Sample	A_T_coord_clusters	G_C_coord_clusters	Non_coord_clusters	clusters	mutations	complex	insertions	deletions	indels	substitutions	bases	A_to_T	A_to_G	A_to_C	A	a	T_to_A	T_to_C	T_to_G	T	t	G_to_C	G_to_T	G_to_A	G	g	C_to_G	C_to_A	C_to_T	C	c	tCw_to_G	tCw_to_A	tCw_to_T	tCw	tcw	tCw_per_mut	tCw_per_C	tcw_per_c	enrich_tCw	freq_tCw	wGa_to_C	wGa_to_T	wGa_to_A	wGa	wga	wGa_per_mut	wGa_per_G	wga_per_g	enrich_wGa	freq_wGa	[tCw_to_G+tCw_to_T]_per_mut	tCw_to_G+tCw_to_T	[(C_to_G)+(C_to_T)]-[(tCw_to_G)+(tCw_to_T)]	tcw+wga	c-tcw	Fisher_p-value_tCw	odds_ratio_tCw	95%_confidence_lower_tCw	95%_confidence_upper_tCw	APOBEC_enrich	tCw_to_G_enrich	Fisher_p-value_tCw_to_G	odds_ratio_tCw_to_G	tCw_to_T_enrich	Fisher_p-value_tCw_to_T	odds_ratio_tCw_to_T	p-value_GvT_skew	non-APOBEC_mutations	non-APOBEC_substitutions
TCGA-OR-A5J1-01A-11D-A29I-10	0	0	0	0	54	2	0	5	5	47	1927	0	0	1	1	409	2	5	3	10	483	0	2	9	11	522	6	2	17	25	513	1	0	0	1	66	0.0185185185185185	0.04	0.128654970760234	0.310909090909091	0.0151515151515152	0	0	0	0	45	0	0	0.0862068965517241	0	0	0.0185185185185185	1	31	111	924	0.972793989543606	0.268730369195604	0.0132652717959587	Inf	0.291385135135135	1.55405405405405	0.495765411414607	1.66386724976006	0	1	0	1	53	46
TCGA-OR-A5J2-01A-11D-A29I-10	0	0	0	0	99	1	2	4	6	91	3731	4	13	0	17	720	2	5	5	12	810	1	11	20	32	1109	3	8	19	30	1092	1	1	0	2	106	0.0202020202020202	0.0666666666666667	0.0970695970695971	0.686792452830189	0.0188679245283019	0	3	3	6	107	0.0606060606060606	0.1875	0.0964833183047791	1.94334112149533	0.0560747663551402	0.0404040404040404	4	39	213	1988	0.609915616847254	0.957281130742716	0.309748157678588	Inf	0.961240310077519	2.58333333333333	0.335456363215678	3.1089230889875	0.794871794871795	0.741794141401957	0.777878477739855	0.569230769230769	95	87
TCGA-OR-A5J3-01A-11D-A29I-10	0	0	1	1	89	3	0	2	2	83	3403	1	10	0	11	615	1	6	3	10	653	4	11	14	29	1068	8	6	19	33	1067	2	1	1	4	93	0.0449438202247191	0.121212121212121	0.0871602624179944	1.39068100358423	0.043010752688172	1	2	0	3	67	0.0337078651685393	0.103448275862069	0.0627340823970037	1.64899639732373	0.0447761194029851	0.0449438202247191	4	41	160	1975	0.442428014380055	1.20415651368412	0.389452309213814	Inf	1.18611111111111	3.3359375	0.0568042507964331	4.11010545039883	0.404356060606061	0.923169587873587	0.38585771549124	0.559440559440559	85	79
TCGA-OR-A5J4-01A-11D-A29I-10	0	0	0	0	208	3	2	8	10	193	7913	3	15	7	25	1720	6	10	8	24	1793	26	25	26	77	2184	19	20	28	67	2216	7	4	4	15	255	0.0721153846153846	0.223880597014925	0.115072202166065	1.94556628621598	0.0588235294117647	10	5	2	17	231	0.0817307692307692	0.220779220779221	0.105769230769231	2.08736717827627	0.0735930735930736	0.110576923076923	23	76	486	3914	0.000502032874218792	2.43649457309992	1.56947790533729	Inf	2.10333790580704	3.42021033379058	3.33276072230967e-06	4.88676384074058	1.00594421582076	0.558755653857512	1.00668601646451	0.00846865797844343	185	170
TCGA-OR-A5J5-01A-11D-A29I-10	0	0	1	1	666	0	14	48	62	603	24723	1	23	2	26	5272	5	25	1	31	5017	8	13	271	292	7172	6	15	233	254	7262	0	1	1	2	694	0.003003003003003	0.0078740157480315	0.0955659597906913	0.0823935192538973	0.00288184438040346	0	2	2	4	741	0.00600600600600601	0.0136986301369863	0.103318460680424	0.132586471447322	0.00539811066126856	0.0045045045045045	3	515	1435	12999	1	0.052771080635036	0.0143197620387483	Inf	0.0582540728882192	0	1	0	0.0598722415795587	1	0.0542466475476618	0.181818181818182	663	600
TCGA-OR-A5J6-01A-31D-A29I-10	0	0	0	0	139	3	4	3	7	129	5289	2	15	2	19	1049	2	21	5	28	1104	9	7	21	37	1525	6	4	35	45	1611	1	0	1	2	157	0.0143884892086331	0.0444444444444444	0.0974549968963377	0.456050955414013	0.0127388535031847	2	0	1	3	145	0.0215827338129496	0.0810810810810811	0.0950819672131148	0.852749301025163	0.0206896551724138	0.0359712230215827	5	66	302	2834	0.824494553394926	0.710983581343707	0.269973764317581	Inf	0.731275067624289	2.07682119205298	0.17145212861255	2.34510301115538	0.370860927152318	0.975494714755246	0.347635955497732	1	134	124
TCGA-OR-A5J7-01A-11D-A29I-10	0	0	0	0	109	1	4	6	10	97	3977	1	7	2	10	863	2	7	2	11	812	14	5	16	35	1187	7	9	25	41	1115	2	3	0	5	123	0.0458715596330275	0.121951219512195	0.110313901345291	1.1054927622447	0.040650406504065	4	2	1	7	104	0.0642201834862385	0.2	0.0876158382476832	2.28269230769231	0.0673076923076923	0.0642201834862385	7	55	227	2075	0.416812295366923	1.16331031089745	0.518200101181052	Inf	1.14494813130595	2.89741976085588	0.014212922168536	3.65303623808409	0.247340711292575	0.985529800974299	0.228606684312159	0.068649885583524	102	90
