name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-B7-5816-01A-21D-1600-08	1533	1533	0	1180	0	0	coding only	34834024	353	1180	1.013377e-05	3.387493e-05
TCGA-B7-5818-01A-11D-1600-08	464	464	0	351	0	0	coding only	34834024	113	351	3.243955e-06	1.007636e-05
TCGA-BR-4183-01A-02D-1126-08	70	69	1	51	1.428571e-02	0	coding only	34834024	18	51	5.167362e-07	1.464086e-06
TCGA-BR-4184-01A-01D-1126-08	4616	4613	3	3375	6.499133e-04	0	coding only	34834024	1238	3375	3.553997e-05	9.688803e-05
TCGA-BR-4187-01A-01D-1126-08	37	36	1	26	2.702703e-02	0	coding only	34834024	10	26	2.870756e-07	7.463967e-07
TCGA-BR-4188-01A-01D-1126-08	85	85	0	65	0	0	coding only	34834024	20	65	5.741513e-07	1.865992e-06
TCGA-BR-4191-01A-02D-1126-08	223	222	1	176	4.484305e-03	0	coding only	34834024	46	176	1.320548e-06	5.052531e-06
TCGA-BR-4201-01A-01D-1126-08	1648	1647	1	1238	6.067961e-04	0	coding only	34834024	409	1238	1.174139e-05	3.553997e-05
TCGA-BR-4253-01A-01D-1126-08	99	99	0	75	0	0	coding only	34834024	24	75	6.889816e-07	2.153067e-06
TCGA-BR-4255-01A-01D-1126-08	70	70	0	46	0	0	coding only	34834024	24	46	6.889816e-07	1.320548e-06
TCGA-BR-4256-01A-01D-1126-08	1170	1168	2	859	1.709402e-03	0	coding only	34834024	309	859	8.870638e-06	2.465980e-05
TCGA-BR-4257-01A-01D-1126-08	1273	1272	1	911	7.855460e-04	0	coding only	34834024	361	911	1.036343e-05	2.615259e-05
TCGA-BR-4267-01A-01D-1126-08	103	103	0	78	0	0	coding only	34834024	25	78	7.176891e-07	2.239190e-06
TCGA-BR-4279-01A-01D-1126-08	57	57	0	36	0	0	coding only	34834024	21	36	6.028589e-07	1.033472e-06
TCGA-BR-4280-01A-01D-1126-08	881	880	1	693	1.135074e-03	0	coding only	34834024	187	693	5.368315e-06	1.989434e-05
TCGA-BR-4292-01A-01D-1126-08	1661	1659	2	1256	1.204094e-03	0	coding only	34834024	403	1256	1.156915e-05	3.605670e-05
TCGA-BR-4294-01A-01D-1126-08	34	34	0	28	0	0	coding only	34834024	6	28	1.722454e-07	8.038118e-07
TCGA-BR-4357-01A-01D-1158-08	283	283	0	216	0	0	coding only	34834024	67	216	1.923407e-06	6.200834e-06
TCGA-BR-4361-01A-01D-1158-08	3373	3372	1	2500	2.964720e-04	0	coding only	34834024	872	2500	2.503300e-05	7.176891e-05
TCGA-BR-4362-01A-01D-1158-08	2065	2065	0	1588	0	0	coding only	34834024	477	1588	1.369351e-05	4.558761e-05
TCGA-BR-4363-01A-01D-1158-08	693	693	0	536	0	0	coding only	34834024	157	536	4.507088e-06	1.538725e-05
TCGA-BR-4366-01A-01D-1158-08	166	166	0	123	0	0	coding only	34834024	43	123	1.234425e-06	3.531030e-06
TCGA-BR-4368-01A-01D-1158-08	1642	1642	0	1221	0	0	coding only	34834024	421	1221	1.208588e-05	3.505194e-05
TCGA-BR-4369-01A-01D-1158-08	200	200	0	148	0	0	coding only	34834024	52	148	1.492793e-06	4.248720e-06
TCGA-BR-4370-01A-01D-1158-08	1334	1334	0	1000	0	0	coding only	34834024	334	1000	9.588327e-06	2.870756e-05
TCGA-BR-4371-01A-01D-1158-08	182	182	0	131	0	0	coding only	34834024	51	131	1.464086e-06	3.760691e-06
TCGA-BR-6452-01A-12D-1800-08	8772	8771	1	6501	1.139991e-04	0	coding only	34834024	2270	6501	6.516617e-05	1.866279e-04
TCGA-BR-6453-01A-11D-1800-08	221	221	0	161	0	0	coding only	34834024	60	161	1.722454e-06	4.621918e-06
TCGA-BR-6454-01A-11D-1800-08	176	176	0	133	0	0	coding only	34834024	43	133	1.234425e-06	3.818106e-06
TCGA-BR-6455-01A-11D-1800-08	114	114	0	76	0	0	coding only	34834024	38	76	1.090887e-06	2.181775e-06
TCGA-BR-6456-01A-11D-1800-08	51	51	0	37	0	0	coding only	34834024	14	37	4.019059e-07	1.062180e-06
TCGA-BR-6457-01A-21D-1800-08	142	142	0	106	0	0	coding only	34834024	36	106	1.033472e-06	3.043002e-06
TCGA-BR-6458-01A-11D-1800-08	344	344	0	258	0	0	coding only	34834024	86	258	2.468851e-06	7.406552e-06
TCGA-BR-6563-01A-13D-2053-08	86	86	0	66	0	0	coding only	34834024	20	66	5.741513e-07	1.894699e-06
TCGA-BR-6564-01A-12D-1882-08	42	42	0	30	0	0	coding only	34834024	12	30	3.444908e-07	8.612269e-07
