gene1	gene2	pval	qval
Del_6p25.3	Del_11q23.3	0.000102	1
Del_9q34.2	Del_11q13.1	0.000102	1
Del_2q37.3	Del_20p13	0.000103	1
9p-Del	Del_2q37.3	0.000104	1
Amp_3q26.32	Amp_19q12	0.000104	1
Del_4p16.3	Del_22q13.32	0.000104	1
Del_6q27	Del_15q13.1	0.000104	1
14q-Del	16p-Del	0.000105	1
Del_4q35.1	Del_6p25.3	0.000105	1
Amp_3q26.32	Del_3p21.31	0.000106	1
18p-Del	Del_16q24.3	0.000107	1
Del_5q21.3	Del_12p13.1	0.000108	1
18q-Del	Del_6q15	0.00011	1
TP53	Del_10q26.3	0.000111	1
17p-Del	5q-Del	0.000113	1
17q-Del	22q-Del	0.000113	1
1q-Del	Del_3p21.31	0.000113	1
9q-Del	Amp_11q13.3	0.000113	1
Del_9q21.11	Del_13q14.2	0.000113	1
8p-Amp	Amp_20q13.2	0.000114	1
CBFB	Amp_1q44	0.000115	1
14q-Del	Del_11q25	0.000115	1
17p-Del	Amp_17q23.1	0.000115	1
Del_7p22.3	Del_7q36.1	0.000115	1
Del_10q26.3	Del_12p13.1	0.000115	1
20q-Amp	9p-Del	0.000116	1
Del_19q13.32	Del_20p13	0.000116	1
8q-Amp	Amp_10p15.1	0.000117	1
TP53	Del_18q23	0.000119	1
17q-Amp	Del_17p12	0.000119	1
18q-Del	Del_12q23.1	0.000119	1
8p-Del	Amp_17q23.1	0.000122	1
Del_11p15.5	Del_19q13.32	0.000122	1
1q-Del	5q-Del	0.000123	1
Del_3p21.31	Del_19q13.32	0.000123	1
Amp_10p15.1	Del_20p13	0.000124	1
Del_5q21.3	Del_9p21.3	0.000124	1
1p-Del	22q-Del	0.000125	1
APC	SMAD2	0.000127	1
Del_6q15	Del_19p13.3	0.000127	1
17p-Del	Del_12p13.1	0.000128	1
20q-Amp	Del_9p21.3	0.000129	1
8p-Del	Del_1p36.13	0.00013	1
Amp_15q26.3	Del_10q26.3	0.000132	1
15q-Del	Del_6q27	0.000133	1
Del_2q37.3	Del_22q13.32	0.000134	1
17p-Del	Del_9q21.11	0.000136	1
1q-Del	Del_1p36.13	0.000136	1
Amp_3q26.32	Del_10q26.3	0.000137	1
22q-Del	Del_18q23	0.000138	1
11p-Del	Del_17q21.31	0.00014	1
Amp_8q24.21	Del_6p25.3	0.000148	1
Amp_3p25.1	Amp_12p13.33	0.000152	1
Amp_3q26.32	Del_8p23.2	0.000152	1
8q-Amp	Amp_1p22.3	0.000153	1
1p-Del	Del_3p21.31	0.000153	1
Del_1p36.13	Del_6q27	0.000154	1
Del_5q11.2	Del_6p25.3	0.000154	1
17q-Del	Del_5q11.2	0.000157	1
Amp_11p13	Amp_11q13.3	0.000157	1
Del_2q37.3	Del_11q23.3	0.000157	1
Del_6q27	Del_19p13.3	0.000157	1
8p-Del	Del_4p16.3	0.000159	1
16p-Del	Del_5q21.3	0.00016	1
Amp_10p15.1	Del_2q37.3	0.000163	1
14q-Del	Del_22q13.32	0.000167	1
Amp_8p11.21	Amp_19q12	0.000167	1
Amp_11p13	Amp_11q14.1	0.000169	1
7q-Amp	Amp_11p13	0.00017	1
GATA3	Amp_17q23.1	0.000171	1
18p-Del	1p-Del	0.000171	1
Amp_3p25.1	Del_4q35.1	0.000172	1
4q-Del	Amp_3p25.1	0.000174	1
TP53	Amp_17q12	0.000175	1
13q-Del	Del_11q13.1	0.000177	1
15q-Del	Del_9p21.3	0.00018	1
7q-Amp	Amp_8p11.23	0.000183	1
16q-Del	6q-Del	0.000183	1
Del_8p23.2	Del_18q23	0.000183	1
Amp_3p25.1	Del_17q21.31	0.000186	1
Del_7p22.3	Del_17q21.31	0.000186	1
Del_1p36.13	Del_7q36.1	0.000187	1
20q-Amp	Amp_12q15	0.000188	1
9q-Del	Del_20p13	0.000188	1
11q-Del	Amp_17q23.1	0.000191	1
Amp_15q26.3	Del_2q37.3	0.000195	1
IL1RAP	PIK3R1	0.000196	1
4p-Del	Amp_12p13.33	0.000197	1
13q-Del	18p-Del	0.000198	1
Amp_3q26.32	Del_18q23	0.000201	1
14q-Del	Amp_12p13.33	0.000203	1
17q-Del	Del_9q21.11	0.000203	1
4q-Del	Del_1p22.1	0.000206	1
5q-Del	9q-Del	0.000206	1
Amp_12p13.33	Amp_13q34	0.000207	1
Amp_20q13.2	Del_19q13.32	0.000207	1
16p-Del	Del_9p23	0.000208	1
Amp_15q26.3	Del_4q35.1	0.000209	1
15q-Del	Del_1p22.1	0.00021	1
17p-Del	9q-Del	0.00021	1
4q-Del	Del_9p23	0.000212	1
Amp_6p23	Del_6q27	0.000213	1
9p-Del	Amp_17q23.1	0.000214	1
Amp_17q23.1	Del_1p36.13	0.000214	1
22q-Del	4p-Del	0.000215	1
8q-Amp	Amp_11q13.3	0.000216	1
16p-Del	Del_22q13.32	0.000216	1
ERBB2	SMAD2	0.000217	1
Del_1p36.13	Del_10q23.31	0.000218	1
16p-Amp	8q-Amp	0.000219	1
18p-Del	Del_9q34.2	0.000219	1
Del_1p36.13	Del_9p23	0.00022	1
Del_11p15.5	Del_22q13.32	0.000221	1
Amp_13q34	Del_5q11.2	0.000223	1
Amp_10p15.1	Del_11p15.5	0.000225	1
18q-Del	Del_2q37.3	0.000226	1
Del_6p25.3	Del_12q24.31	0.000227	1
Amp_10q22.3	Amp_19q13.42	0.00023	1
Amp_3p25.1	Del_12q23.1	0.000233	1
Amp_12p13.33	Del_11p15.5	0.000234	1
4p-Del	Del_9p21.3	0.000235	1
Amp_1p22.3	Amp_8q24.21	0.000237	1
14q-Del	Del_1p36.13	0.000239	1
Amp_8q24.21	Del_9q34.2	0.000239	1
8p-Del	Del_13q14.2	0.00024	1
7q-Amp	Amp_1q21.3	0.000244	1
Amp_3p25.1	Del_3p21.31	0.000247	1
17p-Del	Del_12q23.1	0.00025	1
9p-Del	Amp_11q13.3	0.000252	1
13q-Del	Del_7p22.3	0.000259	1
13q-Del	Del_12p13.1	0.000259	1
TBX3	1q-Amp	0.000261	1
16p-Amp	Amp_8p11.21	0.000261	1
11p-Del	4q-Del	0.000261	1
15q-Del	Del_12q23.1	0.000261	1
4p-Del	Amp_6p23	0.000261	1
Del_12q23.1	Del_20p13	0.000261	1
11p-Del	Del_5q21.3	0.000263	1
Del_11p15.5	Del_20p13	0.000265	1
8q-Amp	Amp_17q12	0.000268	1
18p-Del	Del_14q24.1	0.000269	1
Del_9q21.11	Del_18q23	0.000273	1
11q-Del	Del_19p13.3	0.000274	1
Amp_17q23.1	Del_12p13.1	0.000275	1
Del_6q15	Del_18q23	0.000276	1
13q-Del	Del_21q11.2	0.00028	1
Amp_11q13.3	Amp_12q15	0.000283	1
20p-Amp	Del_9p23	0.000284	1
Del_14q24.1	Del_16q24.3	0.000285	1
Del_12p13.1	Del_13q14.2	0.000286	1
4q-Del	Del_11p15.5	0.000288	1
16p-Del	1q-Del	0.000295	1
16q-Del	Del_6q27	0.000296	1
CASZ1	GPRIN2	0.000299	1
Del_9q21.11	Del_19p13.3	0.000299	1
15q-Del	9p-Del	0.000301	1
15q-Del	Del_10q26.3	0.000301	1
Amp_12p13.33	Amp_19q13.42	0.000302	1
TP53	Del_20p13	0.000304	1
6q-Del	9p-Del	0.000306	1
22q-Del	Del_20p13	0.000309	1
Amp_3p25.1	Amp_8q24.21	0.000312	1
Del_14q24.1	Del_18q23	0.000313	1
EYS	Amp_11q13.3	0.00032	1
8p-Del	Del_6q15	0.000321	1
Amp_20q13.2	Del_18q23	0.000328	1
1p-Del	Del_16q24.3	0.000333	1
11p-Del	Del_10q23.31	0.000335	1
Amp_11q14.1	Del_3p21.31	0.000335	1
Del_5q11.2	Del_18q23	0.00034	1
Del_11q23.3	Del_19q13.32	0.00034	1
4p-Del	Del_12p13.1	0.000344	1
5q-Del	Amp_1p22.3	0.000344	1
CTCF	Del_16q24.3	0.000345	1
Del_12p13.1	Del_19q13.32	0.000346	1
4q-Del	Amp_6q21	0.000348	1
TP53	Del_10q23.31	0.000351	1
Del_12q23.1	Del_14q24.1	0.000351	1
Del_12q24.31	Del_14q24.1	0.000351	1
17q-Del	9q-Del	0.000357	1
Amp_6p23	Amp_13q34	0.000359	1
20q-Amp	Amp_8p11.23	0.000363	1
Amp_1q21.3	Amp_19q12	0.000365	1
8p-Del	9p-Del	0.000367	1
KRAS	TBX3	0.000373	1
Del_6p25.3	Del_16q24.3	0.000375	1
ARID1A	17q-Amp	0.000377	1
13q-Del	Del_2q37.3	0.000377	1
Del_1p22.1	Del_12q23.1	0.000377	1
Amp_3p25.1	Amp_17q23.1	0.000379	1
Amp_3p25.1	Del_4p16.3	0.000383	1
18q-Del	Del_16q24.3	0.000387	1
8q-Amp	Amp_12q15	0.000388	1
15q-Del	Del_7p22.3	0.000389	1
Del_5q21.3	Del_8p23.2	0.000394	1
Amp_8q24.21	Del_12q24.31	0.000396	1
Del_7q36.1	Del_12q24.31	0.000397	1
16p-Del	9p-Del	0.000398	1
Amp_19q13.42	Del_19p13.3	0.000401	1
15q-Del	Del_2q37.3	0.000402	1
Del_8p23.2	Del_12q24.31	0.000404	1
Del_6q27	Del_20p13	0.000407	1
11p-Del	1p-Del	0.00041	1
17p-Del	Del_5q11.2	0.000418	1
ZFP36L1	1p-Del	0.000419	1
Del_5q11.2	Del_12q23.1	0.000419	1
6q-Del	Del_8p23.2	0.000421	1
18p-Del	Del_11q13.1	0.000429	1
GATA3	1q-Amp	0.000436	1
22q-Del	Del_9q34.2	0.000436	1
Amp_10p15.1	Del_9q34.2	0.00044	1
Amp_6p23	Amp_15q26.3	0.000441	1
TP53	8q-Amp	0.000443	1
RBMX	SPEN	0.000452	1
Amp_20q13.2	Del_10q26.3	0.000453	1
13q-Del	4q-Del	0.000454	1
14q-Del	Del_12q24.31	0.000454	1
Del_6q27	Del_9q21.11	0.000456	1
Del_12p13.1	Del_17q21.31	0.000456	1
13q-Del	Amp_8p11.21	0.000457	1
Amp_6q21	Del_3p21.31	0.000458	1
4p-Del	Amp_6q21	0.000463	1
Amp_8p11.23	Del_6q15	0.000463	1
Amp_8q24.21	Amp_11p13	0.000464	1
Amp_8q24.21	Del_4q35.1	0.000466	1
KDM6A	NLGN3	0.000469	1
NLGN3	ZMYM3	0.000469	1
Amp_6q21	Amp_13q34	0.000469	1
Del_13q14.2	Del_19q13.32	0.000473	1
Amp_10p15.1	Amp_13q34	0.000477	1
17q-Del	Del_16q24.3	0.000479	1
Del_6p25.3	Del_9p23	0.000481	1
11p-Del	8p-Del	0.000483	1
4q-Del	Del_8p23.2	0.000483	1
8p-Del	Del_9q34.2	0.000483	1
20q-Amp	5p-Amp	0.000487	1
4p-Del	Del_6p25.3	0.000488	1
Del_5q11.2	Del_9p21.3	0.00049	1
Amp_17q12	Del_1p36.13	0.000493	1
15q-Del	Amp_1p22.3	0.000494	1
11q-Del	15q-Del	0.000496	1
11p-Del	Del_6p25.3	0.000497	1
Del_6p25.3	Del_9q34.2	0.000497	1
Amp_3p25.1	Del_7p22.3	0.000512	1
RUFY1	SPEN	0.000513	1
Del_6q15	Del_11p15.5	0.00052	1
13q-Del	Amp_6p23	0.000522	1
1p-Del	Del_9p21.3	0.000524	1
11q-Del	Del_6p25.3	0.000539	1
13q-Del	8p-Del	0.000539	1
Amp_15q26.3	Del_10q23.31	0.000544	1
17q-Amp	8p-Del	0.000545	1
4p-Del	Del_21q11.2	0.000557	1
8p-Del	Del_18q23	0.000563	1
Amp_3p25.1	Amp_12q15	0.00057	1
Del_2q37.3	Del_18q23	0.000573	1
ACTL6B	PAX2	0.000576	1
Del_3p21.31	Del_9q21.11	0.000578	1
EYS	TP53	0.000579	1
15q-Del	Del_9p23	0.000579	1
8p-Del	Del_4q35.1	0.000582	1
CDH1	16q-Del	0.000583	1
18p-Del	Del_9q21.11	0.000585	1
15q-Del	Del_17p12	0.000586	1
11p-Del	Del_4q35.1	0.000591	1
8q-Amp	Del_13q14.2	0.000596	1
1q-Del	Del_2q37.3	0.000597	1
SMAD4	Del_18q23	0.000601	1
17q-Amp	Amp_14q21.1	0.000615	1
17q-Amp	Amp_20q13.2	0.000621	1
Amp_17q12	Del_11q25	0.000626	1
Del_5q11.2	Del_9q21.11	0.000627	1
EYS	Del_18q23	0.000631	1
17q-Del	Del_10q26.3	0.000631	1
9p-Del	Del_4p16.3	0.000631	1
Amp_15q26.3	Del_9p21.3	0.000643	1
14q-Del	Amp_3p25.1	0.000644	1
Amp_8p11.21	Del_11q13.1	0.000646	1
Amp_15q26.3	Del_9q34.2	0.000654	1
Amp_6q21	Del_4q35.1	0.000667	1
Amp_6q21	Del_15q13.1	0.000667	1
11p-Del	14q-Del	0.000676	1
7p-Amp	Amp_8p11.23	0.000681	1
Amp_6p23	Del_4q35.1	0.000681	1
MLL3	SPEN	0.000685	1
Del_7p22.3	Del_10q26.3	0.000688	1
6q-Del	Del_19p13.3	0.000694	1
Amp_3q26.32	Amp_19p13.12	0.000698	1
Del_7p22.3	Del_13q14.2	0.000698	1
20q-Amp	8p-Amp	0.000701	1
Del_6p25.3	Del_11q13.1	0.000703	1
16p-Amp	1q-Amp	0.000705	1
18q-Del	Del_20p13	0.000707	1
Amp_6p23	Amp_17q23.1	0.000709	1
Amp_13q34	Del_14q24.1	0.000709	1
APC	NF1	0.000711	1
20q-Amp	8p-Del	0.000713	1
1p-Del	Amp_11q14.1	0.000713	1
Amp_8p11.21	Del_11q23.3	0.000714	1
16p-Amp	7p-Amp	0.00072	1
Amp_12p13.33	Del_14q24.1	0.000729	1
Amp_1p22.3	Del_5q21.3	0.00073	1
TP53	Del_9q34.2	0.000738	1
Amp_20q13.2	Del_2q37.3	0.000741	1
18p-Del	Del_11p15.5	0.000743	1
20q-Amp	Amp_3q26.32	0.000747	1
Amp_12p13.33	Del_10q26.3	0.000751	1
Amp_8q24.21	Del_3p21.31	0.000767	1
Amp_15q26.3	Del_9p23	0.000772	1
20p-Amp	Amp_8p11.23	0.000775	1
Del_2q37.3	Del_21q11.2	0.000775	1
Amp_13q34	Amp_19q12	0.000776	1
16p-Del	Del_7p22.3	0.000786	1
9q-Del	Del_4p16.3	0.000787	1
Del_4p16.3	Del_20p13	0.000787	1
FBXW7	FRMPD2	0.000798	1
Del_8p23.2	Del_9q21.11	0.000798	1
9q-Del	Del_1p36.13	0.000803	1
Amp_17q12	Amp_20q13.2	0.000804	1
11q-Del	Del_7p22.3	0.000809	1
PTEN	RUFY1	0.000818	1
MUC6	Del_17q21.31	0.000827	1
TP53	Amp_10q22.3	0.000827	1
1p-Del	9p-Del	0.000828	1
Del_6p25.3	Del_22q13.32	0.000834	1
20q-Amp	7q-Amp	0.000839	1
9q-Del	Del_6p25.3	0.000844	1
Amp_3q26.32	Del_13q14.2	0.00085	1
Amp_8q24.21	Del_21q11.2	0.000852	1
Del_1p36.13	Del_9q21.11	0.000858	1
Del_4q35.1	Del_7q36.1	0.000866	1
5q-Del	Amp_6q21	0.000868	1
15q-Del	Amp_6p23	0.000887	1
6q-Del	Del_3p21.31	0.000891	1
18q-Del	4p-Del	0.000901	1
Amp_15q26.3	Del_17p12	0.000902	1
NF1	TAF1L	0.000912	1
1q-Del	Del_22q13.32	0.000932	1
11p-Del	Del_6q27	0.000939	1
14q-Del	Del_19q13.32	0.000941	1
Amp_19q12	Del_19q13.32	0.000941	1
1q-Del	Del_5q21.3	0.000943	1
Del_8p23.2	Del_10q23.31	0.000946	1
EYS	PTPN22	0.000974	1
APC	CASZ1	0.000975	1
Amp_11q13.3	Del_21q11.2	0.000978	1
17p-Del	Del_5q21.3	0.000981	1
Amp_11q14.1	Del_8p23.2	0.000983	1
Del_2q37.3	Del_5q11.2	0.000983	1
7q-Amp	Amp_19q13.42	0.000984	1
Amp_4q13.3	Amp_12q15	0.000984	1
11q-Del	Del_9q34.2	0.000988	1
Del_8p23.2	Del_12p13.1	0.001	1
TP53	Del_3p21.31	0.00101	1
5q-Del	Amp_11p13	0.00101	1
Amp_1p22.3	Amp_19q12	0.00102	1
4q-Del	Amp_12p13.33	0.00103	1
4q-Del	Del_9q21.11	0.00103	1
8p-Del	Del_19p13.3	0.00103	1
Del_15q13.1	Del_21q11.2	0.00104	1
18q-Del	Del_6q27	0.00105	1
9p-Del	Del_16q24.3	0.00105	1
Del_3p21.31	Del_7q36.1	0.00105	1
Amp_3p25.1	Del_11p15.5	0.00106	1
Del_7p22.3	Del_11p15.5	0.00106	1
16p-Del	Del_9p21.3	0.00107	1
16p-Del	22q-Del	0.00108	1
9q-Del	Amp_11q14.1	0.00109	1
18q-Del	Del_4p16.3	0.0011	1
Del_20p13	Del_22q13.32	0.0011	1
4p-Del	Amp_13q34	0.00111	1
NCOR1	RBMX	0.00114	1
RUFY1	VCPIP1	0.00114	1
Del_1p22.1	Del_11p15.5	0.00114	1
KRAS	PIK3CA	0.00116	1
20p-Amp	13q-Del	0.00116	1
15q-Del	Del_12q24.31	0.00116	1
Del_12q24.31	Del_20p13	0.00116	1
C17orf95	FGFR2	0.00117	1
Del_7q36.1	Del_20p13	0.00117	1
16p-Amp	Del_16q24.3	0.00118	1
Amp_10q22.3	Del_10q23.31	0.00119	1
Del_1p22.1	Del_7q36.1	0.0012	1
8p-Del	Del_9p23	0.00122	1
Del_11p15.5	Del_12q23.1	0.00122	1
17q-Del	Amp_17q12	0.00123	1
6q-Del	Del_21q11.2	0.00123	1
9p-Del	Del_5q21.3	0.00123	1
Amp_14q21.1	Del_22q13.32	0.00123	1
Del_9q34.2	Del_12p13.1	0.00123	1
FBXW7	ZMYM3	0.00125	1
20p-Amp	8p-Amp	0.00125	1
Amp_6q21	Amp_10q22.3	0.00125	1
Amp_3p25.1	Del_12q24.31	0.00126	1
Del_2q37.3	Del_11p15.5	0.00126	1
8p-Amp	Del_5q11.2	0.00127	1
Amp_11p13	Amp_19q12	0.00127	1
11p-Del	Amp_8q24.21	0.00128	1
8p-Del	Del_15q13.1	0.00128	1
Amp_3q26.32	Amp_20q13.2	0.0013	1
Amp_6p23	Del_6p25.3	0.00131	1
Del_1p22.1	Del_7p22.3	0.00133	1
11q-Del	4p-Del	0.00134	1
15q-Del	17q-Del	0.00134	1
15q-Del	Del_21q11.2	0.00134	1
17q-Del	Del_20p13	0.00134	1
Amp_11p13	Del_11p15.5	0.00134	1
8p-Del	Del_16q24.3	0.00135	1
Del_9q34.2	Del_12q24.31	0.00135	1
18p-Del	Del_10q23.31	0.00136	1
17q-Del	Del_11q23.3	0.00138	1
22q-Del	Del_4p16.3	0.00138	1
14q-Del	18q-Del	0.00139	1
22q-Del	4q-Del	0.00139	1
MAP2K4	PIK3CA	0.0014	1
9p-Del	Del_4q35.1	0.0014	1
Del_7q36.1	Del_11q25	0.00141	1
15q-Del	Del_11q25	0.00142	1
13q-Del	Amp_17q12	0.00143	1
Amp_15q26.3	Del_19p13.3	0.00143	1
17p-Del	Del_6p25.3	0.00144	1
Del_12p13.1	Del_18q23	0.00144	1
Amp_6p23	Amp_8p11.21	0.00145	1
Del_5q11.2	Del_7p22.3	0.00145	1
Del_5q21.3	Del_9p23	0.00147	1
Amp_19p13.12	Del_17q21.31	0.00148	1
MAP2K4	Del_17p12	0.0015	1
Amp_6q21	Amp_15q26.3	0.00151	1
APC	FBXW7	0.00152	1
APC	ZMYM3	0.00152	1
8p-Del	Amp_19p13.12	0.00152	1
Amp_1p22.3	Amp_6p23	0.00152	1
Amp_8q24.21	Del_9p23	0.00152	1
MLL3	PIK3CA	0.00153	1
15q-Del	Del_9q21.11	0.00153	1
Amp_12p13.33	Del_20p13	0.00153	1
Amp_15q26.3	Del_19q13.32	0.00155	1
Amp_19p13.12	Del_4q35.1	0.00155	1
Amp_19p13.12	Del_15q13.1	0.00155	1
14q-Del	18p-Del	0.00156	1
Amp_1q21.3	Amp_6p23	0.00156	1
Amp_20q13.2	Del_11q23.3	0.00158	1
Del_7q36.1	Del_17p12	0.00158	1
IL1RAP	SMAD2	0.00159	1
PIK3CA	SPEN	0.00159	1
Del_6q27	Del_7p22.3	0.00159	1
Del_5q21.3	Del_11q25	0.0016	1
20q-Amp	Del_6q15	0.00161	1
20p-Amp	9p-Del	0.00163	1
9p-Del	Del_11q13.1	0.00163	1
Del_11q23.3	Del_12q23.1	0.00163	1
Del_6q27	Del_18q23	0.00164	1
C17orf95	CASZ1	0.00165	1
ERBB2	RUNX1	0.00165	1
7p-Amp	Amp_8p11.21	0.00167	1
Amp_12q15	Del_12q24.31	0.00167	1
7p-Amp	Amp_14q21.1	0.00168	1
11p-Del	Del_15q13.1	0.00168	1
Del_5q21.3	Del_6p25.3	0.00168	1
8p-Del	Amp_12q15	0.00169	1
Del_1p22.1	Del_9q21.11	0.00169	1
Del_6p25.3	Del_10q26.3	0.00169	1
16p-Del	Del_10q26.3	0.00171	1
20q-Amp	Amp_17q12	0.00172	1
Amp_1q44	Del_16q24.3	0.00172	1
AQP12A	GPRIN2	0.00174	1
14q-Del	Del_11p15.5	0.00176	1
18q-Del	Del_12q24.31	0.00178	1
MAP3K1	PIK3CA	0.00179	1
Amp_8p11.23	Del_13q14.2	0.00179	1
1p-Del	Del_2q37.3	0.0018	1
Amp_17q23.1	Del_6q27	0.0018	1
Del_6p25.3	Del_11q25	0.0018	1
AQP12A	20q-Amp	0.00182	1
Del_3p21.31	Del_6q15	0.00182	1
TAF1L	ZMYM3	0.00183	1
17q-Amp	8q-Amp	0.00183	1
16q-Del	1p-Del	0.00183	1
Amp_8q24.21	Del_15q13.1	0.00184	1
ARID1A	PTPN22	0.00185	1
16p-Del	Del_10q23.31	0.00186	1
5p-Amp	Amp_8q24.21	0.00188	1
Amp_8p11.23	Del_16q24.3	0.00188	1
Amp_8q24.21	Amp_19q13.42	0.00188	1
Amp_12p13.33	Del_4p16.3	0.00188	1
Amp_17q23.1	Del_20p13	0.00188	1
13q-Del	1p-Del	0.00189	1
13q-Del	Del_5q21.3	0.0019	1
CDH1	Amp_1q44	0.00191	1
CDH1	Del_16q24.3	0.00192	1
4q-Del	Del_22q13.32	0.00192	1
Amp_17q23.1	Del_6q15	0.00192	1
11q-Del	Amp_8q24.21	0.00193	1
Amp_15q26.3	Del_5q21.3	0.00193	1
Amp_3p25.1	Del_2q37.3	0.00194	1
16p-Del	Del_11p15.5	0.00195	1
22q-Del	Del_11q13.1	0.00196	1
8p-Del	Del_12q24.31	0.00197	1
Amp_8p11.23	Amp_17q23.1	0.00197	1
PTPN22	SMAD4	0.00198	1
11p-Del	Amp_1q44	0.002	1
Amp_11q14.1	Del_9p23	0.002	1
Amp_10q22.3	Del_19q13.32	0.00201	1
4q-Del	Del_6p25.3	0.00203	1
4p-Del	Del_9q21.11	0.00204	1
8p-Del	Del_17q21.31	0.00205	1
Del_5q11.2	Del_11q25	0.00205	1
Del_6p25.3	Del_18q23	0.00205	1
Amp_8p11.23	Amp_19q13.42	0.00206	1
Amp_11q14.1	Del_6p25.3	0.00206	1
Del_4q35.1	Del_12p13.1	0.00206	1
Del_5q21.3	Del_6q27	0.00206	1
ERBB2	PIK3R1	0.00207	1
16p-Amp	Amp_8p11.23	0.00208	1
Amp_12q15	Del_8p23.2	0.00209	1
16p-Amp	8p-Amp	0.0021	1
22q-Del	Del_11p15.5	0.0021	1
Del_1p22.1	Del_9q34.2	0.0021	1
16p-Del	Amp_8q24.21	0.00211	1
Del_8p23.2	Del_17q21.31	0.00211	1
Amp_8p11.21	Del_6q15	0.00215	1
11q-Del	Amp_8p11.23	0.00218	1
22q-Del	Del_21q11.2	0.00219	1
Del_5q21.3	Del_22q13.32	0.00221	1
17q-Amp	Amp_8p11.21	0.00224	1
4q-Del	Amp_6p23	0.00224	1
Amp_11q13.3	Amp_14q21.1	0.00224	1
Del_5q21.3	Del_18q23	0.00228	1
11q-Del	18q-Del	0.00229	1
Amp_19p13.12	Del_14q24.1	0.00231	1
18q-Del	Del_4q35.1	0.00232	1
MAP3K1	Del_16q24.3	0.00233	1
8p-Del	Del_10q23.31	0.00233	1
4p-Del	Amp_3p25.1	0.00234	1
11p-Del	Del_5q11.2	0.00235	1
Del_4p16.3	Del_9q34.2	0.00235	1
1p-Del	Amp_1q21.3	0.00236	1
Del_6q27	Del_9q34.2	0.00236	1
Del_7q36.1	Del_11q23.3	0.00237	1
20q-Amp	Amp_14q21.1	0.00238	1
5q-Del	Del_12p13.1	0.0024	1
Amp_6q21	Amp_10p15.1	0.0024	1
Amp_10p15.1	Amp_19q13.42	0.0024	1
IRS4	TFE3	0.00242	1
16q-Del	17q-Del	0.00242	1
16p-Del	Del_8p23.2	0.00243	1
Del_5q21.3	Del_9q21.11	0.00245	1
11p-Del	Del_16q24.3	0.00247	1
Del_9q34.2	Del_16q24.3	0.00247	1
22q-Del	Del_19q13.32	0.00248	1
18p-Del	9q-Del	0.0025	1
18p-Del	Del_20p13	0.0025	1
Del_9q34.2	Del_19q13.32	0.00251	1
APC	C17orf95	0.00252	1
Del_7q36.1	Del_15q13.1	0.00252	1
Amp_11q14.1	Del_4q35.1	0.00255	1
16q-Del	18q-Del	0.00256	1
Del_6q15	Del_17q21.31	0.00256	1
GATA3	Amp_1q21.3	0.00257	1
Amp_11q14.1	Del_9q21.11	0.00257	1
Amp_12p13.33	Del_9q34.2	0.00258	1
Amp_13q34	Del_3p21.31	0.00258	1
USP36	Del_3p21.31	0.0026	1
Amp_8q24.21	Del_7p22.3	0.0026	1
Amp_8q24.21	Del_18q23	0.00261	1
ARID1A	NCOR1	0.00262	1
11q-Del	Amp_20q13.2	0.00264	1
Del_6q27	Del_21q11.2	0.00264	1
22q-Del	Amp_8p11.23	0.00265	1
ZFP36L1	Del_13q14.2	0.00266	1
Amp_6q21	Del_17q21.31	0.00266	1
APC	NCOR1	0.00267	1
RB1	Amp_13q34	0.00269	1
4q-Del	Del_18q23	0.00269	1
Amp_19p13.12	Del_19q13.32	0.0027	1
TP53	Amp_20q13.2	0.00272	1
20q-Amp	Del_11q23.3	0.00272	1
GATA3	22q-Del	0.00273	1
8q-Amp	13q-Del	0.00276	1
13q-Del	Amp_11q13.3	0.00276	1
Del_10q26.3	Del_22q13.32	0.00276	1
17p-Del	1p-Del	0.00277	1
18q-Del	Amp_20q13.2	0.00279	1
Amp_8p11.23	Del_19p13.3	0.0028	1
Amp_8q24.21	Del_12q23.1	0.00282	1
PTPN22	SPEN	0.00283	1
Del_6p25.3	Del_15q13.1	0.00283	1
EYS	Del_10q26.3	0.00284	1
13q-Del	Amp_8p11.23	0.00284	1
C17orf95	TAF1L	0.00285	1
15q-Del	Del_6p25.3	0.00286	1
Del_4p16.3	Del_6q27	0.00286	1
Del_21q11.2	Del_22q13.32	0.00288	1
20p-Amp	5p-Amp	0.00289	1
14q-Del	Del_8p23.2	0.0029	1
RB1	TP53	0.00294	1
Del_4q35.1	Del_21q11.2	0.00296	1
Amp_8p11.21	Del_11q25	0.00299	1
7q-Amp	Amp_20q13.2	0.003	1
18q-Del	Del_11q13.1	0.003	1
4q-Del	Del_21q11.2	0.003	1
Amp_12p13.33	Amp_15q26.3	0.003	1
20p-Amp	Amp_3q26.32	0.00301	1
Del_4p16.3	Del_12p13.1	0.00301	1
16p-Del	Amp_12p13.33	0.00303	1
16p-Del	Del_9q21.11	0.00303	1
Del_7p22.3	Del_9q21.11	0.00304	1
Amp_8p11.21	Amp_10q22.3	0.00306	1
9p-Del	Del_20p13	0.00308	1
20p-Amp	Del_9p21.3	0.00309	1
11q-Del	14q-Del	0.00309	1
1p-Del	Del_15q13.1	0.00309	1
Amp_6q21	Del_9q34.2	0.00309	1
Amp_10p15.1	Del_12q24.31	0.0031	1
Amp_20q13.2	Del_7p22.3	0.00313	1
18q-Del	Del_10q23.31	0.00314	1
8q-Amp	Amp_13q34	0.00316	1
EYS	SPEN	0.00317	1
22q-Del	Del_2q37.3	0.00319	1
20q-Amp	Del_18q23	0.0032	1
16p-Del	Del_4p16.3	0.0032	1
8q-Amp	Del_19p13.3	0.00321	1
Amp_19q13.42	Del_19q13.32	0.00323	1
FOXA1	Del_11q13.1	0.00327	1
22q-Del	Del_10q26.3	0.00327	1
TP53	Del_6p25.3	0.00328	1
7q-Amp	Amp_8p11.21	0.00331	1
Amp_19p13.12	Del_5q11.2	0.00331	1
Amp_8p11.21	Amp_14q21.1	0.00333	1
PTPN22	VCPIP1	0.00336	1
22q-Del	Amp_14q21.1	0.00336	1
Del_2q37.3	Del_10q23.31	0.00337	1
Del_9q34.2	Del_18q23	0.00337	1
CASZ1	SMAD2	0.0034	1
FRMPD2	SMAD2	0.0034	1
Amp_3p25.1	Amp_6p23	0.00342	1
Del_11p15.5	Del_12p13.1	0.00342	1
GATA3	Del_9p21.3	0.00347	1
Amp_8p11.23	Del_9p23	0.00348	1
TP53	20p-Amp	0.0035	1
11q-Del	Del_12q23.1	0.00352	1
Amp_17q23.1	Del_11p15.5	0.00352	1
C17orf95	Amp_17q12	0.00353	1
13q-Del	Del_4q35.1	0.00354	1
9p-Del	Del_12p13.1	0.00355	1
5p-Amp	Amp_12q15	0.00356	1
Amp_3p25.1	Del_14q24.1	0.00357	1
Del_15q13.1	Del_19q13.32	0.00364	1
1q-Del	Del_21q11.2	0.00365	1
11p-Del	Del_6q15	0.00367	1
Del_6q15	Del_9q34.2	0.00367	1
ERBB2	TAF1L	0.00372	1
ICOSLG	MYH9	0.00374	1
Amp_15q26.3	Del_11q23.3	0.00374	1
Amp_1q44	Del_1p22.1	0.00376	1
Amp_20q13.2	Del_11p15.5	0.00376	1
17q-Del	Del_19q13.32	0.00379	1
16p-Del	Del_11q13.1	0.0038	1
Del_12q24.31	Del_16q24.3	0.00383	1
Del_4p16.3	Del_7q36.1	0.00385	1
Amp_1q44	Amp_3q26.32	0.00391	1
Del_7q36.1	Del_16q24.3	0.00392	1
Del_10q23.31	Del_12p13.1	0.00395	1
Amp_17q12	Del_9p23	0.004	1
Amp_13q34	Del_10q26.3	0.00401	1
Amp_12p13.33	Del_3p21.31	0.00403	1
15q-Del	Del_9q34.2	0.00404	1
EYS	Amp_20q13.2	0.00405	1
IL1RAP	NCOR1	0.00405	1
Del_4p16.3	Del_6p25.3	0.00405	1
20q-Amp	18q-Del	0.00406	1
18p-Del	Amp_11q13.3	0.00406	1
18q-Del	Amp_11q14.1	0.00406	1
Del_7q36.1	Del_11p15.5	0.00406	1
18q-Del	Del_14q24.1	0.00407	1
8p-Del	Del_10q26.3	0.00408	1
Del_5q21.3	Del_7p22.3	0.00408	1
GPRIN2	IL1RAP	0.00409	1
MAP3K1	16q-Del	0.00413	1
Amp_11q13.3	Del_16q24.3	0.00413	1
ACTL6B	Del_8p23.2	0.00415	1
20p-Amp	7q-Amp	0.00415	1
Amp_17q12	Del_1p22.1	0.00417	1
APC	EYS	0.00418	1
Del_11q23.3	Del_12p13.1	0.00418	1
Amp_12q15	Del_18q23	0.00419	1
7p-Amp	Amp_8q24.21	0.00421	1
9p-Del	Del_5q11.2	0.00423	1
5q-Del	Del_18q23	0.00424	1
7q-Amp	Amp_1q44	0.00425	1
9q-Del	Del_4q35.1	0.00425	1
Amp_6p23	Del_8p23.2	0.00428	1
Del_2q37.3	Del_12p13.1	0.0043	1
4p-Del	Del_7q36.1	0.00435	1
Del_2q37.3	Del_6q15	0.00437	1
Del_11q13.1	Del_20p13	0.00437	1
Amp_13q34	Del_12q24.31	0.00438	1
Del_1p22.1	Del_12q24.31	0.00438	1
17p-Del	Amp_11q13.3	0.0044	1
Amp_19p13.12	Del_12q23.1	0.00441	1
Amp_19q12	Del_4p16.3	0.00447	1
1q-Del	Del_9p23	0.00448	1
18p-Del	Amp_17q12	0.00449	1
CASZ1	TPP2	0.0045	1
13q-Del	Del_19q13.32	0.0045	1
1q-Del	Del_12p13.1	0.0045	1
15q-Del	Del_6q15	0.00452	1
1q-Del	22q-Del	0.00452	1
Del_16q24.3	Del_17q21.31	0.00452	1
FBXW7	SMAD2	0.00455	1
KDM6A	SMAD4	0.00455	1
KDM6A	TFE3	0.00455	1
11p-Del	6q-Del	0.00455	1
Amp_11p13	Del_11q23.3	0.00458	1
TP53	Del_2q37.3	0.00459	1
HRNR	16p-Del	0.00461	1
11q-Del	Del_17q21.31	0.00461	1
11p-Del	Amp_19p13.12	0.00464	1
1p-Del	Del_14q24.1	0.00464	1
Amp_8p11.21	Amp_11q14.1	0.00466	1
CASZ1	NF1	0.00467	1
16p-Amp	20q-Amp	0.00467	1
18p-Del	Del_6q15	0.00467	1
7p-Amp	Amp_3q26.32	0.00469	1
Del_12q23.1	Del_13q14.2	0.00469	1
Del_12q24.31	Del_13q14.2	0.00469	1
CDH1	MYH9	0.0047	1
18q-Del	Del_9q21.11	0.0047	1
Amp_19q12	Del_11p15.5	0.00475	1
4q-Del	Del_9p21.3	0.00479	1
Amp_10p15.1	Del_19p13.3	0.00479	1
Amp_17q23.1	Del_19p13.3	0.0048	1
Del_1p22.1	Del_8p23.2	0.0048	1
Del_7q36.1	Del_10q26.3	0.0048	1
1p-Del	Del_11q13.1	0.00481	1
Del_10q23.31	Del_11q13.1	0.00481	1
11p-Del	Del_12q23.1	0.00483	1
11p-Del	Del_12q24.31	0.00483	1
Del_9q34.2	Del_12q23.1	0.00483	1
Del_7p22.3	Del_16q24.3	0.00484	1
Amp_15q26.3	Del_3p21.31	0.00486	1
16q-Del	Del_3p21.31	0.0049	1
17q-Del	8p-Del	0.00496	1
8p-Del	Del_21q11.2	0.00496	1
SPEN	TGS1	0.00497	1
Amp_6p23	Amp_19q12	0.00499	1
EYS	TAF1L	0.005	1
Del_1p36.13	Del_12q23.1	0.005	1
13q-Del	Amp_19q12	0.00503	1
Amp_3q26.32	Del_20p13	0.00503	1
9q-Del	Amp_12p13.33	0.00506	1
TP53	Amp_19q13.42	0.00509	1
Amp_10p15.1	Amp_10q22.3	0.0051	1
Amp_11q14.1	Amp_12q15	0.00512	1
16p-Del	18q-Del	0.00516	1
APC	TFE3	0.00518	1
6q-Del	Del_2q37.3	0.00518	1
15q-Del	1p-Del	0.00519	1
1p-Del	9q-Del	0.00519	1
Del_6p25.3	Del_10q23.31	0.0052	1
17q-Del	5q-Del	0.00522	1
ARID1A	MUC6	0.00523	1
C17orf95	FOXA1	0.00523	1
11q-Del	Del_18q23	0.00524	1
Del_7q36.1	Del_10q23.31	0.0053	1
11p-Del	16q-Del	0.00532	1
16p-Amp	5p-Amp	0.00534	1
ARID1A	Amp_6p23	0.00536	1
Amp_8q24.21	Del_17p12	0.00536	1
18q-Del	4q-Del	0.00539	1
11q-Del	5q-Del	0.00542	1
1p-Del	Del_19p13.3	0.00542	1
FOXA1	MYH9	0.00545	1
8q-Amp	Amp_19q13.42	0.00546	1
Del_6p25.3	Del_9q21.11	0.00547	1
Amp_13q34	Del_22q13.32	0.0055	1
Amp_20q13.2	Del_1p36.13	0.00551	1
16p-Del	18p-Del	0.00556	1
Amp_20q13.2	Del_20p13	0.00556	1
Amp_17q12	Del_11q23.3	0.0056	1
1p-Del	Del_9q34.2	0.00561	1
FOXA1	1q-Amp	0.00563	1
1p-Del	Del_4p16.3	0.00566	1
Amp_15q26.3	Amp_19q13.42	0.00566	1
PIK3CA	1q-Amp	0.00569	1
16q-Del	Del_8p23.2	0.00569	1
1p-Del	Amp_11q13.3	0.0057	1
Amp_19q12	Amp_20q13.2	0.0057	1
CASZ1	IL1RAP	0.00575	1
GATA3	Del_9q21.11	0.00575	1
20p-Amp	7p-Amp	0.00575	1
Amp_11q14.1	Del_13q14.2	0.00575	1
Amp_1p22.3	Del_15q13.1	0.00579	1
Amp_4q13.3	Amp_20q13.2	0.00579	1
CDH1	TBX3	0.0058	1
20q-Amp	Del_19p13.3	0.0058	1
5q-Del	Del_9q21.11	0.00581	1
5q-Del	Del_9p21.3	0.00583	1
MYH9	1q-Amp	0.00585	1
20p-Amp	Del_13q14.2	0.00586	1
6q-Del	9q-Del	0.00589	1
PIK3CA	SMAD2	0.0059	1
SPEN	Amp_11p13	0.0059	1
8q-Amp	11q-Del	0.00592	1
Amp_11q14.1	Del_10q26.3	0.00592	1
Del_7p22.3	Del_9p23	0.00592	1
Amp_11q14.1	Del_1p22.1	0.00593	1
Del_19q13.32	Del_22q13.32	0.00603	1
9q-Del	Del_1p22.1	0.00605	1
Del_6q27	Del_17q21.31	0.00609	1
MAP2K4	ZNF362	0.00616	1
ZFP36L1	Del_1p22.1	0.00617	1
Amp_14q21.1	Del_2q37.3	0.00617	1
Del_7q36.1	Del_12q23.1	0.00617	1
16p-Del	8p-Del	0.00619	1
Amp_8q24.21	Del_6q27	0.0062	1
PIK3CA	TAF1L	0.00622	1
FRMPD2	SPEN	0.00633	1
8p-Amp	5q-Del	0.00634	1
Amp_8p11.21	Del_20p13	0.00635	1
TP53	Amp_1p22.3	0.00637	1
18p-Del	Del_15q13.1	0.00637	1
Amp_11p13	Amp_15q26.3	0.00641	1
ARID1A	KDM6A	0.00642	1
Del_7p22.3	Del_9q34.2	0.00645	1
1p-Del	Del_7p22.3	0.00647	1
Amp_3p25.1	Amp_14q21.1	0.00647	1
16p-Amp	20p-Amp	0.00648	1
16p-Amp	Amp_8q24.21	0.00648	1
MLL3	20p-Amp	0.00659	1
20p-Amp	Amp_12q15	0.00659	1
6q-Del	Amp_8p11.23	0.00662	1
Del_4q35.1	Del_9p23	0.00662	1
RB1	15q-Del	0.00667	1
Amp_11q13.3	Del_9q21.11	0.00669	1
Del_9p21.3	Del_12p13.1	0.0067	1
11p-Del	17q-Del	0.00674	1
11p-Del	Amp_19q12	0.00674	1
Del_10q23.31	Del_22q13.32	0.00674	1
17q-Amp	20p-Amp	0.00677	1
15q-Del	Amp_13q34	0.00678	1
1q-Del	Del_11q23.3	0.00679	1
RBMX	Amp_10p15.1	0.00684	1
Amp_12q15	Del_9p21.3	0.00687	1
Del_5q11.2	Del_9p23	0.00687	1
Amp_8q24.21	Del_4p16.3	0.00695	1
Amp_11q14.1	Del_18q23	0.00701	1
MED23	6q-Del	0.00713	1
8p-Amp	15q-Del	0.00713	1
1q-Amp	5p-Amp	0.00718	1
C17orf95	NF1	0.00719	1
ICOSLG	16q-Del	0.00726	1
14q-Del	Del_21q11.2	0.00726	1
ERBB2	TFE3	0.00731	1
Amp_8q24.21	Del_9p21.3	0.00733	1
CDH1	RUNX1	0.0074	1
8q-Amp	Del_5q11.2	0.00742	1
Amp_10p15.1	Amp_19p13.12	0.00742	1
9p-Del	Del_12q23.1	0.00744	1
9p-Del	Del_12q24.31	0.00744	1
Del_10q26.3	Del_12q23.1	0.00744	1
8p-Del	Del_7p22.3	0.00747	1
Amp_12q15	Del_9p23	0.00748	1
16p-Del	Amp_8p11.21	0.00752	1
Amp_11q14.1	Amp_17q12	0.00754	1
15q-Del	17p-Del	0.0076	1
Amp_17q23.1	Del_11q13.1	0.00761	1
Amp_10q22.3	Amp_20q13.2	0.00763	1
17q-Amp	1q-Amp	0.00765	1
FBXW7	IL1RAP	0.00766	1
MAP2K4	17p-Del	0.00767	1
16p-Del	Del_6q15	0.00772	1
Amp_3p25.1	Del_18q23	0.00774	1
5p-Amp	Amp_20q13.2	0.00775	1
18p-Del	Del_10q26.3	0.00775	1
ARID1A	MYH9	0.00776	1
Amp_1q21.3	Amp_3q26.32	0.00776	1
14q-Del	1p-Del	0.0078	1
Del_6q15	Del_7q36.1	0.0078	1
4p-Del	Del_7p22.3	0.00781	1
MED23	18p-Del	0.00783	1
1p-Del	Del_9p23	0.00784	1
1p-Del	5q-Del	0.00785	1
4q-Del	Amp_11q14.1	0.00787	1
Amp_11p13	Del_11q25	0.00792	1
22q-Del	Del_10q23.31	0.00793	1
20q-Amp	11q-Del	0.00796	1
9p-Del	Amp_8q24.21	0.00797	1
PIK3CA	16q-Del	0.00803	1
16p-Del	9q-Del	0.00803	1
11p-Del	Del_18q23	0.00807	1
Del_6q15	Del_12p13.1	0.00807	1
MAP3K1	MLL3	0.00809	1
4q-Del	Del_7q36.1	0.00809	1
Del_7p22.3	Del_9p21.3	0.00809	1
ERBB2	MLL3	0.0081	1
RB1	Del_7q36.1	0.0081	1
Amp_19q12	Del_9q21.11	0.00812	1
Amp_11q14.1	Del_9q34.2	0.00818	1
5q-Del	Amp_6p23	0.0082	1
Del_11q25	Del_12q24.31	0.00821	1
Del_6p25.3	Del_8p23.2	0.00822	1
Del_1p22.1	Del_4q35.1	0.00824	1
Del_1p22.1	Del_15q13.1	0.00824	1
Amp_12q15	Amp_17q23.1	0.00829	1
Amp_3p25.1	Amp_20q13.2	0.0083	1
6q-Del	8p-Del	0.00841	1
16p-Del	Del_12q23.1	0.0085	1
20p-Amp	Amp_12p13.33	0.00852	1
11p-Del	Del_19p13.3	0.00855	1
17q-Del	Amp_8q24.21	0.00855	1
20q-Amp	9q-Del	0.00859	1
MYH9	NF1	0.00864	1
FRMPD2	GPRIN2	0.00865	1
IRS4	RBMX	0.00865	1
Amp_8p11.23	Del_6q27	0.00868	1
Del_9p23	Del_21q11.2	0.00869	1
IL1RAP	MYH9	0.00871	1
5p-Amp	Amp_8p11.21	0.00871	1
Amp_6q21	Del_20p13	0.00871	1
Amp_11p13	Del_17q21.31	0.00873	1
GATA3	NCOR1	0.00874	1
Amp_11q14.1	Del_9p21.3	0.00875	1
CBFB	PIK3CA	0.00878	1
Del_12q23.1	Del_16q24.3	0.00878	1
Amp_4q13.3	Del_8p23.2	0.00881	1