TCGA-OR-A5J8-01A-11D-A29I-10	0	0	0	0	206	2	5	2	7	196	8036	3	17	4	24	1674	1	13	5	19	1620	15	36	21	72	2416	7	46	28	81	2326	0	14	1	15	219	0.0728155339805825	0.185185185185185	0.0941530524505589	1.9668526974463	0.0684931506849315	2	6	0	8	212	0.0388349514563107	0.111111111111111	0.0877483443708609	1.26624737945493	0.0377358490566038	0.0145631067961165	3	68	431	4311	0.961449217977325	0.441333033932917	0.117081506599879	Inf	0.464886768406261	1.00021092596499	0.60737066995829	1.00021561783467	0.224537146645201	0.990484448817181	0.208419044429281	1	203	193
TCGA-OR-A5JA-01A-11D-A29I-10	0	0	0	0	734	2	1	3	4	728	29848	5	10	0	15	7119	1	8	2	11	7099	10	316	21	347	7864	16	316	23	355	7766	4	118	3	125	1040	0.170299727520436	0.352112676056338	0.133917074426989	2.62933369447454	0.120192307692308	1	118	2	121	1110	0.164850136239782	0.348703170028818	0.141149542217701	2.47045200820417	0.109009009009009	0.0136239782016349	10	60	2150	13480	0.501253569528518	1.04496708047657	0.541474386223961	Inf	1.03853820598007	1.39803220035778	0.282857339112483	1.4927524792032	0.826109936575053	0.741808768724096	0.803826919667767	1	724	718
TCGA-OR-A5JB-01A-11D-A29I-10	0	0	1	1	450	3	3	9	12	429	17589	17	23	5	45	3963	16	23	4	43	4075	31	84	62	177	4719	30	79	55	164	4832	19	9	17	45	579	0.1	0.274390243902439	0.119826158940397	2.28990269177303	0.077720207253886	13	5	21	39	545	0.0866666666666667	0.220338983050847	0.115490570036025	1.90785258902192	0.0715596330275229	0.155555555555556	70	108	1124	8427	1.96152458999652e-20	4.85819510391628	3.70235692085079	Inf	3.34164700707745	4.45761624175952	1.6488338581552e-14	8.2693421491358	2.75981689326885	3.8693476516577e-09	3.60564104560965	0.434053653720744	380	359
TCGA-OR-A5JC-01A-11D-A29I-10	0	2	0	2	103	0	0	3	3	99	4059	2	13	1	16	873	2	14	1	17	816	7	4	17	28	1169	10	9	19	38	1201	4	1	3	8	110	0.0776699029126214	0.210526315789474	0.0915903413821815	2.29856459330144	0.0727272727272727	0	0	1	1	123	0.00970873786407767	0.0357142857142857	0.105218135158255	0.339430894308943	0.00813008130081301	0.0776699029126214	8	45	233	2137	0.150165137072391	1.63011561937396	0.760664321524284	Inf	1.53534699165924	2.39333501641	0.080216125285966	2.82021864195479	1.13018597997139	0.480098176720798	1.14638094308784	1	95	91
TCGA-OR-A5JD-01A-11D-A29I-10	0	0	1	1	84	0	1	3	4	79	3239	2	7	3	12	730	2	8	4	14	629	6	4	16	26	949	4	8	15	27	931	0	0	0	0	86	0	0	0.0923737916219119	0	0	1	0	0	1	94	0.0119047619047619	0.0384615384615385	0.0990516332982086	0.388297872340426	0.0106382978723404	0.0119047619047619	1	40	180	1700	0.983468086834649	0.236213954154945	0.0117869375948899	Inf	0.254742547425474	1.04444444444444	0.635494940252127	1.04936981744532	0	1	0	1	83	78
TCGA-OR-A5JF-01A-11D-A29I-10	0	1	0	1	159	2	2	2	4	152	6232	4	15	3	22	1333	3	14	7	24	1227	18	17	20	55	1865	11	11	29	51	1807	3	2	5	10	160	0.0628930817610063	0.196078431372549	0.0885445489762036	2.21446078431373	0.0625	3	3	0	6	192	0.0377358490566038	0.109090909090909	0.102949061662198	1.05965909090909	0.03125	0.0691823899371069	11	67	352	3320	0.128747686321797	1.54828461492255	0.825750808928727	Inf	1.47115384615385	2.15830721003135	0.0550656085911616	2.45962863821541	1.06447124304267	0.512933384925213	1.07180311156751	1	148	141
TCGA-OR-A5JH-01A-11D-A30A-10	0	0	1	1	68	1	2	2	4	62	2542	1	7	1	9	483	1	7	5	13	499	4	13	8	25	757	1	4	10	15	803	0	1	0	1	69	0.0147058823529412	0.0666666666666667	0.0859277708592777	0.775845410628019	0.0144927536231884	0	0	1	1	63	0.0147058823529412	0.04	0.083223249669749	0.480634920634921	0.0158730158730159	0.0147058823529412	1	22	132	1428	0.869090066256647	0.49190389127197	0.0240004506171991	Inf	0.513833992094862	0	1	0	0.656565656565657	0.796862870912551	0.636531512536671	1	67	61
TCGA-OR-A5JI-01A-11D-A29I-10	0	0	0	0	70	2	1	2	3	64	2624	1	8	2	11	547	2	8	1	11	493	5	4	9	18	794	6	4	14	24	790	0	0	1	1	81	0.0142857142857143	0.0416666666666667	0.10253164556962	0.406378600823045	0.0123456790123457	1	0	0	1	83	0.0142857142857143	0.0555555555555556	0.104534005037783	0.531459170013387	0.0120481927710843	0.0285714285714286	2	32	164	1420	0.87945987095504	0.541321504884705	0.0915863357539566	Inf	0.568149210903874	0.878048780487805	0.700364803956248	0.86591023782187	0.419936373276776	0.918729275295439	0.393729339991486	1	68	62