TCGA-BR-6565-01A-11D-1800-08	169	169	0	134	0	0	coding only	34834024	35	134	1.004765e-06	3.846814e-06
TCGA-BR-6566-01A-11D-1800-08	1175	1172	3	875	2.553191e-03	0	coding only	34834024	297	875	8.526147e-06	2.511912e-05
TCGA-BR-6705-01A-12D-1882-08	120	120	0	93	0	0	coding only	34834024	27	93	7.751042e-07	2.669804e-06
TCGA-BR-6706-01A-11D-1882-08	256	256	0	201	0	0	coding only	34834024	55	201	1.578916e-06	5.770221e-06
TCGA-BR-6707-01A-11D-1882-08	80	80	0	62	0	0	coding only	34834024	18	62	5.167362e-07	1.779869e-06
TCGA-BR-6710-01A-11D-1882-08	1	1	0	1	0	0	coding only	34834024	0	1	0	2.870756e-08
TCGA-BR-6801-01A-11D-1882-08	58	58	0	40	0	0	coding only	34834024	18	40	5.167362e-07	1.148303e-06
TCGA-BR-6802-01A-11D-1882-08	583	583	0	422	0	0	coding only	34834024	161	422	4.621918e-06	1.211459e-05
TCGA-BR-6803-01A-11D-1882-08	20	20	0	16	0	0	coding only	34834024	4	16	1.148303e-07	4.593210e-07
TCGA-BR-6852-01A-11D-1882-08	1377	1375	2	1043	1.452433e-03	0	coding only	34834024	332	1043	9.530912e-06	2.994199e-05
TCGA-BR-7196-01A-11D-2053-08	84	84	0	61	0	0	coding only	34834024	23	61	6.602740e-07	1.751161e-06
TCGA-BR-7197-01A-11D-2201-08	201	200	1	155	4.975124e-03	0	coding only	34834024	45	155	1.291840e-06	4.449673e-06
TCGA-BR-7703-01A-11D-2053-08	864	864	0	657	0	0	coding only	34834024	207	657	5.942466e-06	1.886087e-05
TCGA-BR-7707-01A-11D-2053-08	1723	1722	1	1289	5.803831e-04	0	coding only	34834024	433	1289	1.243038e-05	3.700405e-05
TCGA-BR-7715-01A-11D-2053-08	164	164	0	128	0	0	coding only	34834024	36	128	1.033472e-06	3.674568e-06
TCGA-BR-7716-01A-21D-2053-08	176	176	0	136	0	0	coding only	34834024	40	136	1.148303e-06	3.904229e-06
TCGA-BR-7717-01A-11D-2053-08	167	167	0	117	0	0	coding only	34834024	50	117	1.435378e-06	3.358785e-06
TCGA-BR-7722-01A-31D-2201-08	61	61	0	47	0	0	coding only	34834024	14	47	4.019059e-07	1.349256e-06
TCGA-BR-7723-01A-11D-2053-08	178	178	0	131	0	0	coding only	34834024	47	131	1.349256e-06	3.760691e-06
TCGA-BR-7851-01A-11D-2201-08	1797	1796	1	1306	5.564830e-04	0	coding only	34834024	490	1306	1.406671e-05	3.749208e-05
TCGA-BR-7901-01A-11D-2201-08	235	235	0	169	0	0	coding only	34834024	66	169	1.894699e-06	4.851578e-06
TCGA-BR-7957-01A-11D-2201-08	57	57	0	46	0	0	coding only	34834024	11	46	3.157832e-07	1.320548e-06
TCGA-BR-7958-01A-21D-2340-08	182	182	0	143	0	0	coding only	34834024	39	143	1.119595e-06	4.105182e-06
TCGA-BR-7959-01A-11D-2340-08	111	111	0	90	0	0	coding only	34834024	21	90	6.028589e-07	2.583681e-06
TCGA-BR-8058-01A-31D-2340-08	57	57	0	47	0	0	coding only	34834024	10	47	2.870756e-07	1.349256e-06
TCGA-BR-8059-01A-11D-2340-08	812	812	0	635	0	0	coding only	34834024	177	635	5.081239e-06	1.822930e-05
TCGA-BR-8077-01A-11D-2340-08	135	134	1	104	7.407407e-03	0	coding only	34834024	30	104	8.612269e-07	2.985587e-06
TCGA-BR-8078-01A-11D-2340-08	1926	1925	1	1506	5.192108e-04	0	coding only	34834024	419	1506	1.202847e-05	4.323359e-05
TCGA-BR-8080-01A-11D-2340-08	168	168	0	133	0	0	coding only	34834024	35	133	1.004765e-06	3.818106e-06
TCGA-BR-8081-01A-11D-2340-08	1105	1105	0	813	0	0	coding only	34834024	292	813	8.382609e-06	2.333925e-05
TCGA-BR-8284-01A-11D-2340-08	378	378	0	273	0	0	coding only	34834024	105	273	3.014294e-06	7.837165e-06
TCGA-BR-8286-01A-12D-2340-08	164	164	0	113	0	0	coding only	34834024	51	113	1.464086e-06	3.243955e-06
TCGA-BR-8289-01A-11D-2340-08	227	226	1	181	4.405286e-03	0	coding only	34834024	45	181	1.291840e-06	5.196069e-06
TCGA-BR-8291-01A-11D-2340-08	31	31	0	26	0	0	coding only	34834024	5	26	1.435378e-07	7.463967e-07
TCGA-BR-8295-01A-11D-2340-08	60	60	0	44	0	0	coding only	34834024	16	44	4.593210e-07	1.263133e-06
TCGA-BR-8296-01A-11D-2340-08	88	88	0	61	0	0	coding only	34834024	27	61	7.751042e-07	1.751161e-06