20p-Amp	Amp_19q13.42	0.00883	1
KCNN3	Amp_10p15.1	0.00884	1
C17orf95	SPEN	0.00886	1
17q-Del	Del_11q25	0.00886	1
15q-Del	9q-Del	0.00887	1
15q-Del	Del_20p13	0.00887	1
Amp_4q13.3	Amp_15q26.3	0.00889	1
EYS	SMAD2	0.00891	1
8q-Amp	5q-Del	0.009	1
Amp_4q13.3	Del_15q13.1	0.00906	1
1q-Del	Del_9p21.3	0.00908	1
7q-Amp	Amp_3q26.32	0.00914	1
EYS	Amp_10q22.3	0.00917	1
Amp_11q13.3	Del_1p36.13	0.00921	1
ZFP36L1	Del_14q24.1	0.00923	1
17q-Del	Del_6q15	0.00926	1
Amp_6q21	Del_11p15.5	0.00926	1
Amp_6q21	Del_14q24.1	0.00926	1
5q-Del	Amp_19p13.12	0.00927	1
PTPN22	20p-Amp	0.00929	1
Amp_12p13.33	Del_13q14.2	0.00932	1
18q-Del	Del_11p15.5	0.00934	1
15q-Del	Del_10q23.31	0.00936	1
1p-Del	4q-Del	0.00943	1
CDC42EP1	HRNR	0.00945	1
KDM6A	PTPN22	0.00949	1
GATA3	Del_22q13.32	0.0095	1
CDH1	PTEN	0.00958	1
Del_2q37.3	Del_11q25	0.00964	1
KDM6A	SPEN	0.00965	1
MAP3K1	Amp_8p11.21	0.00965	1
18q-Del	Del_7q36.1	0.00966	1
Amp_6q21	Amp_8q24.21	0.00967	1
Amp_8p11.21	Del_5q21.3	0.0097	1
Amp_19p13.12	Del_5q21.3	0.00971	1
Del_6q27	Del_10q23.31	0.00974	1
17q-Amp	8p-Amp	0.00975	1
Amp_15q26.3	Del_5q11.2	0.00975	1
Amp_1p22.3	Del_14q24.1	0.00977	1
Amp_4q13.3	Amp_8q24.21	0.00977	1
4p-Del	Amp_17q23.1	0.00982	1
Amp_11q13.3	Del_1p22.1	0.00982	1
ARID1A	RUFY1	0.00984	1
Amp_3q26.32	Amp_11p13	0.00984	1
Amp_3p25.1	Del_8p23.2	0.00986	1
KCNN3	Del_8p23.2	0.00989	1
Amp_11q13.3	Del_11p15.5	0.00989	1
7p-Amp	Del_9p21.3	0.00993	1
TP53	Amp_8p11.21	0.00994	1
17q-Amp	Amp_11q13.3	0.00994	1
5q-Del	Del_6q27	0.0101	1
Amp_3p25.1	Del_21q11.2	0.0101	1
Amp_8p11.23	Del_20p13	0.0101	1
Amp_11q14.1	Del_11p15.5	0.0101	1
Del_9p21.3	Del_12q23.1	0.0101	1
TP53	Amp_3p25.1	0.0102	1
TP53	Del_7p22.3	0.0102	1
20p-Amp	Amp_11p13	0.0102	1
Amp_11q13.3	Del_17p12	0.0102	1
11q-Del	Del_5q21.3	0.0103	1
Amp_3p25.1	Del_1p36.13	0.0103	1
Amp_15q26.3	Del_8p23.2	0.0103	1
1p-Del	Amp_8p11.23	0.0104	1
Amp_6p23	Amp_14q21.1	0.0104	1
Amp_8p11.23	Amp_14q21.1	0.0104	1
16p-Amp	Del_22q13.32	0.0105	1
17q-Del	Del_1p22.1	0.0105	1
FBXW7	HRNR	0.0106	1
GATA3	Del_9p23	0.0106	1
NF1	PIK3CA	0.0106	1
NF1	RUFY1	0.0106	1
18p-Del	Amp_11q14.1	0.0106	1
4q-Del	Amp_15q26.3	0.0106	1
6q-Del	Del_18q23	0.0106	1
13q-Del	Del_12q23.1	0.0107	1
16q-Del	Del_6p25.3	0.0107	1
Amp_8p11.21	Del_5q11.2	0.0107	1
Amp_19p13.12	Del_12p13.1	0.0107	1
Amp_8p11.21	Amp_11p13	0.0108	1
Del_1p22.1	Del_6q27	0.0108	1
11q-Del	Del_4p16.3	0.011	1
11q-Del	Del_5q11.2	0.011	1
Amp_3q26.32	Del_12q23.1	0.011	1
Amp_3q26.32	Del_14q24.1	0.011	1
Amp_10p15.1	Amp_14q21.1	0.011	1
15q-Del	Amp_10p15.1	0.0111	1
16p-Del	Amp_19q12	0.0111	1
7p-Amp	Amp_19q13.42	0.0112	1
17q-Del	Del_12p13.1	0.0112	1
Amp_6q21	Amp_11p13	0.0112	1
Del_6p25.3	Del_17q21.31	0.0112	1
16p-Del	Amp_13q34	0.0113	1
Amp_1q21.3	Del_13q14.2	0.0113	1
Del_18q23	Del_19q13.32	0.0113	1
RUFY1	RUNX1	0.0114	1
11q-Del	Del_19q13.32	0.0114	1
5q-Del	Amp_3q26.32	0.0114	1
FBXW7	IRS4	0.0115	1
Amp_8p11.21	Amp_12q15	0.0115	1
Amp_8p11.21	Del_19p13.3	0.0115	1
APC	SPEN	0.0116	1
MYH9	SPEN	0.0116	1
TP53	Del_8p23.2	0.0116	1
VCPIP1	Amp_19q13.42	0.0116	1
8p-Amp	Amp_10q22.3	0.0116	1
EYS	TPP2	0.0117	1
SMAD4	Del_12p13.1	0.0117	1
VCPIP1	20q-Amp	0.0117	1
Amp_3q26.32	Del_1p36.13	0.0117	1
Del_14q24.1	Del_21q11.2	0.0118	1
4q-Del	Del_7p22.3	0.012	1
5q-Del	Del_7p22.3	0.012	1
Amp_1q21.3	Amp_12p13.33	0.012	1
Amp_6p23	Del_7q36.1	0.012	1
CASZ1	FRMPD2	0.0121	1
ERBB2	TBL1XR1	0.0122	1
15q-Del	Del_7q36.1	0.0122	1
1q-Del	9p-Del	0.0122	1
FRMPD2	NCOR1	0.0123	1
5p-Amp	8q-Amp	0.0123	1
Amp_17q23.1	Del_4q35.1	0.0123	1
Amp_20q13.2	Del_17p12	0.0123	1
Del_6p25.3	Del_7q36.1	0.0123	1
Del_6q27	Del_12p13.1	0.0123	1
AQP12A	20p-Amp	0.0124	1
ICOSLG	Del_11q13.1	0.0124	1
TP53	Del_13q14.2	0.0124	1
Amp_11p13	Del_5q11.2	0.0124	1
Amp_11q14.1	Del_19p13.3	0.0124	1
8q-Amp	Amp_19p13.12	0.0125	1
Amp_11p13	Del_19p13.3	0.0125	1
Amp_15q26.3	Del_11q25	0.0125	1
Del_9q21.11	Del_12p13.1	0.0125	1
PIK3CA	Amp_1q44	0.0126	1
C17orf95	16p-Del	0.0127	1
EYS	Del_17q21.31	0.0127	1
18q-Del	Del_15q13.1	0.0127	1
Amp_12q15	Del_13q14.2	0.0127	1
Del_7q36.1	Del_13q14.2	0.0127	1
Del_11q13.1	Del_14q24.1	0.0127	1
ZFP36L1	Del_18q23	0.0128	1
ZFP36L1	Del_20p13	0.0129	1
14q-Del	Amp_6q21	0.0129	1
22q-Del	Amp_13q34	0.0129	1
Amp_6q21	Amp_19q12	0.0129	1
SP3	SPEN	0.013	1
15q-Del	Del_16q24.3	0.013	1
8p-Del	Del_9q21.11	0.013	1
APC	GPRIN2	0.0131	1
APC	IRS4	0.0131	1
APC	NLGN3	0.0131	1
IRS4	MYH9	0.0131	1
13q-Del	Amp_19p13.12	0.0131	1
4p-Del	Amp_19q12	0.0131	1
Del_4p16.3	Del_9q21.11	0.0131	1
18q-Del	Amp_11q13.3	0.0132	1
9p-Del	Amp_15q26.3	0.0132	1
5q-Del	Del_22q13.32	0.0133	1
Amp_3q26.32	Del_19p13.3	0.0133	1
20q-Amp	Amp_19q13.42	0.0134	1
8p-Del	Del_6q27	0.0134	1
Del_4q35.1	Del_6q27	0.0134	1
15q-Del	Amp_19q12	0.0135	1
18p-Del	Amp_12p13.33	0.0135	1
Del_9q21.11	Del_11p15.5	0.0135	1
Del_11q13.1	Del_22q13.32	0.0135	1
ACTL6B	17p-Del	0.0136	1
ARID1A	SMAD4	0.0136	1
MED23	Del_6q27	0.0136	1
Amp_3q26.32	Del_17q21.31	0.0136	1
Amp_15q26.3	Del_22q13.32	0.0136	1
KDM6A	TGS1	0.0137	1
16p-Amp	7q-Amp	0.0137	1
8q-Amp	Amp_19q12	0.0137	1
8q-Amp	Del_21q11.2	0.0137	1
SPEN	TAF1L	0.0138	1
EYS	Del_10q23.31	0.0139	1
Amp_4q13.3	Amp_14q21.1	0.0139	1
CASZ1	MUC6	0.014	1
FRMPD2	PIK3R1	0.014	1
PIK3R1	17q-Del	0.014	1
16p-Amp	Amp_12q15	0.014	1
AQP12A	18q-Del	0.0141	1
C17orf95	NCOR1	0.0141	1
CTCF	16q-Del	0.0141	1
RUFY1	18q-Del	0.0141	1
5p-Amp	Amp_12p13.33	0.0141	1
Amp_14q21.1	Del_13q14.2	0.0141	1
Amp_19q13.42	Del_9q21.11	0.0141	1
NF1	PTEN	0.0142	1
16p-Amp	Amp_1q44	0.0142	1
MED23	PIK3CA	0.0143	1
11q-Del	Amp_17q12	0.0143	1
17p-Del	Amp_15q26.3	0.0143	1
17p-Del	Del_7q36.1	0.0143	1
Amp_11q14.1	Amp_20q13.2	0.0143	1
Amp_12q15	Del_11q25	0.0143	1
1q-Del	Amp_13q34	0.0144	1
22q-Del	Del_4q35.1	0.0144	1
Amp_12p13.33	Del_19q13.32	0.0144	1
Amp_19p13.12	Del_3p21.31	0.0144	1
AQP12A	18p-Del	0.0145	1
RUFY1	18p-Del	0.0145	1
Amp_6p23	Del_4p16.3	0.0145	1
NF1	SMAD2	0.0146	1
SMAD2	TBX3	0.0146	1
11q-Del	Del_7q36.1	0.0146	1
Amp_8p11.23	Del_1p36.13	0.0146	1
NLGN3	TAF1L	0.0147	1
14q-Del	Amp_11q14.1	0.0147	1
8p-Del	Del_5q11.2	0.0147	1
Amp_12p13.33	Amp_20q13.2	0.0147	1
Amp_20q13.2	Del_9q21.11	0.0147	1
C17orf95	17q-Amp	0.0148	1
Amp_11q14.1	Del_10q23.31	0.0148	1
Del_4p16.3	Del_7p22.3	0.0148	1
EYS	IL1RAP	0.0149	1
GATA3	SP3	0.0149	1
11p-Del	Amp_17q12	0.0149	1
15q-Del	Amp_12p13.33	0.0149	1
TBX3	Amp_1q21.3	0.015	1
8q-Amp	Amp_3q26.32	0.015	1
KCNN3	Del_14q24.1	0.0151	1
16q-Del	8p-Del	0.0151	1
Amp_1p22.3	Del_4p16.3	0.0151	1
Amp_3p25.1	Del_19q13.32	0.0151	1
Amp_8q24.21	Del_11q23.3	0.0151	1
ZFP36L1	14q-Del	0.0152	1
Amp_11q13.3	Del_13q14.2	0.0152	1
Amp_19q13.42	Del_8p23.2	0.0152	1
Del_1p22.1	Del_2q37.3	0.0152	1
Del_9p23	Del_12p13.1	0.0152	1
8q-Amp	Amp_11p13	0.0154	1
CBFB	Del_7q36.1	0.0155	1
17q-Del	Del_10q23.31	0.0155	1
4q-Del	8p-Del	0.0155	1
Amp_8q24.21	Del_12p13.1	0.0155	1
Amp_19q12	Del_13q14.2	0.0155	1
TAF1L	Del_17q21.31	0.0156	1
15q-Del	6q-Del	0.0156	1
1q-Del	Del_1p22.1	0.0156	1
Amp_1q21.3	Amp_8p11.21	0.0156	1
Amp_6p23	Del_10q26.3	0.0156	1
15q-Del	Del_8p23.2	0.0157	1
9q-Del	Del_8p23.2	0.0157	1
Amp_8p11.21	Del_14q24.1	0.0157	1
Amp_14q21.1	Del_4p16.3	0.0158	1
CBFB	GATA3	0.0159	1
MED23	Del_6q15	0.0159	1
SF3B1	Del_10q26.3	0.0159	1
Amp_1p22.3	Amp_13q34	0.0159	1
FRMPD2	ZMYM3	0.016	1
KDM6A	RBMX	0.016	1
Amp_20q13.2	Del_11q25	0.016	1
5p-Amp	Amp_1q44	0.0161	1
1q-Del	Del_5q11.2	0.0161	1
IRS4	Del_12q23.1	0.0162	1
17q-Amp	Amp_8p11.23	0.0162	1
7p-Amp	Del_16q24.3	0.0162	1
22q-Del	Del_12q24.31	0.0162	1
9q-Del	Del_11p15.5	0.0162	1
Amp_13q34	Del_12q23.1	0.0162	1
Del_5q21.3	Del_21q11.2	0.0162	1
CBFB	TBL1XR1	0.0163	1
Amp_17q23.1	Del_1p22.1	0.0163	1
Del_6q27	Del_12q24.31	0.0163	1
MAP3K1	ZFP36L1	0.0164	1
PTPN22	Amp_17q12	0.0164	1
8p-Amp	Amp_17q23.1	0.0164	1
18p-Del	Amp_17q23.1	0.0164	1
Del_7q36.1	Del_9q34.2	0.0164	1
PAX2	ZNF362	0.0165	1
Amp_3q26.32	Del_9p21.3	0.0165	1
Amp_8q24.21	Del_11q25	0.0165	1
Del_1p22.1	Del_6q15	0.0165	1
SF3B1	Del_10q23.31	0.0166	1
13q-Del	5q-Del	0.0166	1
Amp_3p25.1	Del_6p25.3	0.0166	1
Amp_3p25.1	Del_9p23	0.0166	1
Amp_19q13.42	Del_4q35.1	0.0166	1
20q-Amp	Amp_12p13.33	0.0167	1
Amp_10p15.1	Amp_15q26.3	0.0167	1
ARID1A	EYS	0.0168	1
EYS	Amp_3q26.32	0.0168	1
16q-Del	Del_14q24.1	0.0168	1
ACTL6B	Amp_8q24.21	0.0169	1
18q-Del	9q-Del	0.017	1
15q-Del	Amp_15q26.3	0.0171	1
16q-Del	9p-Del	0.0171	1
Amp_11q13.3	Del_6q15	0.0171	1
1p-Del	Amp_17q12	0.0172	1
Amp_12q15	Del_6q15	0.0172	1
Amp_14q21.1	Amp_17q12	0.0172	1
Del_9p23	Del_12q23.1	0.0173	1
AQP12A	Amp_20q13.2	0.0174	1
TP53	15q-Del	0.0174	1
8q-Amp	Amp_10q22.3	0.0174	1
18p-Del	Del_5q11.2	0.0174	1
Del_1p22.1	Del_12p13.1	0.0174	1
MYB	TAF1L	0.0175	1
NCOR1	PIK3CA	0.0175	1
18q-Del	Del_12p13.1	0.0175	1
PTEN	9p-Del	0.0176	1
8p-Amp	Del_10q26.3	0.0176	1
Amp_8p11.21	Amp_10p15.1	0.0176	1
ARID1A	USP36	0.0178	1
PTPN22	20q-Amp	0.0178	1
Del_7q36.1	Del_8p23.2	0.0178	1
SMAD2	SPEN	0.0179	1
SMAD4	SPEN	0.0179	1
17q-Amp	13q-Del	0.0179	1
Amp_13q34	Amp_14q21.1	0.018	1
Amp_19p13.12	Del_12q24.31	0.018	1
AQP12A	Del_22q13.32	0.0181	1
20p-Amp	Amp_17q12	0.0181	1
16p-Del	Amp_8p11.23	0.0181	1
APC	FRMPD2	0.0182	1
APC	RBMX	0.0182	1
MYH9	RBMX	0.0182	1
Amp_8p11.23	Amp_12q15	0.0182	1
14q-Del	Amp_10p15.1	0.0183	1
Amp_8q24.21	Amp_15q26.3	0.0183	1
8p-Amp	Amp_17q12	0.0184	1
11p-Del	Amp_1q21.3	0.0184	1
Amp_10p15.1	Del_14q24.1	0.0184	1
FBXW7	PIK3R1	0.0185	1
FOXA1	Del_11q25	0.0185	1
KDM6A	MED23	0.0185	1
PIK3R1	ZMYM3	0.0185	1
20p-Amp	Amp_6p23	0.0185	1
15q-Del	Amp_1q21.3	0.0185	1
Amp_8p11.21	Del_16q24.3	0.0185	1
TP53	Del_19q13.32	0.0186	1
20q-Amp	6q-Del	0.0186	1
11q-Del	Amp_8p11.21	0.0186	1
Del_4p16.3	Del_6q15	0.0186	1
15q-Del	Amp_19p13.12	0.0187	1
Amp_17q23.1	Del_4p16.3	0.0187	1
Amp_19p13.12	Del_20p13	0.0187	1
Amp_19q12	Del_15q13.1	0.0187	1
4p-Del	Amp_8q24.21	0.0188	1
6q-Del	Del_7p22.3	0.0189	1
Del_1p22.1	Del_19q13.32	0.0189	1
TBX3	ZFP36L1	0.0191	1
TFE3	Del_5q21.3	0.0191	1
USP36	Del_6p25.3	0.0191	1
ZFP36L1	Del_6p25.3	0.0191	1
USP36	Del_13q14.2	0.0192	1
Amp_6q21	Del_17p12	0.0192	1
Del_9p23	Del_16q24.3	0.0192	1
14q-Del	Del_11q13.1	0.0193	1
8p-Amp	Del_10q23.31	0.0194	1
4q-Del	Del_6q27	0.0194	1
Amp_8p11.21	Amp_19q13.42	0.0194	1
GATA3	9p-Del	0.0195	1
TGS1	Amp_1q44	0.0195	1
PTPN22	Del_4q35.1	0.0196	1
20q-Amp	Amp_11q14.1	0.0196	1
1q-Del	Del_4q35.1	0.0196	1
Amp_6q21	Del_12q24.31	0.0196	1
CDH1	ICOSLG	0.0197	1
14q-Del	Amp_10q22.3	0.0197	1
Amp_14q21.1	Del_8p23.2	0.0197	1
17q-Amp	Amp_19q13.42	0.0198	1
16q-Del	Amp_1p22.3	0.0198	1
Amp_4q13.3	Amp_6q21	0.0198	1
Amp_4q13.3	Amp_19q13.42	0.0198	1
Del_12p13.1	Del_20p13	0.0198	1
11p-Del	Del_2q37.3	0.0199	1
14q-Del	Amp_1p22.3	0.0199	1
Amp_6p23	Amp_11p13	0.0201	1
MAP2K4	16p-Amp	0.0202	1
5q-Del	9p-Del	0.0202	1
Amp_1p22.3	Del_1p36.13	0.0202	1
Amp_15q26.3	Del_18q23	0.0202	1
SMAD2	Del_11q13.1	0.0203	1
14q-Del	17q-Del	0.0203	1
FRMPD2	TAF1L	0.0204	1
RBMX	TAF1L	0.0204	1
14q-Del	Del_16q24.3	0.0204	1
Amp_6p23	Del_19p13.3	0.0204	1
Del_11q25	Del_12p13.1	0.0204	1
ICOSLG	Del_8p23.2	0.0205	1
ERBB2	HRNR	0.0206	1
11q-Del	Del_20p13	0.0206	1
17p-Del	Amp_19p13.12	0.0206	1
Amp_11p13	Amp_17q23.1	0.0206	1
Del_11q23.3	Del_12q24.31	0.0206	1
Amp_1p22.3	Del_13q14.2	0.0207	1
IL1RAP	MLL3	0.0208	1
20q-Amp	7p-Amp	0.0209	1
APC	PIK3R1	0.021	1
FGFR2	Del_17p12	0.021	1
MUC6	MYH9	0.021	1
MYH9	PIK3R1	0.021	1
Amp_3p25.1	Del_9p21.3	0.021	1
Amp_8q24.21	Del_11q13.1	0.021	1
PTEN	TAF1L	0.0211	1
Amp_1q44	Del_11q25	0.0211	1
Amp_8q24.21	Del_14q24.1	0.0211	1
Del_4q35.1	Del_9q21.11	0.0211	1
KDM6A	ZMYM3	0.0212	1
8p-Amp	Amp_1q21.3	0.0212	1
AQP12A	Amp_11q13.3	0.0213	1
ICOSLG	Amp_11q13.3	0.0213	1
11p-Del	Amp_17q23.1	0.0214	1
17q-Del	Amp_3q26.32	0.0215	1
Amp_3p25.1	Del_15q13.1	0.0215	1
Amp_13q34	Del_20p13	0.0215	1
KCNN3	Del_21q11.2	0.0216	1
MYB	RB1	0.0216	1
14q-Del	Del_12q23.1	0.0216	1
8p-Del	Del_12p13.1	0.0217	1
Amp_8p11.23	Del_1p22.1	0.0217	1
Amp_6q21	Del_6p25.3	0.0218	1
ARID1A	8p-Del	0.0219	1
16p-Del	Amp_15q26.3	0.0219	1
Amp_8p11.23	Del_21q11.2	0.0219	1
Amp_10q22.3	Del_5q11.2	0.0219	1
IRS4	Amp_11p13	0.022	1
Amp_8p11.23	Amp_11q14.1	0.0221	1
Amp_10p15.1	Amp_11p13	0.0221	1
ZFP36L1	Del_1p36.13	0.0222	1
11q-Del	Del_15q13.1	0.0222	1
8p-Del	Amp_11q14.1	0.0222	1
Amp_10q22.3	Del_9p23	0.0222	1
Amp_15q26.3	Del_14q24.1	0.0222	1
FOXA1	MAP3K1	0.0223	1
1p-Del	4p-Del	0.0223	1
1p-Del	Del_7q36.1	0.0223	1
Amp_12p13.33	Del_21q11.2	0.0223	1
11q-Del	4q-Del	0.0224	1
Amp_17q23.1	Del_15q13.1	0.0224	1
Del_7p22.3	Del_12q24.31	0.0224	1
Del_10q23.31	Del_12q23.1	0.0224	1
Amp_3q26.32	Del_11p15.5	0.0226	1
Amp_4q13.3	Amp_17q12	0.0226	1
Amp_12q15	Amp_15q26.3	0.0226	1
Amp_15q26.3	Del_7q36.1	0.0226	1
20q-Amp	Del_11q25	0.0227	1
Amp_11p13	Del_18q23	0.0228	1
SMAD4	18q-Del	0.0229	1
20q-Amp	18p-Del	0.0229	1
1q-Del	Del_14q24.1	0.0229	1
Del_2q37.3	Del_16q24.3	0.0229	1
TP53	16p-Del	0.023	1
1q-Del	Del_11q25	0.0231	1
4q-Del	Amp_10p15.1	0.0231	1
Amp_1q21.3	Del_15q13.1	0.0231	1
Del_9p23	Del_11q13.1	0.0231	1
11q-Del	Del_12q24.31	0.0232	1
1q-Del	Del_8p23.2	0.0233	1
Amp_19q13.42	Del_11p15.5	0.0233	1
Del_2q37.3	Del_11q13.1	0.0233	1
EYS	Del_2q37.3	0.0234	1
MAP3K1	TBL1XR1	0.0234	1
8p-Amp	Amp_10p15.1	0.0234	1
Amp_11p13	Del_5q21.3	0.0234	1
Amp_12p13.33	Del_12q23.1	0.0234	1
Amp_12p13.33	Del_12q24.31	0.0234	1
Amp_13q34	Amp_19p13.12	0.0236	1
Amp_14q21.1	Del_15q13.1	0.0236	1
Amp_20q13.2	Del_14q24.1	0.0237	1
Del_9p21.3	Del_16q24.3	0.0237	1
18q-Del	6q-Del	0.0238	1
Amp_19p13.12	Del_17p12	0.0238	1
9q-Del	Del_7p22.3	0.0239	1
Amp_1q21.3	Del_16q24.3	0.0239	1
Amp_3p25.1	Del_20p13	0.0239	1
Del_6q27	Del_11p15.5	0.0239	1
Del_7p22.3	Del_20p13	0.0239	1
KDM6A	MYH9	0.024	1
IL1RAP	NF1	0.0241	1
IL1RAP	TBX3	0.0241	1
20p-Amp	Amp_6q21	0.0241	1
5p-Amp	7q-Amp	0.0241	1
Amp_8p11.23	Del_9p21.3	0.0241	1
Del_5q11.2	Del_7q36.1	0.0241	1
Amp_11q14.1	Del_19q13.32	0.0242	1
Amp_14q21.1	Amp_19q12	0.0242	1
GATA3	Amp_1q44	0.0243	1
1q-Del	Del_19p13.3	0.0243	1
Amp_1p22.3	Del_19p13.3	0.0243	1
Amp_4q13.3	Amp_11q13.3	0.0243	1
Amp_1q44	Del_12q23.1	0.0244	1
9p-Del	Del_7p22.3	0.0245	1
Amp_3p25.1	Del_10q26.3	0.0245	1
Del_6q15	Del_19q13.32	0.0245	1
22q-Del	Amp_17q23.1	0.0246	1
RUFY1	ZBTB7C	0.0247	1
7p-Amp	Amp_20q13.2	0.0247	1
CDC42EP1	Amp_14q21.1	0.0248	1
NBPF9	1p-Del	0.0248	1
7p-Amp	8p-Amp	0.0248	1
EYS	Del_15q13.1	0.025	1
GATA3	16q-Del	0.025	1
MYH9	Amp_1q44	0.025	1
16q-Del	Amp_8p11.21	0.025	1
1q-Del	9q-Del	0.025	1
KCNN3	Del_12p13.1	0.0252	1
Amp_3p25.1	Amp_17q12	0.0252	1
CASZ1	ERBB2	0.0253	1
CASZ1	RB1	0.0253	1
ERBB2	FRMPD2	0.0253	1
FRMPD2	RB1	0.0253	1
SP3	Del_14q24.1	0.0253	1
14q-Del	Amp_19p13.12	0.0254	1
17q-Del	Amp_19p13.12	0.0254	1
1p-Del	Del_6q15	0.0255	1
Amp_10p15.1	Del_12q23.1	0.0255	1
Amp_11q13.3	Del_6q27	0.0255	1
Amp_17q23.1	Del_22q13.32	0.0255	1
MUC6	Del_19q13.32	0.0256	1
TCP11	Amp_8p11.23	0.0256	1
TP53	Del_9p23	0.0256	1
18p-Del	Del_6q27	0.0256	1
Amp_11q13.3	Del_18q23	0.0256	1
Del_16q24.3	Del_18q23	0.0256	1
NCOR1	Del_7p22.3	0.0257	1
PTEN	9q-Del	0.0257	1
Amp_3q26.32	Del_9q34.2	0.0257	1
Amp_6p23	Amp_19p13.12	0.0257	1
Amp_14q21.1	Del_18q23	0.0257	1
Del_1p36.13	Del_7p22.3	0.0258	1
EYS	Del_9p21.3	0.0259	1
8p-Amp	Del_13q14.2	0.0259	1
18p-Del	Amp_12q15	0.0259	1
18p-Del	Del_7q36.1	0.0259	1
PIK3R1	17p-Del	0.026	1
TP53	Del_12q23.1	0.026	1
TP53	Del_12q24.31	0.026	1
Del_1p36.13	Del_6p25.3	0.026	1
Del_7p22.3	Del_10q23.31	0.026	1
PTEN	Del_1p22.1	0.0262	1
1p-Del	Del_9q21.11	0.0262	1
5q-Del	Amp_10q22.3	0.0262	1
Amp_4q13.3	Del_4q35.1	0.0262	1
Amp_10q22.3	Amp_19p13.12	0.0262	1
Del_9q21.11	Del_16q24.3	0.0262	1
NCOR1	TAF1L	0.0263	1
Del_6q27	Del_7q36.1	0.0263	1
5q-Del	Del_11q23.3	0.0264	1
Amp_1q44	Amp_3p25.1	0.0264	1
KCNN3	TP53	0.0265	1
18q-Del	Del_19q13.32	0.0266	1
CDC42EP1	Amp_13q34	0.0267	1
MLL3	TAF1L	0.0269	1
PAX2	Del_7q36.1	0.0269	1
13q-Del	Amp_1p22.3	0.0269	1
Amp_15q26.3	Del_9q21.11	0.027	1
RAB42	Amp_1q21.3	0.0272	1
Amp_8q24.21	Del_6q15	0.0272	1
6q-Del	Del_9q21.11	0.0274	1
Amp_8q24.21	Del_17q21.31	0.0274	1
Amp_19p13.12	Del_9q21.11	0.0274	1
Del_12q24.31	Del_19q13.32	0.0274	1
CTCF	Del_12p13.1	0.0275	1
Amp_10p15.1	Amp_20q13.2	0.0275	1
Amp_17q12	Del_9p21.3	0.0275	1
EYS	Amp_19q13.42	0.0276	1
Amp_19q13.42	Del_9q34.2	0.0276	1
HRNR	Del_10q26.3	0.0278	1
20q-Amp	Del_10q26.3	0.0278	1
NCOR1	TFE3	0.0281	1
TP53	Del_9q21.11	0.0281	1
5q-Del	Amp_8p11.21	0.0281	1
Amp_12p13.33	Del_17q21.31	0.0281	1
CDKN1B	MLL3	0.0282	1
MLL3	PTPN22	0.0282	1
PTPN22	Amp_12q15	0.0282	1
Amp_17q12	Del_7q36.1	0.0282	1
ICOSLG	Del_16q24.3	0.0283	1
AQP12A	7p-Amp	0.0284	1
SMAD2	Del_17p12	0.0284	1
1p-Del	Del_17p12	0.0284	1
Amp_3q26.32	Del_2q37.3	0.0285	1
20q-Amp	Del_11q13.1	0.0286	1
6q-Del	Del_1p36.13	0.0286	1
CDC42EP1	Amp_19q13.42	0.0287	1
4p-Del	Del_6q27	0.0287	1
CBFB	16p-Amp	0.0288	1
MLL3	Del_16q24.3	0.0288	1
TFE3	ZNF362	0.0288	1
ZBTB7C	ZFP36L2	0.0288	1
7q-Amp	Amp_1p22.3	0.0288	1
16q-Del	Del_17q21.31	0.0289	1
Amp_17q12	Del_12p13.1	0.0289	1
Del_3p21.31	Del_11q13.1	0.0289	1
Del_9p21.3	Del_11q13.1	0.0289	1
Amp_11p13	Amp_13q34	0.029	1
USP36	13q-Del	0.0291	1
ZFP36L1	13q-Del	0.0291	1
ERBB2	MED23	0.0292	1
MAP3K1	PAX2	0.0292	1
PIK3R1	RB1	0.0292	1
ACTL6B	Amp_19q12	0.0293	1
FOXA1	16q-Del	0.0293	1
14q-Del	1q-Del	0.0293	1
Amp_3p25.1	Amp_10p15.1	0.0294	1
IL1RAP	SPEN	0.0295	1
SPEN	VCPIP1	0.0295	1
CDC42EP1	Amp_11p13	0.0297	1
14q-Del	Amp_13q34	0.0299	1
15q-Del	Del_19q13.32	0.0299	1
Amp_13q34	Del_21q11.2	0.0299	1
MLL3	20q-Amp	0.03	1
Amp_8p11.23	Amp_11p13	0.03	1
20p-Amp	9q-Del	0.0301	1
17q-Del	Del_6q27	0.0302	1
4p-Del	Amp_15q26.3	0.0302	1
Amp_11p13	Amp_19p13.12	0.0302	1
13q-Del	Amp_3q26.32	0.0303	1
APC	TAF1L	0.0304	1
MYH9	TAF1L	0.0304	1
PTPN22	Del_17q21.31	0.0304	1
1q-Del	Del_17q21.31	0.0304	1
1q-Del	Amp_12p13.33	0.0305	1
Amp_8q24.21	Del_19q13.32	0.0305	1
CASZ1	EYS	0.0306	1
EYS	RBMX	0.0306	1
Amp_10q22.3	Del_15q13.1	0.0307	1
C17orf95	KRAS	0.0308	1
C17orf95	RUFY1	0.0308	1
C17orf95	SP3	0.0308	1
CDC42EP1	SP3	0.0308	1
MUC6	Del_5q21.3	0.0308	1
Amp_1p22.3	Del_10q26.3	0.0308	1
ZFP36L2	Amp_10q22.3	0.031	1
Amp_11p13	Del_4p16.3	0.031	1
FOXA1	MYB	0.0312	1
PTPN22	Del_18q23	0.0312	1
1q-Del	Del_18q23	0.0312	1
CDH1	FOXA1	0.0313	1
GATA3	Del_16q24.3	0.0314	1
20p-Amp	Del_18q23	0.0314	1
Del_11q13.1	Del_18q23	0.0314	1
CDH1	SMAD2	0.0318	1
15q-Del	Amp_8q24.21	0.0318	1
5p-Amp	Amp_6q21	0.0319	1
Amp_6q21	Amp_19q13.42	0.0319	1
16q-Del	Del_7q36.1	0.032	1
Del_7p22.3	Del_19p13.3	0.032	1
KCNN3	Del_3p21.31	0.0321	1
KCNN3	Del_9p21.3	0.0321	1
20q-Amp	Del_3p21.31	0.0322	1
Amp_3p25.1	Amp_19q12	0.0322	1
Amp_10p15.1	Del_8p23.2	0.0322	1
Amp_19q12	Del_7p22.3	0.0322	1
Del_6q27	Del_10q26.3	0.0322	1
Del_7p22.3	Del_21q11.2	0.0322	1
ACTL6B	8p-Del	0.0323	1
Amp_13q34	Del_17q21.31	0.0323	1
Amp_17q23.1	Del_12q23.1	0.0323	1
Amp_8p11.21	Del_9q21.11	0.0324	1
AQP12A	Del_18q23	0.0325	1
SF3B1	Del_11q25	0.0325	1
Amp_17q12	Del_21q11.2	0.0325	1
FOXA1	Del_11q23.3	0.0326	1
Amp_6q21	Del_13q14.2	0.0326	1
8q-Amp	Del_1p36.13	0.0327	1
15q-Del	16q-Del	0.0327	1
TPP2	Del_16q24.3	0.0329	1
ZFP36L1	Del_16q24.3	0.0329	1
1p-Del	Del_12p13.1	0.0329	1
Del_4q35.1	Del_16q24.3	0.0329	1
EYS	Del_19p13.3	0.033	1
Amp_3q26.32	Amp_14q21.1	0.033	1
CDH1	TGS1	0.0331	1
PTEN	1p-Del	0.0331	1
5p-Amp	Amp_11q14.1	0.0331	1
13q-Del	Amp_11q14.1	0.0331	1
8p-Del	Amp_19q13.42	0.0331	1
Amp_3q26.32	Del_7p22.3	0.0331	1
Amp_11q14.1	Amp_19q13.42	0.0331	1
Amp_12q15	Del_3p21.31	0.0331	1
ARID1A	NF1	0.0332	1
ERBB2	FBXW7	0.0332	1
ZFP36L1	6q-Del	0.0332	1
CDH1	Amp_1q21.3	0.0333	1
RB1	9p-Del	0.0333	1
1p-Del	Amp_1q44	0.0334	1
1p-Del	Del_5q21.3	0.0334	1
8p-Del	Amp_14q21.1	0.0334	1
7p-Amp	Del_7q36.1	0.0335	1
9p-Del	Del_21q11.2	0.0335	1
Amp_11q14.1	Del_21q11.2	0.0335	1
7p-Amp	Amp_10p15.1	0.0337	1
8q-Amp	Del_6q27	0.0337	1
6q-Del	Amp_20q13.2	0.0337	1
ARID1A	Amp_11q13.3	0.0338	1
17p-Del	Amp_8q24.21	0.0338	1
Amp_4q13.3	Del_19q13.32	0.0338	1
Amp_10p15.1	Del_1p36.13	0.0338	1
Amp_12q15	Amp_19q13.42	0.0338	1
Amp_17q23.1	Del_19q13.32	0.0338	1
18q-Del	Del_10q26.3	0.034	1
Amp_6p23	Del_9q34.2	0.034	1
ZFP36L1	18q-Del	0.0341	1
8p-Amp	Amp_19q13.42	0.0341	1
Amp_17q12	Del_11q13.1	0.0341	1
9p-Del	Amp_6p23	0.0342	1
Amp_4q13.3	Del_2q37.3	0.0342	1
TGS1	1q-Amp	0.0343	1
5p-Amp	Amp_3p25.1	0.0343	1
Amp_6q21	Del_7p22.3	0.0343	1
8p-Del	Amp_17q12	0.0345	1
Amp_15q26.3	Del_12p13.1	0.0345	1
Del_5q11.2	Del_22q13.32	0.0345	1
GPS2	Del_16q24.3	0.0347	1
17q-Del	Del_6p25.3	0.0348	1
4q-Del	Amp_13q34	0.0349	1
ZFP36L1	18p-Del	0.0351	1
4q-Del	Del_12p13.1	0.0351	1
16p-Amp	Amp_19q13.42	0.0352	1
16p-Amp	22q-Del	0.0354	1
20p-Amp	8p-Del	0.0354	1
11q-Del	17q-Del	0.0354	1
ERBB2	NCOR1	0.0355	1
ZFP36L2	Amp_8p11.21	0.0355	1
FGFR2	TBX3	0.0356	1
7p-Amp	Amp_1p22.3	0.0357	1
Amp_6q21	Del_9p23	0.0357	1
16p-Del	Del_18q23	0.0358	1
16q-Del	18p-Del	0.0358	1
C17orf95	SMAD2	0.0359	1
C17orf95	SMAD4	0.0359	1
CDC42EP1	TFE3	0.0359	1
Amp_14q21.1	Del_19p13.3	0.0359	1
SMAD2	Del_15q13.1	0.036	1
7q-Amp	Amp_15q26.3	0.036	1
Amp_17q12	Del_6q27	0.036	1
MLL3	NF1	0.0361	1
MLL3	TBX3	0.0361	1
16p-Del	Del_1p36.13	0.0361	1
CDKN1B	SPEN	0.0362	1
Amp_1q44	Amp_10p15.1	0.0362	1
CASZ1	FOXA1	0.0363	1
MYH9	Amp_11q13.3	0.0363	1
8p-Amp	Del_6q15	0.0363	1
Amp_6q21	Amp_20q13.2	0.0363	1
Amp_10q22.3	Del_9q34.2	0.0365	1
CDH1	SPEN	0.0366	1
KCNN3	NCDN	0.0369	1
KRAS	RUFY1	0.0369	1
RUFY1	TCP11	0.0369	1
VCPIP1	ZBTB7C	0.0369	1
16p-Del	1p-Del	0.0369	1
PIK3CA	16p-Amp	0.037	1
Amp_20q13.2	Del_10q23.31	0.037	1
6q-Del	Del_12p13.1	0.0371	1
Amp_6p23	Del_2q37.3	0.0371	1
Amp_20q13.2	Del_15q13.1	0.0372	1
20q-Amp	Del_9q21.11	0.0373	1
Amp_11q14.1	Amp_12p13.33	0.0373	1
Amp_12q15	Del_19q13.32	0.0373	1
IL1RAP	PIK3CA	0.0374	1
PIK3CA	TBL1XR1	0.0374	1
20q-Amp	Amp_11p13	0.0374	1
FRMPD2	Amp_1p22.3	0.0375	1
APC	ERBB2	0.0376	1
Del_9p21.3	Del_21q11.2	0.0376	1
9p-Del	Amp_10q22.3	0.0378	1
7q-Amp	8q-Amp	0.0379	1
17q-Amp	Del_6q15	0.0381	1
8p-Amp	Amp_11p13	0.0382	1
FGFR2	17q-Del	0.0383	1
MED23	18q-Del	0.0383	1
20p-Amp	18q-Del	0.0383	1
ARID1A	Amp_17q23.1	0.0384	1
22q-Del	Amp_19p13.12	0.0384	1
Amp_12q15	Del_11q23.3	0.0384	1
FBXW7	Del_12q23.1	0.0385	1
KCNN3	Del_6q27	0.0386	1
17q-Del	Del_5q21.3	0.0386	1
18p-Del	8p-Del	0.0387	1
Amp_17q23.1	Del_10q26.3	0.0387	1
5p-Amp	Del_10q26.3	0.0388	1
8q-Amp	Del_6q15	0.0388	1
Amp_6q21	Del_10q26.3	0.0388	1
ARID1A	TGS1	0.0392	1
Amp_8q24.21	Amp_11q14.1	0.0393	1
20q-Amp	Amp_6p23	0.0394	1
Del_6q15	Del_7p22.3	0.0396	1
TP53	Del_9p21.3	0.0397	1
Amp_10q22.3	Del_14q24.1	0.0397	1
Amp_19q13.42	Del_15q13.1	0.0398	1
20q-Amp	Del_11p15.5	0.0399	1
1p-Del	Amp_8p11.21	0.0399	1
Amp_11q14.1	Del_14q24.1	0.0399	1
Amp_12p13.33	Del_10q23.31	0.0399	1
KCNN3	Del_5q21.3	0.0401	1
TP53	20q-Amp	0.0401	1
11q-Del	Amp_1q44	0.0401	1
Del_19q13.32	Del_21q11.2	0.0401	1
Amp_3p25.1	Del_17p12	0.0402	1
15q-Del	18q-Del	0.0403	1
Amp_15q26.3	Del_6p25.3	0.0404	1
Del_6q15	Del_21q11.2	0.0404	1
1q-Del	Del_9q34.2	0.0405	1
8p-Del	Amp_3p25.1	0.0406	1
Amp_1q21.3	Amp_3p25.1	0.0406	1
FOXA1	11q-Del	0.0407	1
TPP2	16q-Del	0.0407	1
RUNX1	1q-Amp	0.0408	1
4p-Del	Amp_11p13	0.0408	1
Amp_3q26.32	Del_6p25.3	0.0408	1
C17orf95	TPP2	0.0409	1
CDC42EP1	USP36	0.0409	1
NBPF9	ZFP36L1	0.0409	1
7p-Amp	Amp_11p13	0.0409	1
ACTL6B	ZNF362	0.041	1
5q-Del	Del_7q36.1	0.041	1
RB1	14q-Del	0.0412	1
Del_5q11.2	Del_12p13.1	0.0413	1
Del_9p23	Del_12q24.31	0.0413	1
C17orf95	PIK3CA	0.0414	1
Amp_19p13.12	Del_13q14.2	0.0414	1
Amp_13q34	Del_11p15.5	0.0415	1
FOXA1	PIK3R1	0.0417	1
PAX2	17p-Del	0.0417	1
Amp_15q26.3	Del_17q21.31	0.0417	1
13q-Del	Del_7q36.1	0.0418	1
PTPN22	Del_2q37.3	0.0419	1
MYB	TBX3	0.042	1
PTPN22	Amp_11q13.3	0.042	1
RB1	TAF1L	0.0421	1
16q-Del	Del_2q37.3	0.0422	1
Amp_19q13.42	Del_17q21.31	0.0422	1
14q-Del	8p-Del	0.0423	1
AQP12A	Del_11q25	0.0424	1
ICOSLG	Del_11q25	0.0424	1
Del_5q11.2	Del_6q27	0.0424	1
VCPIP1	20p-Amp	0.0425	1
16p-Amp	Amp_6p23	0.0425	1
13q-Del	Amp_1q21.3	0.0426	1
16p-Del	Del_6q27	0.0427	1
C17orf95	MLL3	0.0428	1
CDC42EP1	MLL3	0.0428	1
KRAS	SMAD2	0.0429	1
RUFY1	SMAD2	0.0429	1
RUFY1	SMAD4	0.0429	1
RUFY1	ZFP36L2	0.0429	1
SMAD4	SP3	0.0429	1
SMAD4	TCP11	0.0429	1
FGFR2	Del_17q21.31	0.0431	1
IRS4	SPEN	0.0433	1
NLGN3	SPEN	0.0433	1
6q-Del	Amp_1p22.3	0.0434	1
9q-Del	Amp_17q23.1	0.0434	1
18p-Del	Amp_20q13.2	0.0436	1
8p-Del	9q-Del	0.0437	1
MED23	Del_3p21.31	0.0438	1
CDC42EP1	Amp_19q12	0.0439	1
CDC42EP1	Del_21q11.2	0.0439	1
9q-Del	Del_16q24.3	0.0439	1
Amp_13q34	Del_13q14.2	0.0439	1
NF1	Del_10q26.3	0.044	1
PTEN	18q-Del	0.044	1
EYS	18q-Del	0.0441	1
FGFR2	Del_18q23	0.0442	1
8p-Amp	13q-Del	0.0442	1
5q-Del	Amp_19q12	0.0442	1
5q-Del	Del_21q11.2	0.0442	1
ICOSLG	11q-Del	0.0447	1
20p-Amp	Amp_19q12	0.0447	1
Amp_11q14.1	Del_2q37.3	0.0447	1
Amp_11p13	Del_4q35.1	0.0448	1
MUC6	5q-Del	0.0449	1
8p-Del	Amp_15q26.3	0.0449	1
Del_2q37.3	Del_12q23.1	0.0449	1
Del_2q37.3	Del_12q24.31	0.0449	1
NLGN3	ZNF362	0.045	1
8q-Amp	15q-Del	0.045	1
Amp_6p23	Del_1p36.13	0.045	1
EYS	MYH9	0.0452	1
RB1	Del_5q11.2	0.0452	1
8q-Amp	Del_11q23.3	0.0452	1
13q-Del	Amp_3p25.1	0.0452	1
Amp_17q12	Del_3p21.31	0.0454	1
AQP12A	Del_9p21.3	0.0456	1
ARID1A	CASZ1	0.0456	1
RUFY1	Del_3p21.31	0.0456	1
18q-Del	Amp_1q21.3	0.0456	1
Amp_17q12	Del_19p13.3	0.0456	1
TBX3	Amp_1q44	0.0458	1
15q-Del	Amp_1q44	0.0459	1
Del_7q36.1	Del_17q21.31	0.0459	1
C17orf95	IL1RAP	0.046	1
ZFP36L1	22q-Del	0.046	1
1p-Del	6q-Del	0.046	1
Amp_3p25.1	Amp_11q14.1	0.046	1
Amp_10p15.1	Del_3p21.31	0.046	1
EYS	NCOR1	0.0461	1
5q-Del	8p-Del	0.0461	1
GATA3	9q-Del	0.0462	1
TP53	Amp_15q26.3	0.0462	1
17q-Amp	Del_13q14.2	0.0462	1
MAP3K1	NBPF9	0.0463	1
MYH9	16q-Del	0.0463	1
Amp_19p13.12	Del_9q34.2	0.0463	1
ACTL6B	Del_17p12	0.0465	1
FOXA1	Amp_1q44	0.0465	1
GPS2	Del_17p12	0.0465	1
8p-Amp	11q-Del	0.0465	1
4p-Del	Amp_19p13.12	0.0465	1
MLL3	Del_21q11.2	0.0466	1
11p-Del	Amp_10p15.1	0.0469	1
Amp_20q13.2	Del_3p21.31	0.0469	1
MUC6	Del_22q13.32	0.0472	1
18q-Del	Amp_1p22.3	0.0472	1
SMAD4	Del_9p23	0.0473	1
1q-Amp	18q-Del	0.0473	1
EYS	Del_20p13	0.0474	1
ACTL6B	Del_3p21.31	0.0475	1
Amp_19q12	Del_2q37.3	0.0478	1
16p-Del	6q-Del	0.0479	1
6q-Del	Del_15q13.1	0.048	1
GPS2	PTEN	0.0481	1
VCPIP1	17q-Amp	0.0481	1
VCPIP1	Amp_4q13.3	0.0481	1
9q-Del	Amp_20q13.2	0.0481	1
Del_6p25.3	Del_7p22.3	0.0481	1
NF1	SPEN	0.0482	1
16p-Del	Del_12p13.1	0.0483	1
17q-Amp	Amp_6p23	0.0486	1
SMAD4	Amp_14q21.1	0.0487	1
CASZ1	TBX3	0.0488	1
FRMPD2	NF1	0.0488	1
IRS4	MAP2K4	0.0488	1
MAP2K4	NLGN3	0.0488	1
18q-Del	Amp_14q21.1	0.0488	1
KRAS	TPP2	0.0489	1
RUFY1	TPP2	0.0489	1
MYB	PAX2	0.049	1
NCOR1	16p-Del	0.049	1
16p-Amp	Amp_20q13.2	0.049	1
16p-Del	Amp_19q13.42	0.049	1
FBXW7	5p-Amp	0.0492	1
CBFB	MYH9	0.0493	1
EYS	Amp_4q13.3	0.0493	1
TPP2	Amp_11q14.1	0.0493	1
NBPF9	22q-Del	0.0494	1
TFE3	Amp_8p11.23	0.0494	1
ZFP36L2	Amp_8p11.23	0.0494	1
Amp_1p22.3	Del_18q23	0.0495	1
Amp_8p11.21	Del_6q27	0.0496	1
SMAD2	TFE3	0.0499	1
Amp_4q13.3	Del_4p16.3	0.0501	1
GATA3	VCPIP1	0.0503	1
SF3B1	Del_11q23.3	0.0503	1
11p-Del	Amp_8p11.23	0.0503	1
SMAD4	Del_17q21.31	0.0504	1
VCPIP1	Amp_10q22.3	0.0504	1
11p-Del	Amp_20q13.2	0.0504	1
MLL3	Amp_4q13.3	0.0505	1
Amp_12q15	Del_9q21.11	0.0505	1
Amp_19q12	Del_21q11.2	0.0506	1
8p-Amp	Del_19p13.3	0.0507	1
Amp_12q15	Del_11p15.5	0.0507	1
ACTL6B	NBPF9	0.051	1
C17orf95	GPS2	0.051	1
C17orf95	PTPN22	0.051	1
NBPF9	1q-Del	0.051	1
ARID1A	1q-Amp	0.0511	1
PTEN	Del_10q26.3	0.0511	1
Del_11p15.5	Del_16q24.3	0.0511	1
6q-Del	Amp_6p23	0.0514	1
PAX2	9p-Del	0.0516	1
ERBB2	RB1	0.0517	1
8q-Amp	Amp_1q21.3	0.0517	1
18p-Del	Del_6p25.3	0.0517	1
9q-Del	Amp_6p23	0.0517	1
GATA3	KDM6A	0.0519	1
HRNR	7p-Amp	0.0519	1
4q-Del	Del_6q15	0.0519	1
HRNR	NF1	0.0524	1
20p-Amp	Del_11p15.5	0.0525	1
5p-Amp	Amp_3q26.32	0.0527	1
Amp_3q26.32	Amp_19q13.42	0.0527	1
RUNX1	SPEN	0.0528	1
TP53	Amp_4q13.3	0.0528	1
9q-Del	Amp_8p11.21	0.0528	1
NCDN	RBMX	0.053	1
8p-Amp	6q-Del	0.0533	1
Del_7p22.3	Del_19q13.32	0.0533	1
MUC6	Amp_15q26.3	0.0534	1
Amp_3p25.1	Amp_15q26.3	0.0534	1
FBXW7	Del_10q26.3	0.0536	1
USP36	Amp_1q21.3	0.0536	1
MUC6	Del_6q27	0.0538	1
7p-Amp	8q-Amp	0.054	1
13q-Del	Del_12q24.31	0.054	1
18q-Del	Amp_17q12	0.054	1
8p-Del	Del_6p25.3	0.054	1
Del_9p21.3	Del_12q24.31	0.054	1
FGFR2	Del_2q37.3	0.0542	1
Amp_11p13	Del_6q15	0.0543	1
Del_18q23	Del_21q11.2	0.0544	1
Amp_15q26.3	Del_4p16.3	0.0545	1
EYS	MLL3	0.0546	1
6q-Del	Del_1p22.1	0.0546	1
RAB42	Amp_10p15.1	0.0547	1
7p-Amp	Amp_1q21.3	0.0547	1
Amp_1q21.3	Del_1p22.1	0.0547	1
GATA3	Amp_14q21.1	0.0549	1
ICOSLG	IL1RAP	0.0549	1