TCGA-OR-A5JK-01A-11D-A29I-10	0	1	0	1	109	1	0	2	2	105	4305	2	10	1	13	872	4	15	4	23	806	10	6	18	34	1327	8	6	21	35	1300	3	0	2	5	99	0.0458715596330275	0.142857142857143	0.0761538461538462	1.87590187590188	0.0505050505050505	2	1	1	4	113	0.036697247706422	0.117647058823529	0.0851544837980407	1.38157209786569	0.0353982300884956	0.073394495412844	8	49	212	2415	0.0901284611286648	1.85919336591525	0.870425234616322	Inf	1.73915921880172	3.44208595387841	0.0125309382787355	4.37715861615238	0.953193033381713	0.620546168934943	0.949308907664281	0.637186343068696	101	97
TCGA-OR-A5JL-01A-11D-A29I-10	1	0	1	2	105	0	1	7	8	95	3895	2	10	4	16	683	1	11	1	13	676	7	6	20	33	1242	7	6	20	33	1294	0	0	4	4	92	0.0380952380952381	0.121212121212121	0.071097372488408	1.70487483530962	0.0434782608695652	1	0	0	1	82	0.00952380952380952	0.0303030303030303	0.0660225442834139	0.458980044345898	0.0121951219512195	0.0476190476190476	5	49	174	2362	0.316275500213019	1.38496657251571	0.518230901879393	Inf	1.3495104299702	1.04105090311987	0.631377458352073	1.04420512265678	1.45747126436782	0.297493303884469	1.50800120840352	0.206349206349206	100	90
TCGA-OR-A5JP-01A-11D-A29I-10	0	0	2	2	178	1	4	10	14	162	6642	3	17	8	28	1402	5	14	4	23	1405	12	17	27	56	1838	16	13	26	55	1997	5	1	2	8	212	0.0449438202247191	0.145454545454545	0.106159238858287	1.37015437392796	0.0377358490566038	1	4	2	7	205	0.0393258426966292	0.125	0.111534276387378	1.12073170731707	0.0341463414634146	0.0561797752808989	10	71	417	3418	0.388628870929353	1.15439855395987	0.598808575799268	Inf	1.13538798590757	1.97070914696814	0.0780151605307032	2.2348653462933	0.694086240441609	0.841406137729011	0.669173289704079	0.699850074962519	168	152
TCGA-OR-A5JQ-01A-11D-A29I-10	0	0	0	0	89	0	1	1	2	87	3567	2	8	1	11	678	6	9	1	16	715	4	7	21	32	1137	8	3	17	28	1037	2	0	1	3	97	0.0337078651685393	0.107142857142857	0.0935390549662488	1.14543446244477	0.0309278350515464	0	0	1	1	95	0.0112359550561798	0.03125	0.0835532102022867	0.374013157894737	0.0105263157894737	0.0449438202247191	4	46	192	1982	0.65571173523705	0.897677417099473	0.292162591845659	Inf	0.905833333333333	1.88715277777778	0.288982285146138	2.06367436062357	0.59594298245614	0.86010321087225	0.573611222330565	1	85	83
TCGA-OR-A5JR-01A-11D-A29I-10	0	0	1	1	72	2	0	2	2	67	2747	3	11	2	16	508	0	1	4	5	496	5	4	17	26	918	6	1	13	20	825	1	0	1	2	65	0.0277777777777778	0.1	0.0787878787878788	1.26923076923077	0.0307692307692308	0	0	0	0	65	0	0	0.0708061002178649	0	0	0.0277777777777778	2	39	130	1613	0.820428851269833	0.636445132330131	0.108231196460021	Inf	0.654033771106942	1.21888111888112	0.575307618644162	1.24060080233882	0.446923076923077	0.901976025600883	0.427996924531154	1	70	65
TCGA-OR-A5JT-01A-11D-A29I-10	0	0	0	0	86	0	3	3	6	79	3239	1	3	1	5	612	3	8	2	13	687	3	15	18	36	949	6	7	12	25	991	2	0	1	3	89	0.0348837209302326	0.12	0.0898082744702321	1.3361797752809	0.0337078651685393	1	0	0	1	77	0.0116279069767442	0.0277777777777778	0.0811380400421496	0.342352092352092	0.012987012987013	0.0465116279069767	4	35	166	1774	0.434722024410155	1.22120791781703	0.392308029242787	Inf	1.19864071671301	3.89558232931727	0.0363946012730301	5.33495697416567	0.389558232931727	0.931307586068576	0.368634435783333	0.485714285714286	82	75
TCGA-OR-A5JV-01A-11D-A29I-10	1	0	0	1	75	0	0	1	1	74	3034	1	7	1	9	610	1	7	2	10	603	4	10	13	27	884	4	9	15	28	937	0	1	0	1	87	0.0133333333333333	0.0357142857142857	0.0928495197438634	0.384646962233169	0.0114942528735632	0	2	0	2	79	0.0266666666666667	0.0740740740740741	0.0893665158371041	0.828879512423816	0.0253164556962025	0	0	36	166	1655	1	0	0	Inf	0	0	1	0	0	1	0	1	75	74
TCGA-OR-A5JW-01A-11D-A29I-10	0	0	0	0	112	0	2	1	3	109	4469	2	12	6	20	947	2	5	3	10	841	6	13	17	36	1336	8	13	22	43	1345	0	1	1	2	111	0.0178571428571429	0.0465116279069767	0.0825278810408922	0.56358684265661	0.018018018018018	2	0	0	2	125	0.0178571428571429	0.0555555555555556	0.093562874251497	0.593777777777778	0.016	0.0267857142857143	3	50	236	2445	0.855783494778607	0.621699922984167	0.163081355049126	Inf	0.643028461784458	1.6228813559322	0.354420226120311	1.72625333157278	0.291286397218601	0.972170909978275	0.27271467086456	1	109	106