TCGA-BR-8297-01A-12D-2340-08	302	302	0	226	0	0	coding only	34834024	76	226	2.181775e-06	6.487910e-06
TCGA-BR-8360-01A-11D-2340-08	1093	1093	0	814	0	0	coding only	34834024	279	814	8.009411e-06	2.336796e-05
TCGA-BR-8361-01A-11D-2340-08	1941	1941	0	1483	0	0	coding only	34834024	458	1483	1.314806e-05	4.257332e-05
TCGA-BR-8363-01A-11D-2340-08	1418	1418	0	1079	0	0	coding only	34834024	339	1079	9.731864e-06	3.097546e-05
TCGA-BR-8364-01A-11D-2340-08	24	24	0	19	0	0	coding only	34834024	5	19	1.435378e-07	5.454437e-07
TCGA-BR-8365-01A-21D-2340-08	26	26	0	21	0	0	coding only	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-BR-8366-01A-11D-2340-08	190	190	0	154	0	0	coding only	34834024	36	154	1.033472e-06	4.420965e-06
TCGA-BR-8367-01A-11D-2340-08	75	75	0	58	0	0	coding only	34834024	17	58	4.880286e-07	1.665039e-06
TCGA-BR-8368-01A-11D-2340-08	1228	1228	0	910	0	0	coding only	34834024	318	910	9.129006e-06	2.612388e-05
TCGA-BR-8369-01A-11D-2340-08	230	230	0	180	0	0	coding only	34834024	50	180	1.435378e-06	5.167362e-06
TCGA-BR-8370-01A-11D-2340-08	121	121	0	87	0	0	coding only	34834024	34	87	9.760572e-07	2.497558e-06
TCGA-BR-8371-01A-11D-2340-08	23	23	0	15	0	0	coding only	34834024	8	15	2.296605e-07	4.306135e-07
TCGA-BR-8372-01A-11D-2340-08	1552	1549	3	1167	1.932990e-03	0	coding only	34834024	382	1167	1.096629e-05	3.350173e-05
TCGA-BR-8373-01A-11D-2340-08	109	109	0	72	0	0	coding only	34834024	37	72	1.062180e-06	2.066945e-06
TCGA-BR-8380-01A-11D-2340-08	81	81	0	61	0	0	coding only	34834024	20	61	5.741513e-07	1.751161e-06
TCGA-BR-8381-01A-11D-2394-08	138	138	0	98	0	0	coding only	34834024	40	98	1.148303e-06	2.813341e-06
TCGA-BR-8382-01A-11D-2394-08	1025	1025	0	762	0	0	coding only	34834024	263	762	7.550090e-06	2.187516e-05
TCGA-BR-8384-01A-21D-2394-08	46	46	0	39	0	0	coding only	34834024	7	39	2.009530e-07	1.119595e-06
TCGA-BR-8483-01A-31D-2394-08	140	140	0	107	0	0	coding only	34834024	33	107	9.473496e-07	3.071709e-06
TCGA-BR-8484-01A-11D-2394-08	95	95	0	61	0	0	coding only	34834024	34	61	9.760572e-07	1.751161e-06
TCGA-BR-8485-01A-11D-2394-08	346	346	0	262	0	0	coding only	34834024	84	262	2.411435e-06	7.521382e-06
TCGA-BR-8486-01A-31D-2394-08	63	63	0	51	0	0	coding only	34834024	12	51	3.444908e-07	1.464086e-06
TCGA-BR-8487-01A-11D-2394-08	3693	3690	3	2804	8.123477e-04	0	coding only	34834024	886	2804	2.543490e-05	8.049601e-05
TCGA-BR-8588-01A-11D-2394-08	139	139	0	102	0	0	coding only	34834024	37	102	1.062180e-06	2.928172e-06
TCGA-BR-8589-01A-11D-2394-08	1230	1230	0	980	0	0	coding only	34834024	250	980	7.176891e-06	2.813341e-05
TCGA-BR-8590-01A-11D-2394-08	138	137	1	105	7.246377e-03	0	coding only	34834024	32	105	9.186421e-07	3.014294e-06
TCGA-BR-8591-01A-11D-2394-08	1767	1765	2	1337	1.131862e-03	0	coding only	34834024	428	1337	1.228684e-05	3.838201e-05
TCGA-BR-8592-01A-11D-2394-08	42	42	0	34	0	0	coding only	34834024	8	34	2.296605e-07	9.760572e-07
TCGA-BR-8676-01A-11D-2394-08	94	94	0	73	0	0	coding only	34834024	21	73	6.028589e-07	2.095652e-06
TCGA-BR-8677-01A-11D-2394-08	80	80	0	57	0	0	coding only	34834024	23	57	6.602740e-07	1.636331e-06
TCGA-BR-8678-01A-11D-2394-08	126	126	0	98	0	0	coding only	34834024	28	98	8.038118e-07	2.813341e-06
TCGA-BR-8679-01A-11D-2394-08	175	175	0	130	0	0	coding only	34834024	45	130	1.291840e-06	3.731983e-06
TCGA-BR-8680-01A-11D-2394-08	6709	6704	5	5248	7.452676e-04	0	coding only	34834024	1456	5248	4.179821e-05	1.506573e-04
TCGA-BR-8682-01A-11D-2394-08	81	81	0	58	0	0	coding only	34834024	23	58	6.602740e-07	1.665039e-06
TCGA-BR-8683-01A-11D-2394-08	167	167	0	125	0	0	coding only	34834024	42	125	1.205718e-06	3.588446e-06
TCGA-BR-8686-01A-11D-2394-08	124	124	0	84	0	0	coding only	34834024	40	84	1.148303e-06	2.411435e-06