IL1RAP	KRAS	0.0549	1
IL1RAP	RUFY1	0.0549	1
SP3	TBL1XR1	0.0549	1
TCP11	VCPIP1	0.0549	1
KCNN3	Amp_19p13.12	0.055	1
9q-Del	Amp_8q24.21	0.0551	1
17q-Del	6q-Del	0.0552	1
AQP12A	Del_11q23.3	0.0554	1
ICOSLG	Del_11q23.3	0.0554	1
11q-Del	Amp_11p13	0.0554	1
EYS	Amp_10p15.1	0.0556	1
RB1	Del_15q13.1	0.0557	1
Amp_17q12	Del_7p22.3	0.0557	1
SMAD2	17p-Del	0.0558	1
RB1	Del_1p36.13	0.0559	1
MUC6	NF1	0.056	1
NF1	PIK3R1	0.056	1
18p-Del	Amp_3p25.1	0.0562	1
APC	17p-Del	0.0563	1
MYH9	17p-Del	0.0563	1
RUFY1	9q-Del	0.0564	1
4q-Del	Del_16q24.3	0.0564	1
CDH1	MED23	0.0565	1
NBPF9	Del_2q37.3	0.0565	1
PTEN	11p-Del	0.0565	1
8q-Amp	Amp_12p13.33	0.0566	1
NCDN	Amp_3q26.32	0.0568	1
SMAD2	TPP2	0.0569	1
Amp_1q44	Amp_11q13.3	0.0569	1
Amp_13q34	Del_9q34.2	0.0569	1
MED23	ZBTB7C	0.057	1
MED23	ZNF362	0.057	1
MUC6	NCDN	0.057	1
EYS	Del_21q11.2	0.0571	1
9q-Del	Amp_19p13.12	0.0572	1
Amp_12q15	Del_19p13.3	0.0572	1
Amp_1q44	Del_18q23	0.0573	1
Amp_11q13.3	Del_2q37.3	0.0577	1
Amp_8p11.23	Del_2q37.3	0.0578	1
Del_5q11.2	Del_21q11.2	0.0579	1
Del_11q25	Del_21q11.2	0.0585	1
PTPN22	17q-Amp	0.0586	1
RBMX	Del_11p15.5	0.0587	1
7p-Amp	Amp_15q26.3	0.0587	1
11q-Del	Del_2q37.3	0.0587	1
5p-Amp	Del_19p13.3	0.0588	1
Amp_6q21	Del_19p13.3	0.0588	1
ARID1A	Amp_11q14.1	0.0589	1
KCNN3	Amp_3q26.32	0.0589	1
20q-Amp	Del_10q23.31	0.0589	1
FBXW7	Amp_10p15.1	0.059	1
18q-Del	Del_21q11.2	0.059	1
CASZ1	SPEN	0.0591	1
ARID1A	Amp_17q12	0.0592	1
Amp_12p13.33	Del_9q21.11	0.0592	1
ARID1A	FBXW7	0.0593	1
ARID1A	ZMYM3	0.0593	1
GPS2	17p-Del	0.0595	1
17p-Del	1q-Del	0.0595	1
17q-Del	Amp_10q22.3	0.0597	1
Amp_10q22.3	Amp_19q12	0.0597	1
KCNN3	Del_7p22.3	0.0599	1
RBMX	Amp_19q12	0.0599	1
16q-Del	Del_9q34.2	0.0603	1
FGFR2	16p-Del	0.0605	1
16p-Amp	Amp_4q13.3	0.0607	1
C17orf95	MYB	0.0609	1
C17orf95	TGS1	0.0609	1
CDC42EP1	TGS1	0.0609	1
CDKN1B	RUFY1	0.0609	1
CDKN1B	TCP11	0.0609	1
PTPN22	RUFY1	0.0609	1
PTPN22	SP3	0.0609	1
PTPN22	TCP11	0.0609	1
Amp_10q22.3	Del_5q21.3	0.0609	1
Amp_12q15	Amp_14q21.1	0.0609	1
FBXW7	NCDN	0.061	1
KDM6A	ZNF362	0.061	1
NBPF9	Del_22q13.32	0.061	1
PAX2	ZMYM3	0.061	1
ZMYM3	ZNF362	0.061	1
Amp_8p11.23	Del_14q24.1	0.0611	1
ICOSLG	MLL3	0.0613	1
MLL3	RUFY1	0.0613	1
MLL3	TCP11	0.0613	1
PTPN22	Amp_10q22.3	0.0613	1
11q-Del	Amp_12q15	0.0613	1
GATA3	MLL3	0.0614	1
GATA3	Amp_12q15	0.0614	1
Amp_3p25.1	Del_13q14.2	0.0615	1
Amp_11p13	Del_6p25.3	0.0617	1
PTEN	Del_9p21.3	0.0618	1
Amp_11q13.3	Del_10q26.3	0.0618	1
Amp_14q21.1	Del_9p21.3	0.0618	1
RBMX	Del_19p13.3	0.0619	1
FOXA1	17q-Amp	0.0621	1
Amp_8p11.23	Del_22q13.32	0.0621	1
MYB	Amp_1q21.3	0.0623	1
9p-Del	Amp_3p25.1	0.0624	1
MUC6	9q-Del	0.0625	1
5p-Amp	Del_4p16.3	0.0625	1
5p-Amp	Del_5q11.2	0.0625	1
11p-Del	18q-Del	0.0625	1
17q-Del	Amp_15q26.3	0.0625	1
18q-Del	Del_9q34.2	0.0625	1
CASZ1	HRNR	0.0627	1
FRMPD2	HRNR	0.0627	1
TBX3	Amp_19q13.42	0.0627	1
FBXW7	Amp_3q26.32	0.0628	1
SP3	14q-Del	0.0629	1
8p-Amp	Amp_19q12	0.063	1
Amp_10q22.3	Del_17q21.31	0.0631	1
NCDN	Amp_11q14.1	0.0632	1
18p-Del	Amp_8q24.21	0.0633	1
PTPN22	18q-Del	0.0634	1
18q-Del	1q-Del	0.0634	1
FBXW7	NF1	0.0635	1
KDM6A	NF1	0.0635	1
NF1	ZMYM3	0.0635	1
TBX3	ZMYM3	0.0635	1
7q-Amp	8p-Amp	0.0635	1
FBXW7	Amp_15q26.3	0.0638	1
KCNN3	TFE3	0.0638	1
SMAD2	VCPIP1	0.0638	1
SMAD4	VCPIP1	0.0638	1
VCPIP1	ZFP36L2	0.0638	1
18q-Del	Del_5q11.2	0.0638	1
8p-Del	Amp_6p23	0.0638	1
TP53	13q-Del	0.0639	1
7p-Amp	Del_9q34.2	0.0639	1
8p-Amp	Del_1p36.13	0.064	1
Amp_6q21	Amp_14q21.1	0.0642	1
Amp_14q21.1	Amp_19q13.42	0.0642	1
ARID1A	Amp_8p11.21	0.0643	1
NCDN	16p-Amp	0.0643	1
Amp_11p13	Del_11q13.1	0.0644	1
18q-Del	Amp_12p13.33	0.0645	1
6q-Del	Amp_8p11.21	0.0645	1
Del_1p36.13	Del_12q24.31	0.0648	1
APC	ZNF362	0.0649	1
CDH1	IL1RAP	0.0649	1
MYH9	NCDN	0.0649	1
Amp_17q12	Del_13q14.2	0.0649	1
IRS4	Amp_6p23	0.0652	1
PTPN22	18p-Del	0.0652	1
SP3	Amp_17q12	0.0652	1
MUC6	Del_15q13.1	0.0653	1
PIK3R1	Del_15q13.1	0.0653	1
9p-Del	Amp_12q15	0.0655	1
C17orf95	FRMPD2	0.0658	1
C17orf95	RBMX	0.0658	1
6q-Del	Amp_8q24.21	0.0659	1
MAP3K1	TCP11	0.0662	1
NLGN3	Del_3p21.31	0.0662	1
RUFY1	4q-Del	0.0662	1
GATA3	SPEN	0.0663	1
Amp_3p25.1	Amp_11q13.3	0.0663	1
Del_12q23.1	Del_22q13.32	0.0663	1
EYS	Del_5q11.2	0.0664	1
NCDN	Del_4q35.1	0.0665	1
PAX2	Del_4q35.1	0.0665	1
FGFR2	NCOR1	0.0666	1
IRS4	NCOR1	0.0666	1
NCOR1	NLGN3	0.0666	1
8p-Del	Del_7q36.1	0.0666	1
APC	ARID1A	0.0667	1
16p-Del	Amp_19p13.12	0.0667	1
FGFR2	KRAS	0.0668	1
FGFR2	RUFY1	0.0668	1
GPRIN2	KRAS	0.0668	1
NLGN3	RUFY1	0.0668	1
NLGN3	TCP11	0.0668	1
16q-Del	Del_12q24.31	0.0668	1
ACTL6B	4p-Del	0.0669	1
1q-Del	4p-Del	0.0669	1
RUNX1	Amp_1q44	0.067	1
17p-Del	Amp_6q21	0.067	1
16p-Del	Amp_10p15.1	0.0671	1
TPP2	Amp_13q34	0.0673	1
USP36	Amp_13q34	0.0673	1
CBFB	RB1	0.0674	1
SMAD4	Amp_15q26.3	0.0675	1
MUC6	SPEN	0.0677	1
17p-Del	Amp_20q13.2	0.0677	1
GATA3	Amp_15q26.3	0.0678	1
Amp_3q26.32	Amp_17q23.1	0.0678	1
Amp_11q13.3	Del_7q36.1	0.0678	1
Amp_8p11.23	Amp_19p13.12	0.0679	1
Amp_3q26.32	Amp_11q13.3	0.068	1
KCNN3	20q-Amp	0.0681	1
Amp_8p11.23	Del_10q26.3	0.0681	1
Amp_6p23	Amp_17q12	0.0682	1
TBL1XR1	Del_16q24.3	0.0684	1
Amp_3q26.32	Del_12q24.31	0.0684	1
CBFB	Amp_1p22.3	0.0686	1
14q-Del	Del_12p13.1	0.0686	1
Amp_19q12	Del_12p13.1	0.0686	1
Del_12p13.1	Del_21q11.2	0.0686	1
ARID1A	Amp_1q44	0.0687	1
PTPN22	Del_10q26.3	0.0687	1
RBMX	Del_12p13.1	0.0689	1
TAF1L	ZBTB7C	0.0689	1
Amp_1q21.3	Del_7q36.1	0.0689	1
15q-Del	Del_18q23	0.0694	1
9q-Del	Del_18q23	0.0694	1
Amp_8p11.21	Del_10q23.31	0.0695	1
IL1RAP	16p-Amp	0.0697	1
SP3	Del_12p13.1	0.0697	1
FGFR2	Amp_4q13.3	0.0698	1
16q-Del	Del_7p22.3	0.0698	1
MED23	Del_7q36.1	0.0699	1
MLL3	PIK3R1	0.0699	1
PIK3R1	Amp_12q15	0.0699	1
15q-Del	Amp_19q13.42	0.0699	1
Amp_19q13.42	Del_20p13	0.0699	1
17q-Amp	Del_6q27	0.07	1
18p-Del	Del_5q21.3	0.07	1
1p-Del	Del_8p23.2	0.0701	1
C17orf95	20p-Amp	0.0702	1
18p-Del	Del_19q13.32	0.0703	1
Del_12q24.31	Del_19p13.3	0.0703	1
11p-Del	Del_19q13.32	0.0706	1
C17orf95	MUC6	0.0707	1
C17orf95	PIK3R1	0.0707	1
CDKN1B	SMAD4	0.0707	1
MUC6	NBPF9	0.0707	1
22q-Del	Amp_8p11.21	0.0708	1
5q-Del	Del_11q13.1	0.0708	1
TBL1XR1	22q-Del	0.0709	1
11p-Del	Del_20p13	0.0709	1
16q-Del	Amp_8p11.23	0.0709	1
22q-Del	Del_12q23.1	0.0709	1
8p-Del	Amp_4q13.3	0.071	1
Amp_11q14.1	Del_16q24.3	0.071	1
SMAD2	Del_3p21.31	0.0712	1
TFE3	Del_3p21.31	0.0712	1
1p-Del	Amp_8q24.21	0.0712	1
APC	TBX3	0.0713	1
CTCF	TBX3	0.0713	1
1p-Del	Del_11p15.5	0.0714	1
FGFR2	1q-Amp	0.0715	1
HRNR	MUC6	0.0718	1
HRNR	PIK3R1	0.0718	1
ARID1A	Del_8p23.2	0.0719	1
TPP2	5p-Amp	0.0719	1
ZFP36L1	5p-Amp	0.0719	1
1q-Amp	7q-Amp	0.0719	1
Del_7p22.3	Del_12q23.1	0.072	1
PAX2	Del_11p15.5	0.0722	1
NCOR1	Del_17p12	0.0723	1
Amp_3q26.32	Amp_17q12	0.0724	1
Amp_10p15.1	Del_7p22.3	0.0725	1
FOXA1	MLL3	0.0726	1
IL1RAP	TPP2	0.0726	1
TPP2	VCPIP1	0.0726	1
Amp_3q26.32	Del_9p23	0.0726	1
RUFY1	TGS1	0.0727	1
SP3	TGS1	0.0727	1
TCP11	TGS1	0.0727	1
Amp_19p13.12	Del_21q11.2	0.0728	1
KCNN3	Del_4q35.1	0.0729	1
AQP12A	Del_6p25.3	0.0731	1
SF3B1	Amp_1q44	0.0732	1
USP36	Del_17q21.31	0.0732	1
Amp_19p13.12	Del_4p16.3	0.0732	1
Del_5q11.2	Del_11q23.3	0.0732	1
Amp_6q21	Amp_11q14.1	0.0734	1
EYS	Amp_11q14.1	0.0735	1
Amp_8q24.21	Del_10q23.31	0.0735	1
EYS	Del_6p25.3	0.0736	1
MAP2K4	SPEN	0.0736	1
20q-Amp	Del_1p36.13	0.0738	1
13q-Del	Amp_10p15.1	0.0738	1
Amp_14q21.1	Del_1p36.13	0.0738	1
Amp_17q23.1	Del_21q11.2	0.0738	1
Del_16q24.3	Del_20p13	0.074	1
RB1	Amp_14q21.1	0.0744	1
PAX2	Del_19p13.3	0.0745	1
ARID1A	11q-Del	0.0746	1
Amp_17q23.1	Amp_19p13.12	0.0746	1
PTEN	Del_18q23	0.0748	1
MYH9	Amp_1p22.3	0.0749	1
Amp_13q34	Amp_19q13.42	0.0749	1
MUC6	Amp_12p13.33	0.075	1
Amp_17q12	Del_19q13.32	0.0752	1
Amp_12q15	Del_4q35.1	0.0754	1
C17orf95	FBXW7	0.0756	1
C17orf95	KDM6A	0.0756	1
C17orf95	ZMYM3	0.0756	1
SMAD2	15q-Del	0.0756	1
GPS2	7p-Amp	0.0757	1
NF1	16p-Del	0.0758	1
MAP2K4	MED23	0.0759	1
8p-Del	Amp_19q12	0.0759	1
22q-Del	Del_5q21.3	0.0764	1
Del_12p13.1	Del_12q23.1	0.0764	1
Del_12p13.1	Del_12q24.31	0.0764	1
FBXW7	SPEN	0.0766	1
SPEN	ZMYM3	0.0766	1
Amp_8p11.23	Del_10q23.31	0.0766	1
16p-Del	Amp_3p25.1	0.0768	1
GPRIN2	Del_17p12	0.0772	1
17q-Del	Amp_13q34	0.0772	1
TAF1L	17p-Del	0.0773	1
TP53	5p-Amp	0.0773	1
Amp_11q13.3	Del_22q13.32	0.0773	1
FGFR2	SMAD2	0.0775	1
FGFR2	SMAD4	0.0775	1
GPRIN2	SMAD2	0.0775	1
IRS4	SMAD2	0.0775	1
NLGN3	SMAD2	0.0775	1
NLGN3	SMAD4	0.0775	1
NLGN3	TFE3	0.0775	1
TGS1	Amp_8p11.21	0.0775	1
Del_6q15	Del_10q26.3	0.0776	1
MAP3K1	MUC6	0.0777	1
ACTL6B	Amp_3q26.32	0.0778	1
16q-Del	Del_18q23	0.0778	1
13q-Del	Amp_12q15	0.0779	1
20q-Amp	Del_17p12	0.078	1
7q-Amp	Amp_10p15.1	0.0782	1
AQP12A	CASZ1	0.0785	1
AQP12A	FRMPD2	0.0785	1
CASZ1	KRAS	0.0785	1
CASZ1	RUFY1	0.0785	1
CASZ1	SP3	0.0785	1
FRMPD2	KRAS	0.0785	1
FRMPD2	RUFY1	0.0785	1
KRAS	RBMX	0.0785	1
RBMX	RUFY1	0.0785	1
RUFY1	Del_9q34.2	0.0785	1
NBPF9	Amp_8p11.23	0.0787	1
8q-Amp	Del_5q21.3	0.0787	1
Amp_3p25.1	Del_11q25	0.0787	1
TBX3	Del_16q24.3	0.0791	1
Amp_1q21.3	Amp_13q34	0.0791	1
Amp_6p23	Del_9q21.11	0.0791	1
15q-Del	Amp_12q15	0.0792	1
Amp_12q15	Del_20p13	0.0792	1
8p-Amp	Amp_11q13.3	0.0793	1
TAF1L	TBX3	0.0795	1
15q-Del	Amp_17q23.1	0.0795	1
Del_7q36.1	Del_22q13.32	0.0795	1
FGFR2	Amp_19p13.12	0.0796	1
20q-Amp	11p-Del	0.0797	1
TAF1L	Del_10q26.3	0.0801	1
Amp_12p13.33	Del_9p21.3	0.0802	1
8q-Amp	Del_17p12	0.0803	1
4p-Del	Amp_4q13.3	0.0803	1
GPS2	TPP2	0.0804	1
PAX2	Del_9p23	0.0804	1
PTPN22	TPP2	0.0804	1
C17orf95	MYH9	0.0805	1
C17orf95	SF3B1	0.0805	1
C17orf95	Del_10q26.3	0.0805	1
Amp_11p13	Amp_20q13.2	0.0806	1
16p-Amp	Amp_12p13.33	0.0807	1
Amp_1q21.3	Del_18q23	0.0809	1
ARID1A	Del_11q23.3	0.0811	1
GATA3	Amp_20q13.2	0.0812	1
HRNR	ZMYM3	0.0812	1
IL1RAP	VCPIP1	0.0814	1
IL1RAP	Del_11p15.5	0.0814	1
KCNN3	Del_11p15.5	0.0814	1
TFE3	Del_6q27	0.0817	1
RBMX	16p-Del	0.0818	1
MLL3	SMAD2	0.0819	1
MLL3	SMAD4	0.0819	1
MLL3	TFE3	0.0819	1
NCOR1	17p-Del	0.082	1
7p-Amp	16p-Del	0.0821	1
Amp_13q34	Del_9q21.11	0.0821	1
Amp_20q13.2	Del_4p16.3	0.0824	1
TGS1	16q-Del	0.0825	1
MAP2K4	Amp_8p11.23	0.0826	1
TP53	Del_12p13.1	0.0826	1
9q-Del	Del_19q13.32	0.0826	1
Amp_10p15.1	Del_13q14.2	0.0826	1
Amp_19q12	Del_4q35.1	0.0826	1
MAP2K4	8p-Amp	0.0827	1
Amp_8p11.23	Del_9q21.11	0.0829	1
MED23	Del_12p13.1	0.083	1
MUC6	Del_12p13.1	0.083	1
FBXW7	MLL3	0.0831	1
KDM6A	MLL3	0.0831	1
18p-Del	Del_8p23.2	0.0831	1
Amp_10q22.3	Del_6p25.3	0.0832	1
PAX2	Del_17p12	0.0833	1
ZNF362	Del_17p12	0.0833	1
Amp_14q21.1	Del_12p13.1	0.0833	1
Del_12p13.1	Del_16q24.3	0.0833	1
PTPN22	Del_4p16.3	0.0836	1
1q-Del	Del_4p16.3	0.0836	1
CDH1	Del_12q24.31	0.0837	1
Amp_11p13	Del_6q27	0.0839	1
7p-Amp	Del_19p13.3	0.084	1
SMAD4	17q-Del	0.0841	1
SMAD4	Del_21q11.2	0.0841	1
TFE3	17q-Del	0.0841	1
ZBTB7C	Del_17q21.31	0.0841	1
AQP12A	MUC6	0.0843	1
AQP12A	PIK3R1	0.0843	1
ICOSLG	PIK3R1	0.0843	1
KRAS	PIK3R1	0.0843	1
MUC6	SP3	0.0843	1
PIK3R1	RUFY1	0.0843	1
TFE3	TGS1	0.0843	1
EYS	ZBTB7C	0.0845	1
Amp_1q44	Del_13q14.2	0.0848	1
9q-Del	Del_21q11.2	0.0849	1
Del_20p13	Del_21q11.2	0.0849	1
Amp_12p13.33	Del_6p25.3	0.085	1
Amp_6q21	Amp_12q15	0.0851	1
AQP12A	22q-Del	0.0852	1
KCNN3	8p-Del	0.0852	1
SP3	22q-Del	0.0852	1
Del_6q15	Del_10q23.31	0.0852	1
CDC42EP1	TAF1L	0.0854	1
TGS1	Amp_10q22.3	0.0854	1
16p-Amp	Amp_11p13	0.0854	1
Amp_19p13.12	Del_18q23	0.0855	1
8q-Amp	Amp_3p25.1	0.0856	1
8q-Amp	Del_7p22.3	0.0856	1
Amp_15q26.3	Amp_17q23.1	0.0857	1
SF3B1	SPEN	0.0859	1
15q-Del	Amp_20q13.2	0.0859	1
Del_6p25.3	Del_12q23.1	0.0859	1
ZMYM3	17q-Del	0.086	1
NCOR1	NF1	0.0863	1
NCOR1	TBX3	0.0863	1
RAB42	TP53	0.0865	1
20q-Amp	Del_2q37.3	0.0866	1
Amp_17q23.1	Del_6p25.3	0.0866	1
EYS	FOXA1	0.087	1
4p-Del	Del_11q13.1	0.087	1
1p-Del	Del_6q27	0.0872	1
16p-Del	Del_19q13.32	0.0875	1
17q-Del	Amp_3p25.1	0.0875	1
Amp_15q26.3	Del_13q14.2	0.0878	1
VCPIP1	Amp_20q13.2	0.088	1
FGFR2	TPP2	0.0881	1
FGFR2	ZFP36L1	0.0881	1
GPRIN2	TPP2	0.0881	1
NLGN3	USP36	0.0881	1
Amp_3p25.1	Amp_13q34	0.0881	1
Amp_11q13.3	Amp_12p13.33	0.0881	1
22q-Del	Amp_20q13.2	0.0882	1
CBFB	NCDN	0.0884	1
Amp_1q44	Del_1p36.13	0.0884	1
SMAD4	Del_6q15	0.0886	1
GATA3	11q-Del	0.0887	1
FGFR2	17p-Del	0.0889	1
GPRIN2	17p-Del	0.0889	1
Amp_12q15	Del_17q21.31	0.0889	1
ARID1A	Amp_10q22.3	0.089	1
FBXW7	Amp_12p13.33	0.089	1
ZMYM3	16q-Del	0.089	1
KCNN3	Amp_19q13.42	0.0891	1
20p-Amp	Amp_14q21.1	0.0891	1
16p-Del	Amp_6p23	0.0893	1
Amp_15q26.3	Del_12q24.31	0.0894	1
11p-Del	Del_7q36.1	0.0895	1
Amp_12q15	Del_9q34.2	0.0895	1
CASZ1	NCOR1	0.0899	1
Amp_14q21.1	Del_19q13.32	0.0899	1
CDKN1B	TBL1XR1	0.09	1
CDKN1B	VCPIP1	0.09	1
KCNN3	1q-Del	0.09	1
FBXW7	KRAS	0.0901	1
FBXW7	RUFY1	0.0901	1
KDM6A	RUFY1	0.0901	1
KDM6A	SP3	0.0901	1
KDM6A	TCP11	0.0901	1
KRAS	ZMYM3	0.0901	1
RUFY1	ZMYM3	0.0901	1
1q-Amp	Amp_17q23.1	0.0903	1
Amp_1q44	Del_7q36.1	0.0905	1
5p-Amp	Amp_19q12	0.0906	1
17q-Del	Amp_6q21	0.0906	1
Amp_19q13.42	Del_21q11.2	0.0906	1
FOXA1	PIK3CA	0.0908	1
TBL1XR1	Del_22q13.32	0.0908	1
APC	HRNR	0.091	1
CASZ1	SMAD4	0.091	1
FRMPD2	TFE3	0.091	1
FRMPD2	ZFP36L2	0.091	1
RBMX	SMAD2	0.091	1
ACTL6B	Del_12q23.1	0.0911	1
15q-Del	18p-Del	0.0911	1
1q-Del	Del_12q23.1	0.0911	1
PTEN	SPEN	0.0912	1
4p-Del	Amp_11q14.1	0.0913	1
Amp_6q21	Del_10q23.31	0.0914	1
Amp_19q13.42	Del_10q23.31	0.0914	1
Amp_11q13.3	Amp_19p13.12	0.0915	1
ACTL6B	16p-Amp	0.0916	1
FGFR2	13q-Del	0.0917	1
MLL3	Del_8p23.2	0.0917	1
PIK3R1	Del_17p12	0.0918	1
FRMPD2	PIK3CA	0.0919	1
Amp_11q13.3	Del_19q13.32	0.092	1
Amp_11q14.1	Del_12q23.1	0.092	1
KDM6A	MAP3K1	0.0921	1
FOXA1	NCDN	0.0923	1
Amp_12p13.33	Del_7p22.3	0.0925	1
TP53	Amp_11p13	0.0927	1
SMAD4	13q-Del	0.0929	1
Amp_6q21	Del_11q25	0.0929	1
Amp_19q13.42	Del_11q25	0.0929	1
NBPF9	Del_5q11.2	0.093	1
20p-Amp	Del_10q26.3	0.093	1
17p-Del	Amp_11q14.1	0.0931	1
Amp_4q13.3	Amp_17q23.1	0.0931	1
15q-Del	Amp_8p11.21	0.0932	1
MUC6	16p-Del	0.0933	1
PIK3R1	16p-Del	0.0933	1
Del_7q36.1	Del_18q23	0.0935	1
Amp_8p11.21	Del_7p22.3	0.0938	1
Amp_10q22.3	Del_10q26.3	0.0938	1
Amp_19q12	Del_11q13.1	0.0938	1
17q-Amp	Amp_15q26.3	0.094	1
7q-Amp	16q-Del	0.0941	1
16p-Del	Amp_11q14.1	0.0941	1
CTCF	16p-Amp	0.0942	1
SF3B1	16p-Amp	0.0942	1
11p-Del	Amp_8p11.21	0.0942	1
Amp_11p13	Del_15q13.1	0.0943	1
CBFB	FOXA1	0.0944	1
GPRIN2	Amp_10p15.1	0.0945	1
CDC42EP1	CDH1	0.0946	1
20q-Amp	15q-Del	0.0946	1
CDC42EP1	8q-Amp	0.0947	1
Amp_3q26.32	Amp_15q26.3	0.0949	1
C17orf95	ERBB2	0.095	1
C17orf95	RB1	0.095	1
CDC42EP1	ERBB2	0.095	1
CDC42EP1	RB1	0.095	1
22q-Del	Amp_11q13.3	0.095	1
ICOSLG	Del_5q21.3	0.0953	1
Del_2q37.3	Del_7q36.1	0.0953	1
7p-Amp	Amp_19q12	0.0954	1
Amp_17q12	Del_4p16.3	0.0955	1
Amp_12q15	Del_6q27	0.0956	1
ACTL6B	Del_4q35.1	0.0957	1
1q-Del	Del_15q13.1	0.0957	1
Amp_20q13.2	Del_22q13.32	0.0957	1
APC	ICOSLG	0.0959	1
APC	KRAS	0.0959	1
APC	RUFY1	0.0959	1
APC	SP3	0.0959	1
MYH9	SP3	0.0959	1
MYH9	TCP11	0.0959	1
SF3B1	SP3	0.0959	1
Amp_11q13.3	Del_19p13.3	0.0959	1
PIK3R1	Del_17q21.31	0.096	1
14q-Del	Amp_3q26.32	0.096	1
Amp_3q26.32	Del_21q11.2	0.096	1
11p-Del	Del_21q11.2	0.0962	1
Amp_19q12	Del_9q34.2	0.0962	1
FOXA1	Amp_11q13.3	0.0963	1
7q-Amp	Del_16q24.3	0.0964	1
FOXA1	Del_16q24.3	0.0965	1
ZFP36L1	15q-Del	0.0965	1
ERBB2	NF1	0.0966	1
ERBB2	TBX3	0.0966	1
RB1	5q-Del	0.097	1
APC	MLL3	0.0973	1
Amp_11q13.3	Del_3p21.31	0.0973	1
Amp_12p13.33	Del_1p36.13	0.0973	1
Amp_20q13.2	Del_6q27	0.0973	1
ARID1A	Del_6q27	0.0976	1
MED23	TFE3	0.0977	1
MUC6	SMAD4	0.0977	1
PIK3R1	SMAD2	0.0977	1
C17orf95	20q-Amp	0.0978	1
PIK3R1	TP53	0.0979	1
PTPN22	Amp_17q23.1	0.0979	1
Amp_11q13.3	Del_6p25.3	0.098	1
FGFR2	IL1RAP	0.0986	1
FGFR2	KCNN3	0.0986	1
GPRIN2	VCPIP1	0.0986	1
IL1RAP	IRS4	0.0986	1
NLGN3	VCPIP1	0.0986	1
AQP12A	8p-Del	0.0988	1
CDC42EP1	Amp_1q44	0.0988	1
ICOSLG	8p-Del	0.0988	1
Del_11q13.1	Del_17q21.31	0.0988	1
IRS4	Amp_3q26.32	0.0991	1
MED23	Del_16q24.3	0.0991	1
RUFY1	Del_11q13.1	0.0991	1
ERBB2	6q-Del	0.0992	1
20p-Amp	Del_10q23.31	0.0993	1
CDC42EP1	16p-Amp	0.0994	1
Amp_11q14.1	Del_4p16.3	0.0994	1
Amp_4q13.3	Del_11q23.3	0.0995	1
Amp_8p11.21	Del_10q26.3	0.0995	1
ACTL6B	1q-Del	0.0996	1
CDKN1B	PTPN22	0.0996	1
Amp_19q13.42	Del_7p22.3	0.0998	1
FBXW7	PTEN	0.1	1
PTEN	ZMYM3	0.1	1
SMAD4	Amp_17q12	0.1	1
USP36	11q-Del	0.1	1
ACTL6B	22q-Del	0.101	1
HRNR	TAF1L	0.101	1
TAF1L	Del_20p13	0.101	1
TGS1	18q-Del	0.101	1
7p-Amp	Amp_12p13.33	0.101	1
Amp_10q22.3	Del_19p13.3	0.101	1
Del_6q15	Del_15q13.1	0.101	1
KRAS	TAF1L	0.102	1
VCPIP1	Del_18q23	0.102	1
ZFP36L1	8q-Amp	0.102	1
20p-Amp	Del_7p22.3	0.102	1
Amp_8p11.21	Amp_12p13.33	0.102	1
Amp_10q22.3	Amp_15q26.3	0.102	1
Amp_12p13.33	Del_22q13.32	0.102	1
Amp_17q12	Del_18q23	0.102	1
Del_5q21.3	Del_11q23.3	0.102	1
Del_7p22.3	Del_11q13.1	0.102	1
Del_16q24.3	Del_19p13.3	0.102	1
EYS	Del_11q23.3	0.103	1
FRMPD2	TPP2	0.103	1
NBPF9	Amp_8q24.21	0.103	1
RBMX	TPP2	0.103	1
TP53	VCPIP1	0.103	1
11p-Del	Amp_12p13.33	0.103	1
16p-Del	Amp_12q15	0.103	1
Amp_8p11.21	Amp_13q34	0.103	1
ARID1A	NCDN	0.104	1
ARID1A	PAX2	0.104	1
CDH1	TAF1L	0.104	1
FBXW7	TFE3	0.104	1
HRNR	Del_1p22.1	0.104	1
ICOSLG	Amp_8p11.21	0.104	1
KDM6A	SMAD2	0.104	1
MLL3	TPP2	0.104	1
MLL3	USP36	0.104	1
PIK3CA	ZBTB7C	0.104	1
SMAD2	ZMYM3	0.104	1
TCP11	Amp_8p11.21	0.104	1
TFE3	ZMYM3	0.104	1
20p-Amp	Amp_11q14.1	0.104	1
20q-Amp	Del_7p22.3	0.104	1
Amp_6p23	Del_9p23	0.104	1
Amp_12q15	Del_5q11.2	0.104	1
ARID1A	MLL3	0.105	1
CDC42EP1	EYS	0.105	1
FBXW7	16p-Del	0.105	1
FBXW7	Del_6p25.3	0.105	1
RBMX	Del_5q21.3	0.105	1
TCP11	6q-Del	0.105	1
16q-Del	Del_9p23	0.105	1
17q-Del	Del_7q36.1	0.105	1
8p-Del	Del_1p22.1	0.105	1
Del_7q36.1	Del_21q11.2	0.105	1
ACTL6B	Del_11p15.5	0.106	1
MED23	22q-Del	0.106	1
MUC6	22q-Del	0.106	1
VCPIP1	Amp_1q21.3	0.106	1
ZBTB7C	11q-Del	0.106	1
Amp_8p11.23	Del_5q11.2	0.106	1
Amp_8p11.21	Del_15q13.1	0.106	1
Amp_13q34	Del_8p23.2	0.106	1
ACTL6B	Amp_19q13.42	0.107	1
IL1RAP	Amp_15q26.3	0.107	1
MYB	TBL1XR1	0.107	1
PAX2	Del_3p21.31	0.107	1
PAX2	Del_9p21.3	0.107	1
PTPN22	Amp_19q13.42	0.107	1
TGS1	VCPIP1	0.107	1
USP36	14q-Del	0.107	1
USP36	17q-Del	0.107	1
USP36	Del_21q11.2	0.107	1
ZNF362	Del_3p21.31	0.107	1
13q-Del	Amp_10q22.3	0.107	1
18q-Del	Del_8p23.2	0.107	1
6q-Del	Del_4p16.3	0.107	1
APC	MAP3K1	0.108	1
ARID1A	Del_10q26.3	0.108	1
CTCF	MAP3K1	0.108	1
GPRIN2	Del_12q23.1	0.108	1
IRS4	Del_12q24.31	0.108	1
MAP3K1	MYH9	0.108	1
NF1	ZBTB7C	0.108	1
PAX2	TBX3	0.108	1
5p-Amp	Del_14q24.1	0.108	1
Amp_4q13.3	Del_9p23	0.108	1
ACTL6B	IRS4	0.109	1
ARID1A	Del_21q11.2	0.109	1
CBFB	CDC42EP1	0.109	1
CBFB	NBPF9	0.109	1
CDH1	FGFR2	0.109	1
CDKN1B	FGFR2	0.109	1
CDKN1B	IRS4	0.109	1
CDKN1B	NLGN3	0.109	1
GPRIN2	GPS2	0.109	1
IRS4	PTPN22	0.109	1
MYB	1q-Amp	0.109	1
NLGN3	PTPN22	0.109	1
RB1	4p-Del	0.109	1
14q-Del	16q-Del	0.109	1
18q-Del	Amp_12q15	0.109	1
9q-Del	Amp_15q26.3	0.109	1
Amp_6p23	Del_20p13	0.109	1
Amp_17q12	Amp_19q12	0.109	1
Amp_19q12	Del_8p23.2	0.109	1
Amp_20q13.2	Del_11q13.1	0.109	1
Del_10q23.31	Del_17q21.31	0.109	1
CDH1	NCOR1	0.11	1
TAF1L	TP53	0.11	1
TGS1	Amp_8p11.23	0.11	1
ZFP36L1	Del_9q21.11	0.11	1
15q-Del	Del_12p13.1	0.11	1
9q-Del	Del_12p13.1	0.11	1
Amp_6p23	Del_3p21.31	0.11	1
Amp_10q22.3	Del_13q14.2	0.11	1
ACTL6B	16q-Del	0.111	1
ACTL6B	Amp_11p13	0.111	1
APC	SMAD4	0.111	1
AQP12A	Del_8p23.2	0.111	1
GATA3	RUFY1	0.111	1
GPS2	16q-Del	0.111	1
MLL3	1q-Amp	0.111	1
MYH9	SMAD4	0.111	1
PIK3R1	TPP2	0.111	1
RUFY1	4p-Del	0.111	1
SF3B1	SMAD4	0.111	1
SMAD4	Amp_1q44	0.111	1
20p-Amp	Del_6q15	0.111	1
16q-Del	1q-Del	0.111	1
Amp_13q34	Amp_15q26.3	0.111	1
MAP3K1	USP36	0.112	1
PTEN	SF3B1	0.112	1
RB1	Del_10q26.3	0.112	1
Amp_1q44	Del_11q23.3	0.112	1
Amp_11p13	Del_3p21.31	0.112	1
AQP12A	9p-Del	0.113	1
ERBB2	KRAS	0.113	1
ERBB2	RUFY1	0.113	1
EYS	Del_5q21.3	0.113	1
KRAS	RB1	0.113	1
RB1	RUFY1	0.113	1
SP3	Del_10q26.3	0.113	1
13q-Del	Amp_15q26.3	0.113	1
Amp_11p13	Del_8p23.2	0.113	1
ACTL6B	5q-Del	0.114	1
5p-Amp	Del_5q21.3	0.114	1
8p-Amp	1p-Del	0.114	1
18p-Del	Amp_14q21.1	0.114	1
EYS	NF1	0.115	1
EYS	TBX3	0.115	1
FBXW7	NCOR1	0.115	1
KDM6A	NCOR1	0.115	1
NCOR1	ZMYM3	0.115	1
RB1	Del_10q23.31	0.115	1
RUFY1	Del_10q23.31	0.115	1
8p-Amp	18p-Del	0.115	1
Amp_8p11.21	Del_1p36.13	0.115	1
CASZ1	VCPIP1	0.116	1
ERBB2	SPEN	0.116	1
FBXW7	Amp_1q44	0.116	1
FRMPD2	IL1RAP	0.116	1
GPRIN2	16p-Amp	0.116	1
IL1RAP	RBMX	0.116	1
KDM6A	Amp_1q44	0.116	1
NLGN3	16p-Amp	0.116	1
ZFP36L1	Del_6q27	0.116	1
17q-Amp	9q-Del	0.116	1
8p-Amp	Amp_12q15	0.116	1
8q-Amp	Del_2q37.3	0.116	1
13q-Del	Amp_11p13	0.116	1
15q-Del	Amp_4q13.3	0.116	1
16p-Del	Amp_17q23.1	0.116	1
1p-Del	Del_4q35.1	0.116	1
4p-Del	Del_6q15	0.116	1
Amp_1p22.3	Amp_11p13	0.116	1
Amp_1q44	Del_15q13.1	0.116	1
Amp_3q26.32	Amp_10q22.3	0.116	1
Amp_14q21.1	Del_4q35.1	0.116	1
MYB	Amp_10p15.1	0.117	1
SF3B1	16p-Del	0.117	1
SMAD4	Amp_8q24.21	0.117	1
1q-Amp	Del_12q23.1	0.117	1
16q-Del	Del_12q23.1	0.117	1
18q-Del	Amp_8q24.21	0.117	1
Amp_1p22.3	Del_10q23.31	0.117	1
Amp_4q13.3	Del_5q11.2	0.117	1
Amp_17q23.1	Del_10q23.31	0.117	1
Del_7q36.1	Del_9p21.3	0.117	1
CDKN1B	TGS1	0.118	1
FBXW7	TPP2	0.118	1
GPS2	MYB	0.118	1
KDM6A	USP36	0.118	1
KDM6A	ZFP36L1	0.118	1
SMAD2	TAF1L	0.118	1
TAF1L	TFE3	0.118	1
TAF1L	ZFP36L2	0.118	1
TPP2	ZMYM3	0.118	1
USP36	ZMYM3	0.118	1
Amp_10p15.1	Del_12p13.1	0.118	1
CDKN1B	Del_16q24.3	0.119	1
HRNR	NCOR1	0.119	1
IL1RAP	Del_20p13	0.119	1
KCNN3	15q-Del	0.119	1
NCDN	SPEN	0.119	1
RAB42	7q-Amp	0.119	1
SMAD4	1q-Amp	0.119	1
SPEN	ZBTB7C	0.119	1
ZNF362	7q-Amp	0.119	1
1p-Del	Del_12q23.1	0.119	1
1q-Del	Del_16q24.3	0.119	1
Amp_17q23.1	Del_9q34.2	0.119	1
FBXW7	1q-Amp	0.12	1
KDM6A	1q-Amp	0.12	1
MYH9	Amp_17q12	0.12	1
RB1	Amp_8q24.21	0.12	1
9q-Del	Amp_8p11.23	0.12	1
Amp_6p23	Amp_8p11.23	0.12	1
Amp_11q14.1	Amp_17q23.1	0.12	1
Amp_15q26.3	Amp_19p13.12	0.12	1
Amp_19p13.12	Del_7p22.3	0.12	1
FGFR2	Del_4q35.1	0.121	1
ICOSLG	Amp_1p22.3	0.121	1
PAX2	Del_8p23.2	0.121	1
Del_12q24.31	Del_22q13.32	0.121	1
TP53	17p-Del	0.122	1
20q-Amp	Amp_8p11.21	0.122	1
15q-Del	Amp_14q21.1	0.122	1
Amp_11q14.1	Del_7q36.1	0.122	1
Amp_11q14.1	Del_22q13.32	0.122	1
Amp_19p13.12	Amp_20q13.2	0.122	1
Amp_19p13.12	Del_2q37.3	0.122	1
C17orf95	Del_9p23	0.123	1
EYS	5q-Del	0.123	1
KCNN3	Amp_8q24.21	0.123	1
VCPIP1	Amp_8q24.21	0.123	1
8p-Amp	Del_8p23.2	0.123	1
11q-Del	Amp_19q12	0.123	1
18q-Del	Amp_3p25.1	0.123	1
Amp_1q21.3	Amp_6q21	0.123	1
Amp_8p11.21	Amp_17q23.1	0.123	1
Amp_11p13	Del_12p13.1	0.123	1
CBFB	TBX3	0.124	1
EYS	KRAS	0.124	1
EYS	RUFY1	0.124	1
EYS	SP3	0.124	1
PIK3R1	TBL1XR1	0.124	1
TAF1L	4q-Del	0.124	1
TP53	8p-Amp	0.124	1
8p-Amp	Del_21q11.2	0.124	1
16q-Del	Amp_11q13.3	0.124	1
Amp_3q26.32	Del_10q23.31	0.124	1
Amp_11q13.3	Del_7p22.3	0.124	1
Amp_11q14.1	Del_6q15	0.124	1
ARID1A	FOXA1	0.125	1
TGS1	Del_12q24.31	0.125	1
ZBTB7C	Del_6q15	0.125	1
ZNF362	Del_6q15	0.125	1
1p-Del	Del_10q26.3	0.125	1
6q-Del	Del_17q21.31	0.125	1
Amp_6p23	Del_22q13.32	0.125	1
Amp_6q21	Amp_17q12	0.125	1
Amp_8p11.21	Del_19q13.32	0.125	1
Del_11q23.3	Del_21q11.2	0.125	1
APC	TPP2	0.126	1
APC	USP36	0.126	1
CTCF	TPP2	0.126	1
FRMPD2	8p-Amp	0.126	1
FRMPD2	Amp_8q24.21	0.126	1
HRNR	Amp_4q13.3	0.126	1
HRNR	Del_16q24.3	0.126	1
MYH9	USP36	0.126	1
NF1	Del_17q21.31	0.126	1
SMAD4	Amp_17q23.1	0.126	1
15q-Del	Amp_10q22.3	0.126	1
17q-Del	Amp_17q23.1	0.126	1
18q-Del	Amp_17q23.1	0.126	1
9q-Del	Amp_10q22.3	0.126	1
Amp_6p23	Del_6q15	0.126	1
Amp_10q22.3	Del_20p13	0.126	1
Amp_17q12	Del_12q23.1	0.126	1
Amp_19q13.42	Del_11q13.1	0.126	1
GPRIN2	5p-Amp	0.127	1
IRS4	Amp_6q21	0.127	1
USP36	Del_11q25	0.127	1
8p-Amp	11p-Del	0.127	1
4q-Del	Amp_19q12	0.127	1
Amp_6q21	Amp_17q23.1	0.127	1
ACTL6B	Amp_8p11.21	0.128	1
ACTL6B	Amp_15q26.3	0.128	1
ACTL6B	Del_22q13.32	0.128	1
ARID1A	C17orf95	0.128	1
ARID1A	CDC42EP1	0.128	1
C17orf95	Del_17q21.31	0.128	1
CASZ1	GPS2	0.128	1
CASZ1	PTPN22	0.128	1
CDKN1B	FRMPD2	0.128	1
CDKN1B	RBMX	0.128	1
ERBB2	PIK3CA	0.128	1
MAP2K4	NCOR1	0.128	1
MLL3	TBL1XR1	0.128	1
MLL3	VCPIP1	0.128	1
MLL3	16p-Amp	0.128	1
NF1	7p-Amp	0.128	1
RBMX	1q-Del	0.128	1
16p-Amp	Amp_13q34	0.128	1
18p-Del	Del_7p22.3	0.128	1
1q-Del	Amp_15q26.3	0.128	1
8p-Del	Del_5q21.3	0.128	1
MYH9	NCOR1	0.129	1
NCOR1	SF3B1	0.129	1
NLGN3	TGS1	0.129	1
PIK3R1	8p-Del	0.129	1
RBMX	4p-Del	0.129	1
ZFP36L2	22q-Del	0.129	1
16p-Amp	Amp_11q14.1	0.129	1
11p-Del	Amp_13q34	0.129	1
Amp_19p13.12	Del_22q13.32	0.129	1
FGFR2	Amp_11p13	0.13	1
ICOSLG	Del_5q11.2	0.13	1
PTEN	11q-Del	0.13	1
RUFY1	Del_4p16.3	0.13	1
7p-Amp	Del_4q35.1	0.13	1
8q-Amp	Del_20p13	0.13	1
EYS	Amp_17q12	0.131	1
KCNN3	14q-Del	0.131	1
PIK3R1	Del_7p22.3	0.131	1
RB1	SMAD2	0.131	1
RB1	ZFP36L2	0.131	1
RB1	Del_20p13	0.131	1
VCPIP1	Amp_19q12	0.131	1
20p-Amp	Del_11q23.3	0.131	1
14q-Del	Amp_1q21.3	0.131	1
1p-Del	Del_10q23.31	0.131	1
FBXW7	KCNN3	0.132	1
ICOSLG	Amp_8p11.23	0.132	1
IL1RAP	ZMYM3	0.132	1
KDM6A	VCPIP1	0.132	1
20q-Amp	Amp_19q12	0.132	1
8p-Amp	Del_6q27	0.132	1
22q-Del	Amp_11q14.1	0.132	1
Amp_4q13.3	Amp_11q14.1	0.132	1
Amp_8p11.23	Del_12q23.1	0.132	1
C17orf95	TBX3	0.133	1
C17orf95	16q-Del	0.133	1
CDC42EP1	TBX3	0.133	1
NBPF9	NF1	0.133	1
NBPF9	16q-Del	0.133	1
TAF1L	TPP2	0.133	1
TAF1L	USP36	0.133	1
APC	17q-Amp	0.134	1
FOXA1	NF1	0.134	1
MLL3	Del_12q24.31	0.134	1
SF3B1	17q-Amp	0.134	1
17q-Amp	Amp_12q15	0.134	1
8p-Amp	Amp_12p13.33	0.134	1
17p-Del	Amp_11p13	0.134	1
Amp_11p13	Del_17p12	0.134	1
FOXA1	ICOSLG	0.135	1
FOXA1	SP3	0.135	1
KCNN3	Amp_12p13.33	0.135	1
TPP2	Del_2q37.3	0.135	1
VCPIP1	Amp_12p13.33	0.135	1
ZFP36L1	Del_2q37.3	0.135	1
7q-Amp	Del_11q13.1	0.135	1
8q-Amp	16p-Del	0.135	1
Amp_13q34	Del_17p12	0.135	1
AQP12A	Amp_11q14.1	0.136	1
ERBB2	Del_1p22.1	0.136	1
IL1RAP	17p-Del	0.136	1
22q-Del	Amp_19q13.42	0.136	1
Amp_1q44	Del_12q24.31	0.136	1
Amp_3p25.1	Del_6q27	0.136	1
Amp_11q14.1	Del_17q21.31	0.136	1
ACTL6B	MUC6	0.137	1
CDC42EP1	RUNX1	0.137	1
CTCF	Del_2q37.3	0.137	1
MUC6	PTPN22	0.137	1
MUC6	1q-Del	0.137	1
16p-Amp	Amp_11q13.3	0.137	1
17q-Amp	Amp_1q44	0.137	1
8p-Amp	Del_14q24.1	0.137	1
ICOSLG	16p-Amp	0.138	1
KRAS	16p-Amp	0.138	1
MED23	Del_22q13.32	0.138	1
PAX2	PTEN	0.138	1
PTEN	ZBTB7C	0.138	1
RB1	Del_3p21.31	0.138	1
RB1	Del_9p21.3	0.138	1
SMAD4	6q-Del	0.138	1
Amp_1q21.3	Del_5q11.2	0.138	1
Del_10q26.3	Del_21q11.2	0.138	1
AQP12A	Del_16q24.3	0.139	1
PTEN	16p-Del	0.139	1
Amp_20q13.2	Del_9q34.2	0.139	1
CASZ1	FGFR2	0.14	1
FGFR2	FRMPD2	0.14	1
FGFR2	RBMX	0.14	1
FRMPD2	IRS4	0.14	1
FRMPD2	NLGN3	0.14	1
17q-Amp	Amp_19q12	0.14	1
APC	VCPIP1	0.141	1
CDKN1B	1q-Amp	0.141	1
MUC6	Del_3p21.31	0.141	1
MYH9	TBL1XR1	0.141	1
PTPN22	1q-Amp	0.141	1
SMAD2	18q-Del	0.141	1
TAF1L	Del_19p13.3	0.141	1
Del_12q23.1	Del_19p13.3	0.141	1
ACTL6B	Del_20p13	0.142	1
PTPN22	Del_20p13	0.142	1
15q-Del	1q-Del	0.142	1
1q-Del	Del_20p13	0.142	1
Amp_8p11.23	Del_17p12	0.142	1
Amp_13q34	Del_18q23	0.142	1
AQP12A	Del_15q13.1	0.143	1
EYS	SMAD4	0.143	1
MYB	16p-Amp	0.143	1
MYH9	Del_17q21.31	0.143	1
RUFY1	Del_4q35.1	0.143	1
SMAD2	18p-Del	0.143	1
SMAD4	8p-Amp	0.143	1
SMAD4	18p-Del	0.143	1
20p-Amp	Amp_4q13.3	0.143	1
7q-Amp	Del_9p21.3	0.143	1
11q-Del	Amp_13q34	0.143	1
EYS	HRNR	0.144	1
RUFY1	17p-Del	0.144	1
TBL1XR1	Del_12p13.1	0.144	1
VCPIP1	Del_12p13.1	0.144	1
20p-Amp	Del_6p25.3	0.144	1
7p-Amp	Amp_3p25.1	0.144	1
16p-Del	Amp_6q21	0.144	1
Del_2q37.3	Del_7p22.3	0.144	1
MLL3	RB1	0.145	1
17p-Del	Amp_8p11.23	0.145	1
Del_10q23.31	Del_21q11.2	0.145	1
ACTL6B	ZMYM3	0.146	1
CDKN1B	KDM6A	0.146	1
GATA3	SMAD4	0.146	1
KCNN3	Del_1p36.13	0.146	1
17q-Amp	1p-Del	0.146	1
20q-Amp	Amp_10q22.3	0.146	1
7q-Amp	Del_19p13.3	0.146	1
8p-Amp	Amp_11q14.1	0.146	1
11q-Del	Amp_1q21.3	0.146	1
CDC42EP1	SPEN	0.147	1
FBXW7	Amp_3p25.1	0.147	1
FBXW7	Del_7p22.3	0.147	1
20q-Amp	Del_6q27	0.147	1
16q-Del	Del_11p15.5	0.147	1
Amp_4q13.3	Amp_12p13.33	0.147	1
Amp_11q14.1	Del_6q27	0.147	1
ERBB2	TPP2	0.148	1
MLL3	16q-Del	0.148	1
RB1	TPP2	0.148	1
SMAD2	9p-Del	0.148	1
TAF1L	Amp_17q12	0.148	1
14q-Del	Amp_8p11.21	0.148	1
IL1RAP	TAF1L	0.149	1
NCDN	NCOR1	0.149	1
PIK3R1	18p-Del	0.149	1
TAF1L	VCPIP1	0.149	1
1q-Del	Del_17p12	0.149	1
CBFB	SMAD4	0.15	1
CBFB	TFE3	0.15	1
FGFR2	PIK3R1	0.15	1
FGFR2	Amp_15q26.3	0.15	1
GPRIN2	MUC6	0.15	1
IL1RAP	8q-Amp	0.15	1
IRS4	PIK3R1	0.15	1
IRS4	Amp_15q26.3	0.15	1
MED23	NLGN3	0.15	1
Amp_1q21.3	Amp_11p13	0.15	1
Amp_15q26.3	Amp_20q13.2	0.15	1
Amp_17q12	Del_11p15.5	0.15	1
C17orf95	HRNR	0.151	1
CASZ1	TGS1	0.151	1
EYS	Del_11q25	0.151	1
HRNR	NBPF9	0.151	1
HRNR	Del_20p13	0.151	1
KCNN3	Del_6p25.3	0.151	1
5p-Amp	Del_8p23.2	0.151	1
17q-Del	1p-Del	0.151	1
1p-Del	Del_21q11.2	0.151	1
Amp_1q21.3	Del_1p36.13	0.151	1
Amp_14q21.1	Del_21q11.2	0.151	1
ARID1A	SP3	0.152	1
ARID1A	TCP11	0.152	1