TCGA-OR-A5JX-01A-11D-A29I-10	0	1	0	1	110	1	0	3	3	105	4305	3	10	3	16	962	1	10	2	13	996	7	11	30	48	1170	5	4	19	28	1177	2	0	2	4	154	0.0363636363636364	0.142857142857143	0.130841121495327	1.09183673469388	0.025974025974026	3	1	3	7	116	0.0636363636363636	0.145833333333333	0.0991452991452991	1.47090517241379	0.0603448275862069	0.0909090909090909	10	51	270	2077	0.163677479159586	1.50804691359518	0.768461516441632	Inf	1.42501517911354	3.62191358024691	0.00822189362188669	5.48787852733955	0.886999244142101	0.678894201791167	0.87417904689343	1	100	95
TCGA-OR-A5JY-01A-31D-A29I-10	0	1	1	2	145	1	1	5	6	138	5658	5	8	4	17	1204	3	11	3	17	1157	13	14	32	59	1674	10	12	23	45	1623	3	2	1	6	139	0.0413793103448276	0.133333333333333	0.0856438693776956	1.5568345323741	0.0431654676258993	5	2	4	11	175	0.0758620689655172	0.186440677966102	0.104540023894863	1.7834382566586	0.0628571428571429	0.0896551724137931	13	65	314	2983	0.0347553401091435	1.89962606657303	1.06198172566873	Inf	1.75	3.65217391304348	0.000955786329631256	5.06226568434545	0.954545454545455	0.611589647022778	0.950011597343595	0.481265818703551	132	125
TCGA-OR-A5K2-01A-11D-A29I-10	0	1	3	4	194	5	0	5	5	183	7503	4	24	7	35	1510	4	12	6	22	1392	20	20	35	75	2306	16	8	27	51	2295	2	1	2	5	204	0.0257731958762887	0.0980392156862745	0.0888888888888889	1.10294117647059	0.0245098039215686	4	1	2	7	204	0.0360824742268041	0.0933333333333333	0.0884648742411101	1.05503267973856	0.0343137254901961	0.0515463917525773	10	88	408	4193	0.373031604823336	1.16779477971714	0.61006644900288	Inf	1.15071028411365	1.87949346405229	0.0964542069650327	2.05497451660168	0.727545857052498	0.810636843216972	0.708820560853969	0.680172297752053	184	173
TCGA-OR-A5K4-01A-11D-A29I-10	0	0	0	0	394	0	1	1	2	392	16072	4	19	3	26	3291	4	27	4	35	3336	4	10	145	159	4694	3	6	163	172	4751	0	0	3	3	419	0.00761421319796954	0.0174418604651163	0.0881919595874553	0.197771549092524	0.00715990453460621	2	2	0	4	438	0.0101522842639594	0.0251572327044025	0.0933106092884533	0.269607420809282	0.0091324200913242	0.0126903553299492	5	310	857	8588	0.999999993714489	0.161644502243154	0.0631185692905609	Inf	0.174936563501324	3.14885814302384	0.127505731982961	4.0069219978753	0.107347436693994	0.999999999859431	0.0985774511320888	1	389	387
TCGA-OR-A5K5-01A-11D-A29I-10	0	0	2	2	218	1	5	15	20	197	8077	3	20	7	30	1764	13	27	4	44	1912	16	18	34	68	2111	11	14	30	55	2290	5	2	2	9	277	0.0412844036697248	0.163636363636364	0.120960698689956	1.35280603872662	0.0324909747292419	5	4	5	14	257	0.0642201834862385	0.205882352941176	0.121743249644718	1.69111924925612	0.0544747081712062	0.0779816513761468	17	74	534	3867	0.0482004295371371	1.66337301508539	1.00537923549578	Inf	1.53963452278059	3.05243445692884	0.00086236119663774	4.25787061253915	0.901422050561798	0.672128972834379	0.889316454578295	0.542000529796259	201	180
TCGA-OR-A5K8-01A-11D-A29I-10	0	0	3	3	100	2	1	5	6	92	3772	2	9	4	15	708	0	14	5	19	715	6	12	16	34	1129	4	6	14	24	1220	2	0	0	2	80	0.02	0.0833333333333333	0.0655737704918033	1.27083333333333	0.025	1	1	0	2	80	0.02	0.0588235294117647	0.070859167404783	0.830147058823529	0.025	0.03	3	37	160	2189	0.521173778168406	1.10922471026304	0.287044333711252	Inf	1.10109375	4.404375	0.0270881853361265	5.85342848277974	0	1	0	0.142857142857143	97	89
TCGA-OR-A5K9-01A-11D-A29I-10	0	0	1	1	273	4	3	11	14	251	10291	8	22	13	43	2027	2	25	5	32	2124	20	16	42	78	3083	21	25	52	98	3057	5	6	8	19	282	0.0695970695970696	0.193877551020408	0.0922473012757605	2.10171515414677	0.0673758865248227	4	4	10	18	277	0.0659340659340659	0.230769230769231	0.089847551086604	2.56845320744238	0.0649819494584837	0.0989010989010989	27	108	559	5581	9.94542021673261e-05	2.49546179398013	1.68052854011549	Inf	2.19677996422182	2.41109996073127	0.0105750438266926	2.80723491735659	2.1032999657443	0.00211816242705658	2.36404239135317	0.0524259106482342	246	224
TCGA-OR-A5KB-01A-11D-A30A-10	0	1	5	6	2484	23	15	52	67	2337	95817	91	50	23	164	22280	108	62	27	197	22355	189	594	183	966	25197	170	639	201	1010	25985	31	63	34	128	3269	0.0515297906602254	0.126732673267327	0.125803348085434	1.00738712598699	0.0391557051085959	46	65	36	147	3237	0.0591787439613527	0.152173913043478	0.128467674723181	1.18453076520127	0.0454124189063948	0.0591787439613527	147	596	6506	44676	4.78027368185813e-08	1.69365393697748	1.44466923376032	Inf	1.55643760247813	1.68732783194771	3.07567362518124e-06	1.87490934588645	1.43406887232298	0.00130002651744614	1.53081458904551	0.563264888954565	2337	2190