TCGA-BR-8687-01A-11D-2394-08	201	201	0	150	0	0	coding only	34834024	51	150	1.464086e-06	4.306135e-06
TCGA-BR-8690-01A-11D-2394-08	179	179	0	132	0	0	coding only	34834024	47	132	1.349256e-06	3.789399e-06
TCGA-BR-A44T-01A-32D-A24D-08	29	29	0	16	0	0	coding only	34834024	13	16	3.731983e-07	4.593210e-07
TCGA-BR-A44U-01A-11D-A24D-08	102	102	0	72	0	0	coding only	34834024	30	72	8.612269e-07	2.066945e-06
TCGA-BR-A452-01A-91D-A25D-08	127	127	0	93	0	0	coding only	34834024	34	93	9.760572e-07	2.669804e-06
TCGA-BR-A453-01A-11D-A24D-08	76	76	0	53	0	0	coding only	34834024	23	53	6.602740e-07	1.521501e-06
TCGA-BR-A4CQ-01A-12D-A25D-08	191	190	1	140	5.235602e-03	0	coding only	34834024	50	140	1.435378e-06	4.019059e-06
TCGA-BR-A4CR-01A-11D-A24D-08	77	77	0	46	0	0	coding only	34834024	31	46	8.899345e-07	1.320548e-06
TCGA-BR-A4CS-01A-11D-A24D-08	182	182	0	132	0	0	coding only	34834024	50	132	1.435378e-06	3.789399e-06
TCGA-BR-A4IU-01A-22D-A25D-08	26	26	0	21	0	0	coding only	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-BR-A4IV-01A-31D-A25D-08	28	28	0	21	0	0	coding only	34834024	7	21	2.009530e-07	6.028589e-07
TCGA-BR-A4IY-01A-11D-A25D-08	158	158	0	123	0	0	coding only	34834024	35	123	1.004765e-06	3.531030e-06
TCGA-BR-A4IZ-01A-32D-A25D-08	10	10	0	9	0	0	coding only	34834024	1	9	2.870756e-08	2.583681e-07
TCGA-BR-A4J1-01A-11D-A25D-08	79	79	0	58	0	0	coding only	34834024	21	58	6.028589e-07	1.665039e-06
TCGA-BR-A4J2-01A-21D-A25D-08	49	49	0	31	0	0	coding only	34834024	18	31	5.167362e-07	8.899345e-07
TCGA-BR-A4J4-01A-12D-A25D-08	90	90	0	74	0	0	coding only	34834024	16	74	4.593210e-07	2.124360e-06
TCGA-BR-A4J6-01A-11D-A25D-08	40	40	0	29	0	0	coding only	34834024	11	29	3.157832e-07	8.325194e-07
TCGA-BR-A4J7-01A-31D-A25D-08	57	57	0	41	0	0	coding only	34834024	16	41	4.593210e-07	1.177010e-06
TCGA-BR-A4J8-01A-11D-A25D-08	111	111	0	70	0	0	coding only	34834024	41	70	1.177010e-06	2.009530e-06
TCGA-BR-A4PD-01A-11D-A25D-08	173	173	0	131	0	0	coding only	34834024	42	131	1.205718e-06	3.760691e-06
TCGA-BR-A4PE-01A-31D-A25D-08	238	238	0	179	0	0	coding only	34834024	59	179	1.693746e-06	5.138654e-06
TCGA-BR-A4PF-01A-11D-A25D-08	110	110	0	92	0	0	coding only	34834024	18	92	5.167362e-07	2.641096e-06
TCGA-BR-A4QI-01A-12D-A25D-08	150	150	0	110	0	0	coding only	34834024	40	110	1.148303e-06	3.157832e-06
TCGA-BR-A4QL-01A-31D-A25D-08	2199	2196	3	1672	1.364256e-03	0	coding only	34834024	524	1672	1.504276e-05	4.799905e-05
TCGA-BR-A4QM-01A-12D-A25D-08	116	116	0	78	0	0	coding only	34834024	38	78	1.090887e-06	2.239190e-06
TCGA-CD-5798-01A-11D-1600-08	100	100	0	77	0	0	coding only	34834024	23	77	6.602740e-07	2.210482e-06
TCGA-CD-5799-01A-11D-1600-08	55	55	0	38	0	0	coding only	34834024	17	38	4.880286e-07	1.090887e-06
TCGA-CD-5800-01A-11D-1600-08	177	177	0	136	0	0	coding only	34834024	41	136	1.177010e-06	3.904229e-06
TCGA-CD-5801-01A-11D-1600-08	594	594	0	460	0	0	coding only	34834024	134	460	3.846814e-06	1.320548e-05
TCGA-CD-5802-01A-11D-1600-08	62	62	0	48	0	0	coding only	34834024	14	48	4.019059e-07	1.377963e-06
TCGA-CD-5803-01A-11D-1600-08	45	45	0	34	0	0	coding only	34834024	11	34	3.157832e-07	9.760572e-07
TCGA-CD-5804-01A-12D-2053-08	103	103	0	80	0	0	coding only	34834024	23	80	6.602740e-07	2.296605e-06
TCGA-CD-5813-01A-11D-1600-08	199	198	1	152	5.025126e-03	0	coding only	34834024	46	152	1.320548e-06	4.363550e-06
TCGA-CD-8524-01A-11D-2340-08	170	170	0	132	0	0	coding only	34834024	38	132	1.090887e-06	3.789399e-06
TCGA-CD-8525-01A-11D-2340-08	92	92	0	73	0	0	coding only	34834024	19	73	5.454437e-07	2.095652e-06
TCGA-CD-8526-01A-11D-2340-08	49	49	0	43	0	0	coding only	34834024	6	43	1.722454e-07	1.234425e-06
TCGA-CD-8527-01A-11D-2340-08	303	303	0	223	0	0	coding only	34834024	80	223	2.296605e-06	6.401787e-06
