-A19A-08 171 164 7 104 4.093567e-02 1 exome+100bp flanks 34834024 57 98 1.636331e-06 2.813341e-06 TCGA-DA-A1I4-06A-11D-A196-08 333 325 8 228 2.402402e-02 0 coding only 34834024 93 219 2.669804e-06 6.286957e-06 TCGA-DA-A1I5-06A-11D-A197-08 567 553 14 373 2.469136e-02 0 coding only 34834024 175 346 5.023824e-06 9.932817e-06 TCGA-DA-A1I7-06A-22D-A197-08 589 572 17 375 2.886248e-02 0 coding only 34834024 185 355 5.310899e-06 1.019119e-05 TCGA-DA-A1I8-06A-11D-A197-08 242 233 9 141 3.719008e-02 1 exome+100bp flanks 34834024 90 133 2.583681e-06 3.818106e-06 TCGA-DA-A1IA-06A-11D-A196-08 458 447 11 282 2.401747e-02 0 coding only 34834024 158 271 4.535795e-06 7.779750e-06 TCGA-DA-A1IB-06A-11D-A196-08 29 26 3 23 1.034483e-01 1 exome+100bp flanks 34834024 3 22 8.612269e-08 6.315664e-07 TCGA-DA-A1IC-06A-11D-A197-08 1269 1224 45 794 3.546099e-02 1 exome+100bp flanks 34834024 408 750 1.171269e-05 2.153067e-05 TCGA-DA-A3F2-06A-11D-A20D-08 13 9 4 7 3.076923e-01 1 exome+100bp flanks 34834024 2 7 5.741513e-08 2.009530e-07 TCGA-DA-A3F3-06A-11D-A20D-08 395 372 23 265 5.822785e-02 1 exome+100bp flanks 34834024 100 249 2.870756e-06 7.148184e-06 TCGA-DA-A3F5-06A-11D-A20D-08 445 426 19 293 4.269663e-02 1 exome+100bp flanks 34834024 127 279 3.645861e-06 8.009411e-06 TCGA-DA-A3F8-06A-11D-A20D-08 1558 1505 53 989 3.401797e-02 1 exome+100bp flanks 34834024 498 941 1.429637e-05 2.701382e-05 TCGA-EB-A44Q-06A-11D-A25O-08 70 67 3 53 4.285714e-02 1 exome+100bp flanks 34834024 13 52 3.731983e-07 1.492793e-06 TCGA-EB-A44R-06A-41D-A25O-08 78 72 6 50 7.692308e-02 1 exome+100bp flanks 34834024 22 50 6.315664e-07 1.435378e-06 TCGA-EB-A5KH-06A-11D-A27K-08 57 55 2 42 3.508772e-02 1 exome+100bp flanks 34834024 13 40 3.731983e-07 1.148303e-06 TCGA-EB-A5SG-06A-11D-A30X-08 382 368 14 240 3.664921e-02 1 exome+100bp flanks 34834024 121 225 3.473615e-06 6.459202e-06 TCGA-EB-A5SH-06A-11D-A30X-08 124 119 5 92 4.032258e-02 1 exome+100bp flanks 34834024 25 89 7.176891e-07 2.554973e-06 TCGA-EB-A5UL-06A-11D-A30X-08 608 592 16 405 2.631579e-02 0 coding only 34834024 179 381 5.138654e-06 1.093758e-05 TCGA-EB-A5UN-06A-11D-A30X-08 944 909 35 623 3.707627e-02 1 exome+100bp flanks 34834024 272 587 7.808458e-06 1.685134e-05 TCGA-EB-A5VV-06A-11D-A32N-08 44 9 35 6 7.954545e-01 2 all capture (no interval list) 65505363 2 5 3.053185e-08 7.632963e-08 TCGA-EB-A6L9-06A-11D-A32N-08 84 38 46 24 5.476190e-01 2 all capture (no interval list) 65505363 14 23 2.137230e-07 3.511163e-07 TCGA-EE-A17X-06A-11D-A197-08 1019 989 30 673 2.944063e-02 0 coding only 34834024 300 643 8.612269e-06 1.845896e-05 TCGA-EE-A17Y-06A-11D-A196-08 218 211 7 141 3.211009e-02 1 exome+100bp flanks 34834024 67 134 1.923407e-06 3.846814e-06 TCGA-EE-A17Z-06A-11D-A196-08 29 29 0 25 0 1 exome+100bp flanks 34834024 4 24 1.148303e-07 6.889816e-07 TCGA-EE-A180-06A-11D-A21A-08 683 656 27 448 3.953148e-02 1 exome+100bp flanks 34834024 198 424 5.684098e-06 1.217201e-05 TCGA-EE-A181-06A-11D-A196-08 3891 3794 97 2511 2.492932e-02 0 coding only 34834024 1221 2406 3.505194e-05 6.907040e-05 TCGA-EE-A182-06A-11D-A196-08 1913 1842 71 1190 3.711448e-02 1 exome+100bp flanks 34834024 628 1129 1.802835e-05 3.241084e-05 TCGA-EE-A183-06A-11D-A196-08 989 958 31 660 3.134479e-02 1 exome+100bp flanks 