ARID1A	8q-Amp	0.152	1
PIK3R1	4p-Del	0.152	1
PIK3R1	Del_1p36.13	0.152	1
SMAD4	Amp_20q13.2	0.152	1
ZFP36L1	16q-Del	0.152	1
8q-Amp	Del_11q13.1	0.152	1
11q-Del	Amp_19p13.12	0.152	1
Amp_1q44	Amp_6q21	0.152	1
Amp_8p11.21	Del_22q13.32	0.152	1
ACTL6B	MLL3	0.153	1
ARID1A	20q-Amp	0.153	1
FGFR2	Del_9p23	0.153	1
1q-Del	Amp_12q15	0.153	1
4q-Del	Amp_4q13.3	0.153	1
AQP12A	Del_11p15.5	0.154	1
ICOSLG	Del_11p15.5	0.154	1
MYH9	Amp_1q21.3	0.154	1
16q-Del	Del_20p13	0.154	1
4q-Del	Amp_17q23.1	0.154	1
Amp_8q24.21	Del_9q21.11	0.154	1
APC	GPS2	0.155	1
APC	PTPN22	0.155	1
CDKN1B	CTCF	0.155	1
CTCF	PTPN22	0.155	1
CTCF	1q-Del	0.155	1
GATA3	20q-Amp	0.155	1
MYH9	PTPN22	0.155	1
PTPN22	SF3B1	0.155	1
TAF1L	Amp_10q22.3	0.155	1
ZFP36L2	Del_22q13.32	0.155	1
16q-Del	Del_9p21.3	0.155	1
Amp_11q14.1	Del_5q21.3	0.155	1
Del_15q13.1	Del_16q24.3	0.155	1
CDC42EP1	1q-Amp	0.156	1
FOXA1	SMAD4	0.156	1
MAP2K4	Del_11q23.3	0.156	1
MUC6	9p-Del	0.156	1
MUC6	Del_10q26.3	0.156	1
NBPF9	1q-Amp	0.156	1
NCOR1	PTEN	0.156	1
RB1	16p-Del	0.156	1
SMAD4	Amp_10p15.1	0.156	1
20p-Amp	Amp_10q22.3	0.156	1
Amp_1q44	Del_7p22.3	0.156	1
Amp_1q44	Del_10q26.3	0.156	1
Amp_6q21	Del_2q37.3	0.156	1
Amp_19q13.42	Del_2q37.3	0.156	1
KRAS	NF1	0.157	1
NF1	SP3	0.157	1
NF1	TCP11	0.157	1
PTPN22	TP53	0.157	1
RBMX	Del_4p16.3	0.157	1
RUFY1	TBX3	0.157	1
17q-Del	1q-Del	0.157	1
22q-Del	Amp_15q26.3	0.157	1
Amp_19p13.12	Del_9p21.3	0.157	1
RUFY1	Del_19p13.3	0.158	1
SP3	Del_19p13.3	0.158	1
TP53	9p-Del	0.158	1
USP36	Del_5q21.3	0.158	1
8q-Amp	11p-Del	0.158	1
Amp_1p22.3	Amp_8p11.23	0.158	1
Amp_3q26.32	Amp_8p11.21	0.158	1
Amp_3q26.32	Del_22q13.32	0.158	1
Amp_10q22.3	Amp_12p13.33	0.158	1
Amp_12p13.33	Amp_14q21.1	0.158	1
Amp_14q21.1	Del_17p12	0.158	1
CBFB	8p-Amp	0.159	1
FBXW7	FGFR2	0.159	1
FBXW7	GPRIN2	0.159	1
FGFR2	ZMYM3	0.159	1
IRS4	KDM6A	0.159	1
IRS4	ZMYM3	0.159	1
SMAD2	Amp_1p22.3	0.159	1
USP36	Del_11q23.3	0.159	1
15q-Del	Amp_6q21	0.159	1
9q-Del	Amp_6q21	0.159	1
Amp_3p25.1	Del_6q15	0.159	1
Amp_19q12	Del_6p25.3	0.159	1
Amp_20q13.2	Del_17q21.31	0.159	1
Del_6p25.3	Del_21q11.2	0.159	1
MAP2K4	Del_16q24.3	0.16	1
SPEN	18p-Del	0.16	1
17q-Amp	6q-Del	0.16	1
5p-Amp	Amp_14q21.1	0.16	1
Amp_20q13.2	Del_6p25.3	0.16	1
CASZ1	CDH1	0.161	1
CDH1	FRMPD2	0.161	1
CTCF	Amp_6p23	0.161	1
KCNN3	Del_9q34.2	0.161	1
PAX2	Amp_17q23.1	0.161	1
1q-Amp	Amp_11q13.3	0.161	1
16p-Del	Amp_1p22.3	0.161	1
Amp_1p22.3	Del_16q24.3	0.161	1
Amp_6p23	Del_17p12	0.161	1
Amp_17q12	Amp_19p13.12	0.161	1
C17orf95	Del_9p21.3	0.162	1
CDH1	NF1	0.162	1
EYS	USP36	0.162	1
MED23	Del_12q24.31	0.162	1
MUC6	TGS1	0.162	1
MYB	PIK3CA	0.162	1
NBPF9	Del_3p21.31	0.162	1
PIK3CA	ZFP36L2	0.162	1
PIK3R1	16q-Del	0.162	1
7q-Amp	Amp_19q12	0.162	1
13q-Del	Amp_12p13.33	0.162	1
Amp_4q13.3	Amp_13q34	0.162	1
Amp_10q22.3	Del_4q35.1	0.162	1
Amp_12p13.33	Del_9p23	0.162	1
C17orf95	Del_17p12	0.163	1
CASZ1	RBMX	0.163	1
FRMPD2	RBMX	0.163	1
HRNR	Del_9p21.3	0.163	1
RB1	Del_4q35.1	0.163	1
RUNX1	TCP11	0.163	1
8p-Amp	Amp_1q44	0.163	1
18q-Del	Amp_3q26.32	0.163	1
Amp_11q14.1	Del_17p12	0.163	1
ACTL6B	MAP3K1	0.164	1
ACTL6B	4q-Del	0.164	1
GPS2	TAF1L	0.164	1
HRNR	Amp_3p25.1	0.164	1
KCNN3	Del_2q37.3	0.164	1
PAX2	22q-Del	0.164	1
PTPN22	4q-Del	0.164	1
USP36	Del_11q13.1	0.164	1
ZNF362	22q-Del	0.164	1
17p-Del	Amp_6p23	0.164	1
1q-Del	4q-Del	0.164	1
Amp_3q26.32	Del_7q36.1	0.164	1
Amp_12q15	Amp_13q34	0.164	1
Amp_13q34	Del_7q36.1	0.164	1
ERBB2	IL1RAP	0.165	1
IL1RAP	RB1	0.165	1
MAP3K1	22q-Del	0.165	1
5p-Amp	4p-Del	0.165	1
Del_1p22.1	Del_17q21.31	0.165	1
CASZ1	Amp_17q12	0.166	1
MAP2K4	Del_11q13.1	0.166	1
17p-Del	Amp_3q26.32	0.166	1
Amp_17q23.1	Del_18q23	0.166	1
Del_1p22.1	Del_6p25.3	0.166	1
Del_7q36.1	Del_11q13.1	0.166	1
FGFR2	9q-Del	0.167	1
KCNN3	Del_6q15	0.167	1
PTEN	Del_4p16.3	0.167	1
RBMX	5p-Amp	0.167	1
RBMX	Amp_6q21	0.167	1
9q-Del	Amp_12q15	0.167	1
Amp_1q44	Amp_6p23	0.167	1
CASZ1	Amp_11q14.1	0.168	1
CDC42EP1	TP53	0.168	1
7q-Amp	Amp_12p13.33	0.168	1
Amp_12q15	Amp_19p13.12	0.168	1
Del_7p22.3	Del_22q13.32	0.168	1
APC	FGFR2	0.169	1
C17orf95	PTEN	0.169	1
CBFB	TPP2	0.169	1
ERBB2	Del_12p13.1	0.169	1
MYH9	NLGN3	0.169	1
NBPF9	Del_1p36.13	0.169	1
RB1	Del_12p13.1	0.169	1
SF3B1	7p-Amp	0.169	1
SMAD4	Del_4p16.3	0.169	1
TFE3	Del_4p16.3	0.169	1
1p-Del	Amp_11p13	0.169	1
9q-Del	Amp_3p25.1	0.169	1
Amp_8p11.23	Del_7p22.3	0.169	1
Amp_11p13	Del_20p13	0.169	1
Del_6q27	Del_19q13.32	0.169	1
AQP12A	Del_9p23	0.17	1
HRNR	Del_7q36.1	0.17	1
KDM6A	18q-Del	0.17	1
ZMYM3	18q-Del	0.17	1
Amp_6q21	Del_11q23.3	0.17	1
Amp_13q34	Del_1p36.13	0.17	1
Del_11q13.1	Del_12q24.31	0.17	1
NCDN	Amp_3p25.1	0.171	1
NCDN	Del_7p22.3	0.171	1
ZMYM3	Del_3p21.31	0.171	1
5q-Del	Amp_11q14.1	0.171	1
ACTL6B	11q-Del	0.172	1
CDH1	TFE3	0.172	1
FOXA1	Amp_8p11.21	0.172	1
GPS2	11q-Del	0.172	1
PTPN22	Del_12p13.1	0.172	1
SMAD2	Amp_11q13.3	0.172	1
11q-Del	1q-Del	0.172	1
Amp_12p13.33	Del_11q25	0.172	1
Amp_13q34	Amp_17q23.1	0.172	1
AQP12A	SPEN	0.173	1
AQP12A	7q-Amp	0.173	1
FRMPD2	TP53	0.173	1
KRAS	SPEN	0.173	1
MYB	ZMYM3	0.173	1
RBMX	TP53	0.173	1
SPEN	TCP11	0.173	1
16p-Amp	Amp_1q21.3	0.173	1
20p-Amp	Del_9q34.2	0.173	1
11q-Del	Amp_19q13.42	0.173	1
18p-Del	Amp_3q26.32	0.173	1
5q-Del	Del_9p23	0.173	1
CASZ1	PIK3R1	0.174	1
CTCF	Del_17p12	0.174	1
FRMPD2	MUC6	0.174	1
GATA3	8p-Del	0.174	1
KDM6A	18p-Del	0.174	1
MED23	RBMX	0.174	1
MUC6	RBMX	0.174	1
NBPF9	16p-Del	0.174	1
NCDN	7p-Amp	0.174	1
PIK3R1	RBMX	0.174	1
PIK3R1	Amp_3q26.32	0.174	1
PTEN	Amp_10q22.3	0.174	1
USP36	Amp_17q23.1	0.174	1
VCPIP1	13q-Del	0.174	1
ZMYM3	8p-Amp	0.174	1
ZMYM3	18p-Del	0.174	1
11p-Del	Amp_1p22.3	0.174	1
18p-Del	6q-Del	0.174	1
4p-Del	Amp_1p22.3	0.174	1
Amp_1p22.3	Del_9q34.2	0.174	1
ARID1A	SMAD2	0.175	1
ARID1A	TFE3	0.175	1
ARID1A	ZFP36L2	0.175	1
EYS	PTEN	0.175	1
PTPN22	Del_3p21.31	0.175	1
PTPN22	Del_9p21.3	0.175	1
TP53	Amp_14q21.1	0.175	1
20q-Amp	Amp_19p13.12	0.175	1
16q-Del	Del_4q35.1	0.175	1
16q-Del	Del_15q13.1	0.175	1
1p-Del	Del_5q11.2	0.175	1
6q-Del	Amp_17q23.1	0.175	1
Amp_6p23	Amp_20q13.2	0.175	1
FOXA1	USP36	0.176	1
MLL3	Del_11p15.5	0.176	1
TBX3	16p-Amp	0.176	1
Amp_1q21.3	Del_12q23.1	0.176	1
Amp_6p23	Del_11q23.3	0.176	1
Amp_19q12	Del_20p13	0.176	1
AQP12A	Del_17q21.31	0.177	1
CDC42EP1	Del_6q27	0.177	1
CDKN1B	Amp_1q21.3	0.177	1
MUC6	Amp_13q34	0.177	1
RBMX	5q-Del	0.177	1
SMAD2	Amp_11q14.1	0.177	1
Amp_6p23	Del_9p21.3	0.177	1
Amp_19p13.12	Del_1p36.13	0.177	1
APC	Del_11q13.1	0.178	1
GATA3	ZMYM3	0.178	1
PAX2	Del_19q13.32	0.178	1
RBMX	Del_15q13.1	0.178	1
ZNF362	Del_19q13.32	0.178	1
7p-Amp	Del_6q15	0.178	1
8q-Amp	Del_15q13.1	0.178	1
16p-Del	Del_1p22.1	0.178	1
Amp_10q22.3	Del_8p23.2	0.178	1
AQP12A	HRNR	0.179	1
FGFR2	TAF1L	0.179	1
FOXA1	Amp_1q21.3	0.179	1
HRNR	KRAS	0.179	1
HRNR	RUFY1	0.179	1
IRS4	Amp_12q15	0.179	1
MLL3	NLGN3	0.179	1
RUFY1	Del_18q23	0.179	1
TCP11	Del_18q23	0.179	1
USP36	22q-Del	0.179	1
ZFP36L1	8p-Amp	0.179	1
5p-Amp	Del_9p21.3	0.179	1
Amp_17q12	Del_6q15	0.179	1
ACTL6B	Del_6p25.3	0.18	1
GPS2	Del_6p25.3	0.18	1
MAP3K1	Del_22q13.32	0.18	1
NCOR1	Amp_1q44	0.18	1
ACTL6B	RB1	0.181	1
ARID1A	Amp_19q13.42	0.181	1
EYS	VCPIP1	0.181	1
NF1	SMAD4	0.181	1
NF1	ZFP36L2	0.181	1
PAX2	8p-Del	0.181	1
RB1	1q-Del	0.181	1
TBX3	TFE3	0.181	1
20p-Amp	Amp_8p11.21	0.181	1
16q-Del	Del_12p13.1	0.181	1
Amp_3p25.1	Del_1p22.1	0.181	1
1q-Del	Del_13q14.2	0.182	1
9p-Del	Amp_17q12	0.182	1
Amp_1q21.3	Del_6q27	0.182	1
APC	TGS1	0.183	1
CDC42EP1	NCOR1	0.183	1
GPRIN2	17q-Del	0.183	1
GPRIN2	Del_16q24.3	0.183	1
HRNR	Amp_12p13.33	0.183	1
MAP2K4	6q-Del	0.183	1
MYH9	TGS1	0.183	1
NCOR1	Amp_17q12	0.183	1
RB1	Del_14q24.1	0.183	1
SF3B1	TGS1	0.183	1
Amp_1q21.3	Amp_11q13.3	0.183	1
Amp_13q34	Del_19p13.3	0.183	1
KDM6A	PIK3CA	0.184	1
KRAS	MAP2K4	0.184	1
MAP2K4	MLL3	0.184	1
MAP2K4	7p-Amp	0.184	1
PIK3CA	ZMYM3	0.184	1
TPP2	1q-Amp	0.184	1
USP36	1q-Amp	0.184	1
ZFP36L1	1q-Amp	0.184	1
ZFP36L1	Amp_1q21.3	0.184	1
8p-Amp	18q-Del	0.184	1
Amp_4q13.3	Del_10q26.3	0.184	1
Amp_6p23	Del_7p22.3	0.184	1
KCNN3	Amp_6p23	0.185	1
MUC6	Del_5q11.2	0.185	1
MYB	Amp_1q44	0.185	1
PIK3R1	Del_4p16.3	0.185	1
RB1	Amp_10q22.3	0.185	1
TBX3	16q-Del	0.185	1
USP36	Del_10q26.3	0.185	1
Amp_10p15.1	Del_19q13.32	0.185	1
CASZ1	FBXW7	0.186	1
CASZ1	KDM6A	0.186	1
CASZ1	ZMYM3	0.186	1
FBXW7	RBMX	0.186	1
FRMPD2	KDM6A	0.186	1
KCNN3	Amp_17q12	0.186	1
KDM6A	1p-Del	0.186	1
RBMX	ZMYM3	0.186	1
TFE3	Del_4q35.1	0.186	1
VCPIP1	Amp_17q12	0.186	1
17q-Amp	Del_11q25	0.186	1
Amp_4q13.3	Amp_11p13	0.186	1
CDC42EP1	Amp_4q13.3	0.187	1
FGFR2	Del_9q21.11	0.187	1
NBPF9	17q-Amp	0.187	1
NBPF9	Amp_4q13.3	0.187	1
NBPF9	Del_6q15	0.187	1
NCDN	Amp_1q21.3	0.187	1
RUNX1	SMAD2	0.187	1
RUNX1	SMAD4	0.187	1
SPEN	Del_12p13.1	0.187	1
Del_6p25.3	Del_19p13.3	0.187	1
ARID1A	Amp_11p13	0.188	1
PAX2	Del_22q13.32	0.188	1
PIK3R1	Amp_19q13.42	0.188	1
RAB42	Amp_8p11.21	0.188	1
MAP2K4	Amp_8p11.21	0.189	1
USP36	Del_10q23.31	0.189	1
14q-Del	Amp_8q24.21	0.189	1
Amp_19q12	Del_14q24.1	0.189	1
7p-Amp	Del_22q13.32	0.19	1
17p-Del	Amp_19q13.42	0.19	1
ACTL6B	11p-Del	0.191	1
EYS	Amp_12p13.33	0.191	1
20p-Amp	Amp_10p15.1	0.191	1
4q-Del	Amp_19p13.12	0.191	1
Amp_10p15.1	Del_6q27	0.191	1
MAP3K1	NLGN3	0.192	1
PAX2	Del_12q23.1	0.192	1
PTPN22	Amp_1q44	0.192	1
ZNF362	Del_12q23.1	0.192	1
22q-Del	Amp_3p25.1	0.192	1
22q-Del	Del_7p22.3	0.192	1
MUC6	Amp_11p13	0.193	1
TAF1L	TGS1	0.193	1
USP36	Del_17p12	0.193	1
ZFP36L1	Del_17p12	0.193	1
20p-Amp	Del_11q25	0.193	1
18p-Del	Amp_8p11.23	0.193	1
Amp_20q13.2	Del_12q23.1	0.193	1
ERBB2	11p-Del	0.194	1
HRNR	Del_10q23.31	0.194	1
NCOR1	Del_2q37.3	0.194	1
RB1	Del_9q34.2	0.194	1
5p-Amp	14q-Del	0.194	1
17q-Del	Amp_19q13.42	0.194	1
18q-Del	Amp_1q44	0.195	1
22q-Del	Del_7q36.1	0.195	1
6q-Del	Del_11p15.5	0.195	1
FOXA1	IL1RAP	0.196	1
FOXA1	TBL1XR1	0.196	1
GATA3	Del_8p23.2	0.196	1
MLL3	Amp_12q15	0.196	1
TBX3	5p-Amp	0.196	1
TGS1	Del_17q21.31	0.196	1
8p-Amp	Amp_6p23	0.196	1
8q-Amp	Del_11p15.5	0.196	1
ARID1A	TPP2	0.197	1
CASZ1	MYH9	0.197	1
CASZ1	SF3B1	0.197	1
CDKN1B	PIK3CA	0.197	1
EYS	20q-Amp	0.197	1
GPS2	PIK3CA	0.197	1
NCDN	Amp_1q44	0.197	1
PIK3CA	PTPN22	0.197	1
PIK3R1	20q-Amp	0.197	1
RAB42	Amp_1q44	0.197	1
TPP2	Amp_1q44	0.197	1
USP36	Amp_1q44	0.197	1
ZBTB7C	Amp_1q44	0.197	1
ZFP36L1	Amp_1q44	0.197	1
ERBB2	FGFR2	0.198	1
ERBB2	IRS4	0.198	1
FGFR2	RB1	0.198	1
ZFP36L1	Amp_1p22.3	0.198	1
CDKN1B	EYS	0.199	1
EYS	GPS2	0.199	1
IL1RAP	Del_11q13.1	0.199	1
KCNN3	20p-Amp	0.199	1
KDM6A	MUC6	0.199	1
MED23	ZMYM3	0.199	1
SMAD2	Del_11p15.5	0.199	1
SPEN	TFE3	0.199	1
SPEN	ZFP36L2	0.199	1
TBL1XR1	Del_11q13.1	0.199	1
TGS1	Del_18q23	0.199	1
7p-Amp	Del_9p23	0.199	1
8p-Amp	Del_16q24.3	0.199	1
Amp_3p25.1	Del_5q21.3	0.199	1
Amp_8p11.21	Amp_17q12	0.199	1
AQP12A	PTEN	0.2	1
C17orf95	Amp_19p13.12	0.2	1
ICOSLG	PTEN	0.2	1
ICOSLG	Amp_1q44	0.2	1
KDM6A	Amp_11q13.3	0.2	1
KRAS	PTEN	0.2	1
20q-Amp	Del_6p25.3	0.2	1
4q-Del	Del_11q13.1	0.2	1
MUC6	16p-Amp	0.201	1
SPEN	Del_12q24.31	0.201	1
USP36	Amp_3q26.32	0.201	1
8q-Amp	Del_16q24.3	0.201	1
1q-Del	Amp_8q24.21	0.201	1
Amp_1p22.3	Del_11q13.1	0.201	1
CBFB	Del_1p22.1	0.202	1
MYH9	Del_16q24.3	0.202	1
TBX3	Amp_11q13.3	0.202	1
ZBTB7C	Amp_11q13.3	0.202	1
Amp_11p13	Del_13q14.2	0.202	1
ARID1A	HRNR	0.203	1
MUC6	Amp_17q12	0.203	1
PAX2	Amp_13q34	0.203	1
USP36	8p-Del	0.203	1
5p-Amp	Del_9q21.11	0.203	1
Amp_6q21	Del_9q21.11	0.203	1
Amp_20q13.2	Del_12p13.1	0.203	1
Del_11q13.1	Del_15q13.1	0.203	1
HRNR	TP53	0.204	1
NF1	TPP2	0.204	1
NF1	USP36	0.204	1
SPEN	TBX3	0.204	1
TBX3	TPP2	0.204	1
7p-Amp	Del_5q11.2	0.204	1
8q-Amp	Del_10q26.3	0.204	1
Amp_1p22.3	Del_6q27	0.204	1
Amp_4q13.3	Amp_10p15.1	0.204	1
Amp_6p23	Amp_19q13.42	0.204	1
HRNR	SMAD2	0.205	1
HRNR	TFE3	0.205	1
KRAS	16p-Del	0.205	1
RUFY1	16p-Del	0.205	1
RUNX1	Amp_1q21.3	0.205	1
SMAD2	Del_19p13.3	0.205	1
17q-Amp	11q-Del	0.205	1
8q-Amp	17q-Del	0.205	1
8q-Amp	Del_12q23.1	0.205	1
8q-Amp	Del_12q24.31	0.205	1
MLL3	MYB	0.206	1
MLL3	7p-Amp	0.206	1
SMAD4	Del_13q14.2	0.206	1
TGS1	Amp_12q15	0.206	1
TPP2	Amp_8q24.21	0.206	1
17q-Amp	Amp_4q13.3	0.206	1
11q-Del	Amp_14q21.1	0.206	1
17p-Del	Amp_3p25.1	0.206	1
17q-Del	Amp_11p13	0.206	1
Amp_11p13	Del_21q11.2	0.206	1
Amp_11q13.3	Del_9q34.2	0.206	1
Amp_11q13.3	Del_20p13	0.206	1
Amp_15q26.3	Del_1p36.13	0.206	1
CBFB	CDKN1B	0.207	1
CBFB	GPS2	0.207	1
8p-Amp	Del_12q24.31	0.207	1
14q-Del	Del_7q36.1	0.207	1
17q-Del	Amp_12q15	0.207	1
Amp_12q15	Del_21q11.2	0.207	1
Amp_12q15	Del_22q13.32	0.207	1
CASZ1	TAF1L	0.208	1
ICOSLG	Amp_8q24.21	0.208	1
MYH9	Del_10q26.3	0.208	1
TCP11	Amp_8q24.21	0.208	1
TPP2	Amp_20q13.2	0.208	1
20q-Amp	Amp_3p25.1	0.208	1
Amp_11q14.1	Del_7p22.3	0.208	1
FGFR2	Del_6p25.3	0.209	1
KCNN3	6q-Del	0.209	1
MUC6	Del_4q35.1	0.209	1
PIK3R1	Del_4q35.1	0.209	1
7q-Amp	Amp_14q21.1	0.209	1
Del_2q37.3	Del_8p23.2	0.209	1
APC	MED23	0.21	1
APC	MUC6	0.21	1
FBXW7	16q-Del	0.21	1
MUC6	SF3B1	0.21	1
NCDN	Amp_6q21	0.21	1
RB1	Amp_17q12	0.21	1
SMAD4	17p-Del	0.21	1
TFE3	17p-Del	0.21	1
ZMYM3	Del_1p22.1	0.21	1
ZNF362	5p-Amp	0.21	1
ZNF362	Amp_19q13.42	0.21	1
Amp_3p25.1	Del_9q21.11	0.21	1
Amp_4q13.3	Del_9p21.3	0.21	1
Amp_19q12	Del_3p21.31	0.21	1
CDKN1B	Del_6q15	0.211	1
FBXW7	KDM6A	0.211	1
HRNR	16q-Del	0.211	1
MAP2K4	SMAD2	0.211	1
MAP2K4	TFE3	0.211	1
MAP2K4	ZFP36L2	0.211	1
RUNX1	TPP2	0.211	1
TGS1	Amp_20q13.2	0.211	1
USP36	Del_5q11.2	0.211	1
5p-Amp	Amp_17q12	0.211	1
5p-Amp	Amp_17q23.1	0.211	1
15q-Del	8p-Del	0.211	1
16q-Del	4q-Del	0.211	1
Amp_17q23.1	Amp_19q13.42	0.211	1
CASZ1	Amp_17q23.1	0.212	1
FRMPD2	Amp_17q23.1	0.212	1
RB1	Del_9p23	0.212	1
1q-Amp	20p-Amp	0.212	1
ARID1A	MAP2K4	0.213	1
ARID1A	20p-Amp	0.213	1
MAP3K1	5p-Amp	0.213	1
NBPF9	7p-Amp	0.213	1
USP36	Amp_8p11.21	0.213	1
USP36	Del_22q13.32	0.213	1
VCPIP1	18q-Del	0.213	1
ZBTB7C	Amp_11p13	0.213	1
ZFP36L1	Amp_8p11.21	0.213	1
14q-Del	Amp_20q13.2	0.213	1
8p-Del	Amp_11p13	0.213	1
Amp_14q21.1	Del_3p21.31	0.213	1
CBFB	NCOR1	0.214	1
ERBB2	TGS1	0.214	1
RB1	Del_7p22.3	0.214	1
7p-Amp	Del_5q21.3	0.214	1
Amp_6q21	Amp_19p13.12	0.214	1
EYS	PIK3CA	0.215	1
HRNR	TBX3	0.215	1
KRAS	NCOR1	0.215	1
NCOR1	RUFY1	0.215	1
7p-Amp	17q-Del	0.215	1
18q-Del	8p-Del	0.215	1
Amp_11p13	Amp_12p13.33	0.215	1
EYS	FGFR2	0.216	1
EYS	IRS4	0.216	1
EYS	NLGN3	0.216	1
FGFR2	Del_3p21.31	0.216	1
FOXA1	GPS2	0.216	1
FOXA1	PTPN22	0.216	1
8p-Amp	Del_17p12	0.216	1
13q-Del	Amp_1q44	0.216	1
Amp_8p11.21	Del_12p13.1	0.216	1
Amp_14q21.1	Amp_15q26.3	0.216	1
Amp_19q13.42	Del_22q13.32	0.216	1
AQP12A	11q-Del	0.217	1
IL1RAP	8p-Amp	0.217	1
KCNN3	18p-Del	0.217	1
RBMX	15q-Del	0.217	1
TBL1XR1	16q-Del	0.217	1
VCPIP1	18p-Del	0.217	1
14q-Del	Amp_19q12	0.217	1
Amp_3q26.32	Amp_4q13.3	0.217	1
Amp_4q13.3	Amp_10q22.3	0.217	1
Amp_8p11.23	Del_19q13.32	0.217	1
Amp_12p13.33	Del_7q36.1	0.217	1
Amp_17q23.1	Del_9q21.11	0.217	1
Del_7q36.1	Del_9q21.11	0.217	1
HRNR	Amp_3q26.32	0.218	1
MED23	Del_17p12	0.218	1
ARID1A	VCPIP1	0.219	1
CDH1	KDM6A	0.219	1
FGFR2	TP53	0.219	1
GPRIN2	TP53	0.219	1
SF3B1	Amp_13q34	0.219	1
SMAD2	Del_9p23	0.219	1
20p-Amp	6q-Del	0.219	1
ICOSLG	Del_3p21.31	0.22	1
MAP3K1	MYB	0.22	1
SP3	17q-Amp	0.22	1
SPEN	Amp_1q44	0.22	1
USP36	Amp_11q14.1	0.22	1
ZFP36L1	20q-Amp	0.22	1
ZFP36L1	Amp_11q14.1	0.22	1
RAB42	Amp_8p11.23	0.221	1
5p-Amp	5q-Del	0.221	1
APC	Amp_10p15.1	0.222	1
CBFB	22q-Del	0.222	1
PIK3R1	TAF1L	0.222	1
TP53	9q-Del	0.222	1
8p-Amp	Amp_14q21.1	0.222	1
18p-Del	Del_21q11.2	0.222	1
Amp_11p13	Del_1p36.13	0.222	1
CBFB	17q-Amp	0.223	1
CBFB	Amp_4q13.3	0.223	1
HRNR	Amp_14q21.1	0.223	1
6q-Del	Amp_11q13.3	0.223	1
Amp_8p11.21	Amp_19p13.12	0.223	1
Amp_15q26.3	Del_20p13	0.223	1
Amp_19p13.12	Del_6p25.3	0.223	1
FBXW7	MYH9	0.224	1
FOXA1	Amp_19q12	0.224	1
HRNR	Del_6q15	0.224	1
IL1RAP	Del_10q26.3	0.224	1
KCNN3	9p-Del	0.224	1
KCNN3	Del_10q26.3	0.224	1
KDM6A	SF3B1	0.224	1
MYH9	ZMYM3	0.224	1
SPEN	TPP2	0.224	1
SPEN	USP36	0.224	1
20p-Amp	11q-Del	0.224	1
4p-Del	Del_16q24.3	0.224	1
FOXA1	Del_1p22.1	0.225	1
MAP2K4	NF1	0.225	1
RUFY1	Amp_10q22.3	0.225	1
7p-Amp	Amp_11q14.1	0.225	1
Amp_10q22.3	Del_2q37.3	0.225	1
Amp_13q34	Del_6p25.3	0.225	1
ACTL6B	Del_5q21.3	0.226	1
NCOR1	16q-Del	0.226	1
NF1	Amp_17q23.1	0.226	1
TAF1L	Amp_14q21.1	0.226	1
Amp_6p23	Del_10q23.31	0.226	1
FBXW7	20q-Amp	0.227	1
FBXW7	Amp_11q14.1	0.227	1
KCNN3	Amp_17q23.1	0.227	1
KCNN3	Del_10q23.31	0.227	1
MAP3K1	Amp_8p11.23	0.227	1
NBPF9	Del_8p23.2	0.227	1
NF1	VCPIP1	0.227	1
SMAD2	Del_17q21.31	0.227	1
TBX3	VCPIP1	0.227	1
VCPIP1	Amp_17q23.1	0.227	1
20q-Amp	14q-Del	0.227	1
Amp_11q14.1	Amp_19q12	0.227	1
FBXW7	Amp_1q21.3	0.228	1
KDM6A	Amp_1q21.3	0.228	1
MAP2K4	Del_12q23.1	0.228	1
MAP2K4	Del_12q24.31	0.228	1
4q-Del	Amp_12q15	0.228	1
Amp_10q22.3	Amp_17q12	0.228	1
Amp_12q15	Del_10q26.3	0.228	1
AQP12A	Del_1p36.13	0.229	1
ERBB2	RBMX	0.229	1
ICOSLG	Del_1p36.13	0.229	1
MUC6	TP53	0.229	1
PTEN	SMAD2	0.229	1
PTEN	ZFP36L2	0.229	1
RB1	RBMX	0.229	1
RUFY1	Del_1p36.13	0.229	1
TGS1	Del_12p13.1	0.229	1
Amp_8q24.21	Del_7q36.1	0.229	1
MLL3	PTEN	0.23	1
SMAD2	Del_18q23	0.23	1
ZFP36L1	Del_15q13.1	0.23	1
16p-Amp	Del_11q23.3	0.23	1
8q-Amp	1p-Del	0.23	1
16q-Del	9q-Del	0.23	1
FOXA1	Amp_12p13.33	0.231	1
HRNR	TPP2	0.231	1
MYH9	Amp_3q26.32	0.231	1
PAX2	Amp_15q26.3	0.231	1
RAB42	Del_13q14.2	0.231	1
SF3B1	Amp_3q26.32	0.231	1
TAF1L	4p-Del	0.231	1
Amp_11p13	Amp_17q12	0.231	1
CASZ1	MLL3	0.232	1
EYS	Amp_19p13.12	0.232	1
FRMPD2	MLL3	0.232	1
ZMYM3	16p-Amp	0.232	1
7p-Amp	4q-Del	0.232	1
22q-Del	Amp_12p13.33	0.232	1
Amp_1q21.3	Amp_10q22.3	0.232	1
Amp_6q21	Del_12p13.1	0.232	1
Amp_10q22.3	Del_9p21.3	0.232	1
SMAD2	Del_16q24.3	0.233	1
SPEN	Amp_11q14.1	0.233	1
8p-Amp	Del_2q37.3	0.233	1
15q-Del	Amp_3q26.32	0.233	1
Amp_11q13.3	Del_10q23.31	0.233	1
EYS	MYB	0.234	1
EYS	TGS1	0.234	1
NF1	Del_11q13.1	0.234	1
RUNX1	TBL1XR1	0.234	1
RUNX1	VCPIP1	0.234	1
TBX3	Del_11q13.1	0.234	1
TPP2	Amp_11q13.3	0.234	1
USP36	Amp_11q13.3	0.234	1
ZNF362	17p-Del	0.234	1
1q-Del	Amp_17q12	0.234	1
9p-Del	Amp_19p13.12	0.234	1
FOXA1	IRS4	0.235	1
ICOSLG	Amp_19p13.12	0.235	1
IL1RAP	Amp_10p15.1	0.235	1
SMAD2	16p-Del	0.235	1
ZFP36L2	16p-Del	0.235	1
8q-Amp	Amp_6q21	0.235	1
14q-Del	Amp_1q44	0.235	1
Amp_8p11.21	Amp_20q13.2	0.235	1
Amp_15q26.3	Del_6q27	0.235	1
C17orf95	Amp_17q23.1	0.236	1
FBXW7	TAF1L	0.236	1
FGFR2	Del_13q14.2	0.236	1
KDM6A	TAF1L	0.236	1
MUC6	Del_19p13.3	0.236	1
PTPN22	Del_8p23.2	0.236	1
16p-Amp	Amp_15q26.3	0.236	1
APC	SF3B1	0.237	1
APC	Amp_11p13	0.237	1
ERBB2	Del_16q24.3	0.237	1
MYH9	SF3B1	0.237	1
SF3B1	Amp_11p13	0.237	1
Amp_14q21.1	Del_11q23.3	0.237	1
Del_9q21.11	Del_19q13.32	0.237	1
GATA3	Del_17q21.31	0.238	1
IL1RAP	Amp_1p22.3	0.238	1
7p-Amp	Amp_11q13.3	0.238	1
7q-Amp	8p-Del	0.238	1
7q-Amp	Amp_8q24.21	0.238	1
Amp_14q21.1	Del_10q26.3	0.238	1
ICOSLG	Del_6q27	0.239	1
NBPF9	Amp_14q21.1	0.239	1
TCP11	Del_6q27	0.239	1
17q-Amp	Amp_19p13.12	0.239	1
20q-Amp	Del_9q34.2	0.239	1
Amp_1q21.3	Del_5q21.3	0.239	1
Amp_3p25.1	Amp_19q13.42	0.239	1
Amp_12q15	Del_15q13.1	0.239	1
ARID1A	CDKN1B	0.24	1
ARID1A	Del_17q21.31	0.24	1
CDC42EP1	22q-Del	0.24	1
FBXW7	Del_4q35.1	0.24	1
SPEN	16p-Amp	0.24	1
Amp_1p22.3	Del_4q35.1	0.24	1
IRS4	Del_6q27	0.241	1
MYH9	PIK3CA	0.241	1
PIK3CA	SF3B1	0.241	1
20p-Amp	18p-Del	0.241	1
Amp_19q12	Del_10q26.3	0.241	1
CBFB	Del_6p25.3	0.242	1
RB1	Del_5q21.3	0.242	1
7q-Amp	Amp_6q21	0.242	1
11p-Del	Amp_6p23	0.242	1
Amp_1q44	Del_10q23.31	0.242	1
ARID1A	8p-Amp	0.243	1
CBFB	TGS1	0.243	1
GATA3	Del_11q23.3	0.243	1
MUC6	Del_20p13	0.243	1
PIK3CA	TPP2	0.243	1
PIK3R1	9q-Del	0.243	1
PIK3R1	Del_20p13	0.243	1
RBMX	Amp_12p13.33	0.243	1
20p-Amp	Del_5q11.2	0.243	1
9q-Del	Del_12q23.1	0.243	1
Del_4p16.3	Del_11q13.1	0.243	1
NCOR1	Del_11q23.3	0.244	1
PAX2	9q-Del	0.244	1
PAX2	Del_20p13	0.244	1
SF3B1	Amp_11q13.3	0.244	1
ZBTB7C	Del_20p13	0.244	1
ZNF362	Del_20p13	0.244	1
16p-Amp	18p-Del	0.244	1
8q-Amp	Del_11q25	0.244	1
FOXA1	Amp_8p11.23	0.245	1
ICOSLG	Del_7p22.3	0.245	1
KDM6A	Amp_15q26.3	0.245	1
MAP2K4	22q-Del	0.245	1
RUFY1	Del_7p22.3	0.245	1
SP3	Amp_3p25.1	0.245	1
SP3	Del_7p22.3	0.245	1
TCP11	Amp_3p25.1	0.245	1
15q-Del	Del_11q13.1	0.245	1
16p-Del	Del_7q36.1	0.245	1
ACTL6B	Del_11q25	0.246	1
ARID1A	Del_18q23	0.246	1
CDKN1B	6q-Del	0.246	1
KRAS	1q-Amp	0.246	1
NCOR1	SMAD4	0.246	1
SP3	1q-Amp	0.246	1
USP36	Del_14q24.1	0.246	1
Del_6q27	Del_12q23.1	0.246	1
NBPF9	Amp_13q34	0.247	1
MAP3K1	8p-Amp	0.248	1
MAP3K1	8q-Amp	0.248	1
RBMX	4q-Del	0.248	1
ACTL6B	TBX3	0.249	1
APC	CDH1	0.249	1
CDKN1B	TBX3	0.249	1
KCNN3	Del_1p22.1	0.249	1
NF1	PTPN22	0.249	1
NF1	1q-Del	0.249	1
SPEN	TBL1XR1	0.249	1
TBL1XR1	Del_1p22.1	0.249	1
Amp_3p25.1	Amp_11p13	0.249	1
Amp_11p13	Del_7p22.3	0.249	1
ICOSLG	7p-Amp	0.25	1
PTEN	8p-Amp	0.25	1
PTEN	18p-Del	0.25	1
18q-Del	Amp_8p11.23	0.25	1
Amp_8q24.21	Del_1p22.1	0.25	1
Amp_12q15	Del_12p13.1	0.25	1
Del_7q36.1	Del_12p13.1	0.25	1
Del_10q26.3	Del_16q24.3	0.25	1
EYS	FRMPD2	0.251	1
HRNR	7q-Amp	0.251	1
MAP3K1	Del_9q21.11	0.251	1
NCOR1	15q-Del	0.251	1
8q-Amp	Del_6p25.3	0.251	1
Amp_1q21.3	Del_4p16.3	0.251	1
Amp_19q12	Del_10q23.31	0.251	1
Del_1p22.1	Del_20p13	0.251	1
ERBB2	16q-Del	0.252	1
FOXA1	16p-Amp	0.252	1
SMAD4	17q-Amp	0.252	1
SMAD4	Amp_4q13.3	0.252	1
TFE3	17q-Amp	0.252	1
ZFP36L2	17q-Amp	0.252	1
1q-Amp	20q-Amp	0.252	1
1q-Amp	8p-Amp	0.252	1
5p-Amp	7p-Amp	0.252	1
7p-Amp	Amp_6q21	0.252	1
FOXA1	TGS1	0.253	1
GPRIN2	Amp_6p23	0.253	1
IL1RAP	Del_5q11.2	0.253	1
KCNN3	Del_5q11.2	0.253	1
TAF1L	Amp_19q13.42	0.253	1
20p-Amp	Del_17q21.31	0.253	1
8p-Amp	Amp_13q34	0.253	1
11q-Del	Del_4q35.1	0.253	1
18p-Del	Amp_13q34	0.253	1
CDH1	Del_11q13.1	0.254	1
MLL3	ZNF362	0.254	1
NCDN	Del_7q36.1	0.254	1
PTEN	4q-Del	0.254	1
PTPN22	8p-Amp	0.254	1
RAB42	Amp_12q15	0.254	1
RAB42	Del_7q36.1	0.254	1
ZNF362	Amp_12q15	0.254	1
20q-Amp	Del_4p16.3	0.254	1
20q-Amp	Del_5q11.2	0.254	1
16p-Del	Del_21q11.2	0.254	1
18p-Del	1q-Del	0.254	1
Amp_11q14.1	Del_5q11.2	0.254	1
Amp_12q15	Amp_17q12	0.254	1
RUFY1	Del_17p12	0.255	1
9p-Del	Amp_12p13.33	0.255	1
Amp_1p22.3	Del_12q24.31	0.255	1
HRNR	IL1RAP	0.256	1
1q-Amp	11p-Del	0.256	1
Amp_6p23	Amp_11q13.3	0.256	1
Amp_11q13.3	Del_12q23.1	0.256	1
Amp_11q13.3	Del_17q21.31	0.256	1
Amp_19q13.42	Del_11q23.3	0.256	1
CDKN1B	RUNX1	0.257	1
MUC6	Del_9p23	0.257	1
PTEN	TPP2	0.257	1
PTPN22	RUNX1	0.257	1
TGS1	Del_16q24.3	0.257	1
7p-Amp	Del_11q23.3	0.257	1
14q-Del	Amp_6p23	0.257	1
5q-Del	Del_1p22.1	0.257	1
Amp_6p23	Del_21q11.2	0.257	1
Amp_10p15.1	Amp_12q15	0.257	1
Amp_10p15.1	Del_17p12	0.257	1
Amp_10q22.3	Del_4p16.3	0.257	1
Amp_14q21.1	Del_20p13	0.257	1
IL1RAP	1q-Amp	0.258	1
PAX2	Amp_19q12	0.258	1
PAX2	Del_21q11.2	0.258	1
PTPN22	4p-Del	0.258	1
RAB42	Amp_19q12	0.258	1
TGS1	Del_3p21.31	0.258	1
VCPIP1	1q-Amp	0.258	1
ZNF362	Amp_19q12	0.258	1
ZNF362	Del_21q11.2	0.258	1
APC	Amp_11q14.1	0.259	1
ICOSLG	13q-Del	0.259	1
MLL3	MUC6	0.259	1
MUC6	Amp_12q15	0.259	1
MUC6	Del_7q36.1	0.259	1
NF1	18q-Del	0.259	1
PIK3R1	Del_7q36.1	0.259	1
RB1	Del_12q23.1	0.259	1
RBMX	Amp_20q13.2	0.259	1
SF3B1	Amp_11q14.1	0.259	1
20q-Amp	Amp_4q13.3	0.259	1
20q-Amp	Amp_6q21	0.259	1
7p-Amp	Del_8p23.2	0.259	1
ERBB2	KDM6A	0.26	1
ERBB2	ZMYM3	0.26	1
FBXW7	RB1	0.26	1
RB1	ZMYM3	0.26	1
TAF1L	Amp_3q26.32	0.26	1
ZMYM3	17p-Del	0.26	1
ARID1A	IRS4	0.261	1
ARID1A	NLGN3	0.261	1
CASZ1	CBFB	0.261	1
CBFB	RBMX	0.261	1
FGFR2	Amp_1q21.3	0.261	1
NCDN	Amp_12p13.33	0.261	1
PAX2	Amp_12p13.33	0.261	1
PAX2	Del_9q21.11	0.261	1
ZFP36L1	Amp_8p11.23	0.261	1
ZNF362	Amp_12p13.33	0.261	1
ACTL6B	Del_10q26.3	0.262	1
ARID1A	Del_10q23.31	0.262	1
FBXW7	Del_14q24.1	0.262	1
ZMYM3	1q-Amp	0.262	1
17q-Amp	Del_7p22.3	0.262	1
1q-Del	Del_10q26.3	0.262	1
Amp_1q44	Amp_11q14.1	0.262	1
Amp_3p25.1	Amp_4q13.3	0.262	1
Amp_4q13.3	Del_7p22.3	0.262	1
AQP12A	TP53	0.263	1
ARID1A	Amp_8q24.21	0.263	1
C17orf95	8p-Del	0.263	1
FBXW7	Amp_8q24.21	0.263	1
IL1RAP	MAP2K4	0.263	1
KRAS	TP53	0.263	1
MAP2K4	7q-Amp	0.263	1
NBPF9	5q-Del	0.263	1
NBPF9	8p-Del	0.263	1
RB1	Del_13q14.2	0.263	1
SMAD2	Del_11q25	0.263	1
8q-Amp	Amp_11q14.1	0.263	1
MAP3K1	NCDN	0.264	1
NCDN	4q-Del	0.264	1
PAX2	4q-Del	0.264	1
TBL1XR1	Amp_11q14.1	0.264	1
TPP2	16p-Del	0.264	1
ZNF362	4q-Del	0.264	1
8q-Amp	Del_14q24.1	0.264	1
Amp_1p22.3	Amp_19p13.12	0.264	1
FOXA1	Amp_19p13.12	0.265	1
MUC6	14q-Del	0.265	1
MUC6	Del_21q11.2	0.265	1
5p-Amp	Amp_15q26.3	0.265	1
Amp_1q44	Amp_17q23.1	0.265	1
Del_5q21.3	Del_7q36.1	0.265	1
C17orf95	Del_16q24.3	0.266	1
CASZ1	Del_22q13.32	0.266	1
CDH1	Amp_11q14.1	0.266	1
ERBB2	1p-Del	0.266	1
NBPF9	Del_16q24.3	0.266	1
RB1	1p-Del	0.266	1
RBMX	Amp_8p11.21	0.266	1
8p-Amp	16q-Del	0.266	1
Del_2q37.3	Del_6p25.3	0.266	1
EYS	MUC6	0.267	1
EYS	PIK3R1	0.267	1
FOXA1	Del_1p36.13	0.267	1
MLL3	Del_18q23	0.267	1
1q-Del	Del_10q23.31	0.267	1
22q-Del	5q-Del	0.267	1
Amp_14q21.1	Del_6q27	0.267	1
Amp_15q26.3	Del_21q11.2	0.267	1
CBFB	8q-Amp	0.268	1
KCNN3	Amp_20q13.2	0.268	1
TBX3	16p-Del	0.268	1
11q-Del	Del_12p13.1	0.268	1
16q-Del	Del_19q13.32	0.268	1
APC	Amp_15q26.3	0.269	1
FBXW7	Del_20p13	0.269	1
TFE3	Amp_19p13.12	0.269	1
ZMYM3	15q-Del	0.269	1
1q-Amp	Amp_6p23	0.269	1
20q-Amp	17p-Del	0.269	1
FGFR2	NF1	0.27	1
FGFR2	PIK3CA	0.27	1
GPRIN2	TBX3	0.27	1
IL1RAP	Del_17p12	0.27	1
IRS4	NF1	0.27	1
IRS4	20p-Amp	0.27	1
NF1	NLGN3	0.27	1
NLGN3	PIK3CA	0.27	1
16q-Del	Del_9q21.11	0.27	1
Amp_1q44	Amp_12p13.33	0.27	1
ERBB2	17p-Del	0.271	1
FOXA1	RBMX	0.271	1
MUC6	Del_9q21.11	0.271	1
NCDN	Del_12p13.1	0.271	1
NCOR1	Del_19q13.32	0.271	1
RB1	17p-Del	0.271	1
ZMYM3	Del_19p13.3	0.271	1
ACTL6B	7q-Amp	0.272	1
ARID1A	16q-Del	0.272	1
CDC42EP1	Amp_8p11.21	0.272	1
CDC42EP1	Del_22q13.32	0.272	1
CDH1	11q-Del	0.272	1
GATA3	TBX3	0.272	1
GPS2	SPEN	0.272	1
GPS2	7q-Amp	0.272	1
NBPF9	Amp_8p11.21	0.272	1
NF1	Del_18q23	0.272	1
SPEN	1q-Del	0.272	1
5p-Amp	Amp_11q13.3	0.272	1
1p-Del	Amp_1p22.3	0.272	1
8p-Del	Amp_3q26.32	0.272	1
Amp_6q21	Amp_11q13.3	0.272	1
GATA3	Amp_1p22.3	0.273	1
KCNN3	Del_22q13.32	0.273	1
NF1	Del_20p13	0.273	1
RB1	Amp_17q23.1	0.273	1
7p-Amp	5q-Del	0.273	1
Amp_12q15	Del_6p25.3	0.273	1
AQP12A	Del_12q23.1	0.274	1
ICOSLG	Del_12q23.1	0.274	1
ICOSLG	Del_12q24.31	0.274	1
MED23	Del_18q23	0.274	1
PIK3R1	Del_18q23	0.274	1
RUFY1	Del_12q24.31	0.274	1
TCP11	Del_12q24.31	0.274	1
Amp_6p23	Amp_10q22.3	0.274	1
APC	RB1	0.275	1
IL1RAP	Del_15q13.1	0.275	1
KCNN3	Del_15q13.1	0.275	1
RB1	18q-Del	0.275	1
TBL1XR1	Del_4q35.1	0.275	1
20p-Amp	Del_19p13.3	0.275	1
17q-Del	Amp_8p11.23	0.275	1
1q-Del	Amp_10p15.1	0.275	1
Amp_12p13.33	Del_12p13.1	0.275	1
ARID1A	Del_7q36.1	0.276	1
CTCF	Del_11q23.3	0.276	1
MAP3K1	MED23	0.276	1
MED23	4q-Del	0.276	1
MUC6	4q-Del	0.276	1
NCOR1	TPP2	0.276	1
PIK3CA	20p-Amp	0.276	1
PIK3R1	4q-Del	0.276	1
SMAD2	11q-Del	0.276	1
18p-Del	Del_12p13.1	0.276	1
Amp_3p25.1	Del_22q13.32	0.276	1
Amp_8p11.21	Del_17p12	0.276	1
Amp_19p13.12	Del_9p23	0.276	1
Del_5q21.3	Del_11q13.1	0.276	1
NCDN	Del_6p25.3	0.277	1
PAX2	Del_6p25.3	0.277	1
PTEN	Del_9p23	0.277	1
RBMX	Amp_8q24.21	0.277	1
Amp_3p25.1	Del_10q23.31	0.277	1
CBFB	MUC6	0.278	1
MLL3	NCOR1	0.278	1
NLGN3	RUNX1	0.278	1
PAX2	Del_11q25	0.278	1
ZBTB7C	Del_11q25	0.278	1
11q-Del	Amp_15q26.3	0.278	1
Amp_4q13.3	Del_13q14.2	0.278	1
AQP12A	Amp_14q21.1	0.279	1
CDKN1B	Amp_1p22.3	0.279	1
GATA3	7p-Amp	0.279	1
ICOSLG	1p-Del	0.279	1
NF1	9p-Del	0.279	1
RUFY1	1p-Del	0.279	1
SMAD2	Del_9p21.3	0.279	1
SMAD4	Del_9p21.3	0.279	1
TCP11	Amp_14q21.1	0.279	1
17q-Amp	Del_11q23.3	0.279	1
7p-Amp	4p-Del	0.279	1
8q-Amp	6q-Del	0.279	1
5q-Del	Del_6p25.3	0.279	1
Amp_12q15	Del_17p12	0.279	1
C17orf95	Amp_15q26.3	0.28	1
CDC42EP1	Amp_15q26.3	0.28	1
HRNR	1q-Del	0.28	1
NBPF9	Amp_15q26.3	0.28	1
SMAD2	Del_7p22.3	0.28	1
16p-Amp	Del_11q25	0.28	1
Amp_3p25.1	Del_19p13.3	0.28	1
ARID1A	MYB	0.281	1
MLL3	Amp_1q44	0.281	1
RB1	22q-Del	0.281	1
USP36	17p-Del	0.281	1
ZFP36L1	17p-Del	0.281	1
11p-Del	Amp_3p25.1	0.281	1
1p-Del	Amp_3q26.32	0.281	1
Amp_3p25.1	Del_9q34.2	0.281	1
Del_6q15	Del_12q24.31	0.281	1
TPP2	17q-Amp	0.282	1
TPP2	Amp_4q13.3	0.282	1
TPP2	Del_8p23.2	0.282	1
USP36	17q-Amp	0.282	1
USP36	Amp_4q13.3	0.282	1
USP36	Del_8p23.2	0.282	1
ZFP36L1	Amp_4q13.3	0.282	1
11p-Del	Amp_19q13.42	0.282	1
EYS	FBXW7	0.283	1
EYS	KDM6A	0.283	1
EYS	ZMYM3	0.283	1
PTEN	Del_11q25	0.283	1
7q-Amp	Del_14q24.1	0.283	1
1q-Del	Amp_3q26.32	0.283	1
1q-Del	Amp_17q23.1	0.283	1
9q-Del	Amp_13q34	0.283	1
APC	Amp_17q12	0.284	1
CBFB	Del_22q13.32	0.284	1
FOXA1	11p-Del	0.284	1
GPRIN2	Amp_17q12	0.284	1
IL1RAP	PTEN	0.284	1
PTEN	TBL1XR1	0.284	1
PTEN	VCPIP1	0.284	1
Amp_1q44	Amp_20q13.2	0.284	1
HRNR	17p-Del	0.285	1
NF1	Del_10q23.31	0.285	1
SMAD4	7p-Amp	0.285	1