TCGA-OR-A5KO-01A-11D-A29I-10	0	0	3	3	148	3	3	3	6	138	5658	0	14	3	17	1178	0	14	3	17	1165	10	13	28	51	1673	7	12	34	53	1642	0	0	8	8	194	0.0540540540540541	0.150943396226415	0.118148599269184	1.27757245672048	0.0412371134020619	1	2	1	4	166	0.027027027027027	0.0784313725490196	0.0992229527794381	0.79045594141271	0.0240963855421687	0.0675675675675676	10	69	360	2955	0.357672378304044	1.18954512819517	0.615738650142824	Inf	1.16561181434599	0.541666666666667	0.858355816481464	0.513100536223874	1.3366935483871	0.231125294837276	1.39370786858017	0.00275945618522009	138	128
TCGA-OR-A5KP-01A-11D-A30A-10	0	1	1	2	153	1	3	15	18	132	5412	2	18	2	22	1187	2	11	5	18	1001	6	10	23	39	1613	9	12	32	53	1611	1	1	2	4	133	0.0261437908496732	0.0754716981132075	0.0825574177529485	0.914172223010356	0.0300751879699248	1	0	2	3	164	0.0196078431372549	0.0769230769230769	0.101673899566026	0.75656660412758	0.0182926829268293	0.0392156862745098	6	64	297	2927	0.634550924426766	0.923942414718544	0.386140487859327	Inf	0.93044733044733	1.44736251402918	0.409510869895873	1.515945754754	0.789470462197735	0.757614621614406	0.773038904453211	0.592074592074592	147	126
TCGA-OR-A5KS-01A-11D-A30A-10	0	0	0	0	135	3	4	7	11	121	4961	2	12	3	17	1002	2	18	6	26	988	5	5	24	34	1443	9	5	30	44	1528	0	0	3	3	126	0.0222222222222222	0.0681818181818182	0.0824607329842932	0.826839826839827	0.0238095238095238	2	0	2	4	125	0.0296296296296296	0.117647058823529	0.0866250866250866	1.35811764705882	0.032	0.0518518518518519	7	61	251	2720	0.354926862774347	1.24345209895948	0.556687584441318	Inf	1.21847902507617	1.69095048377917	0.335471576675403	1.80565126368599	1.09598642467168	0.486706060974557	1.10571838148972	0.286130536130536	128	114
TCGA-OR-A5KT-01A-11D-A29I-10	0	0	0	0	86	0	3	1	4	82	3362	3	5	2	10	656	0	8	2	10	766	6	6	22	34	992	9	4	15	28	948	0	1	0	1	106	0.0116279069767442	0.0357142857142857	0.111814345991561	0.319407008086253	0.00943396226415094	0	1	4	5	91	0.0581395348837209	0.147058823529412	0.0917338709677419	1.60310277957337	0.0549450549450549	0.0465116279069767	4	48	197	1743	0.786648634607431	0.737410334815092	0.240395833263339	Inf	0.757516595080047	0	1	0	1.0646179174098	0.528463939108323	1.07243622252315	0.0606060606060606	82	78
TCGA-OR-A5KU-01A-11D-A29I-10	0	0	2	2	107	3	3	0	3	101	4141	0	13	3	16	792	2	8	2	12	803	8	11	19	38	1241	4	4	27	35	1305	0	0	0	0	106	0	0	0.0812260536398467	0	0	0	1	1	2	90	0.0186915887850467	0.0526315789473684	0.072522159548751	0.725730994152047	0.0222222222222222	0.00934579439252336	1	57	196	2350	0.99010260082369	0.210416371367181	0.0105835316892229	Inf	0.22396199859254	0	1	0	0.282386867790595	0.974508027929147	0.266520811094184	1	106	100
TCGA-OR-A5KV-01A-11D-A29I-10	0	0	0	0	106	2	1	5	6	98	4018	5	9	2	16	771	0	10	2	12	683	5	13	15	33	1331	8	9	20	37	1233	1	1	1	3	87	0.0283018867924528	0.0810810810810811	0.0705596107055961	1.14911463187325	0.0344827586206897	0	1	0	1	90	0.00943396226415094	0.0303030303030303	0.067618332081142	0.448148148148148	0.0111111111111111	0.0188679245283019	2	46	177	2387	0.85243365429888	0.586465265570908	0.100509046782413	Inf	0.603578154425612	1.11429813124728	0.606515922565571	1.12376640129105	0.413882163034705	0.91792327268491	0.396740191385873	1	104	96
TCGA-OR-A5KW-01A-11D-A29I-10	0	0	0	0	101	2	1	4	5	94	3854	0	12	2	14	794	4	9	2	15	725	9	6	11	26	1216	8	9	22	39	1119	2	0	0	2	89	0.0198019801980198	0.0512820512820513	0.0795352993744415	0.644770959377701	0.0224719101123595	0	1	2	3	130	0.0297029702970297	0.115384615384615	0.106907894736842	1.0792899408284	0.0230769230769231	0.0396039603960396	4	46	219	2116	0.702194461341218	0.840217048981268	0.27377497005573	Inf	0.85296803652968	1.25436475960247	0.484364607338788	1.28812540553817	0.646187906461879	0.828610710225238	0.623464762346052	1	97	90
TCGA-OR-A5KX-01A-11D-A29I-10	0	0	0	0	103	4	2	7	9	90	3690	0	6	3	9	786	3	5	3	11	755	5	3	23	31	1135	7	2	30	39	1014	2	0	2	4	98	0.0388349514563107	0.102564102564103	0.0966469428007889	1.06122448979592	0.0408163265306122	1	1	3	5	123	0.0485436893203883	0.161290322580645	0.108370044052863	1.48832939942303	0.040650406504065	0.0776699029126214	8	57	221	1928	0.356752523837234	1.2242970209866	0.577044769810535	Inf	1.19679777236338	2.43099547511312	0.119856698852374	2.90582625168573	0.917356783061556	0.648109828048831	0.908774767687844	0.637186343068696	95	82