34834024 276 630 7.923288e-06 1.808577e-05 TCGA-EE-A184-06A-11D-A196-08 357 345 12 248 3.361345e-02 1 exome+100bp flanks 34834024 88 241 2.526266e-06 6.918523e-06 TCGA-EE-A185-06A-11D-A196-08 248 241 7 163 2.822581e-02 0 coding only 34834024 75 151 2.153067e-06 4.334842e-06 TCGA-EE-A20B-06A-11D-A196-08 232 223 9 156 3.879310e-02 1 exome+100bp flanks 34834024 67 146 1.923407e-06 4.191304e-06 TCGA-EE-A20C-06A-11D-A196-08 2703 2614 89 1721 3.292638e-02 1 exome+100bp flanks 34834024 861 1635 2.471721e-05 4.693687e-05 TCGA-EE-A20F-06A-21D-A196-08 626 608 18 399 2.875399e-02 0 coding only 34834024 202 378 5.798928e-06 1.085146e-05 TCGA-EE-A20H-06A-11D-A197-08 759 723 36 502 4.743083e-02 1 exome+100bp flanks 34834024 211 481 6.057296e-06 1.380834e-05 TCGA-EE-A20I-06A-11D-A196-08 28 26 2 18 7.142857e-02 1 exome+100bp flanks 34834024 6 15 1.722454e-07 4.306135e-07 TCGA-EE-A29A-06A-12D-A196-08 330 322 8 213 2.424242e-02 0 coding only 34834024 99 205 2.842049e-06 5.885051e-06 TCGA-EE-A29B-06A-11D-A197-08 703 683 20 472 2.844950e-02 0 coding only 34834024 202 460 5.798928e-06 1.320548e-05 TCGA-EE-A29C-06A-21D-A197-08 538 524 14 359 2.602230e-02 0 coding only 34834024 156 349 4.478380e-06 1.001894e-05 TCGA-EE-A29D-06A-11D-A197-08 4887 4725 162 3080 3.314917e-02 1 exome+100bp flanks 34834024 1578 2919 4.530054e-05 8.379738e-05 TCGA-EE-A29E-06A-11D-A197-08 4585 4435 150 2884 3.271538e-02 1 exome+100bp flanks 34834024 1484 2756 4.260203e-05 7.911805e-05 TCGA-EE-A29G-06A-12D-A196-08 506 492 14 338 2.766798e-02 0 coding only 34834024 147 322 4.220012e-06 9.243836e-06 TCGA-EE-A29H-06A-12D-A197-08 408 392 16 267 3.921569e-02 1 exome+100bp flanks 34834024 122 253 3.502323e-06 7.263014e-06 TCGA-EE-A29L-06A-12D-A196-08 2587 2510 77 1652 2.976421e-02 0 coding only 34834024 820 1570 2.354020e-05 4.507088e-05 TCGA-EE-A29M-06A-11D-A196-08 3001 2892 109 1932 3.632123e-02 1 exome+100bp flanks 34834024 909 1830 2.609518e-05 5.253484e-05 TCGA-EE-A29N-06A-12D-A197-08 827 796 31 533 3.748489e-02 1 exome+100bp flanks 34834024 251 502 7.205599e-06 1.441120e-05 TCGA-EE-A29P-06A-11D-A197-08 403 386 17 250 4.218362e-02 1 exome+100bp flanks 34834024 131 230 3.760691e-06 6.602740e-06 TCGA-EE-A29Q-06A-11D-A197-08 382 366 16 240 4.188482e-02 1 exome+100bp flanks 34834024 119 225 3.416200e-06 6.459202e-06 TCGA-EE-A29R-06A-11D-A197-08 885 851 34 544 3.841808e-02 1 exome+100bp flanks 34834024 291 511 8.353901e-06 1.466957e-05 TCGA-EE-A29S-06A-11D-A197-08 1376 1335 41 879 2.979651e-02 0 coding only 34834024 431 836 1.237296e-05 2.399952e-05 TCGA-EE-A29T-06A-11D-A197-08 492 472 20 328 4.065041e-02 1 exome+100bp flanks 34834024 138 310 3.961644e-06 8.899345e-06 TCGA-EE-A29V-06A-12D-A197-08 1333 1307 26 851 1.950488e-02 0 coding only 34834024 436 811 1.251650e-05 2.328184e-05 TCGA-EE-A29W-06A-11D-A196-08 93 93 0 67 0 0 coding only 34834024 24 66 6.889816e-07 1.894699e-06 TCGA-EE-A29X-06A-11D-A196-08 200 188 12 120 6.000000e-02 1 exome+100bp flanks 34834024 64 114 1.837284e-06 3.272662e-06 TCGA-EE-A2A0-06A-11D-A196-08 509 488 21 356 4.125737e-02 1 exome+100bp flanks 34834024 126 341 3.617153e-06 9.789280e-06 TCGA-EE-A2A1-06A-11D-A197-08 503 478 25 326 4.970179e-02 1 exome+100bp flanks 34834024 148 313 4.248720e-06 8.985468e-06 