TCGA-CD-8528-01A-11D-2340-08	116	116	0	87	0	0	coding only	34834024	29	87	8.325194e-07	2.497558e-06
TCGA-CD-8529-01A-11D-2340-08	454	453	1	344	2.202643e-03	0	coding only	34834024	109	344	3.129125e-06	9.875402e-06
TCGA-CD-8530-01A-11D-2340-08	101	101	0	72	0	0	coding only	34834024	29	72	8.325194e-07	2.066945e-06
TCGA-CD-8531-01A-11D-2340-08	267	267	0	204	0	0	coding only	34834024	63	204	1.808577e-06	5.856343e-06
TCGA-CD-8532-01A-11D-2340-08	56	56	0	36	0	0	coding only	34834024	20	36	5.741513e-07	1.033472e-06
TCGA-CD-8534-01A-11D-2340-08	84	84	0	66	0	0	coding only	34834024	18	66	5.167362e-07	1.894699e-06
TCGA-CD-8535-01A-11D-2340-08	301	301	0	218	0	0	coding only	34834024	83	218	2.382728e-06	6.258249e-06
TCGA-CD-8536-01A-11D-2340-08	1062	1062	0	834	0	0	coding only	34834024	228	834	6.545325e-06	2.394211e-05
TCGA-CD-A486-01A-11D-A24D-08	106	106	0	83	0	0	coding only	34834024	23	83	6.602740e-07	2.382728e-06
TCGA-CD-A487-01A-21D-A24D-08	203	203	0	156	0	0	coding only	34834024	47	156	1.349256e-06	4.478380e-06
TCGA-CD-A489-01A-11D-A24D-08	87	87	0	64	0	0	coding only	34834024	23	64	6.602740e-07	1.837284e-06
TCGA-CD-A48A-01A-12D-A24D-08	263	263	0	204	0	0	coding only	34834024	59	204	1.693746e-06	5.856343e-06
TCGA-CD-A48C-01A-11D-A24D-08	243	243	0	181	0	0	coding only	34834024	62	181	1.779869e-06	5.196069e-06
TCGA-CD-A4MG-01A-11D-A25D-08	3008	3007	1	2277	3.324468e-04	0	coding only	34834024	730	2277	2.095652e-05	6.536712e-05
TCGA-CD-A4MH-01A-11D-A25D-08	97	97	0	68	0	0	coding only	34834024	29	68	8.325194e-07	1.952114e-06
TCGA-CD-A4MI-01A-21D-A25D-08	1166	1166	0	860	0	0	coding only	34834024	306	860	8.784515e-06	2.468851e-05
TCGA-CD-A4MJ-01A-11D-A25D-08	802	802	0	623	0	0	coding only	34834024	179	623	5.138654e-06	1.788481e-05
TCGA-CG-4300-01A-01D-1158-08	159	159	0	122	0	0	coding only	34834024	37	122	1.062180e-06	3.502323e-06
TCGA-CG-4301-01A-01D-1158-08	57	57	0	42	0	0	coding only	34834024	15	42	4.306135e-07	1.205718e-06
TCGA-CG-4304-01A-01D-1158-08	84	84	0	55	0	0	coding only	34834024	29	55	8.325194e-07	1.578916e-06
TCGA-CG-4305-01A-01D-1158-08	1389	1389	0	1043	0	0	coding only	34834024	346	1043	9.932817e-06	2.994199e-05
TCGA-CG-4306-01A-01D-1158-08	1327	1326	1	1004	7.535795e-04	0	coding only	34834024	322	1004	9.243836e-06	2.882240e-05
TCGA-CG-4436-01A-01D-1158-08	207	207	0	159	0	0	coding only	34834024	48	159	1.377963e-06	4.564503e-06
TCGA-CG-4437-01A-01D-1800-08	605	604	1	467	1.652893e-03	0	coding only	34834024	137	467	3.932936e-06	1.340643e-05
TCGA-CG-4438-01A-01D-1158-08	156	156	0	124	0	0	coding only	34834024	32	124	9.186421e-07	3.559738e-06
TCGA-CG-4440-01A-01D-1158-08	138	137	1	112	7.246377e-03	0	coding only	34834024	25	112	7.176891e-07	3.215247e-06
TCGA-CG-4441-01A-01D-1800-08	137	137	0	100	0	0	coding only	34834024	37	100	1.062180e-06	2.870756e-06
TCGA-CG-4442-01A-01D-1158-08	1869	1869	0	1415	0	0	coding only	34834024	454	1415	1.303323e-05	4.062120e-05
TCGA-CG-4443-01A-01D-1158-08	114	114	0	82	0	0	coding only	34834024	32	82	9.186421e-07	2.354020e-06
TCGA-CG-4444-01A-01D-1158-08	203	203	0	144	0	0	coding only	34834024	59	144	1.693746e-06	4.133889e-06
TCGA-CG-4449-01A-01D-1158-08	115	115	0	91	0	0	coding only	34834024	24	91	6.889816e-07	2.612388e-06
TCGA-CG-4455-01A-01D-1158-08	57	57	0	37	0	0	coding only	34834024	20	37	5.741513e-07	1.062180e-06
TCGA-CG-4462-01A-01D-1158-08	85	85	0	56	0	0	coding only	34834024	29	56	8.325194e-07	1.607624e-06
TCGA-CG-4465-01A-01D-1158-08	753	752	1	575	1.328021e-03	0	coding only	34834024	177	575	5.081239e-06	1.650685e-05
TCGA-CG-4466-01A-01D-1158-08	224	224	0	172	0	0	coding only	34834024	52	172	1.492793e-06	4.937701e-06
TCGA-CG-4469-01A-01D-1158-08	345	345	0	270	0	0	coding only	34834024	75	270	2.153067e-06	7.751042e-06