TCGA-OR-A5KZ-01A-11D-A29I-10	0	0	1	1	93	0	2	8	10	83	3403	3	6	4	13	616	0	11	2	13	682	7	10	14	31	1045	9	4	13	26	1060	1	1	2	4	82	0.043010752688172	0.153846153846154	0.0773584905660377	1.98874296435272	0.0487804878048781	1	3	1	5	91	0.0537634408602151	0.161290322580645	0.0870813397129187	1.85218007798653	0.0549450549450549	0.0537634408602151	5	38	173	1932	0.281706279680459	1.46910776803206	0.543580063266523	Inf	1.41484070439575	1.52095375722543	0.385411533166312	1.59493663233731	1.3519588953115	0.387825420504228	1.39569544547978	1	88	78
TCGA-OR-A5L1-01A-11D-A30A-10	0	0	4	4	73	2	1	1	2	69	2829	1	11	1	13	499	2	7	4	13	549	2	7	10	19	892	4	5	15	24	889	1	2	0	3	84	0.0410958904109589	0.125	0.094488188976378	1.32291666666667	0.0357142857142857	0	0	0	0	74	0	0	0.0829596412556054	0	0	0.0136986301369863	1	30	158	1623	0.943414327620576	0.3425383367923	0.0169321076999257	Inf	0.363617803184973	1.87869198312236	0.428755167607184	2.05333318039874	0	1	0	1	72	68
TCGA-OR-A5L2-01A-11D-A30A-10	0	0	0	0	243	6	1	4	5	232	9512	6	19	5	30	2010	8	15	3	26	2008	23	30	35	88	2682	22	16	50	88	2812	8	2	3	13	299	0.0534979423868313	0.147727272727273	0.106330014224751	1.38932806324111	0.0434782608695652	8	4	2	14	275	0.0576131687242798	0.159090909090909	0.102535421327368	1.55157024793388	0.0509090909090909	0.0864197530864197	21	109	574	4920	0.0310425764829701	1.65119183309044	1.06113813588927	Inf	1.54615384615385	3.4031746031746	7.55129984994847e-06	4.72691705241187	0.563025210084034	0.949288513866494	0.535761846406606	0.00467046608242834	222	211
TCGA-OR-A5L3-01A-11D-A29I-10	0	0	0	0	91	4	5	2	7	79	3239	1	11	3	15	670	2	13	1	16	674	3	6	11	20	940	7	3	18	28	955	0	0	1	1	94	0.010989010989011	0.0357142857142857	0.0984293193717277	0.362841945288754	0.0106382978723404	1	0	0	1	106	0.010989010989011	0.05	0.112765957446809	0.443396226415094	0.00943396226415094	0.021978021978022	2	37	200	1695	0.926890969289858	0.458245144234463	0.0780429683113082	Inf	0.485897435897436	0.9475	0.673012081130114	0.941691790856504	0.326724137931034	0.960233069227589	0.30279802200277	1	89	77
TCGA-OR-A5L4-01A-11D-A29I-10	0	0	0	0	79	1	1	6	7	71	2911	2	9	1	12	640	0	10	0	10	556	3	10	9	22	847	3	8	16	27	868	1	1	2	4	69	0.0506329113924051	0.148148148148148	0.0794930875576037	1.86366076221149	0.0579710144927536	0	1	3	4	88	0.0506329113924051	0.181818181818182	0.103896103896104	1.75	0.0454545454545455	0.0759493670886076	6	25	157	1558	0.0621919983449297	2.37986183233804	0.941565212712025	Inf	2.1142387507705	1.82059447983015	0.439358624831768	1.98370852319848	2.18471337579618	0.0756560170695764	2.47905713319256	0.118881118881119	73	65
TCGA-OR-A5L5-01A-11D-A29I-10	0	0	1	1	119	2	2	1	3	112	4592	2	15	2	19	811	4	9	1	14	831	5	13	19	37	1478	7	8	27	42	1472	0	1	1	2	121	0.0168067226890756	0.0476190476190476	0.0822010869565217	0.579299488390397	0.0165289256198347	0	0	0	0	108	0	0	0.0730717185385656	0	0	0.00840336134453781	1	57	229	2721	0.99053043386481	0.20851713351522	0.0104961781154775	Inf	0.222105104652914	0	1	0	0.280045566736283	0.975358439251076	0.264116101272916	1	118	111
TCGA-OR-A5L6-01A-11D-A29I-10	0	0	0	0	111	1	1	2	3	107	4387	2	8	1	11	915	1	10	2	13	949	8	13	24	45	1320	9	6	23	38	1203	1	0	0	1	113	0.00900900900900901	0.0263157894736842	0.0939318370739817	0.280158360503027	0.00884955752212389	1	2	0	3	137	0.027027027027027	0.0666666666666667	0.103787878787879	0.642335766423358	0.0218978102189781	0.018018018018018	2	62	250	2273	0.989465083447683	0.293377779271091	0.0507492419780065	Inf	0.315375	1.18729411764706	0.51444674442986	1.21216663978603	0	1	0	0.428571428571429	109	105
TCGA-OR-A5L9-01A-11D-A29I-10	0	0	1	1	90	2	5	8	13	74	3034	1	12	2	15	559	1	10	2	13	553	6	6	11	23	922	5	5	13	23	1000	0	1	0	1	73	0.0111111111111111	0.0434782608695652	0.073	0.595592614651578	0.0136986301369863	1	0	1	2	74	0.0222222222222222	0.0869565217391304	0.0802603036876356	1.0834312573443	0.027027027027027	0.0222222222222222	2	33	147	1775	0.759723839995796	0.731882886485215	0.123889970877212	Inf	0.747133138969874	1.18862090290662	0.58462382083447	1.20735438370212	0.544784580498866	0.85194899454097	0.525145753962276	1	88	72