TCGA-EE-A2A2-06A-11D-A196-08 2111 2037 74 1395 3.505448e-02 1 exome+100bp flanks 34834024 612 1314 1.756903e-05 3.772174e-05 TCGA-EE-A2A5-06A-11D-A197-08 424 411 13 277 3.066038e-02 1 exome+100bp flanks 34834024 132 269 3.789399e-06 7.722335e-06 TCGA-EE-A2A6-06A-11D-A197-08 396 387 9 254 2.272727e-02 0 coding only 34834024 128 246 3.674568e-06 7.062061e-06 TCGA-EE-A2GB-06A-11D-A197-08 840 814 26 557 3.095238e-02 1 exome+100bp flanks 34834024 247 536 7.090768e-06 1.538725e-05 TCGA-EE-A2GC-06A-11D-A197-08 2974 2873 101 1911 3.396100e-02 1 exome+100bp flanks 34834024 907 1829 2.603776e-05 5.250614e-05 TCGA-EE-A2GD-06A-11D-A196-08 717 687 30 468 4.184100e-02 1 exome+100bp flanks 34834024 212 448 6.086004e-06 1.286099e-05 TCGA-EE-A2GE-06A-11D-A196-08 326 315 11 206 3.374233e-02 1 exome+100bp flanks 34834024 102 197 2.928172e-06 5.655390e-06 TCGA-EE-A2GH-06A-11D-A196-08 420 401 19 277 4.523810e-02 1 exome+100bp flanks 34834024 120 257 3.444908e-06 7.377844e-06 TCGA-EE-A2GI-06A-11D-A196-08 2043 1983 60 1313 2.936858e-02 0 coding only 34834024 651 1254 1.868862e-05 3.599929e-05 TCGA-EE-A2GJ-06A-11D-A196-08 1488 1443 45 925 3.024194e-02 1 exome+100bp flanks 34834024 491 882 1.409541e-05 2.532007e-05 TCGA-EE-A2GK-06A-11D-A196-08 4 4 0 4 0 1 exome+100bp flanks 34834024 0 3 0 8.612269e-08 TCGA-EE-A2GL-06A-11D-A196-08 471 457 14 295 2.972399e-02 0 coding only 34834024 158 282 4.535795e-06 8.095533e-06 TCGA-EE-A2GM-06B-11D-A196-08 930 898 32 599 3.440860e-02 1 exome+100bp flanks 34834024 283 571 8.124241e-06 1.639202e-05 TCGA-EE-A2GN-06A-11D-A196-08 554 534 20 375 3.610108e-02 1 exome+100bp flanks 34834024 149 357 4.277427e-06 1.024860e-05 TCGA-EE-A2GO-06A-11D-A196-08 2601 2510 91 1599 3.498654e-02 1 exome+100bp flanks 34834024 861 1520 2.471721e-05 4.363550e-05 TCGA-EE-A2GP-06A-11D-A197-08 806 786 20 517 2.481390e-02 0 coding only 34834024 262 491 7.521382e-06 1.409541e-05 TCGA-EE-A2GR-06A-11D-A197-08 2109 2047 62 1332 2.939782e-02 0 coding only 34834024 695 1270 1.995176e-05 3.645861e-05 TCGA-EE-A2GS-06A-12D-A197-08 442 417 25 296 5.656109e-02 1 exome+100bp flanks 34834024 110 288 3.157832e-06 8.267779e-06 TCGA-EE-A2GT-06A-12D-A197-08 451 438 13 295 2.882483e-02 0 coding only 34834024 135 279 3.875521e-06 8.009411e-06 TCGA-EE-A2GU-06A-11D-A196-08 767 736 31 496 4.041721e-02 1 exome+100bp flanks 34834024 233 471 6.688863e-06 1.352126e-05 TCGA-EE-A2M5-06A-12D-A197-08 2565 2488 77 1653 3.001949e-02 1 exome+100bp flanks 34834024 808 1566 2.319571e-05 4.495605e-05 TCGA-EE-A2M6-06A-12D-A197-08 695 680 15 465 2.158273e-02 0 coding only 34834024 208 443 5.971173e-06 1.271745e-05 TCGA-EE-A2M7-06A-11D-A197-08 90 86 4 53 4.444444e-02 1 exome+100bp flanks 34834024 32 50 9.186421e-07 1.435378e-06 TCGA-EE-A2M8-06A-12D-A196-08 148 143 5 97 3.378378e-02 1 exome+100bp flanks 34834024 43 93 1.234425e-06 2.669804e-06 TCGA-EE-A2MC-06A-12D-A197-08 993 961 32 642 3.222558e-02 1 exome+100bp flanks 34834024 294 607 8.440024e-06 1.742549e-05 TCGA-EE-A2MD-06A-11D-A197-08 2193 2119 74 1394 3.374373e-02 1 exome+100bp flanks 34834024 690 1314 1.980822e-05 3.772174e-05 TCGA-EE-A2ME-06A-11D-A197-08 79 77 2 50 2.531646e-02 0 coding only 34834024 26 45 7.463967e-07 1.291840e-06 TCGA-EE-A2MF-06A-11D-A21A-08 973 935 38 628 