5p-Amp	8p-Amp	0.285	1
5p-Amp	Del_15q13.1	0.285	1
Amp_6q21	Del_18q23	0.285	1
20p-Amp	Del_7q36.1	0.286	1
7p-Amp	Amp_1q44	0.286	1
16p-Del	Del_12q24.31	0.286	1
Amp_10p15.1	Del_9q21.11	0.286	1
Amp_12q15	Del_11q13.1	0.286	1
Amp_12q15	Del_14q24.1	0.286	1
Del_7q36.1	Del_14q24.1	0.286	1
ARID1A	Amp_3q26.32	0.287	1
NCDN	Del_9q34.2	0.287	1
PAX2	Del_9q34.2	0.287	1
TGS1	TP53	0.287	1
ZMYM3	Amp_12q15	0.287	1
7p-Amp	9p-Del	0.287	1
CDKN1B	MAP2K4	0.288	1
FGFR2	18q-Del	0.288	1
GPS2	MAP2K4	0.288	1
MAP2K4	PTPN22	0.288	1
MAP2K4	1q-Del	0.288	1
NLGN3	18q-Del	0.288	1
PIK3CA	Del_22q13.32	0.288	1
Amp_1q21.3	Del_11q25	0.288	1
Amp_8p11.23	Del_9q34.2	0.288	1
Amp_19p13.12	Del_1p22.1	0.288	1
FOXA1	MUC6	0.289	1
RBMX	Del_2q37.3	0.289	1
TPP2	Amp_10q22.3	0.289	1
13q-Del	Amp_19q13.42	0.289	1
15q-Del	Amp_11q14.1	0.289	1
Amp_11q14.1	Del_20p13	0.289	1
FBXW7	TP53	0.29	1
NCDN	Del_2q37.3	0.29	1
6q-Del	Amp_17q12	0.29	1
ACTL6B	Del_1p22.1	0.291	1
C17orf95	Amp_11q13.3	0.291	1
CDKN1B	Del_1p22.1	0.291	1
IL1RAP	16p-Del	0.291	1
NF1	TGS1	0.291	1
SPEN	Del_16q24.3	0.291	1
TBX3	TGS1	0.291	1
TFE3	Del_19q13.32	0.291	1
ZFP36L2	Del_19q13.32	0.291	1
22q-Del	Amp_12q15	0.291	1
ACTL6B	Del_16q24.3	0.292	1
ERBB2	9p-Del	0.292	1
NLGN3	8p-Amp	0.292	1
PTPN22	Del_16q24.3	0.292	1
TP53	Del_17p12	0.292	1
Amp_8p11.23	Amp_13q34	0.292	1
KDM6A	17q-Del	0.293	1
1q-Amp	Amp_10p15.1	0.293	1
18p-Del	Amp_1q44	0.293	1
18q-Del	Del_6p25.3	0.293	1
8p-Amp	Del_9p23	0.294	1
Amp_17q23.1	Del_2q37.3	0.294	1
ACTL6B	Del_4p16.3	0.295	1
ACTL6B	Del_5q11.2	0.295	1
APC	Del_20p13	0.295	1
C17orf95	9q-Del	0.295	1
CDC42EP1	15q-Del	0.295	1
CTCF	Del_20p13	0.295	1
FGFR2	SPEN	0.295	1
FGFR2	7q-Amp	0.295	1
IRS4	7q-Amp	0.295	1
MYH9	Del_8p23.2	0.295	1
MYH9	Del_20p13	0.295	1
NBPF9	15q-Del	0.295	1
SF3B1	Del_8p23.2	0.295	1
Del_9q21.11	Del_12q23.1	0.295	1
CASZ1	Amp_11q13.3	0.296	1
RB1	5p-Amp	0.296	1
RB1	Amp_19q13.42	0.296	1
8p-Amp	Del_20p13	0.296	1
16p-Del	Amp_14q21.1	0.296	1
8p-Del	Amp_6q21	0.296	1
Amp_1p22.3	Del_9q21.11	0.296	1
GATA3	NLGN3	0.297	1
Amp_17q23.1	Del_7p22.3	0.297	1
ACTL6B	Del_11q23.3	0.298	1
CDH1	Del_12q23.1	0.298	1
EYS	Del_12q24.31	0.298	1
GPS2	Del_11q23.3	0.298	1
SP3	Amp_19q13.42	0.298	1
TCP11	5p-Amp	0.298	1
ZMYM3	Del_16q24.3	0.298	1
1q-Amp	Amp_3p25.1	0.298	1
9p-Del	Amp_3q26.32	0.298	1
Amp_1p22.3	Del_2q37.3	0.298	1
ARID1A	MAP3K1	0.299	1
CDH1	GPS2	0.299	1
CDH1	Amp_11q13.3	0.299	1
CTCF	EYS	0.299	1
EYS	SF3B1	0.299	1
KCNN3	Amp_11q13.3	0.299	1
MED23	Del_6p25.3	0.299	1
TBL1XR1	Amp_1q44	0.299	1
VCPIP1	Amp_1q44	0.299	1
VCPIP1	Amp_11q13.3	0.299	1
ZFP36L2	16q-Del	0.299	1
16p-Amp	15q-Del	0.299	1
17q-Del	Amp_14q21.1	0.299	1
RUNX1	TGS1	0.3	1
VCPIP1	Del_19p13.3	0.3	1
Amp_3p25.1	Amp_19p13.12	0.3	1
Amp_10p15.1	Del_11q13.1	0.3	1
Amp_17q12	Del_5q21.3	0.3	1
ARID1A	FRMPD2	0.301	1
ARID1A	RBMX	0.301	1
FGFR2	9p-Del	0.301	1
MLL3	Del_3p21.31	0.301	1
MLL3	Del_9p21.3	0.301	1
RB1	8q-Amp	0.301	1
TPP2	8q-Amp	0.301	1
TPP2	Amp_19p13.12	0.301	1
USP36	8q-Amp	0.301	1
USP36	Amp_19p13.12	0.301	1
20p-Amp	Del_2q37.3	0.301	1
20p-Amp	Del_11q13.1	0.301	1
Amp_6p23	Del_17q21.31	0.301	1
Amp_12p13.33	Del_18q23	0.301	1
FOXA1	Del_19q13.32	0.302	1
FRMPD2	Del_9p21.3	0.302	1
MAP2K4	8p-Del	0.302	1
SMAD4	Del_6q27	0.302	1
AQP12A	Amp_11p13	0.303	1
ERBB2	11q-Del	0.303	1
ICOSLG	Amp_11p13	0.303	1
KDM6A	Amp_17q23.1	0.303	1
SMAD4	Amp_1q21.3	0.303	1
TFE3	Amp_1q21.3	0.303	1
6q-Del	Del_10q26.3	0.303	1
Amp_1q21.3	Amp_14q21.1	0.303	1
Amp_8p11.21	Del_9p21.3	0.303	1
FGFR2	HRNR	0.304	1
GPRIN2	HRNR	0.304	1
NCOR1	RUNX1	0.304	1
NF1	17q-Del	0.304	1
RB1	Amp_11p13	0.304	1
17q-Amp	Del_21q11.2	0.304	1
9p-Del	Amp_6q21	0.304	1
Amp_14q21.1	Del_6q15	0.304	1
ICOSLG	PIK3CA	0.305	1
MAP3K1	ZMYM3	0.305	1
NCOR1	VCPIP1	0.305	1
PIK3CA	RUFY1	0.305	1
PIK3CA	SP3	0.305	1
Amp_1q21.3	Del_9q21.11	0.305	1
Amp_10p15.1	Del_18q23	0.305	1
EYS	20p-Amp	0.306	1
FBXW7	FOXA1	0.306	1
FOXA1	KDM6A	0.306	1
FOXA1	ZMYM3	0.306	1
FOXA1	8p-Del	0.306	1
GATA3	15q-Del	0.306	1
NCOR1	Del_16q24.3	0.306	1
PAX2	16q-Del	0.306	1
TGS1	20p-Amp	0.306	1
16p-Del	Del_6p25.3	0.306	1
8p-Del	Del_2q37.3	0.306	1
C17orf95	Amp_12q15	0.307	1
CDC42EP1	Amp_12q15	0.307	1
ICOSLG	5q-Del	0.307	1
MLL3	NBPF9	0.307	1
MLL3	Del_5q11.2	0.307	1
NBPF9	Amp_12q15	0.307	1
RUFY1	5q-Del	0.307	1
ZMYM3	Del_17q21.31	0.307	1
20q-Amp	1q-Del	0.307	1
8q-Amp	Del_19q13.32	0.307	1
18q-Del	5q-Del	0.307	1
22q-Del	Del_5q11.2	0.307	1
9q-Del	Del_7q36.1	0.307	1
Amp_1q21.3	Del_7p22.3	0.307	1
ERBB2	Del_3p21.31	0.308	1
ERBB2	Del_9p21.3	0.308	1
HRNR	Del_11p15.5	0.308	1
17q-Amp	22q-Del	0.308	1
11p-Del	Amp_12q15	0.308	1
13q-Del	Amp_4q13.3	0.308	1
Amp_14q21.1	Del_5q11.2	0.308	1
NCDN	Amp_6p23	0.309	1
RB1	Amp_10p15.1	0.309	1
SMAD2	Del_11q23.3	0.309	1
SMAD4	Del_11q23.3	0.309	1
1q-Amp	Del_18q23	0.309	1
18p-Del	Amp_1q21.3	0.309	1
MAP2K4	Amp_6p23	0.31	1
SPEN	16p-Del	0.31	1
11q-Del	Del_21q11.2	0.31	1
17q-Del	Amp_20q13.2	0.31	1
9p-Del	Amp_8p11.23	0.31	1
Amp_14q21.1	Del_5q21.3	0.31	1
Amp_14q21.1	Del_9q21.11	0.31	1
APC	CBFB	0.311	1
CDC42EP1	17q-Del	0.311	1
CDKN1B	PTEN	0.311	1
CTCF	17p-Del	0.311	1
FRMPD2	TBX3	0.311	1
NBPF9	14q-Del	0.311	1
NBPF9	17q-Del	0.311	1
NF1	RBMX	0.311	1
RBMX	TBX3	0.311	1
16p-Amp	Del_8p23.2	0.311	1
5p-Amp	15q-Del	0.311	1
5p-Amp	9q-Del	0.311	1
8p-Amp	Del_9p21.3	0.311	1
Amp_8p11.23	Del_18q23	0.311	1
AQP12A	Amp_17q23.1	0.312	1
ARID1A	CDH1	0.312	1
GPRIN2	MAP2K4	0.312	1
IL1RAP	Amp_4q13.3	0.312	1
KCNN3	17q-Amp	0.312	1
KDM6A	Del_18q23	0.312	1
SMAD4	Del_12q24.31	0.312	1
TBX3	Del_9q21.11	0.312	1
TFE3	Del_12q23.1	0.312	1
TFE3	Del_12q24.31	0.312	1
TP53	8p-Del	0.312	1
ZMYM3	Del_18q23	0.312	1
20p-Amp	Del_12q23.1	0.312	1
Del_11q13.1	Del_12q23.1	0.312	1
NCOR1	1q-Amp	0.313	1
PTEN	Del_9q34.2	0.313	1
TPP2	Del_7p22.3	0.313	1
ZFP36L1	Amp_3p25.1	0.313	1
17q-Amp	Del_9q21.11	0.313	1
5p-Amp	Del_10q23.31	0.313	1
Amp_14q21.1	Del_9p23	0.313	1
Del_1p22.1	Del_21q11.2	0.313	1
MLL3	MYH9	0.314	1
MYH9	Del_7q36.1	0.314	1
PAX2	Del_11q23.3	0.314	1
SF3B1	Amp_12q15	0.314	1
ZBTB7C	Del_11q23.3	0.314	1
Amp_1q21.3	Amp_8q24.21	0.314	1
C17orf95	Del_9q21.11	0.315	1
CDC42EP1	Del_9q21.11	0.315	1
ERBB2	1q-Amp	0.315	1
IRS4	Amp_10p15.1	0.315	1
MUC6	Del_9q34.2	0.315	1
NBPF9	Amp_12p13.33	0.315	1
NCOR1	Del_12q24.31	0.315	1
RUNX1	Amp_4q13.3	0.315	1
20p-Amp	Del_9q21.11	0.315	1
Amp_8p11.21	Del_12q23.1	0.315	1
Amp_8p11.21	Del_12q24.31	0.315	1
Amp_12p13.33	Del_11q13.1	0.315	1
Del_4q35.1	Del_6q15	0.315	1
NCDN	Del_5q21.3	0.316	1
RUNX1	Amp_12q15	0.316	1
RUNX1	Del_7q36.1	0.316	1
ZNF362	Del_5q21.3	0.316	1
20q-Amp	Del_12q23.1	0.316	1
6q-Del	Del_10q23.31	0.316	1
Del_12p13.1	Del_15q13.1	0.316	1
FBXW7	Del_12p13.1	0.317	1
KDM6A	Del_12p13.1	0.317	1
MUC6	Amp_8p11.21	0.317	1
ZFP36L2	Del_6q15	0.317	1
18p-Del	5q-Del	0.317	1
Del_16q24.3	Del_19q13.32	0.317	1
CDH1	MLL3	0.318	1
KCNN3	Amp_10q22.3	0.318	1
PTPN22	16p-Del	0.318	1
SMAD2	1p-Del	0.318	1
Amp_6q21	Del_12q23.1	0.318	1
Amp_12p13.33	Amp_17q23.1	0.318	1
C17orf95	MAP3K1	0.319	1
CDKN1B	Del_4q35.1	0.319	1
IRS4	Amp_1p22.3	0.319	1
KCNN3	Del_9p23	0.319	1
NLGN3	Amp_1p22.3	0.319	1
TBX3	8q-Amp	0.319	1
7q-Amp	Del_11q23.3	0.319	1
6q-Del	Del_7q36.1	0.319	1
ARID1A	MED23	0.32	1
CASZ1	RUNX1	0.32	1
MAP3K1	NF1	0.32	1
Amp_11q14.1	Amp_19p13.12	0.32	1
Amp_19q12	Del_11q25	0.32	1
MUC6	Del_2q37.3	0.321	1
Del_1p22.1	Del_5q21.3	0.321	1
NCDN	20p-Amp	0.322	1
ZBTB7C	20p-Amp	0.322	1
ZBTB7C	Del_11q13.1	0.322	1
ZNF362	20p-Amp	0.322	1
6q-Del	Amp_1q21.3	0.322	1
Del_9q34.2	Del_21q11.2	0.322	1
APC	FOXA1	0.323	1
FOXA1	SF3B1	0.323	1
NCOR1	11q-Del	0.323	1
PTEN	Amp_6q21	0.323	1
TP53	18p-Del	0.323	1
6q-Del	Del_9q34.2	0.323	1
Amp_17q23.1	Del_12q24.31	0.323	1
FGFR2	Amp_3q26.32	0.324	1
MLL3	13q-Del	0.324	1
16q-Del	Amp_11q14.1	0.324	1
Amp_3q26.32	Amp_11q14.1	0.324	1
AQP12A	Amp_15q26.3	0.325	1
RUFY1	Amp_15q26.3	0.325	1
TPP2	Del_19q13.32	0.325	1
8p-Amp	Del_11p15.5	0.325	1
15q-Del	Amp_11p13	0.325	1
C17orf95	Del_12p13.1	0.326	1
HRNR	TGS1	0.326	1
NBPF9	Del_12p13.1	0.326	1
PIK3R1	Amp_1q21.3	0.326	1
SMAD2	13q-Del	0.326	1
17q-Del	Amp_8p11.21	0.326	1
Amp_8p11.23	Del_12q24.31	0.326	1
Amp_8p11.21	Del_21q11.2	0.326	1
Amp_19q12	Del_22q13.32	0.326	1
Del_5q21.3	Del_6q15	0.326	1
CBFB	TAF1L	0.327	1
CBFB	1p-Del	0.327	1
CBFB	Amp_14q21.1	0.327	1
Amp_17q12	Amp_19q13.42	0.327	1
Del_4p16.3	Del_16q24.3	0.327	1
NBPF9	Del_13q14.2	0.328	1
SPEN	18q-Del	0.328	1
TFE3	Amp_13q34	0.328	1
ZFP36L2	Amp_13q34	0.328	1
1p-Del	Amp_20q13.2	0.328	1
NBPF9	Amp_1q21.3	0.329	1
20p-Amp	1p-Del	0.329	1
KCNN3	Amp_8p11.23	0.33	1
MED23	NF1	0.33	1
MED23	TBX3	0.33	1
PIK3R1	TBX3	0.33	1
TFE3	Amp_8q24.21	0.33	1
TGS1	18p-Del	0.33	1
VCPIP1	Amp_8p11.23	0.33	1
20p-Amp	Amp_15q26.3	0.33	1
Amp_4q13.3	Del_12q23.1	0.33	1
Amp_11p13	Del_12q23.1	0.33	1
Amp_11p13	Del_12q24.31	0.33	1
HRNR	Del_1p36.13	0.331	1
MLL3	18q-Del	0.331	1
ZNF362	6q-Del	0.331	1
20q-Amp	Del_15q13.1	0.331	1
22q-Del	Amp_6p23	0.331	1
ARID1A	16p-Amp	0.332	1
RB1	Del_1p22.1	0.332	1
VCPIP1	Amp_19p13.12	0.332	1
1q-Amp	18p-Del	0.332	1
Amp_19p13.12	Del_6q27	0.332	1
ACTL6B	NCOR1	0.333	1
C17orf95	17p-Del	0.333	1
CDC42EP1	17p-Del	0.333	1
CDKN1B	NCOR1	0.333	1
17q-Amp	Del_19p13.3	0.333	1
5p-Amp	Amp_10p15.1	0.333	1
Amp_8q24.21	Del_22q13.32	0.333	1
C17orf95	Del_6p25.3	0.334	1
ERBB2	Del_17p12	0.334	1
KCNN3	Del_18q23	0.334	1
PAX2	18q-Del	0.334	1
RB1	Del_17p12	0.334	1
ZBTB7C	18q-Del	0.334	1
1q-Amp	7p-Amp	0.334	1
ARID1A	Del_7p22.3	0.335	1
MAP2K4	TGS1	0.335	1
TPP2	11q-Del	0.335	1
20q-Amp	1p-Del	0.335	1
FGFR2	PTEN	0.336	1
GPRIN2	PTEN	0.336	1
GPS2	Amp_8p11.21	0.336	1
NLGN3	PTEN	0.336	1
USP36	Del_16q24.3	0.336	1
Amp_3p25.1	Del_5q11.2	0.336	1
EYS	18p-Del	0.337	1
FGFR2	Del_5q11.2	0.337	1
PAX2	8p-Amp	0.337	1
PAX2	18p-Del	0.337	1
ZBTB7C	18p-Del	0.337	1
16p-Amp	Amp_3q26.32	0.337	1
MED23	16q-Del	0.338	1
MUC6	16q-Del	0.338	1
RB1	Del_4p16.3	0.338	1
SMAD4	5p-Amp	0.338	1
TFE3	Amp_6q21	0.338	1
TFE3	Amp_19q13.42	0.338	1
ZFP36L2	Amp_19q13.42	0.338	1
7p-Amp	22q-Del	0.338	1
8p-Amp	Del_5q21.3	0.338	1
1p-Del	Del_17q21.31	0.338	1
Amp_14q21.1	Del_17q21.31	0.338	1
Del_6p25.3	Del_12p13.1	0.338	1
FGFR2	Amp_17q23.1	0.339	1
FOXA1	TAF1L	0.339	1
GATA3	17q-Amp	0.339	1
GATA3	Amp_4q13.3	0.339	1
MAP3K1	Amp_8q24.21	0.339	1
NCDN	1q-Amp	0.339	1
RAB42	1q-Amp	0.339	1
RBMX	7q-Amp	0.339	1
20q-Amp	Del_7q36.1	0.339	1
4q-Del	Amp_8q24.21	0.339	1
Amp_6p23	Amp_11q14.1	0.339	1
APC	Del_17p12	0.34	1
ARID1A	Del_3p21.31	0.34	1
CDKN1B	17q-Amp	0.34	1
CDKN1B	Amp_4q13.3	0.34	1
GATA3	NCDN	0.34	1
GATA3	PAX2	0.34	1
GATA3	ZBTB7C	0.34	1
GATA3	Del_14q24.1	0.34	1
MYH9	Del_17p12	0.34	1
NCDN	4p-Del	0.34	1
PAX2	4p-Del	0.34	1
PTPN22	Del_11p15.5	0.34	1
PTPN22	Del_14q24.1	0.34	1
SMAD2	Amp_17q12	0.34	1
TFE3	Amp_17q12	0.34	1
TGS1	Del_10q26.3	0.34	1
ZNF362	4p-Del	0.34	1
17q-Amp	1q-Del	0.34	1
1q-Amp	Amp_12q15	0.34	1
1q-Del	Del_11p15.5	0.34	1
4q-Del	Amp_10q22.3	0.34	1
CDH1	IRS4	0.341	1
PIK3R1	11q-Del	0.341	1
SMAD2	1q-Amp	0.341	1
TFE3	1q-Amp	0.341	1
8p-Amp	17p-Del	0.341	1
Amp_1p22.3	Del_19q13.32	0.341	1
Amp_8p11.21	Del_2q37.3	0.341	1
Amp_10q22.3	Del_11p15.5	0.341	1
FRMPD2	20p-Amp	0.342	1
GATA3	7q-Amp	0.342	1
SP3	Del_8p23.2	0.342	1
TCP11	Del_8p23.2	0.342	1
17q-Amp	Del_12p13.1	0.342	1
1q-Amp	Amp_17q12	0.342	1
AQP12A	9q-Del	0.343	1
HRNR	6q-Del	0.343	1
ICOSLG	9q-Del	0.343	1
NCDN	9p-Del	0.343	1
PAX2	Del_10q26.3	0.343	1
PIK3R1	Del_8p23.2	0.343	1
RUFY1	Del_20p13	0.343	1
SMAD2	Amp_11p13	0.343	1
TFE3	Amp_11p13	0.343	1
ZBTB7C	Del_10q26.3	0.343	1
ZNF362	9p-Del	0.343	1
Amp_1p22.3	Amp_6q21	0.343	1
Amp_1p22.3	Amp_19q13.42	0.343	1
Amp_1p22.3	Del_12p13.1	0.343	1
NBPF9	Amp_1q44	0.344	1
4p-Del	Amp_17q12	0.344	1
Amp_11p13	Amp_14q21.1	0.344	1
Amp_19p13.12	Del_7q36.1	0.344	1
APC	Del_17q21.31	0.345	1
C17orf95	Del_9q34.2	0.345	1
ERBB2	EYS	0.345	1
EYS	RB1	0.345	1
IL1RAP	Amp_3p25.1	0.345	1
MYH9	Del_12p13.1	0.345	1
NBPF9	Del_9q34.2	0.345	1
RB1	Del_22q13.32	0.345	1
SF3B1	Del_12p13.1	0.345	1
SF3B1	Del_17q21.31	0.345	1
VCPIP1	Del_7p22.3	0.345	1
8q-Amp	Del_1p22.1	0.345	1
15q-Del	Amp_3p25.1	0.345	1
Amp_10q22.3	Del_12q24.31	0.345	1
MLL3	5p-Amp	0.346	1
MUC6	Del_9p21.3	0.346	1
PAX2	Del_10q23.31	0.346	1
PIK3R1	Del_3p21.31	0.346	1
PIK3R1	Del_9p21.3	0.346	1
TCP11	8p-Del	0.346	1
ZBTB7C	Del_10q23.31	0.346	1
20p-Amp	Amp_19p13.12	0.346	1
17p-Del	Amp_13q34	0.346	1
Amp_6q21	Del_7q36.1	0.346	1
ACTL6B	Amp_10q22.3	0.347	1
TAF1L	17q-Del	0.347	1
TAF1L	Amp_19q12	0.347	1
17q-Amp	9p-Del	0.347	1
17q-Amp	Del_10q26.3	0.347	1
9p-Del	Amp_4q13.3	0.347	1
Amp_1p22.3	Del_6q15	0.347	1
ACTL6B	Del_19p13.3	0.348	1
EYS	Amp_11p13	0.348	1
HRNR	RBMX	0.348	1
TFE3	5q-Del	0.348	1
TPP2	Del_12q23.1	0.348	1
VCPIP1	Del_13q14.2	0.348	1
ZFP36L2	5q-Del	0.348	1
Amp_1q44	Amp_14q21.1	0.348	1
Amp_8p11.23	Del_11p15.5	0.348	1
APC	Amp_17q23.1	0.349	1
C17orf95	Del_2q37.3	0.349	1
ERBB2	TP53	0.349	1
FBXW7	TBX3	0.349	1
1q-Amp	15q-Del	0.349	1
16p-Del	Amp_11p13	0.349	1
9q-Del	Amp_10p15.1	0.349	1
Amp_20q13.2	Del_5q11.2	0.349	1
EYS	9p-Del	0.35	1
IRS4	Amp_11q14.1	0.35	1
NBPF9	8q-Amp	0.35	1
SPEN	Del_10q26.3	0.35	1
7p-Amp	16q-Del	0.35	1
Amp_8p11.21	Del_9p23	0.35	1
PIK3CA	22q-Del	0.351	1
SP3	Amp_20q13.2	0.351	1
ARID1A	Amp_1q21.3	0.352	1
ARID1A	Del_16q24.3	0.352	1
FBXW7	Del_2q37.3	0.352	1
FOXA1	Amp_17q12	0.352	1
KDM6A	Del_2q37.3	0.352	1
PIK3R1	Del_11q23.3	0.352	1
20q-Amp	Del_1p22.1	0.352	1
Amp_1p22.3	Amp_3q26.32	0.352	1
ARID1A	11p-Del	0.353	1
CDC42EP1	Amp_8q24.21	0.353	1
SMAD4	Del_17p12	0.353	1
TFE3	Del_17p12	0.353	1
TGS1	Amp_1q21.3	0.353	1
ZFP36L2	Del_17p12	0.353	1
17q-Amp	Del_16q24.3	0.353	1
Amp_17q23.1	Del_5q21.3	0.353	1
EYS	Amp_17q23.1	0.354	1
RBMX	Del_13q14.2	0.354	1
SPEN	Del_18q23	0.354	1
TPP2	1p-Del	0.354	1
USP36	Amp_14q21.1	0.354	1
8q-Amp	17p-Del	0.354	1
Amp_3q26.32	Del_12p13.1	0.354	1
ERBB2	Amp_11q14.1	0.355	1
NCDN	Amp_1p22.3	0.355	1
RAB42	Amp_1p22.3	0.355	1
ZBTB7C	Amp_1p22.3	0.355	1
AQP12A	MLL3	0.356	1
AQP12A	Del_7q36.1	0.356	1
ARID1A	Del_11q25	0.356	1
HRNR	Del_6q27	0.356	1
ICOSLG	Del_7q36.1	0.356	1
KRAS	MLL3	0.356	1
MLL3	SP3	0.356	1
RUFY1	Del_7q36.1	0.356	1
SP3	Del_22q13.32	0.356	1
TCP11	Amp_12q15	0.356	1
Amp_4q13.3	Del_3p21.31	0.356	1
Del_7q36.1	Del_9p23	0.356	1
ARID1A	CTCF	0.357	1
ARID1A	SF3B1	0.357	1
MAP2K4	RBMX	0.357	1
SPEN	Amp_12q15	0.357	1
SPEN	Del_10q23.31	0.357	1
7p-Amp	Del_4p16.3	0.357	1
CBFB	ERBB2	0.358	1
FBXW7	PIK3CA	0.358	1
IL1RAP	Del_19q13.32	0.358	1
PAX2	Amp_3q26.32	0.358	1
RAB42	Amp_3q26.32	0.358	1
ZNF362	Amp_3q26.32	0.358	1
16p-Del	Amp_11q13.3	0.358	1
Amp_1q44	Del_9q21.11	0.358	1
Amp_6q21	Del_21q11.2	0.358	1
FOXA1	20p-Amp	0.359	1
GPRIN2	NCOR1	0.359	1
MYB	Amp_1p22.3	0.359	1
NCOR1	Amp_1p22.3	0.359	1
4p-Del	Amp_10q22.3	0.359	1
KDM6A	RUNX1	0.36	1
PIK3R1	SPEN	0.36	1
RUNX1	ZMYM3	0.36	1
4p-Del	Amp_20q13.2	0.36	1
9q-Del	Amp_1p22.3	0.36	1
ACTL6B	Amp_19p13.12	0.361	1
AQP12A	14q-Del	0.361	1
AQP12A	17q-Del	0.361	1
FBXW7	Amp_20q13.2	0.361	1
ICOSLG	Amp_19q12	0.361	1
NLGN3	16q-Del	0.361	1
PTPN22	Amp_19p13.12	0.361	1
RB1	16p-Amp	0.361	1
RUFY1	14q-Del	0.361	1
TCP11	Del_21q11.2	0.361	1
17q-Amp	Del_6p25.3	0.361	1
7p-Amp	9q-Del	0.361	1
7p-Amp	Del_20p13	0.361	1
Amp_4q13.3	Del_6p25.3	0.361	1
Amp_11p13	Amp_12q15	0.361	1
SMAD2	TP53	0.362	1
TFE3	TP53	0.362	1
Amp_1q44	Del_14q24.1	0.362	1
Amp_10p15.1	Del_6p25.3	0.362	1
Amp_17q12	Del_2q37.3	0.362	1
Del_5q11.2	Del_11q13.1	0.362	1
FGFR2	Del_15q13.1	0.363	1
20p-Amp	Amp_1q44	0.363	1
Amp_17q12	Del_10q26.3	0.363	1
PAX2	Del_1p22.1	0.364	1
RAB42	Del_1p22.1	0.364	1
USP36	Del_6q27	0.364	1
1q-Del	Amp_11q13.3	0.364	1
AQP12A	Del_9q21.11	0.365	1
ICOSLG	Amp_12p13.33	0.365	1
MLL3	Del_10q26.3	0.365	1
MUC6	Amp_8q24.21	0.365	1
RUFY1	Amp_12p13.33	0.365	1
RUFY1	Del_9q21.11	0.365	1
SP3	Del_9q21.11	0.365	1
7q-Amp	17q-Del	0.365	1
4q-Del	6q-Del	0.365	1
9p-Del	Del_7q36.1	0.365	1
Amp_1q21.3	Del_12q24.31	0.365	1
ARID1A	Amp_8p11.23	0.366	1
CASZ1	8p-Amp	0.367	1
FGFR2	17q-Amp	0.367	1
NCDN	Del_5q11.2	0.367	1
PAX2	Del_4p16.3	0.367	1
RBMX	8p-Amp	0.367	1
ZNF362	Del_4p16.3	0.367	1
CTCF	NF1	0.368	1
NF1	SF3B1	0.368	1
SMAD2	Amp_15q26.3	0.368	1
11q-Del	Amp_6p23	0.368	1
AQP12A	4q-Del	0.369	1
GATA3	Del_21q11.2	0.369	1
MAP3K1	SP3	0.369	1
RUNX1	Del_7p22.3	0.369	1
SP3	4q-Del	0.369	1
TCP11	4q-Del	0.369	1
Amp_1q44	Del_6p25.3	0.369	1
Amp_11q13.3	Del_4p16.3	0.369	1
CDH1	ZBTB7C	0.37	1
Amp_8p11.21	Del_4p16.3	0.37	1
C17orf95	Amp_6p23	0.371	1
CDC42EP1	Amp_6p23	0.371	1
ERBB2	FOXA1	0.371	1
ERBB2	Del_6q15	0.371	1
MLL3	Del_4q35.1	0.371	1
NCOR1	11p-Del	0.371	1
RB1	9q-Del	0.371	1
16p-Amp	Del_7p22.3	0.371	1
9q-Del	Amp_3q26.32	0.371	1
NF1	Del_9p21.3	0.372	1
17q-Amp	Amp_10p15.1	0.372	1
11p-Del	Amp_15q26.3	0.372	1
Amp_6q21	Del_1p22.1	0.372	1
8p-Amp	Del_9q21.11	0.373	1
14q-Del	Amp_11p13	0.373	1
6q-Del	Amp_19p13.12	0.373	1
Amp_1q44	Del_6q27	0.373	1
FGFR2	Amp_10q22.3	0.374	1
IRS4	Amp_10q22.3	0.374	1
TAF1L	Del_12p13.1	0.374	1
GATA3	Del_2q37.3	0.375	1
PTPN22	Amp_3p25.1	0.375	1
PTPN22	Del_7p22.3	0.375	1
1q-Del	Amp_3p25.1	0.375	1
1q-Del	Del_7p22.3	0.375	1
MLL3	Del_10q23.31	0.376	1
NCDN	20q-Amp	0.376	1
PAX2	Amp_11q14.1	0.376	1
TBX3	11p-Del	0.376	1
TPP2	Amp_19q13.42	0.376	1
USP36	5p-Amp	0.376	1
USP36	Amp_6q21	0.376	1
USP36	Amp_19q13.42	0.376	1
ZBTB7C	20q-Amp	0.376	1
ZFP36L1	Amp_6q21	0.376	1
ZFP36L1	Amp_19q13.42	0.376	1
ZNF362	20q-Amp	0.376	1
ZNF362	Amp_11q14.1	0.376	1
Amp_19q13.42	Del_17p12	0.376	1
HRNR	MLL3	0.377	1
MAP3K1	18q-Del	0.377	1
MED23	Del_11q13.1	0.377	1
MLL3	Del_17p12	0.377	1
PIK3R1	Del_11q13.1	0.377	1
C17orf95	Del_5q21.3	0.378	1
CASZ1	Del_10q26.3	0.378	1
FRMPD2	9p-Del	0.378	1
NBPF9	Del_5q21.3	0.378	1
RBMX	Del_10q26.3	0.378	1
VCPIP1	Del_8p23.2	0.378	1
Amp_3p25.1	Del_7q36.1	0.378	1
CTCF	RUNX1	0.379	1
EYS	Amp_8q24.21	0.379	1
MYH9	RUNX1	0.379	1
PAX2	16p-Amp	0.379	1
RUNX1	SF3B1	0.379	1
SP3	Amp_11q13.3	0.379	1
TCP11	Amp_11q13.3	0.379	1
ZBTB7C	16p-Amp	0.379	1
ZNF362	16p-Amp	0.379	1
7p-Amp	Del_1p36.13	0.379	1
Amp_4q13.3	Amp_8p11.23	0.379	1
GATA3	20p-Amp	0.38	1
GATA3	Del_11q13.1	0.38	1
GPS2	Del_17q21.31	0.38	1
ZMYM3	7q-Amp	0.38	1
7q-Amp	Amp_19p13.12	0.38	1
14q-Del	Amp_8p11.23	0.38	1
EYS	Del_3p21.31	0.381	1
FOXA1	Del_17p12	0.381	1
ZFP36L1	Del_6q15	0.381	1
17q-Amp	Amp_1p22.3	0.381	1
Amp_4q13.3	Del_17p12	0.381	1
ACTL6B	7p-Amp	0.382	1
FOXA1	Amp_19q13.42	0.382	1
HRNR	Del_18q23	0.382	1
KCNN3	Del_12q23.1	0.382	1
KCNN3	Del_12q24.31	0.382	1
USP36	Amp_11p13	0.382	1
VCPIP1	Del_12q24.31	0.382	1
7p-Amp	1q-Del	0.382	1
16p-Del	Amp_1q21.3	0.382	1
18q-Del	Amp_19p13.12	0.382	1
Amp_10q22.3	Del_3p21.31	0.382	1
Amp_19q13.42	Del_5q11.2	0.382	1
CASZ1	Del_10q23.31	0.383	1
ERBB2	Amp_1q44	0.383	1
RBMX	Del_10q23.31	0.383	1
18p-Del	Amp_1p22.3	0.383	1
CASZ1	PTEN	0.384	1
FRMPD2	PTEN	0.384	1
GPS2	Del_18q23	0.384	1
IRS4	8p-Del	0.384	1
NCOR1	Del_1p22.1	0.384	1
NLGN3	Del_16q24.3	0.384	1
PTEN	RBMX	0.384	1
17q-Amp	Del_1p36.13	0.384	1
Amp_4q13.3	Del_1p36.13	0.384	1
MYB	NCOR1	0.385	1
NCOR1	TGS1	0.385	1
ZBTB7C	Del_15q13.1	0.385	1
ZNF362	Del_4q35.1	0.385	1
8p-Amp	Del_15q13.1	0.385	1
Amp_10p15.1	Amp_17q23.1	0.385	1
FOXA1	18q-Del	0.386	1
HRNR	14q-Del	0.386	1
HRNR	Amp_19q12	0.386	1
HRNR	Del_21q11.2	0.386	1
SPEN	1q-Amp	0.386	1
TCP11	Del_6p25.3	0.386	1
17q-Amp	16q-Del	0.386	1
5p-Amp	Amp_19q13.42	0.386	1
8p-Amp	Del_11q23.3	0.386	1
17q-Del	Amp_12p13.33	0.386	1
Amp_14q21.1	Amp_19p13.12	0.386	1
Del_9q21.11	Del_21q11.2	0.386	1
C17orf95	Del_11q25	0.387	1
PTEN	Del_11q23.3	0.387	1
SMAD2	Amp_17q23.1	0.387	1
TFE3	Amp_17q23.1	0.387	1
TPP2	5q-Del	0.387	1
USP36	5q-Del	0.387	1
5p-Amp	Amp_4q13.3	0.387	1
ACTL6B	Del_19q13.32	0.388	1
KCNN3	1p-Del	0.388	1
SMAD2	Del_20p13	0.388	1
SMAD4	Del_20p13	0.388	1
TFE3	9q-Del	0.388	1
TFE3	Del_20p13	0.388	1
USP36	16q-Del	0.388	1
VCPIP1	1p-Del	0.388	1
1q-Del	Del_19q13.32	0.388	1
Amp_3q26.32	Del_17p12	0.388	1
EYS	Amp_15q26.3	0.389	1
FRMPD2	8q-Amp	0.389	1
IRS4	Amp_19p13.12	0.389	1
KDM6A	Del_3p21.31	0.389	1
KDM6A	Del_9p21.3	0.389	1
MAP2K4	Amp_17q23.1	0.389	1
MAP3K1	18p-Del	0.389	1
RBMX	8q-Amp	0.389	1
4p-Del	Amp_14q21.1	0.389	1
GATA3	MAP2K4	0.39	1
HRNR	KDM6A	0.39	1
MAP3K1	20q-Amp	0.39	1
17q-Amp	Amp_3q26.32	0.39	1
20q-Amp	4q-Del	0.39	1
Amp_4q13.3	Del_9q34.2	0.39	1
IRS4	Amp_20q13.2	0.391	1
MAP3K1	Del_8p23.2	0.391	1
8p-Amp	Amp_19p13.12	0.391	1
18p-Del	Amp_19p13.12	0.391	1
Amp_11p13	Del_1p22.1	0.391	1
FOXA1	Del_8p23.2	0.392	1
TGS1	20q-Amp	0.392	1
Amp_15q26.3	Del_12q23.1	0.392	1
CASZ1	16p-Del	0.393	1
ERBB2	Amp_12q15	0.393	1
ERBB2	Del_7q36.1	0.393	1
FOXA1	8p-Amp	0.393	1
FOXA1	18p-Del	0.393	1
FRMPD2	16p-Del	0.393	1
FRMPD2	Amp_10p15.1	0.393	1
RUFY1	Del_16q24.3	0.393	1
SMAD4	22q-Del	0.393	1
TFE3	22q-Del	0.393	1
TGS1	17q-Amp	0.393	1
Amp_6p23	Amp_12q15	0.393	1
GPRIN2	Del_19p13.3	0.394	1
PIK3CA	ZNF362	0.394	1
20p-Amp	15q-Del	0.394	1
Amp_1q44	Del_9q34.2	0.394	1
ARID1A	Del_12q24.31	0.395	1
CDC42EP1	6q-Del	0.395	1
HRNR	Del_9q21.11	0.395	1
NCOR1	Del_11q25	0.395	1
TAF1L	8q-Amp	0.395	1
5p-Amp	Del_9p23	0.395	1
Amp_4q13.3	Del_17q21.31	0.395	1
ARID1A	Del_13q14.2	0.396	1
TAF1L	Amp_17q23.1	0.396	1
TBL1XR1	Del_3p21.31	0.396	1
8p-Amp	Amp_3q26.32	0.396	1
MAP2K4	Del_7q36.1	0.397	1
RUNX1	TAF1L	0.397	1
Amp_13q34	Del_11q25	0.397	1
AQP12A	11p-Del	0.398	1
AQP12A	Del_9q34.2	0.398	1
FGFR2	Del_22q13.32	0.398	1
GPRIN2	Del_22q13.32	0.398	1
ICOSLG	11p-Del	0.398	1
PIK3R1	18q-Del	0.398	1
RBMX	Amp_1p22.3	0.398	1
RUFY1	11p-Del	0.398	1
RUNX1	11q-Del	0.398	1
TPP2	Del_11q23.3	0.398	1
1q-Amp	Del_12q24.31	0.398	1
20q-Amp	Del_14q24.1	0.398	1
Amp_19q13.42	Del_6q15	0.398	1
KDM6A	Del_5q21.3	0.399	1
NBPF9	18q-Del	0.399	1
NCDN	Del_14q24.1	0.399	1
PAX2	Del_14q24.1	0.399	1
PIK3R1	1q-Amp	0.399	1
ZBTB7C	Del_11p15.5	0.399	1
ZNF362	Del_11p15.5	0.399	1
ZNF362	Del_14q24.1	0.399	1
17q-Amp	Amp_11p13	0.399	1
5p-Amp	Amp_11p13	0.399	1
Amp_10p15.1	Del_7q36.1	0.399	1
Amp_15q26.3	Del_6q15	0.399	1
ACTL6B	Amp_8p11.23	0.4	1
APC	7q-Amp	0.4	1
CTCF	SPEN	0.4	1
ERBB2	14q-Del	0.4	1
FBXW7	MAP2K4	0.4	1
GPS2	Amp_8p11.23	0.4	1
KDM6A	MAP2K4	0.4	1
MAP2K4	ZMYM3	0.4	1
MLL3	Amp_20q13.2	0.4	1
RB1	17q-Del	0.4	1
SF3B1	7q-Amp	0.4	1
1q-Del	Amp_8p11.23	0.4	1
IL1RAP	Amp_13q34	0.401	1
TGS1	Del_8p23.2	0.401	1
8q-Amp	Amp_15q26.3	0.401	1
C17orf95	8p-Amp	0.402	1
EYS	Del_1p36.13	0.402	1
NBPF9	8p-Amp	0.402	1
NBPF9	18p-Del	0.402	1
PIK3R1	Del_6q15	0.402	1
RUFY1	Del_2q37.3	0.402	1
SMAD4	Amp_12q15	0.402	1
SMAD4	Del_7q36.1	0.402	1
TFE3	Del_7q36.1	0.402	1
ZFP36L2	Amp_12q15	0.402	1
ZFP36L2	Del_7q36.1	0.402	1
Amp_11q13.3	Amp_19q12	0.402	1
RBMX	Amp_3q26.32	0.403	1
TAF1L	Del_17p12	0.403	1
7q-Amp	Amp_3p25.1	0.403	1
7q-Amp	Del_7p22.3	0.403	1
Amp_1p22.3	Amp_10q22.3	0.403	1
Amp_3p25.1	Amp_8p11.23	0.403	1
APC	8p-Del	0.404	1
FGFR2	Amp_3p25.1	0.404	1
GPRIN2	Amp_3p25.1	0.404	1
HRNR	4q-Del	0.404	1
MYH9	8p-Del	0.404	1
MYH9	Del_11q25	0.404	1
SF3B1	8p-Del	0.404	1
7p-Amp	Del_11q13.1	0.404	1
HRNR	Amp_1q44	0.405	1
ZNF362	Del_19p13.3	0.405	1
5q-Del	Amp_8p11.23	0.405	1
Amp_19q12	Del_17q21.31	0.405	1
CDKN1B	Amp_1q44	0.406	1
MAP2K4	17q-Del	0.406	1
NF1	Del_11p15.5	0.406	1
TGS1	Del_4q35.1	0.406	1
18q-Del	Amp_13q34	0.406	1
Amp_8p11.23	Amp_12p13.33	0.406	1
FOXA1	Del_10q26.3	0.407	1
PIK3R1	PTEN	0.407	1
RUFY1	Amp_8p11.23	0.407	1
SMAD2	17q-Del	0.407	1
SMAD2	Del_21q11.2	0.407	1
TFE3	Del_21q11.2	0.407	1
TPP2	Amp_17q12	0.407	1
8q-Amp	Del_9p23	0.407	1
ARID1A	ERBB2	0.408	1
ERBB2	Del_9q21.11	0.408	1
KDM6A	Del_1p36.13	0.408	1
PTEN	20p-Amp	0.408	1
RB1	Del_9q21.11	0.408	1
ZMYM3	Del_1p36.13	0.408	1
C17orf95	9p-Del	0.409	1
MED23	4p-Del	0.409	1
MUC6	4p-Del	0.409	1
NBPF9	9p-Del	0.409	1
NBPF9	Del_10q26.3	0.409	1
USP36	Amp_15q26.3	0.409	1
8p-Del	Amp_10q22.3	0.409	1
Amp_14q21.1	Del_11p15.5	0.409	1
Amp_19q12	Del_17p12	0.409	1
TBL1XR1	Del_1p36.13	0.41	1
5q-Del	Amp_4q13.3	0.41	1
Amp_19p13.12	Del_10q26.3	0.41	1
FBXW7	20p-Amp	0.411	1
IRS4	7p-Amp	0.411	1
KDM6A	20p-Amp	0.411	1
NLGN3	7p-Amp	0.411	1
TFE3	Del_9q21.11	0.411	1
ZFP36L2	Del_9q21.11	0.411	1
20q-Amp	Amp_1q44	0.411	1
Amp_3p25.1	Amp_8p11.21	0.411	1
IL1RAP	5p-Amp	0.412	1
IL1RAP	Amp_6q21	0.412	1
KCNN3	Amp_6q21	0.412	1
RB1	Del_19p13.3	0.412	1
VCPIP1	5p-Amp	0.412	1
VCPIP1	Amp_6q21	0.412	1
CASZ1	Del_1p22.1	0.413	1
MUC6	Del_13q14.2	0.413	1
NBPF9	Del_10q23.31	0.413	1
PIK3CA	TFE3	0.413	1
6q-Del	Amp_3p25.1	0.413	1
Amp_8p11.23	Amp_10q22.3	0.413	1
MLL3	Amp_1q21.3	0.414	1
SPEN	7p-Amp	0.414	1
17q-Amp	Amp_1q21.3	0.414	1
7p-Amp	8p-Del	0.414	1
ACTL6B	Del_12q24.31	0.415	1
CDKN1B	Del_12q24.31	0.415	1
ERBB2	MAP3K1	0.415	1
IRS4	1q-Amp	0.415	1
PIK3R1	9p-Del	0.415	1
PTPN22	Del_12q23.1	0.415	1
PTPN22	Del_12q24.31	0.415	1
17q-Amp	Del_4p16.3	0.415	1
Amp_1p22.3	Del_11p15.5	0.415	1
MAP3K1	SMAD4	0.416	1
MAP3K1	ZFP36L2	0.416	1
MED23	16p-Del	0.416	1
SMAD2	4q-Del	0.416	1
SMAD4	4q-Del	0.416	1
TFE3	4q-Del	0.416	1
16p-Del	Amp_17q12	0.416	1
17q-Del	Amp_10p15.1	0.416	1
1p-Del	Amp_3p25.1	0.416	1
Amp_10p15.1	Del_21q11.2	0.416	1
Amp_14q21.1	Del_7p22.3	0.416	1
Amp_19q12	Del_18q23	0.416	1
7p-Amp	Del_9q21.11	0.417	1
Amp_8p11.21	Del_7q36.1	0.417	1
CASZ1	17q-Amp	0.418	1
FRMPD2	17q-Amp	0.418	1
RBMX	17q-Amp	0.418	1
RBMX	Del_5q11.2	0.418	1
20q-Amp	Del_16q24.3	0.418	1
Amp_10p15.1	Del_11q25	0.418	1
CDC42EP1	Amp_10p15.1	0.419	1
HRNR	Del_7p22.3	0.419	1
MAP2K4	Del_6q15	0.419	1
MLL3	17p-Del	0.419	1
MUC6	Del_16q24.3	0.419	1
NCDN	Del_9p23	0.419	1
PIK3R1	Del_16q24.3	0.419	1
PTPN22	Amp_8q24.21	0.419	1
ZNF362	Del_9p23	0.419	1
Amp_10p15.1	Amp_17q12	0.419	1
APC	MAP2K4	0.42	1
APC	Amp_8p11.21	0.42	1
CDH1	6q-Del	0.42	1
CTCF	Del_22q13.32	0.42	1
NF1	RB1	0.42	1
RB1	TBX3	0.42	1
20q-Amp	Amp_10p15.1	0.42	1
Amp_1p22.3	Del_12q23.1	0.42	1
Amp_1q21.3	Amp_11q14.1	0.42	1
Amp_10p15.1	Amp_11q14.1	0.42	1
ACTL6B	1p-Del	0.421	1
EYS	9q-Del	0.421	1
GPS2	1p-Del	0.421	1
GPS2	Amp_14q21.1	0.421	1
MED23	17p-Del	0.421	1
PTPN22	Amp_14q21.1	0.421	1
8q-Amp	16q-Del	0.421	1
CDC42EP1	16q-Del	0.422	1
HRNR	Del_12p13.1	0.422	1
ICOSLG	Del_13q14.2	0.422	1
RUFY1	Del_13q14.2	0.422	1
TPP2	Amp_1q21.3	0.422	1
16p-Amp	Amp_6q21	0.422	1
Del_6q15	Del_12q23.1	0.422	1
NBPF9	Amp_1p22.3	0.423	1
NF1	Del_17p12	0.423	1
PTEN	Del_13q14.2	0.423	1
20p-Amp	Del_6q27	0.423	1
Del_11q13.1	Del_19q13.32	0.423	1
IL1RAP	Del_6q27	0.424	1
KCNN3	5q-Del	0.424	1
NF1	1p-Del	0.424	1
NF1	Amp_14q21.1	0.424	1
TBL1XR1	Del_6q27	0.424	1
8p-Amp	Del_1p22.1	0.424	1
ARID1A	Amp_13q34	0.425	1
CDKN1B	17p-Del	0.425	1
EYS	16p-Amp	0.425	1
PIK3CA	RBMX	0.425	1
TFE3	Del_12p13.1	0.425	1
ZFP36L2	8p-Del	0.425	1
C17orf95	Amp_3q26.32	0.426	1
CDC42EP1	Amp_3q26.32	0.426	1
FRMPD2	Amp_10q22.3	0.426	1
ICOSLG	Amp_6p23	0.426	1
NBPF9	Amp_3q26.32	0.426	1
RUFY1	Amp_6p23	0.426	1
TBL1XR1	Del_11q25	0.426	1
TCP11	Amp_6p23	0.426	1
Amp_20q13.2	Del_1p22.1	0.426	1
ICOSLG	17p-Del	0.427	1
KRAS	17p-Del	0.427	1
SF3B1	11q-Del	0.427	1
22q-Del	Amp_1p22.3	0.427	1
APC	PIK3CA	0.428	1
CTCF	PIK3CA	0.428	1
GPRIN2	Del_17q21.31	0.428	1
IRS4	Del_17q21.31	0.428	1
KDM6A	PTEN	0.428	1
KDM6A	6q-Del	0.428	1
1q-Amp	Amp_20q13.2	0.428	1
17p-Del	Amp_4q13.3	0.428	1
Amp_1q21.3	Del_6q15	0.428	1
Amp_8p11.21	Del_9q34.2	0.428	1
Amp_10q22.3	Del_18q23	0.428	1
FGFR2	Amp_11q13.3	0.429	1
IRS4	Amp_11q13.3	0.429	1
MAP2K4	Amp_1p22.3	0.429	1
TPP2	9q-Del	0.429	1
USP36	9q-Del	0.429	1
USP36	Del_20p13	0.429	1
ZFP36L1	9q-Del	0.429	1
PAX2	Del_18q23	0.43	1
TGS1	Del_11p15.5	0.43	1
TGS1	Del_14q24.1	0.43	1
ZBTB7C	Del_18q23	0.43	1
ZFP36L2	Amp_20q13.2	0.43	1
5p-Amp	Del_6p25.3	0.43	1
6q-Del	Del_20p13	0.43	1
Amp_19q13.42	Del_6p25.3	0.43	1
MYB	Amp_3p25.1	0.431	1
TGS1	Amp_3p25.1	0.431	1
TGS1	Del_7p22.3	0.431	1
7p-Amp	1p-Del	0.431	1
22q-Del	Amp_19q12	0.431	1
RB1	RUNX1	0.432	1
7q-Amp	Amp_11q14.1	0.432	1
8p-Amp	Del_7p22.3	0.432	1
Amp_3p25.1	Del_12p13.1	0.432	1
Amp_19q13.42	Del_9p21.3	0.432	1
Del_7p22.3	Del_12p13.1	0.432	1
FRMPD2	20q-Amp	0.433	1
MUC6	NCOR1	0.433	1
NBPF9	Del_1p22.1	0.433	1
NCOR1	PIK3R1	0.433	1
NLGN3	Del_18q23	0.433	1
RBMX	20q-Amp	0.433	1
RUNX1	Del_12q23.1	0.433	1
RUNX1	Del_12q24.31	0.433	1
5p-Amp	Del_18q23	0.433	1
Amp_19q13.42	Del_18q23	0.433	1
ACTL6B	Amp_13q34	0.434	1
FOXA1	Amp_1p22.3	0.434	1
GPS2	Amp_13q34	0.434	1
RUFY1	Del_5q21.3	0.434	1
ZFP36L2	Del_6p25.3	0.434	1
17q-Amp	16p-Del	0.434	1
20p-Amp	11p-Del	0.434	1
1q-Amp	Amp_14q21.1	0.435	1
4q-Del	Amp_17q12	0.435	1
PIK3R1	Amp_1p22.3	0.436	1
SMAD4	Del_22q13.32	0.436	1
TFE3	Amp_8p11.21	0.436	1
22q-Del	Amp_8q24.21	0.436	1
Amp_6p23	Del_18q23	0.436	1
CBFB	CDH1	0.437	1
EYS	Del_4q35.1	0.437	1
NCOR1	Amp_15q26.3	0.437	1