TCGA-OR-A5LA-01A-11D-A29I-10	0	0	3	3	73	0	1	3	4	69	2829	1	14	2	17	555	1	7	1	9	489	1	10	17	28	886	2	2	11	15	899	0	0	1	1	63	0.0136986301369863	0.0666666666666667	0.0700778642936596	0.951322751322751	0.0158730158730159	0	1	0	1	61	0.0136986301369863	0.0357142857142857	0.0688487584650113	0.518735362997658	0.0163934426229508	0.0136986301369863	1	30	124	1661	0.89246653115958	0.446648111556225	0.0220335969404525	Inf	0.464360041623309	0	1	0	0.514112903225806	0.866797170539813	0.496287006066332	1	72	68
TCGA-OR-A5LB-01A-11D-A29I-10	0	0	0	0	369	0	19	62	81	288	11808	4	12	4	20	2560	3	11	7	21	2461	0	15	94	109	3374	7	22	109	138	3413	3	1	0	4	334	0.010840108401084	0.0289855072463768	0.0978611192499268	0.296190228239174	0.0119760479041916	0	0	1	1	394	0.002710027100271	0.00917431192660551	0.116775340841731	0.0785637777674289	0.00253807106598985	0.010840108401084	4	206	728	6059	0.999999826417808	0.161629581669065	0.0545889107220305	Inf	0.177577184720042	3.99548665620094	0.0311575788748853	6.23902123534496	0.0459251339793212	0.999999999862476	0.0411862282375721	0.523809523809524	365	284
TCGA-OR-A5LC-01A-11D-A29I-10	0	0	0	0	145	2	2	3	5	137	5617	3	10	0	13	1136	1	9	5	15	1135	7	25	30	62	1702	7	9	31	47	1644	1	0	0	1	141	0.00689655172413793	0.0212765957446809	0.0857664233576642	0.248076052512449	0.00709219858156028	3	1	4	8	179	0.0551724137931034	0.129032258064516	0.105170387779083	1.22688772751847	0.0446927374301676	0.0551724137931034	8	67	320	3026	0.431207539901196	1.12904435798568	0.537385742208707	Inf	1.11533333333333	2.9875	0.0389755053531087	3.77984982810497	0.685655737704918	0.846090038981247	0.663664747917976	1	137	129
TCGA-OR-A5LD-01A-11D-A29I-10	0	0	1	1	110	1	3	6	9	100	4100	6	8	5	19	903	5	14	3	22	870	10	8	20	38	1147	6	5	10	21	1180	2	0	2	4	113	0.0363636363636364	0.19047619047619	0.0957627118644068	1.98904340497261	0.0353982300884956	1	0	1	2	121	0.0181818181818182	0.0526315789473684	0.105492589363557	0.498912570682906	0.0165289256198347	0.0545454545454545	6	40	234	2093	0.319007871007497	1.34147687741995	0.548927298062779	Inf	1.29710144927536	1.86458333333333	0.215241367661183	2.06327057119438	0.994444444444444	0.593922519088951	0.993829717821022	1	104	94
TCGA-OR-A5LJ-01A-11D-A29I-10	0	0	1	1	692	3	9	86	95	592	24272	3	33	5	41	5167	4	20	7	31	5199	12	27	224	263	6931	11	22	224	257	6975	3	2	3	8	724	0.0115606936416185	0.0311284046692607	0.103799283154122	0.299890362663112	0.0110497237569061	3	3	5	11	711	0.0158959537572254	0.0418250950570342	0.102582599913432	0.407721144641778	0.0154711673699015	0.0202312138728324	14	457	1435	12471	0.999999999482052	0.266247472283815	0.159423399585905	Inf	0.288043084252499	2.52798060899864	0.0261766471874035	3.0667621501952	0.173046291687407	0.999999999999762	0.158021157519192	0.737428373868863	678	578
TCGA-OR-A5LK-01A-11D-A29I-10	0	0	0	0	125	0	3	2	5	120	4920	2	9	4	15	1049	2	13	2	17	1006	8	12	20	40	1400	15	11	22	48	1465	2	0	1	3	141	0.024	0.0625	0.0962457337883959	0.649379432624113	0.0212765957446809	0	1	1	2	137	0.016	0.05	0.0978571428571429	0.510948905109489	0.0145985401459854	0.032	4	61	278	2587	0.885525843326432	0.610298791362721	0.201055552663785	Inf	0.634200332042059	0.896152643102909	0.66879354447211	0.886286737799275	0.490750256937307	0.923636657479239	0.465378412942217	1	121	116
TCGA-OR-A5LL-01A-11D-A29I-10	0	1	0	1	101	1	2	2	4	96	3936	1	4	5	10	967	2	5	4	11	806	6	13	29	48	1068	4	5	18	27	1095	1	1	2	4	114	0.0396039603960396	0.148148148148148	0.104109589041096	1.42300194931774	0.0350877192982456	2	0	4	6	129	0.0594059405940594	0.125	0.120786516853933	1.03488372093023	0.0465116279069767	0.0891089108910891	9	48	243	1920	0.191030819091435	1.48117303312571	0.724852887947103	Inf	1.40545808966862	2.67037037037037	0.0942742619003483	3.38360401211887	1.13632781717888	0.439067998466285	1.15618333361725	0.369849964277209	92	87
TCGA-OR-A5LO-01A-11D-A29I-10	0	0	1	1	163	2	3	6	9	151	6191	2	15	4	21	1343	3	9	3	15	1186	17	19	23	59	1823	16	15	25	56	1839	5	1	1	7	133	0.0429447852760736	0.125	0.0723219140837412	1.72838345864662	0.0526315789473684	9	2	4	15	167	0.0920245398773006	0.254237288135593	0.0916072408118486	2.77529686389932	0.0898203592814371	0.116564417177914	19	62	300	3362	3.156501342453e-05	3.4324872944389	2.09810891270106	Inf	2.86329218106996	5.17858585858586	1.42760507505694e-07	8.24760210815249	1.27152777777778	0.3598659621194	1.30299597737024	0.0138973359448369	144	132