3.905447e-02 1 exome+100bp flanks 34834024 291 608 8.353901e-06 1.745420e-05 TCGA-EE-A2MG-06A-11D-A197-08 283 271 12 187 4.240283e-02 1 exome+100bp flanks 34834024 81 182 2.325313e-06 5.224777e-06 TCGA-EE-A2MH-06A-11D-A197-08 202 190 12 116 5.940594e-02 1 exome+100bp flanks 34834024 72 106 2.066945e-06 3.043002e-06 TCGA-EE-A2MI-06A-11D-A197-08 1390 1339 51 885 3.669065e-02 1 exome+100bp flanks 34834024 434 838 1.245908e-05 2.405694e-05 TCGA-EE-A2MJ-06A-11D-A197-08 2987 2892 95 1910 3.180449e-02 1 exome+100bp flanks 34834024 944 1822 2.709994e-05 5.230518e-05 TCGA-EE-A2MK-06A-11D-A196-08 380 369 11 243 2.894737e-02 0 coding only 34834024 121 235 3.473615e-06 6.746278e-06 TCGA-EE-A2ML-06A-11D-A197-08 736 707 29 473 3.940217e-02 1 exome+100bp flanks 34834024 224 455 6.430495e-06 1.306194e-05 TCGA-EE-A2MM-06A-11D-A196-08 728 699 29 457 3.983516e-02 1 exome+100bp flanks 34834024 232 442 6.660155e-06 1.268874e-05 TCGA-EE-A2MN-06A-11D-A197-08 195 188 7 117 3.589744e-02 1 exome+100bp flanks 34834024 70 112 2.009530e-06 3.215247e-06 TCGA-EE-A2MP-06A-11D-A197-08 371 360 11 255 2.964960e-02 0 coding only 34834024 100 243 2.870756e-06 6.975938e-06 TCGA-EE-A2MQ-06A-11D-A197-08 341 332 9 225 2.639296e-02 0 coding only 34834024 105 212 3.014294e-06 6.086004e-06 TCGA-EE-A2MR-06A-11D-A196-08 6567 6412 155 3963 2.360286e-02 0 coding only 34834024 2336 3756 6.706087e-05 1.078256e-04 TCGA-EE-A2MS-06A-11D-A197-08 3733 3620 113 2335 3.027056e-02 1 exome+100bp flanks 34834024 1221 2232 3.505194e-05 6.407528e-05 TCGA-EE-A2MT-06A-11D-A197-08 1173 1137 36 764 3.069054e-02 1 exome+100bp flanks 34834024 351 719 1.007636e-05 2.064074e-05 TCGA-EE-A2MU-06A-21D-A196-08 882 850 32 574 3.628118e-02 1 exome+100bp flanks 34834024 265 551 7.607505e-06 1.581787e-05 TCGA-EE-A3AA-06A-11D-A196-08 2279 2224 55 1470 2.413339e-02 0 coding only 34834024 729 1407 2.092781e-05 4.039154e-05 TCGA-EE-A3AB-06A-11D-A196-08 862 843 19 587 2.204176e-02 0 coding only 34834024 246 565 7.062061e-06 1.621977e-05 TCGA-EE-A3AC-06A-11D-A196-08 1304 1266 38 842 2.914110e-02 0 coding only 34834024 401 806 1.151173e-05 2.313830e-05 TCGA-EE-A3AD-06A-11D-A196-08 577 556 21 358 3.639515e-02 1 exome+100bp flanks 34834024 192 344 5.511852e-06 9.875402e-06 TCGA-EE-A3AE-06A-11D-A196-08 1861 1791 70 1171 3.761419e-02 1 exome+100bp flanks 34834024 595 1122 1.708100e-05 3.220989e-05 TCGA-EE-A3AF-06A-11D-A196-08 1264 1233 31 855 2.452532e-02 0 coding only 34834024 356 808 1.021989e-05 2.319571e-05 TCGA-EE-A3AG-06A-31D-A196-08 2176 2111 65 1358 2.987132e-02 0 coding only 34834024 722 1284 2.072686e-05 3.686051e-05 TCGA-EE-A3AH-06A-11D-A196-08 496 484 12 340 2.419355e-02 0 coding only 34834024 140 319 4.019059e-06 9.157713e-06 TCGA-EE-A3J3-06A-11D-A20D-08 230 220 10 143 4.347826e-02 1 exome+100bp flanks 34834024 75 137 2.153067e-06 3.932936e-06 TCGA-EE-A3J4-06A-11D-A20D-08 416 393 23 283 5.528846e-02 1 exome+100bp flanks 34834024 104 270 2.985587e-06 7.751042e-06 TCGA-EE-A3J5-06A-11D-A20D-08 2763 2662 101 1810 3.655447e-02 1 exome+100bp flanks 34834024 813 1729 2.333925e-05 4.963538e-05 TCGA-EE-A3J7-06A-11D-A20D-08 1313 1279 34 836 2.589490e-02 0 coding only 34834024 420 792 1.205718e-05 2.273639e-05 TCGA-EE-A3J8-06A-11D-A20D-08 360 338 22 226 