TCGA-CG-4474-01A-02D-1158-08	114	114	0	86	0	0	coding only	34834024	28	86	8.038118e-07	2.468851e-06
TCGA-CG-4475-01A-01D-1158-08	61	61	0	45	0	0	coding only	34834024	16	45	4.593210e-07	1.291840e-06
TCGA-CG-4476-01A-01D-1158-08	140	140	0	114	0	0	coding only	34834024	26	114	7.463967e-07	3.272662e-06
TCGA-CG-4477-01A-01D-1158-08	146	146	0	127	0	0	coding only	34834024	19	127	5.454437e-07	3.645861e-06
TCGA-CG-5717-01A-11D-1600-08	201	201	0	150	0	0	coding only	34834024	51	150	1.464086e-06	4.306135e-06
TCGA-CG-5718-01A-11D-1600-08	100	100	0	77	0	0	coding only	34834024	23	77	6.602740e-07	2.210482e-06
TCGA-CG-5719-01A-11D-1600-08	109	109	0	80	0	0	coding only	34834024	29	80	8.325194e-07	2.296605e-06
TCGA-CG-5720-01A-11D-1600-08	110	110	0	79	0	0	coding only	34834024	31	79	8.899345e-07	2.267898e-06
TCGA-CG-5721-01A-11D-1600-08	5061	5057	4	3778	7.903576e-04	0	coding only	34834024	1279	3778	3.671698e-05	1.084572e-04
TCGA-CG-5722-01A-21D-1600-08	104	104	0	76	0	0	coding only	34834024	28	76	8.038118e-07	2.181775e-06
TCGA-CG-5723-01A-11D-1600-08	2081	2081	0	1596	0	0	coding only	34834024	485	1596	1.392317e-05	4.581727e-05
TCGA-CG-5724-01A-11D-1600-08	132	132	0	101	0	0	coding only	34834024	31	101	8.899345e-07	2.899464e-06
TCGA-CG-5726-01A-11D-1600-08	1691	1691	0	1267	0	0	coding only	34834024	424	1267	1.217201e-05	3.637248e-05
TCGA-CG-5727-01A-11D-1600-08	181	181	0	128	0	0	coding only	34834024	53	128	1.521501e-06	3.674568e-06
TCGA-CG-5728-01A-11D-1600-08	1709	1706	3	1283	1.755413e-03	0	coding only	34834024	423	1283	1.214330e-05	3.683181e-05
TCGA-CG-5730-01A-11D-1600-08	195	195	0	136	0	0	coding only	34834024	59	136	1.693746e-06	3.904229e-06
TCGA-CG-5732-01A-11D-1600-08	81	81	0	58	0	0	coding only	34834024	23	58	6.602740e-07	1.665039e-06
TCGA-CG-5733-01A-11D-1600-08	1405	1405	0	1068	0	0	coding only	34834024	337	1068	9.674449e-06	3.065968e-05
TCGA-CG-5734-01A-11D-1600-08	121	121	0	93	0	0	coding only	34834024	28	93	8.038118e-07	2.669804e-06
TCGA-D7-5577-01A-01D-1600-08	134	134	0	107	0	0	coding only	34834024	27	107	7.751042e-07	3.071709e-06
TCGA-D7-5578-01A-01D-1600-08	289	289	0	206	0	0	coding only	34834024	83	206	2.382728e-06	5.913758e-06
TCGA-D7-5579-01A-01D-1600-08	173	173	0	133	0	0	coding only	34834024	40	133	1.148303e-06	3.818106e-06
TCGA-D7-6518-01A-11D-1800-08	113	113	0	83	0	0	coding only	34834024	30	83	8.612269e-07	2.382728e-06
TCGA-D7-6519-01A-11D-1800-08	64	64	0	50	0	0	coding only	34834024	14	50	4.019059e-07	1.435378e-06
TCGA-D7-6520-01A-11D-1800-08	74	74	0	55	0	0	coding only	34834024	19	55	5.454437e-07	1.578916e-06
TCGA-D7-6521-01A-11D-1800-08	93	93	0	72	0	0	coding only	34834024	21	72	6.028589e-07	2.066945e-06
TCGA-D7-6522-01A-11D-1800-08	84	84	0	61	0	0	coding only	34834024	23	61	6.602740e-07	1.751161e-06
TCGA-D7-6524-01A-11D-1800-08	120	120	0	90	0	0	coding only	34834024	30	90	8.612269e-07	2.583681e-06
TCGA-D7-6525-01A-11D-1800-08	186	186	0	134	0	0	coding only	34834024	52	134	1.492793e-06	3.846814e-06
TCGA-D7-6526-01A-11D-1800-08	247	247	0	180	0	0	coding only	34834024	67	180	1.923407e-06	5.167362e-06
TCGA-D7-6527-01A-11D-1800-08	251	251	0	197	0	0	coding only	34834024	54	197	1.550208e-06	5.655390e-06
TCGA-D7-6528-01A-11D-1800-08	393	393	0	306	0	0	coding only	34834024	87	306	2.497558e-06	8.784515e-06
TCGA-D7-6815-01A-11D-1882-08	170	170	0	121	0	0	coding only	34834024	49	121	1.406671e-06	3.473615e-06
TCGA-D7-6817-01A-11D-1882-08	102	102	0	80	0	0	coding only	34834024	22	80	6.315664e-07	2.296605e-06
TCGA-D7-6818-01A-11D-1882-08	175	175	0	145	0	0	coding only	34834024	30	145	8.612269e-07	4.162597e-06
TCGA-D7-6820-01A-11D-1882-08	111	111	0	79	0	0	coding only	34834024	32	79	9.186421e-07	2.267898e-06
TCGA-D7-6822-01A-11D-1882-08	278	278	0	229	0	0	coding only	34834024	49	229	1.406671e-06	6.574032e-06