9p-Del	Amp_13q34	0.437	1
Amp_6p23	Del_11p15.5	0.437	1
Amp_6p23	Del_14q24.1	0.437	1
CASZ1	16p-Amp	0.438	1
ZMYM3	16p-Del	0.438	1
C17orf95	CDH1	0.439	1
CBFB	Del_1p36.13	0.439	1
FBXW7	8p-Amp	0.439	1
MLL3	Del_6p25.3	0.439	1
20p-Amp	Del_4q35.1	0.439	1
22q-Del	Amp_1q44	0.439	1
Amp_1q21.3	Del_4q35.1	0.439	1
ERBB2	Del_9p23	0.44	1
IL1RAP	Del_16q24.3	0.441	1
9q-Del	Del_12q24.31	0.441	1
Del_10q23.31	Del_16q24.3	0.441	1
AQP12A	Del_11q13.1	0.442	1
ICOSLG	20p-Amp	0.442	1
MUC6	17q-Amp	0.442	1
NCOR1	Del_4q35.1	0.442	1
NCOR1	Del_15q13.1	0.442	1
PIK3R1	Amp_4q13.3	0.442	1
RUFY1	20p-Amp	0.442	1
SP3	20p-Amp	0.442	1
TCP11	20p-Amp	0.442	1
VCPIP1	Del_6q15	0.442	1
5p-Amp	Del_4q35.1	0.442	1
18q-Del	Amp_19q13.42	0.442	1
ERBB2	Del_6p25.3	0.443	1
7p-Amp	18q-Del	0.443	1
CBFB	15q-Del	0.444	1
EYS	Del_7q36.1	0.444	1
MYH9	Del_11q13.1	0.444	1
SF3B1	20p-Amp	0.444	1
SPEN	11p-Del	0.444	1
TGS1	8p-Del	0.444	1
7q-Amp	Del_9q34.2	0.444	1
Amp_1p22.3	Amp_12p13.33	0.444	1
FGFR2	Del_12q23.1	0.445	1
FGFR2	Del_12q24.31	0.445	1
GPRIN2	Del_12q24.31	0.445	1
NLGN3	Del_12q24.31	0.445	1
TPP2	Amp_12q15	0.445	1
TPP2	Del_7q36.1	0.445	1
USP36	Amp_12q15	0.445	1
ZFP36L1	Amp_12q15	0.445	1
1q-Amp	Del_7q36.1	0.445	1
Amp_12q15	Del_1p22.1	0.445	1
ACTL6B	5p-Amp	0.446	1
ACTL6B	Amp_6q21	0.446	1
ARID1A	Del_22q13.32	0.446	1
CDC42EP1	Amp_11q14.1	0.446	1
FOXA1	22q-Del	0.446	1
FRMPD2	Amp_1q21.3	0.446	1
GPS2	Amp_6q21	0.446	1
NBPF9	20q-Amp	0.446	1
1q-Amp	8q-Amp	0.446	1
1q-Del	Amp_6q21	0.446	1
5q-Del	Del_6q15	0.446	1
ICOSLG	8q-Amp	0.447	1
KCNN3	Amp_15q26.3	0.447	1
SMAD2	11p-Del	0.447	1
TCP11	8q-Amp	0.447	1
TFE3	Del_9q34.2	0.447	1
20p-Amp	Amp_1p22.3	0.447	1
16p-Del	Amp_10q22.3	0.447	1
6q-Del	Amp_11q14.1	0.447	1
Amp_13q34	Del_10q23.31	0.447	1
Del_7q36.1	Del_19p13.3	0.447	1
FRMPD2	Del_4q35.1	0.448	1
FRMPD2	Del_15q13.1	0.448	1
RBMX	Del_4q35.1	0.448	1
16p-Amp	Amp_1p22.3	0.448	1
Amp_8p11.21	Del_1p22.1	0.448	1
Amp_15q26.3	Amp_19q12	0.448	1
NBPF9	16p-Amp	0.449	1
NF1	17p-Del	0.449	1
PTEN	Del_1p36.13	0.449	1
TBX3	17p-Del	0.449	1
TPP2	Del_17p12	0.449	1
Amp_1q44	Del_19q13.32	0.449	1
Amp_4q13.3	Del_6q15	0.449	1
Amp_6p23	Del_11q25	0.449	1
ACTL6B	8q-Amp	0.45	1
APC	PTEN	0.45	1
MED23	Amp_10q22.3	0.45	1
MUC6	8q-Amp	0.45	1
TPP2	Amp_19q12	0.45	1
USP36	Amp_19q12	0.45	1
ZFP36L1	17q-Del	0.45	1
Amp_1q44	Del_11q13.1	0.45	1
ACTL6B	Del_9p21.3	0.451	1
CTCF	Del_1p36.13	0.451	1
NF1	Amp_1q44	0.451	1
NF1	Del_6q15	0.451	1
EYS	17q-Del	0.452	1
FGFR2	Amp_14q21.1	0.452	1
SMAD4	Del_2q37.3	0.452	1
TFE3	Del_2q37.3	0.452	1
ZFP36L2	Del_2q37.3	0.452	1
1q-Del	Amp_11p13	0.452	1
ICOSLG	6q-Del	0.453	1
NF1	Del_9p23	0.453	1
SP3	6q-Del	0.453	1
SPEN	16q-Del	0.453	1
20p-Amp	Del_3p21.31	0.453	1
7p-Amp	18p-Del	0.453	1
8p-Amp	9q-Del	0.453	1
8p-Amp	Amp_6q21	0.453	1
18p-Del	Amp_19q13.42	0.453	1
TPP2	Del_9q21.11	0.454	1
USP36	Amp_12p13.33	0.454	1
USP36	Del_9q21.11	0.454	1
ZFP36L1	Amp_8q24.21	0.454	1
7p-Amp	Del_14q24.1	0.454	1
7q-Amp	Del_4q35.1	0.454	1
7q-Amp	Del_15q13.1	0.454	1
6q-Del	Del_5q21.3	0.454	1
C17orf95	Del_4q35.1	0.455	1
C17orf95	Del_15q13.1	0.455	1
CDC42EP1	Del_4q35.1	0.455	1
CDC42EP1	Del_15q13.1	0.455	1
HRNR	Amp_8p11.21	0.455	1
MAP3K1	Del_12p13.1	0.455	1
NBPF9	Del_4q35.1	0.455	1
NBPF9	Del_15q13.1	0.455	1
RB1	SPEN	0.455	1
ZMYM3	Amp_8q24.21	0.455	1
Amp_13q34	Del_6q27	0.455	1
ARID1A	CBFB	0.456	1
FBXW7	Del_10q23.31	0.456	1
MAP2K4	Del_11q25	0.456	1
TFE3	Del_8p23.2	0.456	1
ZFP36L2	Del_8p23.2	0.456	1
7p-Amp	Amp_13q34	0.456	1
17q-Del	Amp_1q21.3	0.456	1
ICOSLG	18q-Del	0.457	1
MED23	Del_4p16.3	0.457	1
PIK3R1	Del_5q11.2	0.457	1
TCP11	18q-Del	0.457	1
1p-Del	Del_20p13	0.457	1
9q-Del	Amp_14q21.1	0.457	1
Amp_6p23	Del_12q23.1	0.457	1
Amp_6p23	Del_12q24.31	0.457	1
APC	Amp_11q13.3	0.458	1
CTCF	Amp_11q13.3	0.458	1
FOXA1	17p-Del	0.458	1
FRMPD2	Del_7p22.3	0.458	1
HRNR	Amp_11q14.1	0.458	1
TPP2	Amp_17q23.1	0.458	1
APC	16p-Del	0.459	1
CTCF	16p-Del	0.459	1
HRNR	Del_17p12	0.459	1
TP53	TPP2	0.459	1
TP53	USP36	0.459	1
1q-Amp	Amp_19q13.42	0.459	1
20p-Amp	17q-Del	0.459	1
17q-Del	Del_11q13.1	0.459	1
Del_11q13.1	Del_21q11.2	0.459	1
ARID1A	6q-Del	0.46	1
GATA3	PTEN	0.46	1
PIK3CA	Del_7q36.1	0.46	1
PTEN	4p-Del	0.46	1
18q-Del	Amp_11p13	0.46	1
ICOSLG	18p-Del	0.461	1
MAP2K4	Del_6p25.3	0.461	1
RUFY1	8p-Amp	0.461	1
SPEN	11q-Del	0.461	1
TCP11	18p-Del	0.461	1
TGS1	Del_9p23	0.461	1
4q-Del	Amp_1p22.3	0.461	1
CDH1	PIK3R1	0.462	1
CTCF	6q-Del	0.462	1
FBXW7	13q-Del	0.462	1
NCOR1	Amp_4q13.3	0.462	1
SMAD4	Amp_11q13.3	0.462	1
TFE3	Amp_11q13.3	0.462	1
NF1	20p-Amp	0.463	1
TAF1L	Del_11q25	0.463	1
18p-Del	Amp_8p11.21	0.463	1
ERBB2	Del_9q34.2	0.464	1
GATA3	Amp_19q13.42	0.464	1
RB1	11p-Del	0.464	1
4p-Del	Amp_19q13.42	0.464	1
5q-Del	Amp_1q21.3	0.464	1
AQP12A	GATA3	0.465	1
AQP12A	4p-Del	0.465	1
GATA3	TCP11	0.465	1
GPRIN2	Amp_13q34	0.465	1
IRS4	Amp_13q34	0.465	1
KDM6A	17q-Amp	0.465	1
PTEN	14q-Del	0.465	1
RBMX	7p-Amp	0.465	1
SP3	4p-Del	0.465	1
TCP11	4p-Del	0.465	1
5p-Amp	Del_9q34.2	0.465	1
11p-Del	Amp_6q21	0.465	1
Amp_1q21.3	Del_11q23.3	0.465	1
Amp_3p25.1	Del_16q24.3	0.465	1
ACTL6B	Del_1p36.13	0.466	1
HRNR	RB1	0.466	1
HRNR	11p-Del	0.466	1
HRNR	Del_9q34.2	0.466	1
17q-Amp	Del_4q35.1	0.466	1
8p-Amp	9p-Del	0.466	1
ARID1A	18q-Del	0.467	1
KDM6A	Amp_10p15.1	0.467	1
PIK3R1	Amp_19p13.12	0.467	1
ZMYM3	Amp_10p15.1	0.467	1
CBFB	MLL3	0.468	1
EYS	Del_11p15.5	0.468	1
FOXA1	Del_20p13	0.468	1
ICOSLG	9p-Del	0.468	1
KCNN3	9q-Del	0.468	1
RUFY1	9p-Del	0.468	1
RUFY1	Del_10q26.3	0.468	1
TBL1XR1	Del_20p13	0.468	1
18q-Del	Del_5q21.3	0.468	1
PIK3CA	Del_12q23.1	0.469	1
TAF1L	11q-Del	0.469	1
USP36	Del_12p13.1	0.469	1
7q-Amp	Amp_11q13.3	0.469	1
Amp_12q15	Del_1p36.13	0.469	1
CTCF	Del_6q27	0.47	1
ICOSLG	Amp_1q21.3	0.47	1
IL1RAP	Amp_17q12	0.47	1
KRAS	Amp_1q21.3	0.47	1
MYH9	Del_6q27	0.47	1
SF3B1	Del_6q27	0.47	1
TCP11	Amp_1q21.3	0.47	1
Amp_6p23	Del_12p13.1	0.47	1
C17orf95	Del_14q24.1	0.471	1
CDH1	Del_11q25	0.471	1
NBPF9	Del_11p15.5	0.471	1
NBPF9	Del_14q24.1	0.471	1
TAF1L	Amp_8p11.21	0.471	1
22q-Del	Amp_1q21.3	0.471	1
Amp_8p11.21	Del_6p25.3	0.471	1
CDC42EP1	Del_17p12	0.472	1
NBPF9	Del_17p12	0.472	1
NCDN	Del_16q24.3	0.472	1
PAX2	11q-Del	0.472	1
PAX2	Del_16q24.3	0.472	1
PIK3R1	Amp_11q14.1	0.472	1
RAB42	11q-Del	0.472	1
SP3	Del_10q23.31	0.472	1
ZBTB7C	Del_16q24.3	0.472	1
16p-Amp	Amp_10q22.3	0.472	1
7p-Amp	13q-Del	0.472	1
13q-Del	Amp_14q21.1	0.472	1
Amp_10q22.3	Del_11q25	0.472	1
FBXW7	Amp_1p22.3	0.473	1
IL1RAP	16q-Del	0.473	1
PIK3CA	Amp_3p25.1	0.473	1
PIK3CA	Del_7p22.3	0.473	1
ZMYM3	Amp_1p22.3	0.473	1
ZMYM3	Amp_10q22.3	0.473	1
20p-Amp	Amp_1q21.3	0.473	1
Amp_1q21.3	Del_11q13.1	0.473	1
MAP3K1	Amp_15q26.3	0.474	1
TAF1L	Del_3p21.31	0.474	1
5p-Amp	9p-Del	0.474	1
HRNR	Del_2q37.3	0.475	1
NCDN	Del_3p21.31	0.475	1
NCDN	Del_9p21.3	0.475	1
PTEN	Amp_12p13.33	0.475	1
PTEN	Del_9q21.11	0.475	1
ZNF362	Del_9p21.3	0.475	1
4q-Del	Amp_20q13.2	0.475	1
TP53	18q-Del	0.476	1
Amp_4q13.3	Del_5q21.3	0.476	1
NBPF9	Del_19p13.3	0.477	1
ZFP36L2	Amp_6p23	0.477	1
FGFR2	Amp_6q21	0.478	1
IRS4	Amp_19q13.42	0.478	1
MED23	16p-Amp	0.478	1
APC	GATA3	0.479	1
AQP12A	Amp_10p15.1	0.479	1
GATA3	SF3B1	0.479	1
ICOSLG	Amp_10p15.1	0.479	1
KDM6A	17p-Del	0.479	1
RUFY1	Amp_10p15.1	0.479	1
SPEN	1p-Del	0.479	1
TCP11	Amp_10p15.1	0.479	1
7q-Amp	1p-Del	0.479	1
11q-Del	Amp_3p25.1	0.479	1
16q-Del	Del_19p13.3	0.479	1
6q-Del	Amp_12q15	0.479	1
FOXA1	20q-Amp	0.48	1
MAP2K4	1q-Amp	0.48	1
TAF1L	16p-Del	0.48	1
C17orf95	TP53	0.481	1
CBFB	RUNX1	0.481	1
GPS2	Del_6q27	0.481	1
HRNR	Del_4q35.1	0.481	1
HRNR	Del_15q13.1	0.481	1
MYH9	Del_11q23.3	0.481	1
NBPF9	TP53	0.481	1
1q-Del	Del_6q27	0.481	1
ARID1A	GATA3	0.482	1
CASZ1	Del_19p13.3	0.482	1
GATA3	Del_19q13.32	0.482	1
GPS2	Amp_15q26.3	0.482	1
PTPN22	Amp_15q26.3	0.482	1
11p-Del	Amp_11p13	0.482	1
KRAS	Amp_1p22.3	0.483	1
MAP3K1	Del_6p25.3	0.483	1
MED23	Amp_3p25.1	0.483	1
MUC6	Del_7p22.3	0.483	1
PTEN	Amp_3p25.1	0.483	1
PTEN	Del_7p22.3	0.483	1
TCP11	Amp_1p22.3	0.483	1
Amp_1q21.3	Amp_17q23.1	0.483	1
FOXA1	TBX3	0.484	1
IL1RAP	Amp_12q15	0.484	1
TBL1XR1	Del_7q36.1	0.484	1
TBL1XR1	Del_11q23.3	0.484	1
VCPIP1	Amp_12q15	0.484	1
8p-Amp	Del_11q25	0.484	1
APC	Del_10q26.3	0.485	1
CTCF	Del_10q26.3	0.485	1
FBXW7	Del_17p12	0.485	1
MAP3K1	PTEN	0.485	1
NCDN	Del_1p36.13	0.485	1
PAX2	Del_1p36.13	0.485	1
Amp_17q23.1	Del_5q11.2	0.485	1
HRNR	Del_12q23.1	0.486	1
SMAD4	Del_5q21.3	0.486	1
ZFP36L2	Del_5q21.3	0.486	1
8q-Amp	Del_7q36.1	0.486	1
AQP12A	Amp_3q26.32	0.487	1
GPRIN2	Amp_1q21.3	0.487	1
MYH9	17q-Amp	0.487	1
RUFY1	Amp_3q26.32	0.487	1
TCP11	Amp_3q26.32	0.487	1
Amp_1p22.3	Del_22q13.32	0.487	1
KRAS	Amp_1q44	0.488	1
MED23	Del_4q35.1	0.488	1
RUNX1	Del_11q13.1	0.488	1
SP3	Amp_1q44	0.488	1
Amp_11q14.1	Del_12q24.31	0.488	1
CBFB	Del_6q15	0.489	1
CDH1	Del_11q23.3	0.489	1
EYS	7q-Amp	0.489	1
KDM6A	Del_1p22.1	0.489	1
RUFY1	Del_11q25	0.489	1
TBL1XR1	14q-Del	0.489	1
VCPIP1	17q-Del	0.489	1
Amp_1p22.3	Del_7p22.3	0.489	1
Amp_19q12	Del_12q23.1	0.489	1
Del_6p25.3	Del_19q13.32	0.489	1
Del_12q24.31	Del_21q11.2	0.489	1
FBXW7	Amp_19p13.12	0.49	1
MAP3K1	Del_11q13.1	0.49	1
ZMYM3	Amp_19p13.12	0.49	1
17q-Amp	Amp_10q22.3	0.49	1
8q-Amp	Del_10q23.31	0.49	1
CTCF	Del_10q23.31	0.491	1
FGFR2	5q-Del	0.491	1
IRS4	5q-Del	0.491	1
MLL3	Amp_11q14.1	0.491	1
PIK3R1	7p-Amp	0.491	1
TGS1	Amp_11q13.3	0.491	1
1p-Del	Amp_17q23.1	0.491	1
5q-Del	Amp_3p25.1	0.491	1
Amp_17q23.1	Del_14q24.1	0.491	1
APC	Del_8p23.2	0.492	1
NCOR1	Amp_1q21.3	0.492	1
GATA3	Amp_11q14.1	0.493	1
MLL3	Amp_14q21.1	0.493	1
NBPF9	Del_9p23	0.493	1
TPP2	11p-Del	0.493	1
TPP2	Del_9q34.2	0.493	1
USP36	11p-Del	0.493	1
USP36	Del_9q34.2	0.493	1
ZFP36L1	Del_9q34.2	0.493	1
20q-Amp	4p-Del	0.493	1
7q-Amp	Del_1p36.13	0.493	1
1p-Del	Amp_12q15	0.493	1
AQP12A	Del_1p22.1	0.494	1
CTCF	Del_6q15	0.494	1
FBXW7	Del_5q11.2	0.494	1
ICOSLG	Del_1p22.1	0.494	1
IRS4	17p-Del	0.494	1
KCNN3	Del_9q21.11	0.494	1
NLGN3	17p-Del	0.494	1
RUFY1	Del_1p22.1	0.494	1
SMAD4	20p-Amp	0.494	1
SP3	Del_1p22.1	0.494	1
VCPIP1	Del_9q21.11	0.494	1
ZBTB7C	Del_6q27	0.495	1
ZNF362	Del_6q27	0.495	1
Amp_8p11.21	Del_11p15.5	0.495	1
CTCF	Amp_10q22.3	0.496	1
GATA3	Del_17p12	0.496	1
MLL3	Amp_11q13.3	0.496	1
Amp_8p11.23	Amp_19q12	0.496	1
AQP12A	Del_4p16.3	0.497	1
ERBB2	22q-Del	0.497	1
RUFY1	Del_5q11.2	0.497	1
Amp_6q21	Del_19q13.32	0.497	1
Del_16q24.3	Del_21q11.2	0.497	1
PIK3R1	Del_19q13.32	0.498	1
ARID1A	Amp_15q26.3	0.499	1
FGFR2	11q-Del	0.499	1
ZFP36L1	8p-Del	0.499	1
20p-Amp	Del_1p36.13	0.499	1
20p-Amp	Del_12q24.31	0.499	1
ACTL6B	Del_6q15	0.5	1
CDH1	FBXW7	0.5	1
CDH1	ZMYM3	0.5	1
FBXW7	Del_16q24.3	0.5	1
KCNN3	MAP3K1	0.5	1
PTPN22	Del_6q15	0.5	1
SPEN	Amp_13q34	0.5	1
TBL1XR1	4q-Del	0.5	1
TP53	ZMYM3	0.5	1
20p-Amp	Del_4p16.3	0.5	1
7q-Amp	Amp_13q34	0.5	1
1q-Del	Del_6q15	0.5	1
CDH1	KRAS	0.501	1
CDH1	SP3	0.501	1
CDH1	TCP11	0.501	1
NF1	18p-Del	0.501	1
RBMX	8p-Del	0.501	1
CASZ1	Del_12q23.1	0.502	1
CASZ1	Del_12q24.31	0.502	1
CDC42EP1	Del_17q21.31	0.502	1
FRMPD2	Del_12q23.1	0.502	1
MYH9	Amp_10p15.1	0.502	1
NBPF9	Del_17q21.31	0.502	1
NCOR1	Amp_19p13.12	0.502	1
PTEN	Amp_1p22.3	0.502	1
RBMX	Del_12q24.31	0.502	1
APC	Amp_8p11.23	0.503	1
FGFR2	Del_9p21.3	0.503	1
MUC6	Amp_17q23.1	0.503	1
PIK3CA	Del_1p22.1	0.503	1
PIK3R1	Amp_17q23.1	0.503	1
RUNX1	5q-Del	0.503	1
SF3B1	Amp_8p11.23	0.503	1
7q-Amp	Amp_6p23	0.503	1
8p-Amp	Del_7q36.1	0.503	1
Amp_19q13.42	Del_6q27	0.503	1
GPS2	Del_11q25	0.504	1
RBMX	16q-Del	0.504	1
8p-Del	Amp_13q34	0.504	1
C17orf95	Del_18q23	0.505	1
CBFB	SPEN	0.505	1
CDC42EP1	Del_18q23	0.505	1
GPS2	Del_20p13	0.505	1
MLL3	8p-Del	0.505	1
NBPF9	Del_18q23	0.505	1
PTPN22	9q-Del	0.505	1
ZFP36L1	Amp_20q13.2	0.505	1
8q-Amp	Del_4q35.1	0.505	1
TAF1L	8p-Amp	0.506	1
TFE3	6q-Del	0.506	1
ZFP36L2	6q-Del	0.506	1
9q-Del	Amp_19q12	0.506	1
Amp_1q44	Del_19p13.3	0.506	1
CTCF	13q-Del	0.507	1
GATA3	16p-Amp	0.507	1
GPRIN2	PIK3CA	0.507	1
HRNR	Amp_11q13.3	0.507	1
IRS4	PIK3CA	0.507	1
KDM6A	Amp_3p25.1	0.507	1
PAX2	Del_6q15	0.507	1
RB1	1q-Amp	0.507	1
Amp_12p13.33	Del_11q23.3	0.507	1
ERBB2	PTEN	0.508	1
FRMPD2	Amp_20q13.2	0.508	1
ICOSLG	20q-Amp	0.508	1
ICOSLG	Amp_11q14.1	0.508	1
PTEN	RB1	0.508	1
RUFY1	20q-Amp	0.508	1
RUFY1	Amp_11q14.1	0.508	1
SP3	20q-Amp	0.508	1
SP3	Amp_11q14.1	0.508	1
TAF1L	17q-Amp	0.508	1
TAF1L	Amp_4q13.3	0.508	1
TCP11	20q-Amp	0.508	1
TGS1	Amp_6q21	0.508	1
20q-Amp	17q-Del	0.508	1
5q-Del	Amp_17q23.1	0.508	1
EYS	Del_9p23	0.509	1
RBMX	1p-Del	0.509	1
RBMX	Amp_14q21.1	0.509	1
SMAD2	Del_13q14.2	0.509	1
ZFP36L2	Del_13q14.2	0.509	1
1q-Amp	Del_9q21.11	0.509	1
FBXW7	8q-Amp	0.51	1
FGFR2	Amp_1q44	0.51	1
KDM6A	20q-Amp	0.51	1
KDM6A	8q-Amp	0.51	1
KDM6A	Amp_11q14.1	0.51	1
PIK3CA	18p-Del	0.51	1
ZMYM3	Amp_11q14.1	0.51	1
7p-Amp	Amp_17q12	0.51	1
8q-Amp	Del_12p13.1	0.51	1
ACTL6B	13q-Del	0.511	1
AQP12A	16p-Amp	0.511	1
ERBB2	Amp_6p23	0.511	1
RB1	Amp_6p23	0.511	1
RUNX1	6q-Del	0.511	1
SP3	16p-Amp	0.511	1
TPP2	Amp_8p11.21	0.511	1
ZFP36L1	Del_22q13.32	0.511	1
8q-Amp	8p-Del	0.511	1
13q-Del	1q-Del	0.511	1
EYS	MAP2K4	0.512	1
GATA3	TAF1L	0.512	1
Amp_11p13	Del_14q24.1	0.512	1
GATA3	11p-Del	0.513	1
MUC6	Del_11q25	0.513	1
MUC6	Del_14q24.1	0.513	1
MYH9	Amp_19p13.12	0.513	1
PIK3R1	Del_11q25	0.513	1
SMAD4	Del_16q24.3	0.513	1
ZFP36L2	Del_16q24.3	0.513	1
4p-Del	Amp_1q21.3	0.513	1
PIK3CA	ZFP36L1	0.514	1
TP53	Amp_12q15	0.514	1
Amp_1q44	Del_4q35.1	0.514	1
Amp_17q12	Del_5q11.2	0.514	1
MYB	Amp_11p13	0.515	1
PAX2	13q-Del	0.515	1
RAB42	13q-Del	0.515	1
ZMYM3	7p-Amp	0.515	1
ZNF362	13q-Del	0.515	1
20p-Amp	Del_17p12	0.515	1
7p-Amp	Del_11q25	0.515	1
Amp_17q23.1	Del_7q36.1	0.515	1
1p-Del	Amp_14q21.1	0.516	1
Amp_17q12	Del_4q35.1	0.516	1
CBFB	HRNR	0.517	1
NCOR1	Amp_20q13.2	0.517	1
TP53	7p-Amp	0.517	1
5p-Amp	Amp_1p22.3	0.517	1
1p-Del	Amp_12p13.33	0.517	1
Amp_13q34	Del_9p23	0.517	1
AQP12A	Del_4q35.1	0.518	1
ARID1A	Amp_1p22.3	0.518	1
EYS	Del_9q34.2	0.518	1
GATA3	TFE3	0.518	1
GATA3	ZFP36L2	0.518	1
HRNR	Del_14q24.1	0.518	1
ICOSLG	Del_4q35.1	0.518	1
ICOSLG	Del_15q13.1	0.518	1
PIK3CA	Del_17q21.31	0.518	1
RUFY1	Del_15q13.1	0.518	1
SMAD2	4p-Del	0.518	1
SMAD4	4p-Del	0.518	1
TAF1L	9p-Del	0.518	1
TCP11	Del_15q13.1	0.518	1
TFE3	4p-Del	0.518	1
TP53	11p-Del	0.518	1
16p-Amp	Amp_14q21.1	0.518	1
11q-Del	Amp_1p22.3	0.518	1
9q-Del	Amp_19q13.42	0.518	1
CASZ1	Del_17q21.31	0.519	1
ERBB2	16p-Del	0.519	1
FGFR2	Del_1p36.13	0.519	1
IL1RAP	Del_6p25.3	0.519	1
TBL1XR1	Del_6p25.3	0.519	1
GPRIN2	8q-Amp	0.52	1
IRS4	8q-Amp	0.52	1
NF1	Amp_15q26.3	0.52	1
5p-Amp	Del_13q14.2	0.52	1
7q-Amp	Del_5q21.3	0.52	1
8p-Amp	17q-Del	0.52	1
18p-Del	Amp_19q12	0.52	1
ACTL6B	Del_7q36.1	0.521	1
FOXA1	SPEN	0.521	1
SPEN	Amp_19q13.42	0.521	1
NCOR1	Amp_19q12	0.522	1
SMAD2	Del_10q26.3	0.522	1
SMAD4	Del_10q26.3	0.522	1
TFE3	9p-Del	0.522	1
TFE3	Del_10q26.3	0.522	1
ZFP36L2	9p-Del	0.522	1
16p-Amp	Del_10q26.3	0.522	1
Amp_1q21.3	Del_9q34.2	0.522	1
Del_11q13.1	Del_12p13.1	0.522	1
CASZ1	Amp_13q34	0.523	1
FOXA1	Del_22q13.32	0.523	1
MAP3K1	Del_9q34.2	0.523	1
PIK3R1	Del_19p13.3	0.523	1
ZMYM3	Del_19q13.32	0.523	1
Amp_1q21.3	Del_14q24.1	0.523	1
Amp_20q13.2	Del_7q36.1	0.523	1
IL1RAP	Amp_17q23.1	0.524	1
TBL1XR1	1q-Amp	0.524	1
USP36	Amp_6p23	0.524	1
Amp_4q13.3	Del_19p13.3	0.524	1
CDC42EP1	PIK3CA	0.525	1
NBPF9	PIK3CA	0.525	1
RUNX1	Del_22q13.32	0.525	1
ACTL6B	Del_21q11.2	0.526	1
CDKN1B	17q-Del	0.526	1
CDKN1B	Amp_19q12	0.526	1
FBXW7	Del_15q13.1	0.526	1
GPS2	Del_21q11.2	0.526	1
PTPN22	17q-Del	0.526	1
PTPN22	Del_21q11.2	0.526	1
RUNX1	18p-Del	0.526	1
SMAD2	Del_10q23.31	0.526	1
TFE3	Del_10q23.31	0.526	1
ZFP36L2	Del_10q23.31	0.526	1
ZMYM3	Del_4q35.1	0.526	1
1q-Amp	13q-Del	0.526	1
Del_7p22.3	Del_18q23	0.526	1
ARID1A	TBX3	0.527	1
CTCF	Del_13q14.2	0.527	1
MAP2K4	8q-Amp	0.527	1
MLL3	9p-Del	0.527	1
NCDN	Amp_17q12	0.527	1
PAX2	Amp_17q12	0.527	1
ZNF362	Amp_17q12	0.527	1
16p-Amp	13q-Del	0.527	1
Amp_3q26.32	Del_1p22.1	0.527	1
Amp_11q14.1	Amp_15q26.3	0.527	1
MED23	Del_12q23.1	0.528	1
NCOR1	Amp_3p25.1	0.528	1
PIK3R1	Del_12q23.1	0.528	1
RUFY1	16q-Del	0.528	1
RUNX1	16q-Del	0.528	1
TCP11	16q-Del	0.528	1
4q-Del	Amp_14q21.1	0.528	1
ACTL6B	Amp_17q12	0.529	1
Amp_19p13.12	Del_11q23.3	0.529	1
Del_5q11.2	Del_6q15	0.529	1
MLL3	17q-Amp	0.53	1
SF3B1	Amp_3p25.1	0.53	1
SF3B1	Amp_17q12	0.53	1
SF3B1	Del_5q11.2	0.53	1
6q-Del	Del_12q24.31	0.53	1
FOXA1	Del_12p13.1	0.532	1
HRNR	Del_19p13.3	0.532	1
PTEN	13q-Del	0.532	1
PTPN22	Del_9q21.11	0.532	1
20q-Amp	Del_22q13.32	0.532	1
1q-Del	Del_9q21.11	0.532	1
Amp_8p11.23	Amp_17q12	0.532	1
Amp_10p15.1	Del_17q21.31	0.532	1
CTCF	1q-Amp	0.533	1
MAP3K1	9q-Del	0.533	1
SF3B1	1q-Amp	0.533	1
TFE3	Amp_10p15.1	0.533	1
TPP2	Del_5q21.3	0.533	1
ZFP36L1	Del_5q21.3	0.533	1
ZFP36L2	Amp_10p15.1	0.533	1
8q-Amp	Del_9q34.2	0.533	1
16p-Del	Amp_3q26.32	0.533	1
GATA3	RUNX1	0.534	1
IL1RAP	11p-Del	0.534	1
TAF1L	Amp_19p13.12	0.534	1
TBL1XR1	11p-Del	0.534	1
VCPIP1	Del_9q34.2	0.534	1
Amp_12q15	Del_7q36.1	0.534	1
AQP12A	Del_14q24.1	0.535	1
ARID1A	9q-Del	0.535	1
CDH1	SF3B1	0.535	1
IL1RAP	Amp_1q21.3	0.535	1
PIK3CA	Amp_3q26.32	0.535	1
RUFY1	Del_11p15.5	0.535	1
RUFY1	Del_14q24.1	0.535	1
SMAD4	8q-Amp	0.535	1
SP3	Del_11p15.5	0.535	1
TBL1XR1	Amp_1q21.3	0.535	1
TFE3	8q-Amp	0.535	1
MED23	1p-Del	0.536	1
MED23	Amp_14q21.1	0.536	1
MUC6	1p-Del	0.536	1
PIK3R1	Amp_14q21.1	0.536	1
SPEN	20p-Amp	0.536	1
SPEN	Del_11q25	0.536	1
TAF1L	Amp_10p15.1	0.536	1
20q-Amp	Del_17q21.31	0.536	1
17p-Del	Amp_8p11.21	0.536	1
CASZ1	5p-Amp	0.537	1
CDKN1B	4q-Del	0.537	1
ERBB2	Del_11q13.1	0.537	1
GPS2	MAP3K1	0.537	1
MAP3K1	PTPN22	0.537	1
MAP3K1	1q-Del	0.537	1
MAP3K1	Del_2q37.3	0.537	1
NF1	Amp_10p15.1	0.537	1
RUFY1	Del_11q23.3	0.537	1
SMAD4	Amp_1p22.3	0.537	1
TFE3	Amp_1p22.3	0.537	1
ZBTB7C	Amp_1q21.3	0.537	1
ZFP36L2	Amp_1p22.3	0.537	1
17p-Del	Amp_12q15	0.537	1
Amp_13q34	Del_11q23.3	0.537	1
APC	7p-Amp	0.538	1
ERBB2	Amp_1q21.3	0.538	1
FGFR2	15q-Del	0.538	1
GPRIN2	9q-Del	0.538	1
IRS4	Del_20p13	0.538	1
NCOR1	RB1	0.538	1
NLGN3	15q-Del	0.538	1
RB1	Amp_1q21.3	0.538	1
VCPIP1	Del_17p12	0.538	1
ZFP36L1	Amp_11q13.3	0.538	1
Amp_15q26.3	Del_7p22.3	0.538	1
HRNR	5p-Amp	0.539	1
IL1RAP	Del_2q37.3	0.539	1
VCPIP1	Del_2q37.3	0.539	1
ARID1A	RUNX1	0.54	1
CDH1	Amp_1p22.3	0.54	1
7q-Amp	Del_9p23	0.54	1
8p-Amp	Amp_4q13.3	0.54	1
17q-Del	Amp_4q13.3	0.54	1
Amp_4q13.3	Amp_19q12	0.54	1
Amp_4q13.3	Del_21q11.2	0.54	1
AQP12A	Del_19p13.3	0.541	1
ARID1A	Del_17p12	0.541	1
ICOSLG	Del_19p13.3	0.541	1
NF1	TBX3	0.541	1
PIK3CA	TBX3	0.541	1
SMAD4	Amp_3q26.32	0.541	1
TPP2	20p-Amp	0.541	1
TPP2	Del_11q13.1	0.541	1
USP36	20p-Amp	0.541	1
ZFP36L1	Del_11q13.1	0.541	1
7q-Amp	5q-Del	0.541	1
NCOR1	4q-Del	0.542	1
PIK3CA	Amp_11q13.3	0.542	1
TAF1L	Del_11q23.3	0.542	1
17q-Amp	Amp_3p25.1	0.542	1
FOXA1	13q-Del	0.543	1
FRMPD2	Amp_11p13	0.543	1
MAP2K4	16q-Del	0.543	1
RBMX	Amp_11p13	0.543	1
1p-Del	Amp_13q34	0.543	1
Amp_17q12	Del_9q21.11	0.543	1
TBX3	Amp_1p22.3	0.544	1
17p-Del	Amp_14q21.1	0.545	1
CTCF	Del_19q13.32	0.546	1
SF3B1	20q-Amp	0.546	1
ACTL6B	Del_12p13.1	0.547	1
FOXA1	Del_6p25.3	0.547	1
Amp_10q22.3	Amp_12q15	0.547	1
Amp_10q22.3	Del_7q36.1	0.547	1
Amp_19p13.12	Del_11q25	0.547	1
ERBB2	Amp_4q13.3	0.548	1
RB1	11q-Del	0.548	1
RUNX1	Del_10q23.31	0.548	1
SMAD2	Del_1p22.1	0.548	1
17q-Amp	4p-Del	0.548	1
18q-Del	Amp_8p11.21	0.548	1
Amp_6q21	Del_8p23.2	0.548	1
Amp_12q15	Amp_19q12	0.548	1
Amp_19q12	Del_7q36.1	0.548	1
IL1RAP	TP53	0.549	1
PTEN	Amp_8p11.23	0.549	1
6q-Del	Amp_14q21.1	0.549	1
9q-Del	Amp_1q44	0.549	1
FRMPD2	5q-Del	0.55	1
7p-Amp	Del_18q23	0.55	1
8p-Amp	Del_12q23.1	0.55	1
Amp_4q13.3	Del_9q21.11	0.55	1
KDM6A	Del_11p15.5	0.551	1
TAF1L	13q-Del	0.551	1
7q-Amp	Del_6q15	0.551	1
CDKN1B	16q-Del	0.552	1
PTPN22	16q-Del	0.552	1
SMAD4	Del_5q11.2	0.552	1
TAF1L	Del_7p22.3	0.552	1
TGS1	Del_9p21.3	0.552	1
ZFP36L2	Del_5q11.2	0.552	1
11p-Del	Del_12p13.1	0.552	1
18q-Del	Amp_10q22.3	0.552	1
C17orf95	Del_3p21.31	0.553	1
FBXW7	Del_12q24.31	0.553	1
KDM6A	Del_12q24.31	0.553	1
NBPF9	Del_9p21.3	0.553	1
PTEN	Del_12q24.31	0.553	1
ZMYM3	Del_12q23.1	0.553	1
IRS4	Del_6q15	0.554	1
NF1	RUNX1	0.554	1
EYS	16p-Del	0.555	1
FGFR2	MLL3	0.555	1
FGFR2	Amp_12q15	0.555	1
FGFR2	Del_7q36.1	0.555	1
GPRIN2	MLL3	0.555	1
GPRIN2	Amp_12q15	0.555	1
GPRIN2	Del_7q36.1	0.555	1
IRS4	MLL3	0.555	1
MLL3	Amp_6q21	0.555	1
MLL3	Amp_19q13.42	0.555	1
MUC6	8p-Del	0.555	1
NLGN3	Del_7q36.1	0.555	1
5p-Amp	Del_12q23.1	0.555	1
5p-Amp	Del_12q24.31	0.555	1
16q-Del	Del_21q11.2	0.555	1
Amp_19p13.12	Del_11q13.1	0.555	1
CDH1	SMAD4	0.556	1
IL1RAP	Amp_1q44	0.556	1
KCNN3	Amp_1q44	0.556	1
MAP2K4	Amp_19q13.42	0.556	1
Amp_1q44	Amp_13q34	0.556	1
Amp_10q22.3	Del_7p22.3	0.556	1
PTPN22	Del_6p25.3	0.557	1
RUFY1	Del_9p23	0.557	1
Amp_1q44	Del_4p16.3	0.557	1
PTEN	Amp_11q14.1	0.558	1
HRNR	5q-Del	0.559	1
HRNR	Del_11q13.1	0.559	1
7q-Amp	6q-Del	0.559	1
Amp_19q13.42	Del_9p23	0.559	1
ARID1A	Amp_12q15	0.56	1
CASZ1	Del_16q24.3	0.56	1
IRS4	Del_8p23.2	0.56	1
NCDN	Amp_8q24.21	0.56	1
PAX2	Amp_8q24.21	0.56	1
RAB42	Amp_8q24.21	0.56	1
TAF1L	7p-Amp	0.56	1
17q-Amp	4q-Del	0.56	1
1q-Amp	1p-Del	0.56	1
5p-Amp	8p-Del	0.56	1
8p-Amp	Amp_15q26.3	0.56	1
18p-Del	Amp_15q26.3	0.56	1
FGFR2	Amp_19q12	0.561	1
GPRIN2	Del_21q11.2	0.561	1
IRS4	17q-Del	0.561	1
IRS4	Amp_19q12	0.561	1
KDM6A	Amp_14q21.1	0.561	1
NLGN3	17q-Del	0.561	1
NLGN3	Del_21q11.2	0.561	1
ZMYM3	22q-Del	0.561	1
18p-Del	Amp_10q22.3	0.561	1
Amp_8p11.21	Del_3p21.31	0.561	1
Amp_12p13.33	Del_8p23.2	0.561	1
C17orf95	Del_8p23.2	0.562	1
CTCF	Del_15q13.1	0.562	1
GATA3	Del_3p21.31	0.562	1
MLL3	Amp_10p15.1	0.562	1
MUC6	Del_8p23.2	0.562	1
NCOR1	Del_17q21.31	0.562	1
PIK3R1	Amp_20q13.2	0.562	1
TPP2	8p-Amp	0.562	1
17q-Amp	Del_22q13.32	0.562	1
Amp_4q13.3	Amp_8p11.21	0.562	1
SMAD4	20q-Amp	0.563	1
TFE3	Amp_11q14.1	0.563	1
Amp_3q26.32	Del_11q25	0.563	1
CDC42EP1	Del_1p36.13	0.564	1
MUC6	5p-Amp	0.564	1
MUC6	Amp_6q21	0.564	1
MUC6	Amp_19q13.42	0.564	1
NCDN	Amp_17q23.1	0.564	1
PIK3R1	5p-Amp	0.564	1
PTEN	Amp_14q21.1	0.564	1
TAF1L	Del_4p16.3	0.564	1
ZBTB7C	Amp_17q23.1	0.564	1
17q-Amp	Del_9p23	0.564	1
16q-Del	4p-Del	0.565	1
ERBB2	Del_22q13.32	0.566	1
EYS	17p-Del	0.566	1
GATA3	TPP2	0.566	1
GATA3	USP36	0.566	1
GATA3	ZFP36L1	0.566	1
IL1RAP	Amp_6p23	0.566	1
NLGN3	Amp_12p13.33	0.566	1
SMAD2	16p-Amp	0.566	1
VCPIP1	8p-Del	0.566	1
ZFP36L1	4p-Del	0.566	1
ZFP36L2	16p-Amp	0.566	1
20p-Amp	Del_5q21.3	0.566	1
APC	8q-Amp	0.567	1
ICOSLG	Del_17q21.31	0.567	1
RUFY1	Del_17q21.31	0.567	1
SP3	Del_17q21.31	0.567	1
17q-Amp	Del_19q13.32	0.567	1
20q-Amp	22q-Del	0.567	1
7q-Amp	18q-Del	0.567	1
7q-Amp	Del_18q23	0.567	1
ARID1A	14q-Del	0.568	1
ARID1A	17q-Del	0.568	1
GATA3	6q-Del	0.568	1
NCDN	22q-Del	0.568	1
NF1	1q-Amp	0.568	1
RB1	8p-Amp	0.568	1
RB1	Amp_1q44	0.568	1
TAF1L	Del_19q13.32	0.568	1
4p-Del	6q-Del	0.568	1
Amp_10q22.3	Del_9q21.11	0.568	1
ICOSLG	1q-Amp	0.569	1
IL1RAP	Amp_8q24.21	0.569	1
TCP11	1q-Amp	0.569	1
5p-Amp	1p-Del	0.569	1
7p-Amp	Amp_10q22.3	0.569	1
7q-Amp	13q-Del	0.569	1
1p-Del	Amp_6q21	0.569	1
ICOSLG	Del_18q23	0.57	1
MLL3	Amp_11p13	0.57	1
PIK3R1	Del_22q13.32	0.57	1
TGS1	9q-Del	0.57	1
TGS1	Del_20p13	0.57	1
TPP2	9p-Del	0.57	1
ZFP36L1	9p-Del	0.57	1
ZFP36L1	Del_10q26.3	0.57	1
8p-Amp	Del_22q13.32	0.57	1
Amp_20q13.2	Del_4q35.1	0.57	1
FGFR2	4q-Del	0.571	1
NF1	Del_16q24.3	0.571	1
ACTL6B	Del_9q34.2	0.572	1
CBFB	16p-Del	0.572	1
GPS2	11p-Del	0.572	1
PTPN22	Del_9q34.2	0.572	1
11p-Del	1q-Del	0.572	1
13q-Del	Amp_6q21	0.572	1
Amp_1q21.3	Amp_19p13.12	0.572	1
ERBB2	Del_1p36.13	0.573	1
MAP2K4	Del_8p23.2	0.573	1
SMAD4	Del_4q35.1	0.573	1
SMAD4	Del_15q13.1	0.573	1
GATA3	RB1	0.574	1
RB1	Del_11q25	0.574	1
ZFP36L1	Del_10q23.31	0.574	1
7p-Amp	Amp_6p23	0.574	1
7q-Amp	17p-Del	0.574	1
Amp_1p22.3	Del_7q36.1	0.574	1
CASZ1	Amp_15q26.3	0.575	1
FBXW7	Amp_13q34	0.575	1
HRNR	Amp_8q24.21	0.575	1
IRS4	Del_11q25	0.575	1
KDM6A	Amp_13q34	0.575	1
MLL3	4q-Del	0.575	1
RBMX	Amp_15q26.3	0.575	1
ARID1A	Del_9q21.11	0.576	1
CBFB	Amp_8p11.23	0.576	1
RUNX1	9q-Del	0.576	1
8p-Amp	Del_4p16.3	0.576	1
CTCF	Del_12q24.31	0.577	1
PIK3R1	5q-Del	0.577	1
SF3B1	Del_12q23.1	0.577	1
SF3B1	Del_12q24.31	0.577	1
5p-Amp	16q-Del	0.577	1
8q-Amp	Amp_1q44	0.577	1
Amp_20q13.2	Del_12q24.31	0.577	1
FOXA1	PTEN	0.578	1
IL1RAP	Amp_8p11.21	0.578	1
KCNN3	Amp_8p11.21	0.578	1
VCPIP1	Amp_8p11.21	0.578	1
20p-Amp	Del_15q13.1	0.578	1
Del_4q35.1	Del_11q13.1	0.578	1
ARID1A	Del_1p36.13	0.579	1
MAP3K1	8p-Del	0.579	1
SMAD4	Del_11q25	0.579	1
SPEN	Amp_15q26.3	0.579	1
ZFP36L2	Del_11q25	0.579	1
TAF1L	20q-Amp	0.58	1
TAF1L	Del_13q14.2	0.58	1
1q-Amp	Amp_6q21	0.58	1
16q-Del	Amp_3p25.1	0.58	1
Amp_11q14.1	Del_15q13.1	0.58	1
AQP12A	Del_17p12	0.581	1
CASZ1	Del_17p12	0.581	1
ICOSLG	Del_17p12	0.581	1
KRAS	Del_17p12	0.581	1
MAP2K4	20p-Amp	0.581	1
MAP2K4	Del_6q27	0.581	1
NF1	Amp_12q15	0.581	1
PTEN	Del_4q35.1	0.581	1
TBX3	11q-Del	0.581	1
TBX3	Amp_12q15	0.581	1
4p-Del	Amp_1q44	0.581	1
FGFR2	Del_12p13.1	0.582	1
MLL3	Amp_19p13.12	0.582	1
TPP2	Amp_10p15.1	0.582	1
USP36	Amp_10p15.1	0.582	1
ZFP36L1	Amp_10p15.1	0.582	1
Amp_4q13.3	Del_11q25	0.582	1
FGFR2	Amp_17q12	0.583	1
GATA3	18q-Del	0.583	1
IRS4	Amp_17q12	0.583	1
Amp_17q12	Del_22q13.32	0.583	1
APC	1p-Del	0.584	1
CDH1	Del_1p22.1	0.584	1
CTCF	1p-Del	0.584	1
EYS	17q-Amp	0.584	1
MUC6	Del_11q23.3	0.584	1
MYB	Del_6q27	0.584	1
VCPIP1	Del_11q13.1	0.584	1
8p-Amp	Del_12p13.1	0.584	1
ACTL6B	Amp_17q23.1	0.585	1
MYB	8q-Amp	0.585	1
NCOR1	Amp_17q23.1	0.585	1
TGS1	8q-Amp	0.585	1
TPP2	Amp_1p22.3	0.585	1
USP36	Amp_1p22.3	0.585	1
5q-Del	Amp_12q15	0.585	1
Amp_3q26.32	Amp_12q15	0.585	1
ARID1A	Del_15q13.1	0.586	1
Amp_1q21.3	Amp_17q12	0.586	1
Amp_17q12	Del_9q34.2	0.586	1
NF1	Del_3p21.31	0.587	1
PIK3CA	TGS1	0.587	1
Amp_14q21.1	Del_11q25	0.587	1
APC	Del_11p15.5	0.588	1
CDC42EP1	Del_6q15	0.588	1
FOXA1	16p-Del	0.588	1
SF3B1	Del_14q24.1	0.588	1
Amp_1q21.3	Del_19p13.3	0.588	1
Amp_6q21	Del_9p21.3	0.588	1
FBXW7	Amp_6q21	0.589	1
KDM6A	Amp_6q21	0.589	1
TBX3	17q-Del	0.589	1
TBX3	Amp_17q23.1	0.589	1
TBX3	Amp_19q12	0.589	1
TP53	Amp_11q14.1	0.589	1
ZMYM3	5p-Amp	0.589	1
ZMYM3	Amp_6q21	0.589	1
ZMYM3	Amp_19q13.42	0.589	1
9p-Del	Amp_14q21.1	0.589	1
HRNR	18q-Del	0.59	1
ICOSLG	TP53	0.59	1
RUFY1	TP53	0.59	1
SPEN	9p-Del	0.59	1
TCP11	TP53	0.59	1
7q-Amp	9p-Del	0.59	1
7q-Amp	Del_10q26.3	0.59	1
1p-Del	8p-Del	0.59	1
ARID1A	17p-Del	0.591	1
CDKN1B	22q-Del	0.591	1
GPS2	22q-Del	0.591	1
PTPN22	22q-Del	0.591	1
ZFP36L2	Del_11p15.5	0.591	1
5p-Amp	4q-Del	0.591	1
4q-Del	Amp_19q13.42	0.591	1
ERBB2	Del_7p22.3	0.592	1
FOXA1	Del_17q21.31	0.592	1
GPRIN2	Del_6p25.3	0.592	1
HRNR	1q-Amp	0.592	1
MYB	14q-Del	0.592	1
NCDN	8p-Del	0.592	1
PIK3CA	Del_12q24.31	0.592	1
TGS1	14q-Del	0.592	1
TGS1	17q-Del	0.592	1
TGS1	Del_21q11.2	0.592	1
ZNF362	8p-Del	0.592	1
Amp_8p11.21	Del_4q35.1	0.592	1
Amp_10q22.3	Del_11q23.3	0.592	1
Amp_12q15	Del_5q21.3	0.592	1
ERBB2	Del_6q27	0.593	1
EYS	Del_11q13.1	0.593	1
NF1	20q-Amp	0.593	1
PIK3CA	RUNX1	0.593	1
TBX3	Amp_11q14.1	0.593	1
CASZ1	TP53	0.594	1
20p-Amp	Amp_3p25.1	0.594	1
8q-Amp	18q-Del	0.594	1
5q-Del	Amp_14q21.1	0.594	1
Amp_4q13.3	Del_18q23	0.594	1
Amp_11p13	Del_9q21.11	0.594	1
Amp_11q13.3	Del_4q35.1	0.594	1
C17orf95	13q-Del	0.595	1
CDC42EP1	13q-Del	0.595	1
NBPF9	13q-Del	0.595	1
TAF1L	1q-Amp	0.595	1
FBXW7	Amp_11p13	0.596	1
GATA3	18p-Del	0.596	1
GATA3	Del_12p13.1	0.596	1
KDM6A	Amp_11p13	0.596	1
NCDN	Amp_20q13.2	0.596	1
PTEN	Amp_8p11.21	0.596	1
SMAD2	Amp_1q21.3	0.596	1
TAF1L	Del_4q35.1	0.596	1
ZBTB7C	Amp_20q13.2	0.596	1
ZMYM3	Amp_11p13	0.596	1
ZNF362	Amp_20q13.2	0.596	1
4q-Del	Amp_1q44	0.596	1
9q-Del	Amp_1q21.3	0.596	1
Amp_1q21.3	Amp_19q13.42	0.596	1
FOXA1	Del_18q23	0.597	1
HRNR	Amp_15q26.3	0.597	1
IL1RAP	6q-Del	0.597	1
RBMX	Del_3p21.31	0.597	1
SMAD4	Del_19p13.3	0.597	1
TBL1XR1	6q-Del	0.597	1
TPP2	Del_1p22.1	0.597	1
VCPIP1	6q-Del	0.597	1
ZFP36L2	Del_19p13.3	0.597	1
Amp_1q21.3	Del_6p25.3	0.597	1
APC	Del_19p13.3	0.598	1
HRNR	8p-Amp	0.598	1
HRNR	18p-Del	0.598	1
MYH9	Del_19p13.3	0.598	1
TGS1	Del_9q21.11	0.598	1
7p-Amp	15q-Del	0.598	1
CASZ1	9q-Del	0.599	1
FRMPD2	9q-Del	0.599	1
NCOR1	Del_12q23.1	0.599	1
RBMX	9q-Del	0.599	1
SPEN	Amp_17q12	0.599	1
20q-Amp	Del_20p13	0.599	1
7q-Amp	Del_22q13.32	0.599	1
ARID1A	Del_12p13.1	0.6	1
HRNR	13q-Del	0.6	1
KDM6A	Del_17q21.31	0.6	1
MYH9	Amp_17q23.1	0.6	1
NCDN	Del_22q13.32	0.6	1
PAX2	Amp_8p11.21	0.6	1
SF3B1	Amp_17q23.1	0.6	1
ZNF362	Amp_8p11.21	0.6	1
ZNF362	Del_22q13.32	0.6	1
KCNN3	18q-Del	0.601	1
MLL3	RUNX1	0.601	1
TPP2	Del_5q11.2	0.601	1