6.111111e-02 1 exome+100bp flanks 34834024 107 213 3.071709e-06 6.114711e-06 TCGA-EE-A3JA-06A-11D-A20D-08 1328 1268 60 818 4.518072e-02 1 exome+100bp flanks 34834024 418 777 1.199976e-05 2.230578e-05 TCGA-EE-A3JB-06A-11D-A21A-08 811 781 30 524 3.699137e-02 1 exome+100bp flanks 34834024 248 500 7.119476e-06 1.435378e-05 TCGA-EE-A3JD-06A-11D-A20D-08 3921 3792 129 2500 3.289977e-02 1 exome+100bp flanks 34834024 1235 2391 3.545384e-05 6.863979e-05 TCGA-EE-A3JE-06A-11D-A20D-08 368 361 7 250 1.902174e-02 0 coding only 34834024 107 241 3.071709e-06 6.918523e-06 TCGA-EE-A3JH-06A-11D-A21A-08 252 240 12 154 4.761905e-02 1 exome+100bp flanks 34834024 80 147 2.296605e-06 4.220012e-06 TCGA-EE-A3JI-06A-11D-A21A-08 1540 1487 53 1040 3.441558e-02 1 exome+100bp flanks 34834024 422 985 1.211459e-05 2.827695e-05 TCGA-ER-A193-06A-12D-A197-08 2461 2391 70 1645 2.844372e-02 0 coding only 34834024 712 1567 2.043979e-05 4.498475e-05 TCGA-ER-A195-06A-11D-A196-08 329 321 8 210 2.431611e-02 0 coding only 34834024 103 197 2.956879e-06 5.655390e-06 TCGA-ER-A197-06A-32D-A197-08 58 58 0 47 0 0 coding only 34834024 11 46 3.157832e-07 1.320548e-06 TCGA-ER-A198-06A-11D-A196-08 605 590 15 402 2.479339e-02 0 coding only 34834024 180 381 5.167362e-06 1.093758e-05 TCGA-ER-A199-06A-11D-A197-08 359 344 15 237 4.178273e-02 1 exome+100bp flanks 34834024 104 229 2.985587e-06 6.574032e-06 TCGA-ER-A19A-06A-21D-A197-08 553 535 18 348 3.254973e-02 1 exome+100bp flanks 34834024 175 331 5.023824e-06 9.502204e-06 TCGA-ER-A19B-06A-11D-A196-08 144 141 3 105 2.083333e-02 0 coding only 34834024 35 102 1.004765e-06 2.928172e-06 TCGA-ER-A19C-06A-11D-A196-08 124 117 7 67 5.645161e-02 1 exome+100bp flanks 34834024 47 65 1.349256e-06 1.865992e-06 TCGA-ER-A19D-06A-11D-A197-08 601 579 22 370 3.660566e-02 1 exome+100bp flanks 34834024 195 350 5.597975e-06 1.004765e-05 TCGA-ER-A19E-06A-11D-A197-08 583 567 16 390 2.744425e-02 0 coding only 34834024 168 378 4.822871e-06 1.085146e-05 TCGA-ER-A19F-06A-11D-A196-08 1275 1222 53 828 4.156863e-02 1 exome+100bp flanks 34834024 367 789 1.053568e-05 2.265027e-05 TCGA-ER-A19G-06A-11D-A196-08 681 653 28 424 4.111601e-02 1 exome+100bp flanks 34834024 218 410 6.258249e-06 1.177010e-05 TCGA-ER-A19H-06A-12D-A196-08 348 337 11 221 3.160920e-02 1 exome+100bp flanks 34834024 110 203 3.157832e-06 5.827636e-06 TCGA-ER-A19J-06A-11D-A196-08 287 272 15 183 5.226481e-02 1 exome+100bp flanks 34834024 84 173 2.411435e-06 4.966409e-06 TCGA-ER-A19L-06A-12D-A197-08 77 73 4 48 5.194805e-02 1 exome+100bp flanks 34834024 22 43 6.315664e-07 1.234425e-06 TCGA-ER-A19M-06A-61D-A23B-08 625 606 19 388 3.040000e-02 1 exome+100bp flanks 34834024 209 368 5.999881e-06 1.056438e-05 TCGA-ER-A19N-06A-11D-A197-08 630 604 26 411 4.126984e-02 1 exome+100bp flanks 34834024 179 391 5.138654e-06 1.122466e-05 TCGA-ER-A19O-06A-11D-A197-08 224 214 10 147 4.464286e-02 1 exome+100bp flanks 34834024 63 138 1.808577e-06 3.961644e-06 TCGA-ER-A19P-06A-11D-A196-08 2204 2148 56 1584 2.540835e-02 0 coding only 34834024 532 1510 1.527242e-05 4.334842e-05 TCGA-ER-A19Q-06A-11D-A197-08 154 153 1 105 6.493506e-03 0 coding only 34834024 46 103 1.320548e-06 2.956879e-06 TCGA-ER-A19S-06A-11D-A196-08 276 266 10 184 3.623188e-02 1 exome+100bp flanks 34834024 77 175 