TCGA-OR-A5LP-01A-11D-A29I-10	0	0	0	0	88	1	3	1	4	83	3403	2	10	2	14	616	3	9	1	13	621	4	8	16	28	1105	7	3	18	28	1061	1	0	0	1	83	0.0113636363636364	0.0357142857142857	0.0782280867106503	0.456540447504303	0.0120481927710843	0	1	2	3	82	0.0340909090909091	0.107142857142857	0.0742081447963801	1.44381533101045	0.0365853658536585	0.0340909090909091	3	42	165	2001	0.677422125949904	0.866277037927818	0.22528326151999	Inf	0.875151515151515	1.19338842975207	0.582956542180732	1.2126095746385	0.772192513368984	0.743360544995354	0.758017232884488	1	85	80
TCGA-OR-A5LR-01A-11D-A29I-10	0	0	1	1	61	1	0	0	0	59	2419	1	7	4	12	442	3	10	1	14	493	0	5	11	16	765	2	1	14	17	719	1	0	1	2	66	0.0327868852459016	0.117647058823529	0.0917941585535466	1.28163992869875	0.0303030303030303	0	1	1	2	59	0.0327868852459016	0.125	0.077124183006536	1.62076271186441	0.0338983050847458	0.0491803278688525	3	24	125	1359	0.404372263488689	1.35868218194298	0.343029962161899	Inf	1.31911111111111	5.936	0.162445450466985	10.8329895817279	0.94976	0.636143044326196	0.945423447457637	1	58	56
TCGA-P6-A5OF-01A-11D-A29I-10	0	0	0	0	77	3	1	2	3	70	2870	3	5	1	9	562	2	6	2	10	561	2	10	15	27	878	4	5	15	24	869	0	1	2	3	84	0.038961038961039	0.125	0.096662830840046	1.29315476190476	0.0357142857142857	0	0	1	1	71	0.012987012987013	0.037037037037037	0.0808656036446469	0.458007303077726	0.0140845070422535	0.038961038961039	3	33	155	1592	0.632077689329535	0.93375527771546	0.240300081568596	Inf	0.939247311827957	0	1	0	1.12709677419355	0.507318166299537	1.14112158311961	0.142857142857143	74	67
TCGA-P6-A5OH-01A-11D-A30A-10	0	0	0	0	273	3	3	17	20	248	10168	9	18	4	31	2017	10	21	7	38	2030	26	19	44	89	2992	25	18	47	90	3129	6	3	4	13	290	0.0476190476190476	0.144444444444444	0.0926813678491531	1.55850574712644	0.0448275862068966	6	4	3	13	284	0.0476190476190476	0.146067415730337	0.0949197860962567	1.53885108403228	0.0457746478873239	0.0695970695970696	19	123	574	5547	0.0761901069982183	1.49265624268019	0.94252553952902	Inf	1.42684153702704	2.50912072145932	0.00238667650937377	2.97253589709837	0.82028946663093	0.760033276366942	0.80531117754874	0.249161201009994	254	229
TCGA-PA-A5YG-01A-11D-A29I-10	0	0	1	1	48	1	0	4	4	43	1763	1	4	2	7	399	0	4	1	5	384	3	7	6	16	470	1	3	11	15	510	0	0	0	0	51	0	0	0.1	0	0	1	1	1	3	61	0.0625	0.1875	0.129787234042553	1.44467213114754	0.0491803278688525	0.0416666666666667	2	19	112	868	0.711112150996772	0.815955810088928	0.133920276304625	Inf	0.833333333333333	2.1875	0.386594313381705	2.57982690235943	0.514705882352941	0.872881730805873	0.484643958188416	1	46	41
TCGA-PK-A5H8-01A-11D-A29I-10	0	0	1	1	71	0	1	5	6	65	2665	1	6	3	10	635	0	8	2	10	606	5	13	9	27	717	5	2	11	18	707	1	0	0	1	83	0.0140845070422535	0.0555555555555556	0.117397454031117	0.473226238286479	0.0120481927710843	1	2	1	4	102	0.0563380281690141	0.148148148148148	0.142259414225941	1.04139433551198	0.0392156862745098	0.0422535211267606	3	27	185	1239	0.766597105978375	0.744280669948597	0.189888927722059	Inf	0.76972972972973	1.53945945945946	0.382154475516283	1.67359635479359	0.384864864864865	0.937807585889824	0.352662763686919	1	68	62
TCGA-PK-A5HB-01A-11D-A29I-10	0	0	2	2	1526	15	44	92	136	1371	56211	54	148	22	224	12605	67	137	19	223	12835	41	64	344	449	15473	33	61	381	475	15298	4	6	44	54	1795	0.0353866317169069	0.113684210526316	0.117335599424761	0.968880809265504	0.03008356545961	10	10	48	68	1732	0.0445609436435125	0.151447661469933	0.111936922380922	1.35297324822418	0.0392609699769053	0.0694626474442988	106	693	3527	27244	0.0661158489068368	1.18149540123461	0.984746966718641	Inf	1.15743133694549	1.65056437214078	0.0405677556419186	1.80231727547149	1.10709775818073	0.166825305806146	1.12263040445504	3.00966564615842e-25	1420	1265
Totals	2	10	48	60	13742	135	210	591	801	12700	520700	306	906	227	1439	112270	342	883	238	1463	111716	737	1742	2419	4898	147796	715	1609	2576	4900	148918	155	258	187	600	15603	0.043661766846165	0.122448979591837	0.104775782645483	1.16867635344851	0.038454143433955	168	277	197	642	15709	0.0467180905253966	0.131073907717436	0.106288397520907	1.23319111751264	0.0408682920618754	0.0514481152670645	707	5740	31312	265402	0.147421724761209	1.04401099569573	0.975888596762241	Inf	1.03917567827732	2.1079637393351	8.57654979607345e-38	2.42483071389218	0.728488938606465	0.999999999996498	0.705878686742033	0.00760833833424091	13035	11993