ZFP36L1	Del_4p16.3	0.601	1
ZFP36L1	Del_5q11.2	0.601	1
16p-Amp	Del_1p36.13	0.601	1
EYS	8q-Amp	0.602	1
HRNR	Del_13q14.2	0.602	1
MAP3K1	Amp_12p13.33	0.602	1
SPEN	Amp_1q21.3	0.602	1
MAP3K1	TGS1	0.603	1
NCOR1	Del_5q11.2	0.603	1
PIK3R1	Amp_15q26.3	0.603	1
TGS1	4q-Del	0.603	1
TGS1	Del_6q15	0.603	1
CDH1	TPP2	0.604	1
CDH1	ZFP36L1	0.604	1
MAP2K4	TBX3	0.604	1
MED23	Amp_11q13.3	0.604	1
MUC6	Amp_11q13.3	0.604	1
RB1	Amp_1p22.3	0.604	1
TAF1L	Amp_1q44	0.604	1
ACTL6B	Amp_6p23	0.605	1
GATA3	HRNR	0.605	1
HRNR	RUNX1	0.605	1
HRNR	4p-Del	0.605	1
MAP3K1	TBX3	0.605	1
PTPN22	Amp_6p23	0.605	1
ZMYM3	8p-Del	0.605	1
1q-Del	Amp_6p23	0.605	1
Amp_3p25.1	Del_11q23.3	0.605	1
IL1RAP	Amp_11q13.3	0.606	1
4q-Del	Amp_11p13	0.606	1
FGFR2	11p-Del	0.607	1
FGFR2	Del_9q34.2	0.607	1
GATA3	Del_11q25	0.607	1
TAF1L	1p-Del	0.607	1
CTCF	22q-Del	0.608	1
SF3B1	22q-Del	0.608	1
1q-Amp	Amp_8p11.21	0.608	1
CDC42EP1	Del_16q24.3	0.609	1
GATA3	KCNN3	0.609	1
IL1RAP	4p-Del	0.609	1
RB1	Del_19q13.32	0.609	1
TBL1XR1	4p-Del	0.609	1
GATA3	Amp_19p13.12	0.61	1
NCOR1	1p-Del	0.61	1
RB1	Amp_3q26.32	0.61	1
RUNX1	14q-Del	0.61	1
Amp_15q26.3	Amp_17q12	0.611	1
TPP2	20q-Amp	0.612	1
USP36	20q-Amp	0.612	1
APC	Amp_19q13.42	0.613	1
CTCF	5p-Amp	0.613	1
CTCF	Amp_19q13.42	0.613	1
MAP2K4	18q-Del	0.613	1
MYH9	Amp_6q21	0.613	1
SF3B1	5p-Amp	0.613	1
SF3B1	Amp_19q13.42	0.613	1
TBL1XR1	Del_10q26.3	0.613	1
VCPIP1	Del_10q26.3	0.613	1
16p-Amp	18q-Del	0.613	1
Amp_1q44	Amp_19q12	0.613	1
Amp_8p11.21	Del_18q23	0.613	1
FRMPD2	Del_1p36.13	0.614	1
SMAD2	Amp_1q44	0.614	1
SPEN	9q-Del	0.614	1
TFE3	Amp_1q44	0.614	1
TFE3	Del_9p23	0.614	1
ZFP36L2	Del_9p23	0.614	1
5p-Amp	Del_12p13.1	0.614	1
7q-Amp	15q-Del	0.614	1
7q-Amp	9q-Del	0.614	1
Amp_19q13.42	Del_12p13.1	0.614	1
ARID1A	Del_6p25.3	0.615	1
GATA3	Amp_13q34	0.615	1
MAP2K4	Del_17q21.31	0.615	1
MLL3	Amp_3p25.1	0.615	1
TGS1	13q-Del	0.615	1
TPP2	16p-Amp	0.615	1
USP36	16p-Amp	0.615	1
ZFP36L1	16p-Amp	0.615	1
16p-Amp	16q-Del	0.615	1
Amp_12q15	Del_7p22.3	0.615	1
Amp_20q13.2	Del_5q21.3	0.615	1
CASZ1	Amp_12q15	0.616	1
FRMPD2	Amp_12q15	0.616	1
FRMPD2	Del_7q36.1	0.616	1
MLL3	RBMX	0.616	1
17q-Amp	Del_1p22.1	0.616	1
Amp_1q44	Amp_19p13.12	0.616	1
Amp_4q13.3	Del_1p22.1	0.616	1
CASZ1	17p-Del	0.617	1
RUFY1	11q-Del	0.617	1
RUNX1	Del_3p21.31	0.617	1
TBL1XR1	Del_10q23.31	0.617	1
VCPIP1	Del_10q23.31	0.617	1
1q-Amp	Del_14q24.1	0.617	1
CDKN1B	Del_17p12	0.618	1
PTPN22	Del_17p12	0.618	1
1p-Del	Amp_10p15.1	0.618	1
Amp_3q26.32	Amp_8p11.23	0.618	1
Amp_12q15	Del_4p16.3	0.618	1
CBFB	20p-Amp	0.619	1
NCDN	Amp_11q13.3	0.619	1
PAX2	Amp_11q13.3	0.619	1
SMAD2	16q-Del	0.619	1
SMAD4	16q-Del	0.619	1
SPEN	7q-Amp	0.619	1
ZNF362	Amp_11q13.3	0.619	1
6q-Del	Amp_19q13.42	0.619	1
AQP12A	Del_3p21.31	0.62	1
EYS	1q-Amp	0.62	1
EYS	11q-Del	0.62	1
ICOSLG	Del_9p21.3	0.62	1
MAP2K4	18p-Del	0.62	1
RUFY1	Del_9p21.3	0.62	1
TCP11	Del_3p21.31	0.62	1
TCP11	Del_9p21.3	0.62	1
TGS1	Amp_8q24.21	0.62	1
7p-Amp	Del_13q14.2	0.62	1
KDM6A	Amp_8p11.21	0.621	1
MAP2K4	Del_18q23	0.621	1
NF1	Del_12p13.1	0.621	1
TAF1L	Amp_8q24.21	0.621	1
ZMYM3	Amp_8p11.21	0.621	1
Amp_11q13.3	Del_12p13.1	0.621	1
CASZ1	14q-Del	0.622	1
CASZ1	Amp_19q12	0.622	1
CASZ1	Del_21q11.2	0.622	1
FRMPD2	Amp_19q12	0.622	1
FRMPD2	Del_21q11.2	0.622	1
MLL3	TP53	0.622	1
RBMX	Del_21q11.2	0.622	1
SF3B1	Del_9p23	0.622	1
TAF1L	Del_14q24.1	0.622	1
TP53	Del_7q36.1	0.622	1
TPP2	Del_4q35.1	0.622	1
TPP2	Del_15q13.1	0.622	1
USP36	Del_4q35.1	0.622	1
20p-Amp	5q-Del	0.622	1
5p-Amp	16p-Del	0.622	1
7p-Amp	Del_7p22.3	0.622	1
7q-Amp	Del_8p23.2	0.622	1
Amp_17q12	Del_15q13.1	0.622	1
ACTL6B	20p-Amp	0.623	1
ACTL6B	Del_11q13.1	0.623	1
CDKN1B	20p-Amp	0.623	1
GATA3	Del_19p13.3	0.623	1
GPS2	Del_11q13.1	0.623	1
TFE3	Del_17q21.31	0.623	1
ZFP36L2	Del_17q21.31	0.623	1
20p-Amp	1q-Del	0.623	1
1q-Del	Del_11q13.1	0.623	1
FGFR2	16q-Del	0.624	1
GPRIN2	16q-Del	0.624	1
PIK3CA	PTEN	0.624	1
TGS1	Del_6p25.3	0.624	1
20q-Amp	5q-Del	0.624	1
RUNX1	16p-Amp	0.625	1
VCPIP1	Amp_10p15.1	0.625	1
ZFP36L2	Amp_8q24.21	0.625	1
CTCF	5q-Del	0.626	1
GATA3	13q-Del	0.626	1
RUNX1	4q-Del	0.626	1
RUNX1	Del_16q24.3	0.626	1
CASZ1	Amp_12p13.33	0.627	1
CASZ1	Del_9q21.11	0.627	1
FOXA1	Amp_10q22.3	0.627	1
FRMPD2	Amp_12p13.33	0.627	1
MED23	Del_20p13	0.627	1
MUC6	15q-Del	0.627	1
PIK3R1	15q-Del	0.627	1
PTPN22	8p-Del	0.627	1
RBMX	Del_9q21.11	0.627	1
ZFP36L2	Del_18q23	0.627	1
17q-Amp	Del_9q34.2	0.627	1
11p-Del	Amp_4q13.3	0.627	1
Amp_1p22.3	Amp_14q21.1	0.627	1
Amp_19p13.12	Del_10q23.31	0.627	1
PIK3CA	Del_12p13.1	0.628	1
ZFP36L2	Del_11q23.3	0.628	1
ZMYM3	Amp_15q26.3	0.628	1
Amp_10q22.3	Del_12q23.1	0.628	1
EYS	Amp_3p25.1	0.629	1
FGFR2	Del_16q24.3	0.629	1
KCNN3	Amp_1p22.3	0.629	1
TBL1XR1	Amp_1p22.3	0.629	1
8p-Amp	22q-Del	0.629	1
15q-Del	Amp_8p11.23	0.629	1
ACTL6B	TP53	0.63	1
TP53	1q-Del	0.63	1
20p-Amp	14q-Del	0.63	1
7p-Amp	Amp_12q15	0.63	1
18q-Del	Del_7p22.3	0.63	1
ARID1A	Amp_20q13.2	0.631	1
CTCF	Del_11q25	0.631	1
HRNR	SPEN	0.631	1
SP3	Del_1p36.13	0.631	1
8p-Del	Amp_10p15.1	0.632	1
Amp_1p22.3	Del_11q25	0.632	1
CASZ1	MAP3K1	0.633	1
CDKN1B	Amp_20q13.2	0.633	1
FBXW7	Del_8p23.2	0.633	1
HRNR	15q-Del	0.633	1
HRNR	9q-Del	0.633	1
IL1RAP	Amp_3q26.32	0.633	1
MAP3K1	RBMX	0.633	1
TGS1	Amp_17q12	0.633	1
VCPIP1	Amp_3q26.32	0.633	1
ZMYM3	Del_8p23.2	0.633	1
7p-Amp	17p-Del	0.633	1
1q-Del	Amp_20q13.2	0.633	1
ARID1A	16p-Del	0.634	1
EYS	8p-Del	0.634	1
NCOR1	16p-Amp	0.634	1
Amp_10p15.1	Del_1p22.1	0.634	1
ACTL6B	6q-Del	0.635	1
GPS2	6q-Del	0.635	1
HRNR	Amp_10p15.1	0.635	1
PIK3CA	TCP11	0.635	1
RUNX1	22q-Del	0.635	1
TAF1L	5p-Amp	0.635	1
TAF1L	Amp_6q21	0.635	1
1q-Del	6q-Del	0.635	1
CTCF	Del_17q21.31	0.636	1
FGFR2	Del_11q23.3	0.636	1
IRS4	Del_11q23.3	0.636	1
NF1	Del_6p25.3	0.636	1
6q-Del	Amp_11p13	0.636	1
PTEN	TBX3	0.637	1
SPEN	Del_11q23.3	0.637	1
Amp_10q22.3	Del_1p22.1	0.637	1
ARID1A	Del_9q34.2	0.638	1
CBFB	6q-Del	0.638	1
EYS	7p-Amp	0.638	1
RUNX1	Del_15q13.1	0.638	1
16p-Amp	Del_5q11.2	0.638	1
CDKN1B	Del_22q13.32	0.639	1
GPRIN2	Amp_17q23.1	0.639	1
GPS2	Del_22q13.32	0.639	1
IRS4	Amp_17q23.1	0.639	1
MAP2K4	Del_13q14.2	0.639	1
MYB	11p-Del	0.639	1
MYB	Del_9q34.2	0.639	1
PTEN	Del_17p12	0.639	1
PTPN22	Amp_8p11.21	0.639	1
PTPN22	Del_22q13.32	0.639	1
TGS1	Del_9q34.2	0.639	1
8p-Amp	Amp_3p25.1	0.639	1
1q-Del	Amp_8p11.21	0.639	1
Amp_10q22.3	Amp_14q21.1	0.639	1
CDKN1B	18q-Del	0.64	1
ERBB2	Del_12q23.1	0.64	1
ERBB2	Del_12q24.31	0.64	1
FGFR2	Amp_6p23	0.64	1
GPS2	18q-Del	0.64	1
IL1RAP	Del_1p22.1	0.64	1
MLL3	7q-Amp	0.64	1
RB1	Del_12q24.31	0.64	1
SPEN	Del_1p22.1	0.64	1
TPP2	Del_11p15.5	0.64	1
VCPIP1	Del_1p22.1	0.64	1
7q-Amp	Amp_12q15	0.64	1
Amp_1q44	Amp_10q22.3	0.64	1
RUNX1	Del_12p13.1	0.641	1
ZNF362	Amp_8p11.23	0.641	1
Amp_1q44	Del_17p12	0.641	1
Amp_8p11.23	Del_3p21.31	0.641	1
SP3	Del_6q27	0.642	1
TAF1L	Amp_11p13	0.642	1
PIK3CA	7p-Amp	0.643	1
ACTL6B	8p-Amp	0.644	1
CASZ1	Del_12p13.1	0.644	1
CDKN1B	8p-Amp	0.644	1
CDKN1B	18p-Del	0.644	1
GPS2	18p-Del	0.644	1
IL1RAP	Del_4p16.3	0.644	1
KCNN3	Del_4p16.3	0.644	1
MED23	MLL3	0.644	1
MED23	Amp_8p11.23	0.644	1
PTEN	Del_11q13.1	0.644	1
TBL1XR1	Del_4p16.3	0.644	1
ZMYM3	Del_11q23.3	0.644	1
11p-Del	Amp_10q22.3	0.644	1
Amp_10q22.3	Amp_17q23.1	0.644	1
CDH1	14q-Del	0.645	1
NBPF9	Amp_17q23.1	0.645	1
ZMYM3	Amp_1q44	0.645	1
FGFR2	22q-Del	0.646	1
GPRIN2	22q-Del	0.646	1
MLL3	Del_19q13.32	0.646	1
NLGN3	22q-Del	0.646	1
17q-Amp	Amp_13q34	0.646	1
1q-Amp	Del_13q14.2	0.646	1
Amp_1q44	Amp_8p11.21	0.646	1
Del_7q36.1	Del_19q13.32	0.646	1
USP36	Del_19p13.3	0.647	1
ZFP36L1	Del_19p13.3	0.647	1
7p-Amp	Del_19q13.32	0.647	1
7q-Amp	Del_5q11.2	0.647	1
5q-Del	Amp_19q13.42	0.647	1
ACTL6B	GATA3	0.648	1
CDH1	TBL1XR1	0.648	1
CDH1	VCPIP1	0.648	1
CDKN1B	GATA3	0.648	1
CDKN1B	4p-Del	0.648	1
GATA3	GPS2	0.648	1
GATA3	PTPN22	0.648	1
GATA3	1q-Del	0.648	1
SPEN	Amp_19q12	0.648	1
FGFR2	Del_5q21.3	0.649	1
GATA3	5p-Amp	0.649	1
IRS4	Del_5q21.3	0.649	1
MED23	17q-Del	0.649	1
MED23	Del_21q11.2	0.649	1
MUC6	17q-Del	0.649	1
NLGN3	Del_5q21.3	0.649	1
PIK3R1	Amp_19q12	0.649	1
PIK3R1	Del_21q11.2	0.649	1
TAF1L	5q-Del	0.649	1
16q-Del	Amp_15q26.3	0.649	1
C17orf95	22q-Del	0.65	1
MAP2K4	15q-Del	0.65	1
MLL3	Del_9p23	0.65	1
20q-Amp	Del_5q21.3	0.65	1
Amp_10q22.3	Amp_11q13.3	0.65	1
IL1RAP	Del_8p23.2	0.651	1
PTEN	RUNX1	0.651	1
TAF1L	22q-Del	0.651	1
ACTL6B	9p-Del	0.652	1
CBFB	11q-Del	0.652	1
CTCF	Amp_15q26.3	0.652	1
GPS2	9p-Del	0.652	1
GPS2	Del_10q26.3	0.652	1
KDM6A	15q-Del	0.652	1
MYH9	Amp_15q26.3	0.652	1
PAX2	Del_13q14.2	0.652	1
ZNF362	Del_13q14.2	0.652	1
5q-Del	6q-Del	0.652	1
Amp_1q21.3	Del_2q37.3	0.652	1
ARID1A	PIK3CA	0.653	1
RB1	Del_11q23.3	0.653	1
ERBB2	Amp_17q12	0.654	1
HRNR	8q-Amp	0.654	1
Amp_6q21	Del_6q27	0.654	1
Amp_11q13.3	Del_12q24.31	0.654	1
AQP12A	Del_6q15	0.655	1
ICOSLG	Del_6q15	0.655	1
IL1RAP	Amp_11q14.1	0.655	1
KCNN3	Amp_11q14.1	0.655	1
PIK3R1	Del_9q21.11	0.655	1
SP3	Del_6q15	0.655	1
VCPIP1	Amp_11q14.1	0.655	1
8q-Amp	Del_9q21.11	0.655	1
Amp_14q21.1	Del_1p22.1	0.655	1
ACTL6B	Del_10q23.31	0.656	1
CDKN1B	Del_10q23.31	0.656	1
GPS2	Del_10q23.31	0.656	1
MAP2K4	Amp_20q13.2	0.656	1
PTPN22	Del_10q23.31	0.656	1
SPEN	Del_9q21.11	0.656	1
TAF1L	Del_9p23	0.656	1
ZBTB7C	17p-Del	0.656	1
7q-Amp	Del_9q21.11	0.656	1
RUNX1	Del_6p25.3	0.657	1
TBX3	Del_19p13.3	0.657	1
TPP2	Del_11q25	0.657	1
ZFP36L1	Del_11q25	0.657	1
8p-Amp	Del_9q34.2	0.657	1
ERBB2	Del_15q13.1	0.658	1
GPRIN2	Del_11q13.1	0.658	1
HRNR	Amp_1q21.3	0.658	1
IRS4	Del_11q13.1	0.658	1
NLGN3	20p-Amp	0.658	1
NLGN3	Del_11q13.1	0.658	1
6q-Del	Del_19q13.32	0.658	1
Amp_13q34	Amp_20q13.2	0.658	1
APC	Amp_20q13.2	0.659	1
CASZ1	PIK3CA	0.659	1
MAP3K1	20p-Amp	0.659	1
NF1	11p-Del	0.659	1
NF1	Del_9q34.2	0.659	1
SF3B1	Amp_20q13.2	0.659	1
TBL1XR1	16p-Amp	0.659	1
VCPIP1	16p-Amp	0.659	1
20p-Amp	4q-Del	0.659	1
8p-Amp	Del_11q13.1	0.659	1
5q-Del	Amp_17q12	0.659	1
9p-Del	Amp_19q13.42	0.659	1
Amp_19q13.42	Del_10q26.3	0.659	1
EYS	Amp_1p22.3	0.66	1
MAP3K1	PIK3R1	0.66	1
MAP3K1	7p-Amp	0.66	1
PIK3CA	8p-Del	0.66	1
RBMX	13q-Del	0.66	1
VCPIP1	17p-Del	0.66	1
16p-Amp	Del_7q36.1	0.66	1
RUNX1	16p-Del	0.661	1
RUNX1	Del_13q14.2	0.661	1
AQP12A	13q-Del	0.662	1
NCOR1	Amp_11p13	0.662	1
SP3	13q-Del	0.662	1
1q-Amp	Del_1p22.1	0.662	1
FOXA1	Amp_3p25.1	0.663	1
TPP2	Del_9p23	0.663	1
ZFP36L1	Del_9p23	0.663	1
8q-Amp	9p-Del	0.663	1
ACTL6B	Amp_10p15.1	0.664	1
ARID1A	Amp_4q13.3	0.664	1
CDKN1B	Amp_10p15.1	0.664	1
MAP3K1	7q-Amp	0.664	1
PTEN	Amp_15q26.3	0.664	1
6q-Del	Amp_19q12	0.664	1
Amp_17q23.1	Amp_19q12	0.664	1
PTEN	16q-Del	0.665	1
TP53	Del_1p36.13	0.665	1
ACTL6B	Amp_11q13.3	0.666	1
GATA3	Del_15q13.1	0.666	1
VCPIP1	Del_4q35.1	0.666	1
MAP2K4	Del_22q13.32	0.667	1
NF1	Amp_20q13.2	0.667	1
PTEN	6q-Del	0.667	1
SF3B1	Amp_8p11.21	0.667	1
SF3B1	Del_22q13.32	0.667	1
SPEN	20q-Amp	0.667	1
17q-Amp	5p-Amp	0.667	1
ACTL6B	Amp_1p22.3	0.668	1
RBMX	Amp_1q21.3	0.668	1
8q-Amp	Del_9p21.3	0.668	1
Amp_10q22.3	Amp_11q14.1	0.668	1
CASZ1	11p-Del	0.669	1
CASZ1	Del_9q34.2	0.669	1
FBXW7	Amp_12q15	0.669	1
FBXW7	Del_7q36.1	0.669	1
MLL3	ZMYM3	0.669	1
NCOR1	Amp_6p23	0.669	1
PIK3CA	Amp_12q15	0.669	1
RBMX	11p-Del	0.669	1
RBMX	Del_9q34.2	0.669	1
ZMYM3	Del_7q36.1	0.669	1
PAX2	8q-Amp	0.67	1
RAB42	8q-Amp	0.67	1
RUNX1	17p-Del	0.67	1
RUNX1	Del_11p15.5	0.67	1
16p-Amp	Del_10q23.31	0.67	1
1q-Amp	Amp_10q22.3	0.67	1
FGFR2	6q-Del	0.671	1
IRS4	6q-Del	0.671	1
MAP2K4	Amp_3q26.32	0.671	1
NLGN3	6q-Del	0.671	1
PIK3R1	Del_6q27	0.671	1
PIK3R1	Del_12p13.1	0.671	1
CDH1	1p-Del	0.672	1
GPS2	Amp_3q26.32	0.672	1
MYB	Amp_6p23	0.672	1
PTPN22	Amp_3q26.32	0.672	1
20p-Amp	4p-Del	0.672	1
Amp_8p11.23	Amp_10p15.1	0.672	1
Amp_10p15.1	Del_22q13.32	0.672	1
TPP2	Del_17q21.31	0.673	1
ZFP36L1	Del_17q21.31	0.673	1
Amp_1q21.3	Amp_4q13.3	0.673	1
CASZ1	Del_2q37.3	0.674	1
KDM6A	11q-Del	0.674	1
SMAD4	11q-Del	0.674	1
SPEN	Del_3p21.31	0.674	1
TAF1L	Del_18q23	0.674	1
7p-Amp	11q-Del	0.674	1
7p-Amp	Del_10q26.3	0.674	1
Amp_12q15	Del_2q37.3	0.674	1
AQP12A	Amp_17q12	0.675	1
FBXW7	14q-Del	0.675	1
FBXW7	Amp_19q12	0.675	1
GPRIN2	1q-Amp	0.675	1
ICOSLG	Amp_17q12	0.675	1
KDM6A	Amp_19q12	0.675	1
MAP2K4	Amp_12q15	0.675	1
NLGN3	1q-Amp	0.675	1
ZMYM3	Amp_19q12	0.675	1
16p-Amp	Amp_19q12	0.675	1
8p-Del	Amp_12p13.33	0.675	1
Amp_1q44	Amp_17q12	0.675	1
Amp_1q44	Del_11p15.5	0.675	1
CDC42EP1	Amp_1q21.3	0.676	1
ERBB2	Amp_6q21	0.676	1
EYS	Del_1p22.1	0.676	1
RB1	Amp_6q21	0.676	1
SF3B1	15q-Del	0.676	1
SF3B1	Del_20p13	0.676	1
USP36	Del_18q23	0.676	1
SMAD4	Del_3p21.31	0.677	1
TBX3	13q-Del	0.677	1
TBX3	Amp_8p11.21	0.677	1
TFE3	Del_9p21.3	0.677	1
ZFP36L2	Del_9p21.3	0.677	1
17p-Del	Amp_19q12	0.677	1
C17orf95	Amp_20q13.2	0.678	1
CDC42EP1	Amp_20q13.2	0.678	1
EYS	Del_12q23.1	0.678	1
FBXW7	Del_3p21.31	0.678	1
FRMPD2	Amp_17q12	0.678	1
HRNR	Del_11q23.3	0.678	1
NBPF9	Amp_20q13.2	0.678	1
NF1	17q-Amp	0.678	1
NF1	Amp_4q13.3	0.678	1
PIK3CA	17p-Del	0.678	1
RUNX1	11p-Del	0.678	1
TBX3	17q-Amp	0.678	1
TBX3	Amp_4q13.3	0.678	1
ZMYM3	Del_9p21.3	0.678	1
FGFR2	18p-Del	0.679	1
GPRIN2	8p-Amp	0.679	1
GPS2	Del_1p22.1	0.679	1
IRS4	8p-Amp	0.679	1
NLGN3	18p-Del	0.679	1
1q-Amp	11q-Del	0.679	1
7p-Amp	Del_12p13.1	0.679	1
4p-Del	Amp_11q13.3	0.679	1
KDM6A	Amp_12p13.33	0.68	1
KDM6A	Del_9q21.11	0.68	1
TP53	ZFP36L2	0.68	1
ZMYM3	Amp_12p13.33	0.68	1
Amp_8p11.23	Del_4p16.3	0.68	1
CBFB	Amp_20q13.2	0.681	1
FGFR2	8p-Del	0.681	1
GPRIN2	8p-Del	0.681	1
KCNN3	8q-Amp	0.681	1
MYB	Del_5q21.3	0.681	1
TGS1	Del_5q21.3	0.681	1
VCPIP1	8q-Amp	0.681	1
16p-Amp	Del_18q23	0.681	1
5p-Amp	Amp_10q22.3	0.681	1
C17orf95	Del_22q13.32	0.682	1
EYS	Del_4p16.3	0.682	1
HRNR	MAP3K1	0.682	1
16q-Del	Del_10q26.3	0.682	1
Amp_1p22.3	Del_6p25.3	0.682	1
Amp_11p13	Del_9q34.2	0.682	1
CDKN1B	Del_4p16.3	0.683	1
ERBB2	Amp_11p13	0.683	1
FGFR2	GATA3	0.683	1
FGFR2	4p-Del	0.683	1
GATA3	GPRIN2	0.683	1
GATA3	IRS4	0.683	1
IL1RAP	Del_14q24.1	0.683	1
TBL1XR1	Del_14q24.1	0.683	1
VCPIP1	Del_11p15.5	0.683	1
VCPIP1	Del_14q24.1	0.683	1
ERBB2	Del_11p15.5	0.684	1
ERBB2	Del_14q24.1	0.684	1
MAP2K4	Del_21q11.2	0.684	1
4p-Del	Amp_8p11.23	0.684	1
6q-Del	Del_5q11.2	0.684	1
Amp_11p13	Del_10q23.31	0.684	1
EYS	1p-Del	0.685	1
EYS	Amp_14q21.1	0.685	1
NCOR1	Del_5q21.3	0.685	1
NCOR1	Del_11p15.5	0.685	1
8p-Amp	14q-Del	0.685	1
APC	16q-Del	0.686	1
FBXW7	MAP3K1	0.686	1
FBXW7	4q-Del	0.686	1
KDM6A	4q-Del	0.686	1
RUNX1	Del_2q37.3	0.686	1
ZMYM3	4q-Del	0.686	1
Amp_4q13.3	Amp_6p23	0.686	1
ACTL6B	CDH1	0.687	1
CDH1	CDKN1B	0.687	1
CDH1	EYS	0.687	1
FGFR2	Del_10q26.3	0.687	1
GPRIN2	9p-Del	0.687	1
GPRIN2	Del_10q26.3	0.687	1
IRS4	Del_10q26.3	0.687	1
NLGN3	9p-Del	0.687	1
NLGN3	Amp_20q13.2	0.687	1
7q-Amp	16p-Del	0.687	1
FOXA1	Del_3p21.31	0.688	1
HRNR	PTEN	0.688	1
RB1	Del_8p23.2	0.688	1
SMAD2	Del_1p36.13	0.688	1
SMAD4	Del_1p36.13	0.688	1
TFE3	Del_1p36.13	0.688	1
CBFB	Del_17p12	0.689	1
FOXA1	8q-Amp	0.689	1
IRS4	Del_17p12	0.689	1
NCOR1	Del_9p21.3	0.689	1
1q-Amp	Amp_19q12	0.689	1
16p-Del	Amp_1q44	0.689	1
Amp_1p22.3	Amp_3p25.1	0.689	1
Amp_11q14.1	Amp_14q21.1	0.689	1
Amp_13q34	Del_1p22.1	0.689	1
FRMPD2	Amp_1q44	0.69	1
IL1RAP	Del_19p13.3	0.69	1
KCNN3	Del_19p13.3	0.69	1
MUC6	Del_6q15	0.69	1
MYB	20p-Amp	0.69	1
MYB	Del_11q13.1	0.69	1
RUNX1	Del_6q15	0.69	1
TBL1XR1	Del_19p13.3	0.69	1
16p-Amp	Amp_17q12	0.69	1
Amp_10q22.3	Amp_11p13	0.69	1
16p-Amp	Del_9q21.11	0.691	1
Amp_19q12	Del_11q23.3	0.691	1
FOXA1	Del_10q23.31	0.692	1
20q-Amp	Amp_15q26.3	0.692	1
4p-Del	Amp_8p11.21	0.692	1
APC	Del_7q36.1	0.693	1
CTCF	Del_7q36.1	0.693	1
GPRIN2	Amp_8p11.21	0.693	1
IRS4	Amp_8p11.21	0.693	1
MLL3	SF3B1	0.693	1
MYH9	Amp_12q15	0.693	1
NLGN3	Amp_8p11.21	0.693	1
NLGN3	Del_22q13.32	0.693	1
SF3B1	Del_7q36.1	0.693	1
ACTL6B	Amp_11q14.1	0.694	1
CDKN1B	20q-Amp	0.694	1
CTCF	Amp_1q21.3	0.694	1
GPS2	Amp_11q14.1	0.694	1
MYB	22q-Del	0.694	1
PTPN22	Amp_11q14.1	0.694	1
TGS1	22q-Del	0.694	1
7q-Amp	Del_6p25.3	0.694	1
1q-Del	Amp_11q14.1	0.694	1
CBFB	Del_12q23.1	0.695	1
16q-Del	Amp_6q21	0.695	1
MAP3K1	Amp_11q14.1	0.696	1
MUC6	11p-Del	0.696	1
PIK3R1	11p-Del	0.696	1
PIK3R1	Del_9q34.2	0.696	1
SPEN	Del_1p36.13	0.696	1
15q-Del	Amp_17q12	0.696	1
9q-Del	Amp_17q12	0.696	1
Amp_13q34	Del_9p21.3	0.696	1
Amp_17q12	Del_20p13	0.696	1
GPS2	16p-Amp	0.697	1
PTPN22	16p-Amp	0.697	1
16p-Amp	1p-Del	0.697	1
16p-Amp	1q-Del	0.697	1
20q-Amp	Amp_1p22.3	0.697	1
9p-Del	Amp_1q44	0.697	1
C17orf95	Amp_8q24.21	0.698	1
CDH1	MAP2K4	0.698	1
TAF1L	15q-Del	0.698	1
TAF1L	9q-Del	0.698	1
ZFP36L2	Del_6q27	0.698	1
1q-Amp	Amp_3q26.32	0.698	1
7p-Amp	Del_6p25.3	0.698	1
7q-Amp	22q-Del	0.698	1
Del_1p22.1	Del_5q11.2	0.698	1
APC	17q-Del	0.699	1
EYS	Amp_13q34	0.699	1
FGFR2	Amp_10p15.1	0.699	1
MYH9	14q-Del	0.699	1
MYH9	17q-Del	0.699	1
MYH9	Amp_19q12	0.699	1
SF3B1	14q-Del	0.699	1
7q-Amp	Del_11q25	0.699	1
HRNR	Del_3p21.31	0.7	1
NCDN	Del_11q25	0.7	1
NCOR1	20p-Amp	0.7	1
NCOR1	Del_11q13.1	0.7	1
RAB42	Del_11q25	0.7	1
RUNX1	Amp_10q22.3	0.7	1
ZNF362	Del_11q25	0.7	1
CDC42EP1	Amp_11q13.3	0.701	1
MUC6	13q-Del	0.701	1
NBPF9	Amp_11q13.3	0.701	1
PIK3R1	13q-Del	0.701	1
8p-Amp	16p-Del	0.701	1
FRMPD2	Amp_6p23	0.702	1
MLL3	Amp_8q24.21	0.702	1
MLL3	Del_12q23.1	0.702	1
MYB	6q-Del	0.702	1
TAF1L	Amp_20q13.2	0.702	1
TGS1	6q-Del	0.702	1
Amp_1q44	Del_3p21.31	0.702	1
FGFR2	Amp_1p22.3	0.703	1
GPRIN2	Amp_1p22.3	0.703	1
TBX3	Del_17q21.31	0.703	1
20q-Amp	Del_4q35.1	0.703	1
APC	Amp_12p13.33	0.704	1
EYS	Amp_1q44	0.704	1
PTPN22	Del_15q13.1	0.704	1
SF3B1	Amp_12p13.33	0.704	1
KDM6A	Del_17p12	0.705	1
RUNX1	13q-Del	0.705	1
ZFP36L1	Del_11q23.3	0.705	1
ZMYM3	Del_17p12	0.705	1
KDM6A	Del_6p25.3	0.706	1
NF1	Amp_6p23	0.706	1
NLGN3	Amp_3q26.32	0.706	1
TBX3	Amp_6p23	0.706	1
VCPIP1	Del_9p23	0.706	1
17q-Amp	Del_11p15.5	0.706	1
11q-Del	Amp_4q13.3	0.706	1
Amp_4q13.3	Del_11p15.5	0.706	1
Amp_8p11.23	Del_15q13.1	0.706	1
CBFB	Del_5q11.2	0.707	1
5p-Amp	Amp_19p13.12	0.707	1
ARID1A	Amp_3p25.1	0.708	1
KCNN3	Del_16q24.3	0.708	1
VCPIP1	Del_16q24.3	0.708	1
CTCF	11q-Del	0.709	1
CTCF	4q-Del	0.709	1
KDM6A	Del_6q27	0.709	1
MAP2K4	Amp_1q21.3	0.709	1
MAP3K1	SF3B1	0.709	1
MYH9	11q-Del	0.709	1
TAF1L	Del_22q13.32	0.709	1
Amp_8p11.23	Del_5q21.3	0.709	1
CASZ1	Del_8p23.2	0.71	1
FRMPD2	Del_5q21.3	0.71	1
MAP2K4	20q-Amp	0.71	1
RBMX	Del_8p23.2	0.71	1
Amp_8p11.23	Del_12p13.1	0.71	1
FOXA1	Del_12q23.1	0.711	1
FOXA1	Del_12q24.31	0.711	1
MAP2K4	16p-Del	0.711	1
MYB	8p-Amp	0.711	1
TFE3	Del_6q15	0.711	1
TGS1	8p-Amp	0.711	1
9p-Del	Amp_8p11.21	0.711	1
Amp_1q44	Amp_4q13.3	0.711	1
ERBB2	8q-Amp	0.712	1
FBXW7	Del_13q14.2	0.712	1
HRNR	Del_6p25.3	0.712	1
KDM6A	Del_13q14.2	0.712	1
MLL3	8q-Amp	0.712	1
SP3	Amp_17q23.1	0.712	1
TCP11	Amp_17q23.1	0.712	1
17q-Amp	Del_9p21.3	0.712	1
Amp_1q21.3	Del_10q26.3	0.712	1
Del_12q23.1	Del_21q11.2	0.712	1
ACTL6B	Del_13q14.2	0.713	1
APC	Del_3p21.31	0.713	1
CTCF	Del_3p21.31	0.713	1
EYS	5p-Amp	0.713	1
EYS	Amp_6q21	0.713	1
MYH9	Del_3p21.31	0.713	1
PTPN22	Del_13q14.2	0.713	1
SF3B1	Del_3p21.31	0.713	1
SF3B1	Del_9p21.3	0.713	1
Amp_14q21.1	Del_11q13.1	0.713	1
GPRIN2	Del_1p22.1	0.714	1
Amp_1q44	Del_5q11.2	0.714	1
GATA3	TGS1	0.715	1
IL1RAP	Del_17q21.31	0.715	1
KCNN3	Del_17q21.31	0.715	1
RB1	Amp_15q26.3	0.715	1
TAF1L	Del_7q36.1	0.715	1
TBL1XR1	Del_17q21.31	0.715	1
VCPIP1	Del_17q21.31	0.715	1
16p-Amp	Del_15q13.1	0.715	1
1p-Del	Del_19q13.32	0.715	1
Amp_14q21.1	Del_7q36.1	0.715	1
ICOSLG	22q-Del	0.716	1
RUFY1	22q-Del	0.716	1
SPEN	17q-Amp	0.716	1
SPEN	Amp_4q13.3	0.716	1
SPEN	Del_9q34.2	0.716	1
SPEN	Del_11p15.5	0.716	1
7q-Amp	11p-Del	0.716	1
PTEN	Amp_10p15.1	0.717	1
SP3	Del_16q24.3	0.717	1
TCP11	Del_16q24.3	0.717	1
17q-Amp	Del_11q13.1	0.717	1
7p-Amp	Del_17q21.31	0.717	1
Amp_4q13.3	Del_11q13.1	0.717	1
FGFR2	Del_4p16.3	0.718	1
FOXA1	Amp_14q21.1	0.718	1
IRS4	Del_4p16.3	0.718	1
PIK3R1	Amp_17q12	0.718	1
ZFP36L2	13q-Del	0.718	1
CASZ1	20p-Amp	0.719	1
CASZ1	Del_11q13.1	0.719	1
FBXW7	17p-Del	0.719	1
GPRIN2	Amp_11q13.3	0.719	1
IL1RAP	Del_18q23	0.719	1
MAP2K4	11q-Del	0.719	1
NLGN3	Amp_11q13.3	0.719	1
PTPN22	17p-Del	0.719	1
RBMX	20p-Amp	0.719	1
RBMX	Del_11q13.1	0.719	1
TGS1	9p-Del	0.719	1
APC	Del_12p13.1	0.72	1
GATA3	Del_1p36.13	0.72	1
Amp_6q21	Amp_8p11.21	0.72	1
ACTL6B	Del_14q24.1	0.721	1
CDH1	GPRIN2	0.721	1
CDKN1B	Del_11p15.5	0.721	1
GPS2	Del_14q24.1	0.721	1
IRS4	Amp_1q21.3	0.721	1
KDM6A	11p-Del	0.721	1
NLGN3	Amp_1q21.3	0.721	1
TAF1L	14q-Del	0.721	1
TP53	Amp_8p11.23	0.721	1
5p-Amp	Del_1p22.1	0.721	1
Del_9q21.11	Del_12q24.31	0.721	1
CBFB	20q-Amp	0.722	1
CDC42EP1	Amp_8p11.23	0.722	1
TBX3	Amp_3p25.1	0.722	1
TGS1	Del_10q23.31	0.722	1
ZFP36L1	11q-Del	0.722	1
18q-Del	Amp_15q26.3	0.722	1
IL1RAP	Del_11q25	0.723	1
SPEN	Del_17p12	0.723	1
VCPIP1	Del_11q25	0.723	1
20p-Amp	17p-Del	0.723	1
7q-Amp	Del_17p12	0.723	1
Amp_11q14.1	Amp_13q34	0.723	1
5p-Amp	Del_17p12	0.724	1
7p-Amp	11p-Del	0.724	1
ARID1A	Del_19q13.32	0.725	1
GATA3	Del_18q23	0.725	1
MAP2K4	Del_3p21.31	0.725	1
RUNX1	Amp_6p23	0.725	1
TPP2	Del_9p21.3	0.725	1
ZFP36L1	Del_3p21.31	0.725	1
ZFP36L1	Del_9p21.3	0.725	1
7q-Amp	Amp_10q22.3	0.725	1
Amp_1q21.3	Del_22q13.32	0.725	1
Amp_1q44	Del_5q21.3	0.725	1
NCDN	16q-Del	0.726	1
RAB42	16q-Del	0.726	1
TAF1L	Del_9q21.11	0.726	1
ZBTB7C	16q-Del	0.726	1
4q-Del	Amp_8p11.21	0.726	1
6q-Del	Amp_1q44	0.726	1
PIK3CA	Amp_1q21.3	0.727	1
RUNX1	Del_17q21.31	0.727	1
USP36	Amp_8q24.21	0.727	1
ZMYM3	Del_6q15	0.727	1
11q-Del	Amp_6q21	0.727	1
CDKN1B	Del_19p13.3	0.728	1
FGFR2	Amp_11q14.1	0.728	1
GPRIN2	Amp_11q14.1	0.728	1
GPS2	Del_19p13.3	0.728	1
HRNR	17q-Amp	0.728	1
IRS4	20q-Amp	0.728	1
MED23	Amp_6p23	0.728	1
MUC6	Amp_6p23	0.728	1
NLGN3	20q-Amp	0.728	1
PIK3R1	Amp_6p23	0.728	1
PTPN22	Del_19p13.3	0.728	1
11q-Del	Amp_10q22.3	0.728	1
MAP2K4	Del_15q13.1	0.729	1
APC	Del_6p25.3	0.73	1
CTCF	Del_6p25.3	0.73	1
HRNR	PIK3CA	0.73	1
MYH9	Del_6p25.3	0.73	1
NCOR1	18q-Del	0.73	1
RB1	Del_17q21.31	0.73	1
5p-Amp	Amp_8p11.23	0.73	1
7q-Amp	Del_13q14.2	0.73	1
APC	Amp_8q24.21	0.731	1
MAP3K1	TAF1L	0.731	1
RBMX	Amp_17q23.1	0.731	1
ZFP36L2	Amp_17q12	0.731	1
11q-Del	Amp_12p13.33	0.731	1
Amp_1p22.3	Amp_12q15	0.731	1
Amp_3q26.32	Del_19q13.32	0.731	1
IRS4	16p-Amp	0.732	1
NCDN	Del_11q23.3	0.732	1
NCOR1	Del_9p23	0.732	1
RAB42	Del_11q23.3	0.732	1
ZNF362	Del_11q23.3	0.732	1
7p-Amp	Del_2q37.3	0.732	1
C17orf95	Del_13q14.2	0.733	1
CDC42EP1	Del_13q14.2	0.733	1
MAP3K1	9p-Del	0.733	1
8p-Amp	4p-Del	0.733	1
11p-Del	Amp_3q26.32	0.733	1
RB1	Del_18q23	0.734	1
TGS1	Amp_1p22.3	0.734	1
16p-Amp	Del_12p13.1	0.734	1
Amp_19q13.42	Del_3p21.31	0.734	1
RUNX1	Amp_3p25.1	0.735	1
TAF1L	16q-Del	0.735	1
5p-Amp	Del_20p13	0.735	1
8q-Amp	14q-Del	0.735	1
Amp_13q34	Del_19q13.32	0.735	1
18q-Del	Amp_6p23	0.736	1
CASZ1	22q-Del	0.737	1
EYS	Del_14q24.1	0.737	1
HRNR	Amp_10q22.3	0.737	1
MED23	Del_5q21.3	0.737	1
MLL3	14q-Del	0.737	1
MLL3	17q-Del	0.737	1
MLL3	Amp_19q12	0.737	1
NBPF9	17p-Del	0.737	1
PIK3R1	Del_5q21.3	0.737	1
8q-Amp	Del_4p16.3	0.737	1
CDH1	5p-Amp	0.738	1
ERBB2	15q-Del	0.738	1
ERBB2	9q-Del	0.738	1
KDM6A	13q-Del	0.738	1
MYB	Amp_3q26.32	0.738	1
NCOR1	Amp_11q13.3	0.738	1
NF1	Del_19q13.32	0.738	1
RUNX1	Del_5q21.3	0.738	1
ZMYM3	13q-Del	0.738	1
GPRIN2	Del_4q35.1	0.739	1
IRS4	Del_15q13.1	0.739	1
NLGN3	Del_15q13.1	0.739	1
PTPN22	8q-Amp	0.739	1
SPEN	17p-Del	0.739	1
TP53	7q-Amp	0.739	1
1q-Amp	Del_9q34.2	0.739	1
8q-Amp	1q-Del	0.739	1
Amp_4q13.3	Del_16q24.3	0.739	1
Amp_10p15.1	Del_9p21.3	0.739	1
ARID1A	18p-Del	0.74	1
GPRIN2	Amp_1q44	0.74	1
KRAS	8p-Del	0.74	1
MAP2K4	17q-Amp	0.74	1
MLL3	Amp_3q26.32	0.74	1
MLL3	Amp_13q34	0.74	1
MYB	Amp_8p11.21	0.74	1
MYB	Del_22q13.32	0.74	1
PIK3CA	1p-Del	0.74	1
PIK3CA	Amp_14q21.1	0.74	1
RUFY1	8p-Del	0.74	1
SP3	8p-Del	0.74	1
TGS1	Del_22q13.32	0.74	1
MAP2K4	Amp_1q44	0.741	1
Amp_1q44	Del_20p13	0.741	1
APC	1q-Amp	0.742	1
MAP3K1	1q-Amp	0.742	1
MAP3K1	Del_10q23.31	0.742	1
20p-Amp	Amp_13q34	0.742	1
17p-Del	Amp_10p15.1	0.742	1
Amp_13q34	Del_11q13.1	0.742	1
APC	Del_6q27	0.743	1
CASZ1	16q-Del	0.743	1
FRMPD2	GATA3	0.743	1
FRMPD2	16q-Del	0.743	1
GATA3	RBMX	0.743	1
MAP3K1	1p-Del	0.743	1
NCOR1	4p-Del	0.743	1
NCOR1	Del_20p13	0.743	1
TBX3	Del_11q25	0.743	1
16p-Amp	Del_9p23	0.743	1
5p-Amp	Del_17q21.31	0.743	1
ACTL6B	Del_9p23	0.744	1
APC	11p-Del	0.744	1
CTCF	11p-Del	0.744	1
CTCF	Del_9q34.2	0.744	1
GPS2	Del_9p23	0.744	1
ICOSLG	Amp_20q13.2	0.744	1
MLL3	Del_13q14.2	0.744	1
PTEN	Amp_20q13.2	0.744	1
RUFY1	Amp_20q13.2	0.744	1
SF3B1	11p-Del	0.744	1
TCP11	Amp_20q13.2	0.744	1
ZMYM3	8q-Amp	0.744	1
7p-Amp	Del_17p12	0.744	1
Amp_1p22.3	Del_8p23.2	0.744	1
Amp_1p22.3	Del_21q11.2	0.744	1
MUC6	20p-Amp	0.745	1
PIK3R1	20p-Amp	0.745	1
TAF1L	Del_9p21.3	0.745	1
TGS1	Del_1p22.1	0.745	1
FOXA1	5p-Amp	0.746	1
FOXA1	Amp_11q14.1	0.746	1
PTEN	17p-Del	0.746	1
CASZ1	9p-Del	0.747	1
FRMPD2	Del_10q26.3	0.747	1
MLL3	Amp_12p13.33	0.747	1
RBMX	9p-Del	0.747	1
TBX3	Del_17p12	0.747	1
18p-Del	Amp_6p23	0.747	1
FOXA1	Del_6q15	0.748	1
GPRIN2	Amp_8p11.23	0.748	1
ICOSLG	Del_22q13.32	0.748	1
IRS4	Amp_8p11.23	0.748	1
MED23	Del_11q25	0.748	1
NF1	6q-Del	0.748	1
NLGN3	Amp_8p11.23	0.748	1
RUFY1	Amp_8p11.21	0.748	1
RUFY1	Del_22q13.32	0.748	1
APC	Del_2q37.3	0.749	1
MAP2K4	Amp_10q22.3	0.749	1
MYH9	Del_2q37.3	0.749	1
16p-Amp	Amp_3p25.1	0.749	1
17q-Del	Amp_6p23	0.749	1
C17orf95	8q-Amp	0.751	1
FRMPD2	Del_10q23.31	0.751	1
GATA3	17p-Del	0.751	1
RUNX1	Del_19q13.32	0.751	1
TAF1L	Del_6p25.3	0.751	1
5q-Del	Amp_20q13.2	0.751	1
Amp_8p11.23	Del_6p25.3	0.751	1
Amp_14q21.1	Del_14q24.1	0.751	1
CBFB	Amp_17q12	0.752	1
CDH1	MYB	0.752	1
FOXA1	Amp_11p13	0.752	1
GPRIN2	Amp_8q24.21	0.752	1
Amp_10p15.1	Amp_11q13.3	0.752	1
ACTL6B	Del_17q21.31	0.753	1
FBXW7	Amp_6p23	0.753	1
PAX2	1q-Amp	0.753	1
ZBTB7C	1q-Amp	0.753	1
ZMYM3	Amp_6p23	0.753	1
ZNF362	1q-Amp	0.753	1
18p-Del	Amp_4q13.3	0.753	1
Amp_1p22.3	Del_3p21.31	0.753	1
ZMYM3	Amp_17q12	0.754	1
5p-Amp	Del_19q13.32	0.754	1
ARID1A	22q-Del	0.755	1
FGFR2	Del_14q24.1	0.755	1
GPRIN2	Del_11p15.5	0.755	1
HRNR	Amp_19p13.12	0.755	1
SF3B1	Del_13q14.2	0.755	1
CDKN1B	Del_18q23	0.756	1
MAP2K4	Del_2q37.3	0.756	1
NCOR1	Del_18q23	0.756	1
17q-Amp	15q-Del	0.756	1
17q-Amp	Del_20p13	0.756	1
9q-Del	Amp_4q13.3	0.756	1
Amp_4q13.3	Del_20p13	0.756	1
PIK3R1	6q-Del	0.757	1
SF3B1	Del_17p12	0.757	1
Amp_10q22.3	Del_1p36.13	0.757	1
CASZ1	Amp_10p15.1	0.758	1
FOXA1	5q-Del	0.758	1
MAP2K4	Del_11p15.5	0.758	1
MAP2K4	Del_14q24.1	0.758	1
SMAD4	Del_8p23.2	0.758	1
TPP2	Del_6q15	0.758	1
Amp_1q44	Del_22q13.32	0.758	1
MYB	TP53	0.759	1
MYB	20q-Amp	0.759	1
SPEN	Amp_20q13.2	0.759	1
TAF1L	Del_1p36.13	0.759	1
TBX3	8p-Amp	0.759	1
Amp_4q13.3	Del_6q27	0.759	1
MAP2K4	Amp_8q24.21	0.76	1
PTEN	Amp_1q44	0.76	1
RB1	Amp_19q12	0.76	1
RB1	Del_21q11.2	0.76	1
SF3B1	Del_6q15	0.76	1
VCPIP1	16q-Del	0.76	1
16p-Amp	Del_6p25.3	0.76	1
16p-Amp	Del_20p13	0.76	1
1q-Amp	Amp_4q13.3	0.76	1
FBXW7	Del_5q21.3	0.761	1
FGFR2	Del_19p13.3	0.761	1
GATA3	1p-Del	0.761	1
MUC6	18q-Del	0.761	1
PIK3CA	Del_17p12	0.761	1
PIK3R1	Amp_1q44	0.761	1
RAB42	Del_17p12	0.761	1
SPEN	Amp_6p23	0.761	1
ZBTB7C	Del_17p12	0.761	1
ZMYM3	Del_5q21.3	0.761	1
20p-Amp	Del_1p22.1	0.761	1
ARID1A	1p-Del	0.762	1
ARID1A	Amp_14q21.1	0.762	1
PIK3CA	5p-Amp	0.762	1
Amp_1p22.3	Amp_20q13.2	0.762	1
Amp_6q21	Del_1p36.13	0.762	1
8p-Amp	Del_6p25.3	0.763	1
Amp_11p13	Del_19q13.32	0.763	1
IL1RAP	11q-Del	0.764	1
IRS4	Del_13q14.2	0.764	1
TBL1XR1	11q-Del	0.764	1
CASZ1	Amp_3q26.32	0.765	1
FRMPD2	Amp_3q26.32	0.765	1
GATA3	NF1	0.765	1
MAP3K1	13q-Del	0.765	1
MED23	8p-Amp	0.765	1
RB1	Amp_12p13.33	0.765	1
TAF1L	11p-Del	0.765	1
TAF1L	Del_9q34.2	0.765	1
TPP2	13q-Del	0.765	1
Amp_19q13.42	Del_13q14.2	0.765	1
APC	Del_16q24.3	0.766	1
IL1RAP	Del_3p21.31	0.766	1
IL1RAP	Del_9p21.3	0.766	1
NCDN	TP53	0.766	1
NCOR1	Del_7q36.1	0.766	1
PAX2	TP53	0.766	1
TBL1XR1	Del_9p21.3	0.766	1
TP53	ZBTB7C	0.766	1
TP53	ZNF362	0.766	1
VCPIP1	Del_3p21.31	0.766	1
VCPIP1	Del_9p21.3	0.766	1
ZFP36L2	Amp_17q23.1	0.766	1
Amp_3q26.32	Del_9q21.11	0.766	1
PTEN	20q-Amp	0.767	1
16q-Del	Amp_19p13.12	0.767	1
IL1RAP	Del_11q23.3	0.768	1
KCNN3	Del_11q23.3	0.768	1
MAP3K1	14q-Del	0.768	1
MAP3K1	Amp_19q12	0.768	1
MAP3K1	Del_14q24.1	0.768	1
MAP3K1	Del_21q11.2	0.768	1
SPEN	Amp_8p11.21	0.768	1
Amp_6q21	Del_11q13.1	0.768	1
CASZ1	8p-Del	0.769	1
GATA3	MUC6	0.769	1
KDM6A	Del_11q13.1	0.769	1
MED23	Del_8p23.2	0.769	1
NCOR1	Amp_10p15.1	0.769	1
PIK3CA	20q-Amp	0.769	1
ZMYM3	20p-Amp	0.769	1
Amp_1p22.3	Del_1p22.1	0.769	1
ERBB2	4q-Del	0.77	1
RB1	4q-Del	0.77	1
SF3B1	13q-Del	0.77	1
SMAD2	22q-Del	0.77	1
TAF1L	Del_2q37.3	0.77	1
8p-Amp	Del_3p21.31	0.77	1
Amp_19q12	Del_1p22.1	0.77	1