2.210482e-06 5.023824e-06 TCGA-ER-A19T-06A-11D-A19A-08 61 59 2 48 3.278689e-02 1 exome+100bp flanks 34834024 11 45 3.157832e-07 1.291840e-06 TCGA-ER-A19W-06A-41D-A23B-08 461 447 14 282 3.036876e-02 1 exome+100bp flanks 34834024 151 268 4.334842e-06 7.693627e-06 TCGA-ER-A1A1-06A-11D-A197-08 326 320 6 220 1.840491e-02 0 coding only 34834024 93 207 2.669804e-06 5.942466e-06 TCGA-ER-A2NC-06A-11D-A197-08 514 490 24 321 4.669261e-02 1 exome+100bp flanks 34834024 158 305 4.535795e-06 8.755807e-06 TCGA-ER-A2ND-06A-11D-A196-08 135 128 7 95 5.185185e-02 1 exome+100bp flanks 34834024 33 90 9.473496e-07 2.583681e-06 TCGA-ER-A2NE-06A-21D-A196-08 180 173 7 125 3.888889e-02 1 exome+100bp flanks 34834024 46 118 1.320548e-06 3.387493e-06 TCGA-ER-A2NF-06A-11D-A19A-08 46 43 3 29 6.521739e-02 1 exome+100bp flanks 34834024 14 28 4.019059e-07 8.038118e-07 TCGA-ER-A2NG-06A-11D-A196-08 332 314 18 216 5.421687e-02 1 exome+100bp flanks 34834024 98 206 2.813341e-06 5.913758e-06 TCGA-ER-A2NH-06A-11D-A196-08 397 386 11 258 2.770781e-02 0 coding only 34834024 125 247 3.588446e-06 7.090768e-06 TCGA-ER-A3ES-06A-11D-A20D-08 44 36 8 31 1.818182e-01 1 exome+100bp flanks 34834024 5 30 1.435378e-07 8.612269e-07 TCGA-ER-A3ET-06A-11D-A20D-08 127 121 6 95 4.724409e-02 1 exome+100bp flanks 34834024 25 93 7.176891e-07 2.669804e-06 TCGA-ER-A3EV-06A-11D-A20D-08 123 119 4 97 3.252033e-02 1 exome+100bp flanks 34834024 19 92 5.454437e-07 2.641096e-06 TCGA-ER-A3PL-06A-11D-A23B-08 488 470 18 302 3.688525e-02 1 exome+100bp flanks 34834024 160 280 4.593210e-06 8.038118e-06 TCGA-ER-A42K-06A-11D-A24R-08 252 240 12 163 4.761905e-02 1 exome+100bp flanks 34834024 74 154 2.124360e-06 4.420965e-06 TCGA-ER-A42L-06A-11D-A24R-08 1294 1241 53 814 4.095827e-02 1 exome+100bp flanks 34834024 407 788 1.168398e-05 2.262156e-05 TCGA-FR-A3YN-06A-11D-A23B-08 743 715 28 470 3.768506e-02 1 exome+100bp flanks 34834024 238 452 6.832400e-06 1.297582e-05 TCGA-FR-A3YO-06A-11D-A23B-08 1112 1062 50 701 4.496403e-02 1 exome+100bp flanks 34834024 349 659 1.001894e-05 1.891829e-05 TCGA-FR-A44A-06A-11D-A24R-08 398 388 10 248 2.512563e-02 0 coding only 34834024 133 238 3.818106e-06 6.832400e-06 TCGA-FR-A69P-06A-21D-A30X-08 286 270 16 193 5.594406e-02 1 exome+100bp flanks 34834024 76 184 2.181775e-06 5.282192e-06 TCGA-FS-A1YW-06A-11D-A197-08 213 197 16 136 7.511737e-02 1 exome+100bp flanks 34834024 59 131 1.693746e-06 3.760691e-06 TCGA-FS-A1YX-06A-11D-A197-08 33 30 3 26 9.090909e-02 1 exome+100bp flanks 34834024 4 25 1.148303e-07 7.176891e-07 TCGA-FS-A1YY-06A-11D-A197-08 263 253 10 164 3.802281e-02 1 exome+100bp flanks 34834024 86 156 2.468851e-06 4.478380e-06 TCGA-FS-A1Z0-06A-11D-A197-08 343 336 7 229 2.040816e-02 0 coding only 34834024 103 220 2.956879e-06 6.315664e-06 TCGA-FS-A1Z3-06A-11D-A197-08 1326 1282 44 870 3.318250e-02 1 exome+100bp flanks 34834024 392 836 1.125337e-05 2.399952e-05 TCGA-FS-A1Z4-06A-11D-A197-08 57 54 3 40 5.263158e-02 1 exome+100bp flanks 34834024 12 37 3.444908e-07 1.062180e-06 TCGA-FS-A1Z7-06A-11D-A197-08 243 232 11 156 4.526749e-02 1 exome+100bp flanks 34834024 74 151 2.124360e-06 4.334842e-06 TCGA-FS-A1ZA-06A-11D-A197-08 1524 1481 43 1003 2.821522e-02 0 coding only 34834024 457 956 1.311936e-05 2.744443e-05 TCGA-FS-A1ZB-06A-12D-A197-08 