TCGA-D7-8570-01A-11D-2340-08	146	146	0	109	0	0	coding only	34834024	37	109	1.062180e-06	3.129125e-06
TCGA-D7-8572-01A-11D-2340-08	196	196	0	148	0	0	coding only	34834024	48	148	1.377963e-06	4.248720e-06
TCGA-D7-8573-01A-11D-2340-08	96	96	0	70	0	0	coding only	34834024	26	70	7.463967e-07	2.009530e-06
TCGA-D7-8574-01A-13D-2340-08	35	35	0	23	0	0	coding only	34834024	12	23	3.444908e-07	6.602740e-07
TCGA-D7-8575-01A-11D-2340-08	59	59	0	49	0	0	coding only	34834024	10	49	2.870756e-07	1.406671e-06
TCGA-D7-8576-01A-11D-2340-08	69	69	0	49	0	0	coding only	34834024	20	49	5.741513e-07	1.406671e-06
TCGA-D7-8578-01A-21D-2340-08	59	59	0	47	0	0	coding only	34834024	12	47	3.444908e-07	1.349256e-06
TCGA-D7-8579-01A-11D-2340-08	120	120	0	88	0	0	coding only	34834024	32	88	9.186421e-07	2.526266e-06
TCGA-D7-A4YT-01A-11D-A25D-08	332	332	0	243	0	0	coding only	34834024	89	243	2.554973e-06	6.975938e-06
TCGA-D7-A4YU-01A-21D-A25D-08	241	241	0	194	0	0	coding only	34834024	47	194	1.349256e-06	5.569268e-06
TCGA-D7-A4YV-01A-11D-A25D-08	1064	1062	2	804	1.879699e-03	0	coding only	34834024	258	804	7.406552e-06	2.308088e-05
TCGA-D7-A4YX-01A-11D-A25D-08	91	91	0	69	0	0	coding only	34834024	22	69	6.315664e-07	1.980822e-06
TCGA-D7-A4YY-01A-11D-A25D-08	574	573	1	407	1.742160e-03	0	coding only	34834024	166	407	4.765456e-06	1.168398e-05
TCGA-D7-A4Z0-01A-22D-A25D-08	334	334	0	266	0	0	coding only	34834024	68	266	1.952114e-06	7.636212e-06
TCGA-EQ-5647-01A-01D-1600-08	102	102	0	72	0	0	coding only	34834024	30	72	8.612269e-07	2.066945e-06
TCGA-EQ-8122-01A-11D-2340-08	211	211	0	160	0	0	coding only	34834024	51	160	1.464086e-06	4.593210e-06
TCGA-EQ-A4SO-01A-11D-A25D-08	199	199	0	156	0	0	coding only	34834024	43	156	1.234425e-06	4.478380e-06
TCGA-F1-6177-01A-11D-1800-08	1585	1584	1	1197	6.309148e-04	0	coding only	34834024	387	1197	1.110983e-05	3.436296e-05
TCGA-F1-6874-01A-11D-1882-08	1117	1117	0	850	0	0	coding only	34834024	267	850	7.664920e-06	2.440143e-05
TCGA-F1-6875-01A-11D-2053-08	98	98	0	75	0	0	coding only	34834024	23	75	6.602740e-07	2.153067e-06
TCGA-F1-A448-01A-11D-A24D-08	685	683	2	488	2.919708e-03	0	coding only	34834024	195	488	5.597975e-06	1.400929e-05
TCGA-FP-7735-01A-11D-2053-08	72	72	0	54	0	0	coding only	34834024	18	54	5.167362e-07	1.550208e-06
TCGA-FP-7829-01A-11D-2053-08	284	284	0	211	0	0	coding only	34834024	73	211	2.095652e-06	6.057296e-06
TCGA-FP-7916-01A-11D-2201-08	108	108	0	81	0	0	coding only	34834024	27	81	7.751042e-07	2.325313e-06
TCGA-FP-7998-01A-11D-2201-08	80	80	0	61	0	0	coding only	34834024	19	61	5.454437e-07	1.751161e-06
TCGA-FP-8099-01A-11D-2340-08	156	156	0	109	0	0	coding only	34834024	47	109	1.349256e-06	3.129125e-06
TCGA-FP-8209-01A-11D-2340-08	2	2	0	1	0	0	coding only	34834024	1	1	2.870756e-08	2.870756e-08
TCGA-FP-8210-01A-11D-2340-08	6	6	0	5	0	0	coding only	34834024	1	5	2.870756e-08	1.435378e-07
TCGA-FP-8211-01A-11D-2340-08	117	117	0	99	0	0	coding only	34834024	18	99	5.167362e-07	2.842049e-06
TCGA-FP-8631-01A-11D-2394-08	108	108	0	73	0	0	coding only	34834024	35	73	1.004765e-06	2.095652e-06
TCGA-FP-A4BE-01A-12D-A24D-08	1799	1799	0	1360	0	0	coding only	34834024	439	1360	1.260262e-05	3.904229e-05
TCGA-FP-A4BF-01A-12D-A24D-08	124	124	0	91	0	0	coding only	34834024	33	91	9.473496e-07	2.612388e-06
TCGA-HF-7132-01A-11D-2053-08	1493	1493	0	1112	0	0	coding only	34834024	381	1112	1.093758e-05	3.192281e-05
TCGA-HF-7133-01A-11D-2053-08	87	87	0	68	0	0	coding only	34834024	19	68	5.454437e-07	1.952114e-06
TCGA-HF-7136-01A-11D-2053-08	93	93	0	75	0	0	coding only	34834024	18	75	5.167362e-07	2.153067e-06
TCGA-HJ-7597-01A-21D-2201-08	946	946	0	685	0	0	coding only	34834024	261	685	7.492674e-06	1.966468e-05