307 301 6 200 1.954397e-02 0 coding only 34834024 94 191 2.698511e-06 5.483145e-06 TCGA-FS-A1ZC-06A-11D-A197-08 921 888 33 572 3.583062e-02 1 exome+100bp flanks 34834024 309 545 8.870638e-06 1.564562e-05 TCGA-FS-A1ZD-06A-11D-A197-08 328 317 11 224 3.353659e-02 1 exome+100bp flanks 34834024 88 216 2.526266e-06 6.200834e-06 TCGA-FS-A1ZE-06A-11D-A197-08 187 179 8 124 4.278075e-02 1 exome+100bp flanks 34834024 50 117 1.435378e-06 3.358785e-06 TCGA-FS-A1ZF-06A-12D-A197-08 264 251 13 166 4.924242e-02 1 exome+100bp flanks 34834024 83 160 2.382728e-06 4.593210e-06 TCGA-FS-A1ZG-06A-11D-A197-08 48 46 2 31 4.166667e-02 1 exome+100bp flanks 34834024 15 31 4.306135e-07 8.899345e-07 TCGA-FS-A1ZH-06A-11D-A197-08 42 39 3 29 7.142857e-02 1 exome+100bp flanks 34834024 10 27 2.870756e-07 7.751042e-07 TCGA-FS-A1ZJ-06A-12D-A197-08 88 80 8 59 9.090909e-02 1 exome+100bp flanks 34834024 20 58 5.741513e-07 1.665039e-06 TCGA-FS-A1ZK-06A-11D-A197-08 2071 2019 52 1315 2.510864e-02 0 coding only 34834024 662 1256 1.900441e-05 3.605670e-05 TCGA-FS-A1ZM-06A-12D-A197-08 323 313 10 213 3.095975e-02 1 exome+100bp flanks 34834024 95 199 2.727219e-06 5.712805e-06 TCGA-FS-A1ZP-06A-11D-A197-08 547 538 9 350 1.645338e-02 0 coding only 34834024 181 336 5.196069e-06 9.645742e-06 TCGA-FS-A1ZQ-06A-11D-A197-08 653 633 20 411 3.062787e-02 1 exome+100bp flanks 34834024 214 389 6.143419e-06 1.116724e-05 TCGA-FS-A1ZR-06A-21D-A197-08 177 172 5 119 2.824859e-02 0 coding only 34834024 50 117 1.435378e-06 3.358785e-06 TCGA-FS-A1ZS-06A-12D-A197-08 369 359 10 222 2.710027e-02 0 coding only 34834024 126 209 3.617153e-06 5.999881e-06 TCGA-FS-A1ZT-06A-11D-A197-08 225 212 13 148 5.777778e-02 1 exome+100bp flanks 34834024 62 133 1.779869e-06 3.818106e-06 TCGA-FS-A1ZU-06A-12D-A196-08 60 58 2 42 3.333333e-02 1 exome+100bp flanks 34834024 15 41 4.306135e-07 1.177010e-06 TCGA-FS-A1ZW-06A-12D-A197-08 831 808 23 551 2.767750e-02 0 coding only 34834024 248 520 7.119476e-06 1.492793e-05 TCGA-FS-A1ZY-06A-11D-A197-08 40 39 1 27 2.500000e-02 1 exome+100bp flanks 34834024 11 26 3.157832e-07 7.463967e-07 TCGA-FS-A1ZZ-06A-11D-A197-08 1995 1918 77 1239 3.859649e-02 1 exome+100bp flanks 34834024 641 1168 1.840155e-05 3.353044e-05 TCGA-FS-A4F0-06A-11D-A24R-08 653 642 11 458 1.684533e-02 0 coding only 34834024 180 431 5.167362e-06 1.237296e-05 TCGA-FS-A4F4-06A-12D-A25O-08 60 54 6 38 1.000000e-01 1 exome+100bp flanks 34834024 16 37 4.593210e-07 1.062180e-06 TCGA-FS-A4F5-06A-11D-A25O-08 972 943 29 648 2.983539e-02 0 coding only 34834024 276 622 7.923288e-06 1.785611e-05 TCGA-FS-A4F8-06A-11D-A25O-08 232 223 9 158 3.879310e-02 1 exome+100bp flanks 34834024 58 154 1.665039e-06 4.420965e-06 TCGA-FS-A4F9-06A-11D-A24R-08 580 558 22 378 3.793103e-02 1 exome+100bp flanks 34834024 171 360 4.908994e-06 1.033472e-05 TCGA-FS-A4FB-06A-11D-A25O-08 243 231 12 163 4.938272e-02 1 exome+100bp flanks 34834024 66 154 1.894699e-06 4.420965e-06 TCGA-FS-A4FC-06A-11D-A24R-08 909 887 22 607 2.420242e-02 0 coding only 34834024 272 587 7.808458e-06 1.685134e-05 TCGA-FS-A4FD-06A-11D-A25O-08 583 559 24 380 4.116638e-02 1 exome+100bp flanks 34834024 172 366 4.937701e-06 1.050697e-05 TCGA-FW-A3I3-06A-11D-A21A-08 93 86 7 59 7.526882e-02 1 exome+100bp flanks 34834024 26 58 7.463967e-07 