TCGA-HU-8243-01A-11D-2340-08	144	144	0	107	0	0	coding only	34834024	37	107	1.062180e-06	3.071709e-06
TCGA-HU-8245-01A-11D-2340-08	78	78	0	62	0	0	coding only	34834024	16	62	4.593210e-07	1.779869e-06
TCGA-HU-8249-01A-11D-2340-08	166	166	0	122	0	0	coding only	34834024	44	122	1.263133e-06	3.502323e-06
TCGA-HU-8602-01A-11D-2394-08	1898	1897	1	1399	5.268704e-04	0	coding only	34834024	498	1399	1.429637e-05	4.016188e-05
TCGA-HU-8604-01A-11D-2394-08	235	235	0	170	0	0	coding only	34834024	65	170	1.865992e-06	4.880286e-06
TCGA-HU-8608-01A-11D-2394-08	109	109	0	87	0	0	coding only	34834024	22	87	6.315664e-07	2.497558e-06
TCGA-HU-8610-01A-22D-2394-08	74	74	0	60	0	0	coding only	34834024	14	60	4.019059e-07	1.722454e-06
TCGA-HU-A4G2-01A-11D-A25D-08	57	57	0	40	0	0	coding only	34834024	17	40	4.880286e-07	1.148303e-06
TCGA-HU-A4G3-01A-11D-A24D-08	118	118	0	89	0	0	coding only	34834024	29	89	8.325194e-07	2.554973e-06
TCGA-HU-A4G6-01A-11D-A24D-08	95	95	0	71	0	0	coding only	34834024	24	71	6.889816e-07	2.038237e-06
TCGA-HU-A4G8-01A-11D-A25D-08	1773	1772	1	1320	5.640158e-04	0	coding only	34834024	452	1320	1.297582e-05	3.789399e-05
TCGA-HU-A4G9-01A-11D-A24D-08	944	944	0	709	0	0	coding only	34834024	235	709	6.746278e-06	2.035366e-05
TCGA-HU-A4GC-01A-12D-A25D-08	167	167	0	122	0	0	coding only	34834024	45	122	1.291840e-06	3.502323e-06
TCGA-HU-A4GD-01A-11D-A25D-08	96	96	0	72	0	0	coding only	34834024	24	72	6.889816e-07	2.066945e-06
TCGA-HU-A4GF-01A-11D-A24D-08	152	152	0	119	0	0	coding only	34834024	33	119	9.473496e-07	3.416200e-06
TCGA-HU-A4GH-01A-11D-A24D-08	852	852	0	698	0	0	coding only	34834024	154	698	4.420965e-06	2.003788e-05
TCGA-HU-A4GN-01A-11D-A25D-08	1399	1399	0	1045	0	0	coding only	34834024	354	1045	1.016248e-05	2.999941e-05
TCGA-HU-A4GP-01A-11D-A25D-08	214	213	1	151	4.672897e-03	0	coding only	34834024	62	151	1.779869e-06	4.334842e-06
TCGA-HU-A4GQ-01A-11D-A25D-08	2188	2186	2	1636	9.140768e-04	0	coding only	34834024	550	1636	1.578916e-05	4.696558e-05
TCGA-HU-A4GT-01A-21D-A25D-08	2011	2010	1	1521	4.972650e-04	0	coding only	34834024	489	1521	1.403800e-05	4.366421e-05
TCGA-HU-A4GU-01A-11D-A25D-08	1761	1761	0	1292	0	0	coding only	34834024	469	1292	1.346385e-05	3.709017e-05
TCGA-HU-A4GX-01A-12D-A25D-08	1473	1472	1	1116	6.788866e-04	0	coding only	34834024	356	1116	1.021989e-05	3.203764e-05
TCGA-HU-A4GY-01A-21D-A24D-08	74	74	0	52	0	0	coding only	34834024	22	52	6.315664e-07	1.492793e-06
TCGA-HU-A4H0-01A-11D-A25D-08	195	195	0	147	0	0	coding only	34834024	48	147	1.377963e-06	4.220012e-06
TCGA-HU-A4H2-01A-11D-A25D-08	189	189	0	148	0	0	coding only	34834024	41	148	1.177010e-06	4.248720e-06
TCGA-HU-A4H3-01A-21D-A25D-08	1088	1088	0	831	0	0	coding only	34834024	257	831	7.377844e-06	2.385599e-05
TCGA-HU-A4H4-01A-21D-A25D-08	799	798	1	587	1.251564e-03	0	coding only	34834024	211	587	6.057296e-06	1.685134e-05
TCGA-HU-A4H5-01A-21D-A25D-08	301	301	0	241	0	0	coding only	34834024	60	241	1.722454e-06	6.918523e-06
TCGA-HU-A4H6-01A-11D-A25D-08	102	102	0	73	0	0	coding only	34834024	29	73	8.325194e-07	2.095652e-06
TCGA-HU-A4H8-01A-11D-A25D-08	1436	1435	1	1076	6.963788e-04	0	coding only	34834024	359	1076	1.030602e-05	3.088934e-05
TCGA-HU-A4HD-01A-11D-A25D-08	200	200	0	150	0	0	coding only	34834024	50	150	1.435378e-06	4.306135e-06
TCGA-IN-7806-01A-11D-2053-08	87	87	0	67	0	0	coding only	34834024	20	67	5.741513e-07	1.923407e-06
TCGA-IN-7808-01A-11D-2201-08	122	122	0	96	0	0	coding only	34834024	26	96	7.463967e-07	2.755926e-06
TCGA-IN-8462-01A-11D-2340-08	136	136	0	102	0	0	coding only	34834024	34	102	9.760572e-07	2.928172e-06
TCGA-IN-8663-01A-11D-2394-08	188	188	0	139	0	0	coding only	34834024	49	139	1.406671e-06	3.990352e-06
TCGA-IP-7968-01A-11D-2201-08	130	130	0	103	0	0	coding only	34834024	27	103	7.751042e-07	2.956879e-06