1.665039e-06 TCGA-FW-A3R5-06A-11D-A23B-08 25922 25102 820 16083 3.163336e-02 1 exome+100bp flanks 34834024 8634 15327 2.478611e-04 4.400008e-04 TCGA-FW-A3TU-06A-11D-A23B-08 1003 971 32 642 3.190429e-02 1 exome+100bp flanks 34834024 315 607 9.042883e-06 1.742549e-05 TCGA-FW-A3TV-06A-11D-A23B-08 436 418 18 277 4.128440e-02 1 exome+100bp flanks 34834024 138 266 3.961644e-06 7.636212e-06 TCGA-FW-A5DY-06A-11D-A30X-08 307 298 9 201 2.931596e-02 0 coding only 34834024 92 196 2.641096e-06 5.626683e-06 TCGA-GF-A3OT-06A-23D-A23B-08 706 681 25 450 3.541076e-02 1 exome+100bp flanks 34834024 221 423 6.344372e-06 1.214330e-05 TCGA-GF-A4EO-06A-12D-A24R-08 315 306 9 211 2.857143e-02 0 coding only 34834024 92 204 2.641096e-06 5.856343e-06 TCGA-GF-A6C8-06A-12D-A30X-08 489 477 12 323 2.453988e-02 0 coding only 34834024 150 314 4.306135e-06 9.014175e-06 TCGA-GF-A6C9-06A-11D-A30X-08 4362 4248 114 2764 2.613480e-02 0 coding only 34834024 1420 2647 4.076474e-05 7.598892e-05 TCGA-GN-A262-06A-11D-A196-08 459 445 14 300 3.050109e-02 1 exome+100bp flanks 34834024 141 289 4.047767e-06 8.296486e-06 TCGA-GN-A264-06A-11D-A196-08 64 60 4 47 6.250000e-02 1 exome+100bp flanks 34834024 13 45 3.731983e-07 1.291840e-06 TCGA-GN-A265-06A-21D-A197-08 339 329 10 239 2.949853e-02 0 coding only 34834024 89 234 2.554973e-06 6.717570e-06 TCGA-GN-A266-06A-11D-A197-08 5025 4889 136 3196 2.706468e-02 0 coding only 34834024 1625 3037 4.664979e-05 8.718487e-05 TCGA-GN-A267-06A-21D-A196-08 553 529 24 345 4.339964e-02 1 exome+100bp flanks 34834024 180 324 5.167362e-06 9.301251e-06 TCGA-GN-A268-06A-11D-A196-08 441 427 14 293 3.174603e-02 1 exome+100bp flanks 34834024 131 274 3.760691e-06 7.865873e-06 TCGA-GN-A26A-06A-11D-A19A-08 428 413 15 279 3.504673e-02 1 exome+100bp flanks 34834024 124 261 3.559738e-06 7.492674e-06 TCGA-GN-A26D-06A-11D-A19A-08 62 60 2 47 3.225806e-02 1 exome+100bp flanks 34834024 13 44 3.731983e-07 1.263133e-06 TCGA-GN-A4U3-06A-11D-A32N-08 440 398 42 260 9.545455e-02 1 exome+100bp flanks 34834024 133 253 3.818106e-06 7.263014e-06 TCGA-GN-A4U4-06A-11D-A32N-08 925 846 79 571 8.540541e-02 1 exome+100bp flanks 34834024 265 547 7.607505e-06 1.570304e-05 TCGA-GN-A4U7-06A-21D-A32N-08 380 335 45 218 1.184211e-01 1 exome+100bp flanks 34834024 106 206 3.043002e-06 5.913758e-06 TCGA-GN-A4U8-06A-11D-A32N-08 574 479 95 337 1.655052e-01 1 exome+100bp flanks 34834024 135 323 3.875521e-06 9.272543e-06 TCGA-GN-A4U9-06A-11D-A32N-08 119 84 35 64 2.941176e-01 1 exome+100bp flanks 34834024 18 62 5.167362e-07 1.779869e-06 TCGA-OD-A75X-06A-12D-A32N-08 1345 1284 61 871 4.535316e-02 1 exome+100bp flanks 34834024 394 827 1.131078e-05 2.374116e-05 TCGA-QB-A6FS-06A-11D-A30X-08 1502 1455 47 966 3.129161e-02 1 exome+100bp flanks 34834024 462 917 1.326289e-05 2.632484e-05 TCGA-RP-A690-06A-11D-A30X-08 22 19 3 15 1.363636e-01 1 exome+100bp flanks 34834024 4 14 1.148303e-07 4.019059e-07 TCGA-RP-A693-06A-13D-A30X-08 1014 990 24 682 2.366864e-02 0 coding only 34834024 295 650 8.468732e-06 1.865992e-05 TCGA-RP-A694-06A-11D-A30X-08 896 861 35 576 3.906250e-02 1 exome+100bp flanks 34834024 271 541 7.779750e-06 1.553079e-05 TCGA-RP-A695-06A-11D-A30X-08 1101 1058 43 715 3.905540e-02 1 exome+100bp flanks 34834024 321 682 9.215128e-06 1.957856e-05