FRMPD2	Del_16q24.3	0.771	1
PTEN	17q-Amp	0.771	1
RBMX	Del_16q24.3	0.771	1
RBMX	Del_1p22.1	0.772	1
RUNX1	18q-Del	0.772	1
SPEN	8q-Amp	0.772	1
SPEN	Del_5q21.3	0.772	1
5p-Amp	17q-Del	0.772	1
CDH1	16p-Del	0.773	1
EYS	15q-Del	0.773	1
MED23	Del_10q26.3	0.773	1
NCOR1	17q-Del	0.773	1
PIK3R1	Amp_8q24.21	0.773	1
PIK3R1	Del_10q26.3	0.773	1
TAF1L	Del_6q27	0.773	1
Amp_4q13.3	Del_10q23.31	0.773	1
1q-Amp	Del_1p36.13	0.774	1
Amp_11p13	Del_7q36.1	0.774	1
APC	Amp_6p23	0.775	1
CASZ1	Amp_20q13.2	0.775	1
HRNR	Del_9p23	0.775	1
MLL3	Del_11q13.1	0.775	1
MYH9	Amp_6p23	0.775	1
PIK3R1	22q-Del	0.775	1
SF3B1	Amp_6p23	0.775	1
TAF1L	Amp_8p11.23	0.775	1
TBX3	Amp_14q21.1	0.775	1
CASZ1	Del_5q11.2	0.776	1
FRMPD2	Del_5q11.2	0.776	1
IL1RAP	Del_1p36.13	0.776	1
MED23	Del_10q23.31	0.776	1
MUC6	Del_10q23.31	0.776	1
PIK3R1	Del_10q23.31	0.776	1
RUNX1	Del_11q25	0.776	1
VCPIP1	Del_1p36.13	0.776	1
5p-Amp	17p-Del	0.776	1
22q-Del	Amp_17q12	0.776	1
Amp_14q21.1	Del_10q23.31	0.776	1
GPRIN2	Del_9p23	0.777	1
HRNR	Amp_6p23	0.777	1
NLGN3	Del_9p23	0.777	1
RUNX1	8p-Amp	0.777	1
USP36	Amp_17q12	0.777	1
17q-Amp	Del_7q36.1	0.778	1
7p-Amp	Del_15q13.1	0.778	1
17p-Del	Amp_1q44	0.778	1
22q-Del	Amp_4q13.3	0.778	1
CDH1	RBMX	0.779	1
Amp_1q44	Amp_11p13	0.779	1
ERBB2	Amp_8p11.21	0.78	1
FRMPD2	Amp_8p11.21	0.78	1
FRMPD2	Del_22q13.32	0.78	1
NCOR1	Del_9q21.11	0.78	1
ZMYM3	6q-Del	0.781	1
1q-Amp	14q-Del	0.781	1
16p-Del	Amp_4q13.3	0.781	1
KCNN3	Amp_1q21.3	0.782	1
NCOR1	Amp_3q26.32	0.782	1
APC	Del_5q21.3	0.783	1
CTCF	Del_5q21.3	0.783	1
FOXA1	Del_11p15.5	0.783	1
MED23	Amp_10p15.1	0.783	1
PIK3R1	Amp_10p15.1	0.783	1
RUNX1	4p-Del	0.783	1
SF3B1	Del_5q21.3	0.783	1
SPEN	Del_11q13.1	0.784	1
20q-Amp	16p-Del	0.784	1
Amp_19q12	Del_6q27	0.784	1
AQP12A	Amp_8p11.23	0.785	1
FBXW7	18q-Del	0.785	1
MYB	Del_11p15.5	0.785	1
MYB	Del_14q24.1	0.785	1
NLGN3	Del_17q21.31	0.785	1
TBX3	Amp_10p15.1	0.785	1
14q-Del	Amp_4q13.3	0.785	1
Amp_8p11.23	Del_4q35.1	0.785	1
CASZ1	20q-Amp	0.786	1
CTCF	Amp_17q12	0.786	1
FRMPD2	Amp_11q14.1	0.786	1
HRNR	Del_19q13.32	0.786	1
RBMX	Amp_11q14.1	0.786	1
VCPIP1	Del_6q27	0.786	1
ARID1A	Del_1p22.1	0.787	1
FGFR2	8q-Amp	0.787	1
MED23	Amp_1p22.3	0.787	1
MUC6	Amp_1p22.3	0.787	1
NF1	Del_13q14.2	0.787	1
NLGN3	8q-Amp	0.787	1
PTEN	TP53	0.787	1
RUNX1	1p-Del	0.787	1
RUNX1	Amp_14q21.1	0.787	1
5p-Amp	Del_6q27	0.787	1
ARID1A	5p-Amp	0.788	1
CASZ1	1q-Amp	0.788	1
EYS	Del_8p23.2	0.788	1
FBXW7	18p-Del	0.788	1
FRMPD2	1q-Amp	0.788	1
HRNR	Del_5q21.3	0.788	1
IRS4	Del_18q23	0.788	1
KDM6A	8p-Amp	0.788	1
MAP3K1	4q-Del	0.788	1
MAP3K1	Amp_11q13.3	0.788	1
NF1	Amp_13q34	0.788	1
RBMX	1q-Amp	0.788	1
RUNX1	Del_10q26.3	0.788	1
TBX3	Amp_13q34	0.788	1
17q-Del	Amp_1q44	0.788	1
CBFB	Del_20p13	0.789	1
EYS	Amp_12q15	0.789	1
FRMPD2	16p-Amp	0.789	1
PTEN	Del_3p21.31	0.789	1
RB1	Del_6p25.3	0.789	1
RBMX	16p-Amp	0.789	1
16p-Amp	5q-Del	0.789	1
1q-Amp	Del_12p13.1	0.789	1
GATA3	Del_20p13	0.79	1
HRNR	Del_17q21.31	0.79	1
MED23	Amp_3q26.32	0.79	1
NF1	Amp_1p22.3	0.79	1
TAF1L	Del_6q15	0.79	1
Amp_1p22.3	Del_17p12	0.79	1
APC	20p-Amp	0.791	1
CTCF	Del_11q13.1	0.791	1
FBXW7	Del_11q25	0.791	1
FGFR2	Del_8p23.2	0.791	1
GPRIN2	Del_8p23.2	0.791	1
MYH9	20p-Amp	0.791	1
RUFY1	Amp_1q44	0.791	1
SF3B1	Del_11q13.1	0.791	1
TCP11	Amp_1q44	0.791	1
ZMYM3	Del_11q25	0.791	1
Amp_1q21.3	Amp_12q15	0.791	1
Amp_6p23	Del_19q13.32	0.791	1
ARID1A	Del_5q11.2	0.792	1
FBXW7	GATA3	0.792	1
FBXW7	4p-Del	0.792	1
KDM6A	4p-Del	0.792	1
SMAD2	8p-Del	0.792	1
SMAD4	8p-Del	0.792	1
TFE3	8p-Del	0.792	1
ZMYM3	4p-Del	0.792	1
8q-Amp	18p-Del	0.793	1
CBFB	17p-Del	0.794	1
EYS	14q-Del	0.794	1
EYS	Amp_19q12	0.794	1
HRNR	Del_22q13.32	0.794	1
MAP3K1	Del_1p22.1	0.794	1
NCDN	PIK3CA	0.794	1
PIK3CA	RAB42	0.794	1
PIK3CA	USP36	0.794	1
AQP12A	Del_13q14.2	0.795	1
NF1	Amp_3q26.32	0.795	1
SP3	Del_13q14.2	0.795	1
KCNN3	1q-Amp	0.796	1
KDM6A	Del_10q26.3	0.796	1
PIK3CA	RB1	0.796	1
PTEN	Amp_19p13.12	0.796	1
TFE3	Amp_20q13.2	0.796	1
ZMYM3	9p-Del	0.796	1
ZMYM3	Del_10q26.3	0.796	1
MED23	Del_1p22.1	0.797	1
MUC6	Del_1p22.1	0.797	1
PIK3R1	Del_1p22.1	0.797	1
16p-Amp	Del_9q34.2	0.797	1
Amp_10q22.3	Del_21q11.2	0.797	1
Amp_19q12	Del_9p23	0.797	1
AQP12A	17p-Del	0.798	1
AQP12A	Amp_8q24.21	0.798	1
IL1RAP	Del_6q15	0.798	1
RUFY1	Amp_8q24.21	0.798	1
RUNX1	TP53	0.798	1
SP3	17p-Del	0.798	1
TBL1XR1	Del_6q15	0.798	1
EYS	Del_9q21.11	0.799	1
HRNR	20p-Amp	0.799	1
KDM6A	Del_10q23.31	0.799	1
MAP3K1	17q-Amp	0.799	1
NCOR1	17q-Amp	0.799	1
NCOR1	Del_4p16.3	0.799	1
TFE3	Del_16q24.3	0.799	1
5p-Amp	18q-Del	0.799	1
GATA3	Del_6q15	0.8	1
MLL3	6q-Del	0.8	1
MUC6	Del_4p16.3	0.8	1
NCOR1	Del_12p13.1	0.8	1
NF1	Amp_6q21	0.8	1
RBMX	Del_17p12	0.8	1
RUNX1	Amp_13q34	0.8	1
SMAD2	Del_22q13.32	0.8	1
SMAD4	Amp_8p11.21	0.8	1
TBX3	Amp_6q21	0.8	1
TFE3	Del_22q13.32	0.8	1
Amp_8p11.23	Del_7q36.1	0.8	1
CDKN1B	Del_3p21.31	0.801	1
GPS2	Del_3p21.31	0.801	1
GPS2	Del_9p21.3	0.801	1
NF1	16q-Del	0.801	1
ZMYM3	Amp_1q21.3	0.801	1
13q-Del	Amp_13q34	0.801	1
APC	6q-Del	0.802	1
MAP3K1	Del_4p16.3	0.802	1
MYH9	6q-Del	0.802	1
17q-Del	Amp_11q14.1	0.802	1
EYS	MAP3K1	0.803	1
FBXW7	Amp_17q23.1	0.803	1
FRMPD2	Amp_11q13.3	0.803	1
HRNR	Amp_17q12	0.803	1
SPEN	Del_12q23.1	0.803	1
TAF1L	Del_5q21.3	0.803	1
ZMYM3	Amp_17q23.1	0.803	1
7q-Amp	Del_12q23.1	0.803	1
7q-Amp	Del_12q24.31	0.803	1
CBFB	Amp_12q15	0.804	1
KCNN3	13q-Del	0.804	1
NF1	Del_1p22.1	0.804	1
SPEN	Amp_11q13.3	0.804	1
TBL1XR1	13q-Del	0.804	1
TBX3	Del_1p22.1	0.804	1
1p-Del	Amp_19q13.42	0.804	1
Amp_10q22.3	Del_6q15	0.804	1
Amp_15q26.3	Del_1p22.1	0.804	1
EYS	Del_17p12	0.805	1
GATA3	Del_9q34.2	0.805	1
KCNN3	Del_17p12	0.805	1
MED23	8p-Del	0.805	1
CTCF	18q-Del	0.806	1
ERBB2	Del_2q37.3	0.806	1
NF1	Amp_11p13	0.806	1
RB1	Del_2q37.3	0.806	1
SF3B1	18q-Del	0.806	1
TGS1	Del_13q14.2	0.806	1
5p-Amp	18p-Del	0.806	1
NCOR1	8p-Del	0.807	1
PTEN	Del_16q24.3	0.807	1
RUNX1	Amp_1p22.3	0.807	1
16p-Amp	Amp_10p15.1	0.807	1
16p-Amp	Del_11q13.1	0.807	1
C17orf95	Del_11q23.3	0.808	1
KDM6A	22q-Del	0.808	1
PIK3CA	Amp_10q22.3	0.808	1
7p-Amp	Del_11p15.5	0.808	1
Amp_1p22.3	Amp_11q14.1	0.808	1
APC	8p-Amp	0.809	1
CBFB	Del_21q11.2	0.809	1
CTCF	8p-Amp	0.809	1
CTCF	18p-Del	0.809	1
SF3B1	18p-Del	0.809	1
1q-Amp	Del_4q35.1	0.809	1
5p-Amp	Del_11q25	0.809	1
Amp_19q13.42	Del_14q24.1	0.809	1
CDH1	MAP3K1	0.81	1
MED23	20q-Amp	0.81	1
MED23	Amp_11q14.1	0.81	1
MUC6	20q-Amp	0.81	1
MUC6	Amp_11q14.1	0.81	1
PTEN	Del_11p15.5	0.81	1
PTEN	Del_14q24.1	0.81	1
SPEN	8p-Amp	0.81	1
SPEN	Amp_14q21.1	0.81	1
TAF1L	20p-Amp	0.81	1
TAF1L	Del_11q13.1	0.81	1
ZFP36L1	Amp_17q23.1	0.81	1
16p-Amp	Del_21q11.2	0.81	1
Amp_10q22.3	Del_17p12	0.81	1
AQP12A	8q-Amp	0.811	1
CASZ1	Del_11p15.5	0.811	1
CASZ1	Del_14q24.1	0.811	1
CBFB	Amp_17q23.1	0.811	1
CDKN1B	Del_1p36.13	0.811	1
GPS2	Del_1p36.13	0.811	1
KRAS	8q-Amp	0.811	1
RUFY1	8q-Amp	0.811	1
TP53	Amp_11q13.3	0.811	1
EYS	Del_12p13.1	0.812	1
NF1	5q-Del	0.812	1
RUNX1	Amp_3q26.32	0.812	1
8q-Amp	Del_18q23	0.812	1
CTCF	4p-Del	0.813	1
GATA3	MYH9	0.813	1
KDM6A	Amp_3q26.32	0.813	1
MYB	Del_17q21.31	0.813	1
ZMYM3	Amp_3q26.32	0.813	1
17q-Amp	Del_5q11.2	0.813	1
HRNR	Del_12q24.31	0.814	1
PTEN	Amp_17q23.1	0.814	1
5q-Del	Amp_11q13.3	0.814	1
Amp_3q26.32	Del_11q23.3	0.814	1
MED23	Amp_8p11.21	0.815	1
NCOR1	20q-Amp	0.815	1
NCOR1	Amp_11q14.1	0.815	1
PIK3R1	Amp_8p11.21	0.815	1
TBL1XR1	Amp_17q12	0.815	1
1q-Amp	9p-Del	0.815	1
1q-Amp	Del_10q26.3	0.815	1
8p-Amp	Del_18q23	0.815	1
FRMPD2	Del_19p13.3	0.816	1
MYB	Del_18q23	0.816	1
NCDN	Del_8p23.2	0.816	1
SF3B1	9p-Del	0.816	1
TAF1L	Del_16q24.3	0.816	1
ZNF362	Del_8p23.2	0.816	1
5p-Amp	Del_11q23.3	0.816	1
18p-Del	Amp_11p13	0.817	1
Amp_19q12	Del_6q15	0.817	1
FOXA1	Amp_12q15	0.818	1
FOXA1	Del_7q36.1	0.818	1
FOXA1	Del_13q14.2	0.818	1
KDM6A	Del_8p23.2	0.818	1
PTEN	7p-Amp	0.818	1
18q-Del	Amp_19q12	0.818	1
MED23	Del_15q13.1	0.819	1
PTPN22	Del_11q23.3	0.819	1
1q-Amp	Amp_11q14.1	0.819	1
ACTL6B	Del_6q27	0.82	1
ARID1A	Del_6q15	0.82	1
CDKN1B	Del_6q27	0.82	1
HRNR	1p-Del	0.82	1
PTEN	Del_19p13.3	0.82	1
PTPN22	Del_6q27	0.82	1
CDH1	18q-Del	0.821	1
RUNX1	Del_1p22.1	0.821	1
TAF1L	6q-Del	0.821	1
Amp_6p23	Del_11q13.1	0.821	1
FBXW7	Del_4p16.3	0.822	1
KDM6A	Del_4p16.3	0.822	1
NF1	Amp_11q14.1	0.822	1
NF1	Del_6q27	0.822	1
TBX3	20q-Amp	0.822	1
ZMYM3	Del_4p16.3	0.822	1
5p-Amp	Amp_13q34	0.822	1
FOXA1	14q-Del	0.823	1
FOXA1	17q-Del	0.823	1
FOXA1	Amp_8q24.21	0.823	1
GATA3	Del_7q36.1	0.823	1
MAP2K4	Amp_17q12	0.823	1
MLL3	4p-Del	0.823	1
NF1	8p-Del	0.823	1
PTEN	Del_8p23.2	0.823	1
TBX3	8p-Del	0.823	1
7p-Amp	6q-Del	0.823	1
4p-Del	Amp_12q15	0.823	1
Amp_10q22.3	Del_12p13.1	0.823	1
FGFR2	Del_11q25	0.824	1
NLGN3	Del_11q25	0.824	1
ZFP36L1	Del_8p23.2	0.824	1
7q-Amp	Del_10q23.31	0.824	1
RB1	Del_6q27	0.825	1
RUNX1	Del_4p16.3	0.825	1
RUNX1	Del_5q11.2	0.825	1
TAF1L	18q-Del	0.825	1
1q-Amp	22q-Del	0.825	1
7p-Amp	Del_3p21.31	0.825	1
C17orf95	1q-Amp	0.826	1
CTCF	Amp_10p15.1	0.826	1
ERBB2	Del_11q23.3	0.826	1
NF1	16p-Amp	0.826	1
PTEN	Del_6q27	0.826	1
Amp_1q44	Del_6q15	0.826	1
CBFB	Del_12p13.1	0.827	1
RUNX1	Del_1p36.13	0.827	1
Amp_1p22.3	Del_20p13	0.827	1
Amp_1q44	Amp_19q13.42	0.827	1
TAF1L	18p-Del	0.828	1
20q-Amp	Del_12q24.31	0.828	1
Amp_13q34	Amp_17q12	0.828	1
APC	Amp_1p22.3	0.829	1
CASZ1	Amp_8p11.23	0.829	1
FRMPD2	Amp_8p11.23	0.829	1
GATA3	Amp_3p25.1	0.829	1
KDM6A	Amp_8q24.21	0.829	1
NLGN3	11q-Del	0.829	1
RBMX	Amp_8p11.23	0.829	1
SF3B1	Amp_1p22.3	0.829	1
17q-Amp	Amp_11q14.1	0.829	1
CASZ1	Del_9p23	0.83	1
FRMPD2	Del_9p23	0.83	1
KDM6A	16q-Del	0.83	1
MAP2K4	1p-Del	0.83	1
MAP2K4	Amp_14q21.1	0.83	1
1q-Amp	Del_6p25.3	0.83	1
9p-Del	Amp_11p13	0.83	1
Amp_11p13	Del_10q26.3	0.83	1
ARID1A	13q-Del	0.831	1
GPRIN2	Del_9p21.3	0.831	1
GPS2	Del_6q15	0.831	1
IRS4	Del_3p21.31	0.831	1
MED23	1q-Amp	0.831	1
NLGN3	Del_9p21.3	0.831	1
PIK3CA	4q-Del	0.831	1
ZMYM3	20q-Amp	0.831	1
14q-Del	Amp_15q26.3	0.831	1
CTCF	Amp_17q23.1	0.832	1
HRNR	Amp_13q34	0.832	1
MAP3K1	Amp_19p13.12	0.832	1
PTEN	Amp_6p23	0.832	1
5p-Amp	13q-Del	0.832	1
8q-Amp	Del_22q13.32	0.832	1
17p-Del	Amp_1p22.3	0.832	1
Amp_6q21	Amp_8p11.23	0.832	1
Amp_19q12	Del_9p21.3	0.832	1
APC	Amp_3q26.32	0.833	1
GATA3	17q-Del	0.833	1
SPEN	5p-Amp	0.833	1
SPEN	Amp_6q21	0.833	1
SPEN	Amp_10p15.1	0.833	1
8q-Amp	9q-Del	0.833	1
EYS	11p-Del	0.834	1
HRNR	9p-Del	0.834	1
MED23	Del_14q24.1	0.834	1
NF1	Del_15q13.1	0.834	1
PIK3R1	Del_11p15.5	0.834	1
PIK3R1	Del_14q24.1	0.834	1
SMAD4	Amp_8p11.23	0.834	1
TPP2	8p-Del	0.834	1
16p-Amp	17q-Amp	0.834	1
FOXA1	Amp_17q23.1	0.835	1
FBXW7	8p-Del	0.836	1
KDM6A	8p-Del	0.836	1
SP3	Del_11q25	0.836	1
1q-Amp	Del_6q27	0.836	1
Amp_15q26.3	Del_11q13.1	0.836	1
CDKN1B	13q-Del	0.837	1
PIK3R1	Amp_11q13.3	0.837	1
PTPN22	13q-Del	0.837	1
16q-Del	Del_4p16.3	0.837	1
Amp_12q15	Del_10q23.31	0.837	1
ARID1A	Del_11p15.5	0.838	1
ARID1A	Del_14q24.1	0.838	1
CDH1	17p-Del	0.838	1
FBXW7	Del_11q23.3	0.838	1
KDM6A	Del_11q23.3	0.838	1
TAF1L	Del_10q23.31	0.838	1
USP36	Amp_20q13.2	0.838	1
Amp_19p13.12	Del_6q15	0.838	1
APC	Del_1p22.1	0.839	1
CTCF	Del_1p22.1	0.839	1
ERBB2	Amp_8p11.23	0.839	1
MED23	Del_19p13.3	0.839	1
SF3B1	Del_1p22.1	0.839	1
16q-Del	5q-Del	0.839	1
KDM6A	Del_4q35.1	0.84	1
KDM6A	Del_15q13.1	0.84	1
RB1	Del_6q15	0.84	1
RBMX	Del_18q23	0.84	1
TBX3	Del_6q15	0.84	1
ZMYM3	Del_15q13.1	0.84	1
9p-Del	Amp_19q12	0.84	1
Amp_11q13.3	Del_15q13.1	0.84	1
ARID1A	15q-Del	0.841	1
ERBB2	Del_8p23.2	0.841	1
KDM6A	Amp_20q13.2	0.841	1
MUC6	Del_17p12	0.841	1
NCOR1	Del_3p21.31	0.841	1
RUNX1	Del_6q27	0.841	1
ZMYM3	Amp_20q13.2	0.841	1
17q-Amp	11p-Del	0.841	1
1q-Amp	Amp_19p13.12	0.841	1
APC	Del_5q11.2	0.842	1
CTCF	Del_4p16.3	0.842	1
CTCF	Del_5q11.2	0.842	1
MAP2K4	Amp_13q34	0.842	1
RUNX1	Del_11q23.3	0.842	1
SF3B1	Del_4p16.3	0.842	1
SPEN	Amp_3q26.32	0.842	1
1q-Amp	Del_11q25	0.842	1
9p-Del	Amp_1q21.3	0.842	1
RAB42	Del_16q24.3	0.843	1
ACTL6B	1q-Amp	0.844	1
GATA3	Amp_8p11.23	0.844	1
MLL3	Del_1p36.13	0.844	1
PIK3CA	15q-Del	0.844	1
RB1	20p-Amp	0.844	1
RUNX1	Amp_15q26.3	0.844	1
SPEN	5q-Del	0.844	1
16p-Amp	Del_1p22.1	0.844	1
17q-Amp	17p-Del	0.844	1
17q-Amp	Del_15q13.1	0.844	1
7q-Amp	11q-Del	0.844	1
16q-Del	Amp_6p23	0.844	1
Amp_11p13	Del_22q13.32	0.844	1
FBXW7	Amp_8p11.21	0.845	1
FBXW7	Del_22q13.32	0.845	1
KDM6A	Del_22q13.32	0.845	1
PTPN22	Amp_1q21.3	0.845	1
ZMYM3	Del_22q13.32	0.845	1
20p-Amp	Del_16q24.3	0.845	1
20q-Amp	Del_12p13.1	0.845	1
FRMPD2	17p-Del	0.846	1
PIK3CA	Amp_6q21	0.846	1
RBMX	17p-Del	0.846	1
TBL1XR1	Amp_17q23.1	0.846	1
ZFP36L2	17p-Del	0.846	1
8p-Amp	Del_19q13.32	0.846	1
CDKN1B	Amp_17q12	0.847	1
GPS2	Amp_17q12	0.847	1
MAP2K4	9p-Del	0.847	1
ERBB2	13q-Del	0.848	1
FGFR2	Del_6q27	0.848	1
GPRIN2	Del_6q27	0.848	1
KCNN3	PIK3CA	0.848	1
NLGN3	Del_6q27	0.848	1
PIK3CA	VCPIP1	0.848	1
RB1	13q-Del	0.848	1
SPEN	Del_9p21.3	0.848	1
7q-Amp	Del_3p21.31	0.848	1
APC	Amp_1q21.3	0.849	1
HRNR	Amp_11p13	0.849	1
SF3B1	Amp_1q21.3	0.849	1
SPEN	22q-Del	0.849	1
7p-Amp	Del_21q11.2	0.849	1
1p-Del	Amp_15q26.3	0.849	1
APC	20q-Amp	0.85	1
CTCF	Amp_11q14.1	0.85	1
EYS	Del_16q24.3	0.85	1
KCNN3	22q-Del	0.85	1
MYH9	20q-Amp	0.85	1
MYH9	Amp_11q14.1	0.85	1
NF1	13q-Del	0.85	1
RUNX1	Del_4q35.1	0.85	1
VCPIP1	22q-Del	0.85	1
1q-Amp	9q-Del	0.85	1
7q-Amp	Del_1p22.1	0.85	1
4q-Del	Amp_8p11.23	0.85	1
Amp_17q23.1	Del_16q24.3	0.85	1
GATA3	MAP3K1	0.851	1
HRNR	Amp_1p22.3	0.851	1
MAP2K4	Del_10q23.31	0.851	1
MAP3K1	4p-Del	0.851	1
PTEN	Del_12q23.1	0.851	1
7p-Amp	Amp_4q13.3	0.851	1
7p-Amp	Del_10q23.31	0.851	1
GATA3	4p-Del	0.852	1
MAP2K4	5p-Amp	0.852	1
MAP3K1	Amp_3p25.1	0.852	1
NF1	15q-Del	0.852	1
NF1	9q-Del	0.852	1
PIK3R1	Del_9p23	0.852	1
TBX3	15q-Del	0.852	1
TBX3	9q-Del	0.852	1
TBX3	Del_20p13	0.852	1
Amp_3p25.1	Amp_10q22.3	0.852	1
APC	16p-Amp	0.853	1
ERBB2	Del_13q14.2	0.853	1
MYH9	16p-Amp	0.853	1
5p-Amp	Del_3p21.31	0.853	1
MYB	11q-Del	0.854	1
RB1	6q-Del	0.854	1
ZMYM3	Del_11p15.5	0.854	1
20q-Amp	Amp_1q21.3	0.854	1
7q-Amp	Del_4p16.3	0.854	1
1q-Amp	17q-Del	0.855	1
6q-Del	Amp_15q26.3	0.855	1
GATA3	Amp_17q12	0.856	1
MAP3K1	Del_3p21.31	0.856	1
MAP3K1	Del_9p21.3	0.856	1
MLL3	9q-Del	0.856	1
TAF1L	Del_1p22.1	0.856	1
16p-Amp	8p-Del	0.856	1
17q-Amp	Del_3p21.31	0.856	1
AQP12A	16q-Del	0.857	1
HRNR	Del_11q25	0.857	1
KRAS	16q-Del	0.857	1
MLL3	Amp_1p22.3	0.857	1
PIK3CA	17q-Del	0.857	1
RUNX1	Amp_8p11.21	0.857	1
SP3	16q-Del	0.857	1
ZFP36L2	8q-Amp	0.857	1
ACTL6B	Amp_1q44	0.858	1
ERBB2	18q-Del	0.858	1
FGFR2	Del_6q15	0.858	1
MAP2K4	Amp_11p13	0.858	1
MLL3	Del_19p13.3	0.858	1
NLGN3	Del_6q15	0.858	1
PTEN	1q-Amp	0.858	1
15q-Del	Amp_11q13.3	0.858	1
APC	Del_15q13.1	0.859	1
ARID1A	Amp_19q12	0.859	1
CDH1	15q-Del	0.859	1
CDKN1B	TP53	0.859	1
CTCF	Del_4q35.1	0.859	1
EYS	Amp_6p23	0.859	1
GPS2	TP53	0.859	1
MED23	Del_17q21.31	0.859	1
MYH9	Del_15q13.1	0.859	1
SF3B1	Del_4q35.1	0.859	1
SF3B1	Del_15q13.1	0.859	1
TAF1L	Del_5q11.2	0.859	1
16p-Amp	Del_11p15.5	0.859	1
6q-Del	Amp_10p15.1	0.859	1
CBFB	Amp_8p11.21	0.86	1
CDH1	16p-Amp	0.86	1
HRNR	11q-Del	0.86	1
MUC6	Amp_8p11.23	0.86	1
MYB	Del_11q25	0.86	1
NF1	Del_19p13.3	0.86	1
NLGN3	Del_11q23.3	0.86	1
RBMX	Amp_1q44	0.86	1
20p-Amp	Del_14q24.1	0.86	1
8q-Amp	Del_3p21.31	0.86	1
Amp_10q22.3	Del_22q13.32	0.86	1
ERBB2	18p-Del	0.861	1
HRNR	Amp_17q23.1	0.861	1
RB1	18p-Del	0.861	1
Amp_19q13.42	Del_1p22.1	0.861	1
CTCF	8p-Del	0.862	1
MUC6	Del_18q23	0.862	1
NCOR1	Del_19p13.3	0.862	1
SP3	Del_11q23.3	0.862	1
ARID1A	Amp_12p13.33	0.863	1
HRNR	Amp_8p11.23	0.863	1
NF1	Amp_11q13.3	0.863	1
PTEN	8p-Del	0.863	1
RUNX1	Del_20p13	0.863	1
SF3B1	16q-Del	0.863	1
16p-Amp	Del_13q14.2	0.863	1
20p-Amp	16p-Del	0.863	1
14q-Del	Amp_17q23.1	0.863	1
22q-Del	Amp_11p13	0.863	1
ERBB2	4p-Del	0.864	1
FOXA1	Del_2q37.3	0.864	1
GPRIN2	13q-Del	0.864	1
IRS4	13q-Del	0.864	1
APC	Amp_1q44	0.865	1
CTCF	Amp_1q44	0.865	1
GPS2	Amp_8q24.21	0.865	1
NF1	Del_7q36.1	0.865	1
TBX3	Del_7q36.1	0.865	1
Amp_1p22.3	Del_17q21.31	0.865	1
Amp_11p13	Del_9p21.3	0.865	1
EYS	Del_6q27	0.866	1
NCOR1	TP53	0.866	1
TBX3	Amp_17q12	0.866	1
5p-Amp	Del_16q24.3	0.866	1
17q-Del	Amp_1p22.3	0.866	1
Amp_4q13.3	Del_14q24.1	0.866	1
Amp_6q21	Del_16q24.3	0.866	1
HRNR	22q-Del	0.867	1
HRNR	Del_4p16.3	0.867	1
HRNR	Del_5q11.2	0.867	1
MYH9	Amp_20q13.2	0.867	1
TAF1L	Amp_11q14.1	0.867	1
18q-Del	Amp_10p15.1	0.867	1
IL1RAP	8p-Del	0.868	1
RUNX1	Del_14q24.1	0.868	1
SPEN	Del_8p23.2	0.868	1
8p-Amp	Del_4q35.1	0.868	1
TBX3	Del_21q11.2	0.869	1
CDH1	HRNR	0.87	1
PIK3CA	18q-Del	0.87	1
16p-Amp	Amp_19p13.12	0.87	1
IL1RAP	Amp_20q13.2	0.871	1
MED23	Del_13q14.2	0.871	1
TBX3	Amp_8q24.21	0.871	1
TPP2	Amp_8p11.23	0.871	1
USP36	Amp_8p11.23	0.871	1
ZMYM3	Del_9p23	0.871	1
1q-Amp	Amp_12p13.33	0.871	1
APC	Del_14q24.1	0.872	1
CDH1	Del_6q27	0.872	1
MYH9	Del_14q24.1	0.872	1
SF3B1	Del_11p15.5	0.872	1
TGS1	Del_6q27	0.872	1
7p-Amp	Amp_19p13.12	0.872	1
NF1	Amp_12p13.33	0.873	1
6q-Del	Amp_3q26.32	0.873	1
Amp_12p13.33	Amp_17q12	0.873	1
MYH9	Amp_8q24.21	0.874	1
RUNX1	Del_19p13.3	0.874	1
TBL1XR1	Amp_8p11.21	0.874	1
VCPIP1	Del_22q13.32	0.874	1
16p-Amp	Del_19p13.3	0.874	1
18p-Del	Amp_10p15.1	0.874	1
Amp_1p22.3	Amp_17q23.1	0.874	1
CDKN1B	Amp_17q23.1	0.875	1
MAP2K4	Del_1p22.1	0.875	1
MUC6	17p-Del	0.875	1
TAF1L	Del_15q13.1	0.875	1
CDH1	11p-Del	0.876	1
CDH1	22q-Del	0.876	1
FOXA1	Amp_20q13.2	0.876	1
MAP3K1	15q-Del	0.876	1
MAP3K1	Del_20p13	0.876	1
SF3B1	Del_19p13.3	0.876	1
SPEN	Del_4q35.1	0.876	1
Amp_1q44	Amp_8q24.21	0.876	1
GATA3	Del_13q14.2	0.877	1
MAP3K1	Del_1p36.13	0.877	1
MLL3	Amp_8p11.23	0.877	1
NF1	4q-Del	0.877	1
NF1	Del_8p23.2	0.877	1
PTEN	Amp_19q13.42	0.877	1
TBX3	Del_8p23.2	0.877	1
ZNF362	Amp_1q21.3	0.877	1
AQP12A	1q-Amp	0.878	1
CASZ1	Del_3p21.31	0.878	1
CASZ1	Del_9p21.3	0.878	1
CDH1	Del_7p22.3	0.878	1
ERBB2	Amp_1p22.3	0.878	1
FRMPD2	Del_3p21.31	0.878	1
HRNR	20q-Amp	0.878	1
NF1	TP53	0.878	1
PIK3CA	Del_4q35.1	0.878	1
RBMX	Del_9p21.3	0.878	1
RUFY1	1q-Amp	0.878	1
TBX3	TP53	0.878	1
1q-Amp	Del_11q13.1	0.878	1
20q-Amp	16q-Del	0.878	1
NCOR1	Amp_14q21.1	0.879	1
RUNX1	Amp_19q12	0.879	1
RUNX1	Del_21q11.2	0.879	1
TPP2	Del_13q14.2	0.879	1
CDC42EP1	Del_8p23.2	0.88	1
FBXW7	Del_18q23	0.88	1
MLL3	Del_4p16.3	0.88	1
SPEN	Amp_8q24.21	0.88	1
17q-Amp	Del_12q23.1	0.88	1
Amp_4q13.3	Del_12q24.31	0.88	1
HRNR	16p-Amp	0.881	1
MAP2K4	Amp_15q26.3	0.881	1
7q-Amp	Del_20p13	0.881	1
CBFB	Amp_11q13.3	0.882	1
MYB	Del_6q15	0.882	1
RUNX1	Amp_11q13.3	0.882	1
RUNX1	Amp_17q12	0.882	1
SPEN	8p-Del	0.882	1
TPP2	17p-Del	0.882	1
1q-Amp	Del_7p22.3	0.882	1
5p-Amp	Amp_6p23	0.882	1
Amp_17q12	Del_12q24.31	0.882	1
CBFB	Del_6q27	0.883	1
RUNX1	Amp_12p13.33	0.883	1
SP3	Del_17p12	0.883	1
14q-Del	Amp_12q15	0.883	1
CBFB	Del_11q13.1	0.884	1
PAX2	Amp_1q44	0.884	1
ZNF362	Amp_1q44	0.884	1
1q-Amp	Del_17p12	0.884	1
CDH1	Amp_12q15	0.885	1
CDH1	Del_7q36.1	0.885	1
FBXW7	Amp_8p11.23	0.885	1
TBX3	Del_12p13.1	0.885	1
ZMYM3	Amp_8p11.23	0.885	1
CASZ1	Del_1p36.13	0.886	1
EYS	13q-Del	0.886	1
EYS	Amp_8p11.23	0.886	1
MUC6	PIK3CA	0.886	1
MYB	16q-Del	0.886	1
PIK3CA	PIK3R1	0.886	1
RBMX	Del_1p36.13	0.886	1
CBFB	Amp_8q24.21	0.887	1
EYS	8p-Amp	0.887	1
GATA3	16p-Del	0.887	1
MAP3K1	RUNX1	0.887	1
PTEN	8q-Amp	0.887	1
SP3	TP53	0.887	1
TAF1L	Del_11p15.5	0.887	1
TBL1XR1	Amp_11q13.3	0.887	1
16q-Del	Amp_4q13.3	0.887	1
MED23	Amp_1q21.3	0.888	1
MYH9	Del_9p23	0.888	1
TAF1L	Amp_1q21.3	0.888	1
ZNF362	Amp_8q24.21	0.888	1
8p-Amp	Del_17q21.31	0.888	1
9p-Del	Amp_10p15.1	0.888	1
Amp_1q44	Amp_12q15	0.888	1
Amp_1q44	Del_9p23	0.888	1
Amp_19q12	Del_12q24.31	0.888	1
GATA3	Del_12q23.1	0.889	1
MED23	8q-Amp	0.889	1
MLL3	Del_6q15	0.889	1
NCOR1	Amp_13q34	0.889	1
NLGN3	Del_17p12	0.889	1
PIK3R1	8q-Amp	0.889	1
TBX3	Del_18q23	0.889	1
17q-Del	Amp_19q12	0.889	1
EYS	GATA3	0.89	1
EYS	4p-Del	0.89	1
FOXA1	Del_5q21.3	0.89	1
FRMPD2	Del_11q25	0.89	1
RBMX	Del_11q25	0.89	1
Amp_12p13.33	Del_1p22.1	0.89	1
CDH1	RB1	0.891	1
RUNX1	Del_17p12	0.891	1
TBX3	Amp_8p11.23	0.891	1
TBX3	Del_6p25.3	0.891	1
16q-Del	Amp_11p13	0.891	1
HRNR	Del_8p23.2	0.892	1
MYB	Del_11q23.3	0.892	1
SPEN	Del_14q24.1	0.892	1
Amp_19q13.42	Del_5q21.3	0.892	1
FRMPD2	Del_6q27	0.893	1
SPEN	Del_7q36.1	0.893	1
SPEN	Del_22q13.32	0.893	1
16p-Amp	Amp_17q23.1	0.893	1
7q-Amp	Del_7q36.1	0.893	1
11q-Del	Amp_10p15.1	0.893	1
CDKN1B	8p-Del	0.894	1
GPS2	8p-Del	0.894	1
1q-Del	8p-Del	0.894	1
9p-Del	Amp_1p22.3	0.894	1
ARID1A	Del_2q37.3	0.895	1
MAP3K1	Amp_12q15	0.895	1
MAP3K1	Del_7q36.1	0.895	1
MED23	11q-Del	0.895	1
MUC6	11q-Del	0.895	1
MYB	Amp_17q12	0.895	1
TP53	Amp_1q21.3	0.895	1
14q-Del	Amp_14q21.1	0.895	1
Amp_1q44	Del_17q21.31	0.895	1
CBFB	18q-Del	0.896	1
CTCF	Del_18q23	0.896	1
MYH9	Del_18q23	0.896	1
RB1	20q-Amp	0.896	1
RB1	Amp_11q14.1	0.896	1
SF3B1	Del_18q23	0.896	1
SPEN	14q-Del	0.896	1
SPEN	Del_21q11.2	0.896	1
ZMYM3	Del_13q14.2	0.896	1
7q-Amp	14q-Del	0.896	1
7q-Amp	Del_21q11.2	0.896	1
ACTL6B	Amp_20q13.2	0.897	1
MAP2K4	9q-Del	0.897	1
MAP2K4	Del_20p13	0.897	1
Amp_1p22.3	Amp_15q26.3	0.897	1
FOXA1	Del_6q27	0.898	1
HRNR	8p-Del	0.898	1
MAP2K4	Del_4q35.1	0.898	1
NCOR1	5p-Amp	0.898	1
NCOR1	13q-Del	0.898	1
NCOR1	Amp_6q21	0.898	1
SPEN	Del_19p13.3	0.898	1
Amp_1q44	Del_9p21.3	0.898	1
Amp_3q26.32	Del_6q27	0.898	1
MLL3	Del_17q21.31	0.899	1
NLGN3	Amp_17q23.1	0.899	1
PTEN	Amp_3q26.32	0.899	1
16q-Del	Del_10q23.31	0.899	1
CDH1	Del_6q15	0.9	1
CDKN1B	Amp_8p11.21	0.9	1
MED23	Amp_1q44	0.9	1
PTEN	Amp_11q13.3	0.9	1
SF3B1	Del_16q24.3	0.9	1
SPEN	Amp_12p13.33	0.9	1
1q-Amp	Del_11q23.3	0.9	1
HRNR	Amp_12q15	0.901	1
IL1RAP	Amp_8p11.23	0.901	1
TBL1XR1	Amp_8p11.23	0.901	1
TBX3	Del_9q34.2	0.901	1
5p-Amp	Del_11q13.1	0.901	1
Amp_10q22.3	Amp_13q34	0.901	1
CDH1	Del_22q13.32	0.902	1
ERBB2	Del_4q35.1	0.902	1
IRS4	Amp_1q44	0.902	1
NCOR1	8p-Amp	0.902	1
NCOR1	18p-Del	0.902	1
NLGN3	Amp_1q44	0.902	1
17q-Amp	Del_17q21.31	0.902	1
1q-Amp	Amp_13q34	0.902	1
22q-Del	Amp_10q22.3	0.902	1
CBFB	9p-Del	0.903	1
FOXA1	6q-Del	0.903	1
MAP3K1	SPEN	0.903	1
MED23	Del_1p36.13	0.903	1
6q-Del	Amp_4q13.3	0.903	1
HRNR	17q-Del	0.904	1
MAP3K1	Amp_14q21.1	0.904	1
NF1	Del_2q37.3	0.904	1
20q-Amp	Del_19q13.32	0.904	1
5q-Del	Del_16q24.3	0.904	1
Amp_1q44	Amp_15q26.3	0.904	1
CBFB	Del_11q23.3	0.905	1
GATA3	Del_1p22.1	0.905	1
GATA3	Del_11p15.5	0.905	1
17q-Amp	Del_18q23	0.905	1
Amp_1p22.3	Del_11q23.3	0.905	1
NCOR1	5q-Del	0.906	1
PIK3CA	7q-Amp	0.906	1
5p-Amp	Del_6q15	0.906	1
14q-Del	Amp_11q13.3	0.906	1
9q-Del	Amp_11p13	0.906	1
AQP12A	PIK3CA	0.907	1
CTCF	Amp_8p11.23	0.907	1
ERBB2	Del_11q25	0.907	1
FGFR2	Amp_8q24.21	0.907	1
IRS4	Amp_8q24.21	0.907	1
MYH9	Amp_8p11.23	0.907	1
NCOR1	Del_13q14.2	0.907	1
NLGN3	Amp_8q24.21	0.907	1
PIK3CA	11q-Del	0.907	1
16p-Amp	Del_3p21.31	0.907	1
16p-Amp	Del_9p21.3	0.907	1
16p-Amp	Del_19q13.32	0.907	1
GATA3	Del_6q27	0.908	1
IL1RAP	Del_13q14.2	0.908	1
KCNN3	Del_13q14.2	0.908	1
MAP3K1	Del_9p23	0.908	1
NCOR1	9p-Del	0.908	1
TBL1XR1	Del_13q14.2	0.908	1
1q-Amp	Del_15q13.1	0.908	1
Amp_8p11.21	Amp_15q26.3	0.908	1
Amp_19p13.12	Del_16q24.3	0.908	1
APC	TP53	0.909	1
MLL3	Del_15q13.1	0.909	1
RUNX1	Del_9q34.2	0.909	1
7q-Amp	Amp_17q12	0.909	1
CDKN1B	Del_8p23.2	0.91	1
FBXW7	11q-Del	0.91	1
GPS2	Del_8p23.2	0.91	1
KCNN3	17p-Del	0.91	1
ZMYM3	11q-Del	0.91	1
7q-Amp	Del_12p13.1	0.91	1
CBFB	Amp_10p15.1	0.911	1
CDKN1B	Amp_11q13.3	0.911	1
FOXA1	GATA3	0.911	1
FOXA1	4p-Del	0.911	1
GPS2	Amp_11q13.3	0.911	1
MAP2K4	14q-Del	0.911	1
MAP2K4	Amp_19q12	0.911	1
NCOR1	Del_10q23.31	0.911	1
6q-Del	Amp_10q22.3	0.911	1
PIK3CA	Del_18q23	0.912	1
SPEN	Del_9p23	0.912	1
17q-Amp	5q-Del	0.912	1
RB1	Del_11p15.5	0.913	1
RBMX	Amp_17q12	0.913	1
6q-Del	Amp_6q21	0.913	1
MAP2K4	Amp_12p13.33	0.914	1
MAP2K4	Del_9q21.11	0.914	1
NF1	Del_11q23.3	0.914	1
TBX3	Del_11q23.3	0.914	1
1q-Amp	Del_19q13.32	0.914	1
5p-Amp	Del_7q36.1	0.914	1
5p-Amp	Del_11p15.5	0.914	1
4q-Del	Amp_1q21.3	0.914	1
CBFB	Del_13q14.2	0.915	1
MAP3K1	Del_6q15	0.915	1
Amp_8p11.23	Amp_15q26.3	0.915	1
MYH9	Del_13q14.2	0.916	1
SPEN	Del_6p25.3	0.916	1
ERBB2	Del_19p13.3	0.917	1
EYS	Amp_1q21.3	0.917	1
MAP2K4	MAP3K1	0.917	1
MAP2K4	4q-Del	0.917	1
MLL3	8p-Amp	0.917	1
MLL3	18p-Del	0.917	1
NCOR1	Amp_8p11.21	0.917	1
PTEN	Del_20p13	0.917	1
ARID1A	Del_5q21.3	0.918	1
FBXW7	Del_1p36.13	0.918	1
GPRIN2	Amp_20q13.2	0.918	1
MYB	Amp_17q23.1	0.918	1
TGS1	Amp_17q23.1	0.918	1
SF3B1	17p-Del	0.919	1
SPEN	Del_17q21.31	0.919	1
17q-Amp	Del_10q23.31	0.919	1
7q-Amp	Del_17q21.31	0.919	1
Amp_15q26.3	Del_16q24.3	0.919	1
ERBB2	8p-Del	0.92	1
FOXA1	Amp_10p15.1	0.92	1
GATA3	Amp_10q22.3	0.92	1
PIK3CA	Amp_11q14.1	0.92	1
RB1	8p-Del	0.92	1
8q-Amp	4p-Del	0.92	1
6q-Del	Amp_12p13.33	0.92	1
18p-Del	Amp_6q21	0.921	1
1p-Del	Del_6p25.3	0.921	1
Amp_14q21.1	Del_6p25.3	0.921	1
ARID1A	Del_11q13.1	0.922	1
KRAS	Del_8p23.2	0.922	1
MAP3K1	11q-Del	0.922	1
PTEN	22q-Del	0.922	1
RUFY1	Del_8p23.2	0.922	1
SMAD4	TP53	0.922	1
16p-Amp	Del_14q24.1	0.922	1
8p-Del	Amp_1q44	0.922	1
Amp_13q34	Del_7p22.3	0.922	1
ERBB2	Amp_20q13.2	0.923	1
PTPN22	Amp_8p11.23	0.923	1
RB1	Amp_20q13.2	0.923	1
20p-Amp	Del_12p13.1	0.923	1
6q-Del	Del_4q35.1	0.923	1
APC	11q-Del	0.924	1
FBXW7	Del_6q27	0.924	1
FOXA1	Amp_3q26.32	0.924	1
MAP3K1	Del_18q23	0.924	1
MLL3	5q-Del	0.924	1
PIK3CA	Amp_19p13.12	0.924	1
ZMYM3	Del_6q27	0.924	1
Amp_13q34	Del_12p13.1	0.924	1
APC	Del_9p21.3	0.925	1
CTCF	Del_9p21.3	0.925	1
MAP3K1	6q-Del	0.925	1
MYH9	Del_9p21.3	0.925	1
NF1	Del_5q21.3	0.925	1
4q-Del	Amp_11q13.3	0.925	1
CDH1	Del_10q23.31	0.926	1
GATA3	14q-Del	0.926	1
MAP3K1	Amp_19q13.42	0.926	1
NF1	11q-Del	0.926	1
RB1	Amp_8p11.21	0.926	1
7q-Amp	Del_2q37.3	0.926	1
5q-Del	Amp_1q44	0.926	1
Amp_1q21.3	Del_17q21.31	0.926	1
Amp_19q12	Del_1p36.13	0.926	1
CBFB	Amp_11q14.1	0.927	1
PTEN	Del_7q36.1	0.927	1
14q-Del	Amp_17q12	0.927	1
Amp_1p22.3	Amp_4q13.3	0.927	1
Amp_10q22.3	Del_16q24.3	0.927	1
Amp_11q14.1	Del_12p13.1	0.927	1
MED23	Amp_17q12	0.928	1
MLL3	11p-Del	0.928	1
MLL3	Del_9q34.2	0.928	1
MLL3	Del_14q24.1	0.928	1
8q-Amp	22q-Del	0.928	1
Amp_3p25.1	Del_11q13.1	0.928	1
Amp_4q13.3	Del_22q13.32	0.928	1
CDKN1B	Del_13q14.2	0.929	1
CTCF	8q-Amp	0.929	1
MAP2K4	Del_9p23	0.929	1
PTEN	Amp_19q12	0.929	1
PTEN	Del_21q11.2	0.929	1
5p-Amp	11q-Del	0.929	1
5p-Amp	Del_7p22.3	0.929	1
FOXA1	Del_4p16.3	0.93	1
FOXA1	Del_5q11.2	0.93	1
GATA3	Amp_11p13	0.93	1
MAP3K1	Del_13q14.2	0.93	1
APC	Del_1p36.13	0.931	1
ERBB2	Del_17q21.31	0.931	1
FBXW7	Del_6q15	0.931	1
KDM6A	Del_6q15	0.931	1
MAP3K1	Amp_11p13	0.931	1
MYH9	Del_1p36.13	0.931	1
RB1	16q-Del	0.931	1
1q-Amp	17p-Del	0.931	1
11p-Del	Amp_14q21.1	0.931	1
Amp_12q15	Del_16q24.3	0.931	1
Amp_14q21.1	Del_9q34.2	0.931	1
C17orf95	Amp_1q44	0.932	1
ERBB2	Del_18q23	0.932	1
MLL3	16p-Del	0.932	1
CBFB	Del_4q35.1	0.933	1
CBFB	Del_15q13.1	0.933	1
KDM6A	Del_11q25	0.933	1
NCOR1	9q-Del	0.933	1
1q-Amp	8p-Del	0.933	1
Amp_10p15.1	Del_11q23.3	0.933	1
MAP3K1	Del_11q23.3	0.934	1
16q-Del	Amp_17q12	0.934	1
Amp_11q13.3	Amp_15q26.3	0.934	1
Amp_11q13.3	Del_14q24.1	0.934	1
ARID1A	4p-Del	0.935	1
MYB	Amp_20q13.2	0.935	1
PIK3CA	11p-Del	0.935	1
17p-Del	Amp_10q22.3	0.935	1
FRMPD2	22q-Del	0.936	1
GATA3	Del_10q23.31	0.936	1
MAP2K4	11p-Del	0.936	1
MAP2K4	Del_9q34.2	0.936	1
NF1	Del_1p36.13	0.936	1
NLGN3	Del_8p23.2	0.936	1
RUNX1	20p-Amp	0.936	1
RUNX1	8q-Amp	0.936	1
TBX3	6q-Del	0.936	1
Amp_8q24.21	Del_16q24.3	0.936	1
ARID1A	9p-Del	0.937	1
MAP2K4	Amp_11q13.3	0.937	1
MED23	Del_11q23.3	0.937	1
MYB	Amp_8q24.21	0.937	1
RUNX1	Del_9p21.3	0.937	1
Amp_1q21.3	Del_10q23.31	0.937	1
CDKN1B	8q-Amp	0.938	1
FRMPD2	Del_17p12	0.938	1
GPS2	8q-Amp	0.938	1
KRAS	Del_16q24.3	0.938	1
MAP3K1	Amp_20q13.2	0.938	1
PIK3CA	SMAD4	0.938	1
TBX3	18q-Del	0.938	1
22q-Del	Amp_3q26.32	0.938	1
20p-Amp	22q-Del	0.939	1
20p-Amp	Del_19q13.32	0.939	1
1p-Del	Del_12q24.31	0.939	1
Amp_14q21.1	Del_12q23.1	0.939	1
Amp_14q21.1	Del_12q24.31	0.939	1
CDH1	Amp_8p11.23	0.94	1
MAP3K1	Amp_17q23.1	0.94	1
NF1	8p-Amp	0.94	1
FOXA1	Del_4q35.1	0.941	1
FOXA1	Del_15q13.1	0.941	1
GATA3	Amp_11q13.3	0.941	1
KDM6A	Amp_17q12	0.941	1
MLL3	Amp_15q26.3	0.941	1
PIK3CA	Del_11q13.1	0.941	1
SPEN	Amp_17q23.1	0.941	1
1q-Amp	Del_17q21.31	0.941	1
Amp_11p13	Del_9p23	0.941	1
APC	Del_6q15	0.942	1
MYH9	Del_6q15	0.942	1
NF1	4p-Del	0.942	1
PTEN	Del_6q15	0.942	1
17p-Del	Amp_1q21.3	0.942	1
Amp_1q44	Del_8p23.2	0.942	1
Amp_19q13.42	Del_1p36.13	0.942	1
ARID1A	Amp_10p15.1	0.943	1
PIK3CA	Del_3p21.31	0.943	1
CBFB	Del_19p13.3	0.944	1
GATA3	Del_7p22.3	0.944	1
MLL3	Del_11q23.3	0.944	1
NCOR1	14q-Del	0.944	1
NCOR1	Del_21q11.2	0.944	1
TBX3	9p-Del	0.944	1
TBX3	Del_10q26.3	0.944	1
Amp_12p13.33	Del_6q27	0.944	1
CDH1	Amp_10q22.3	0.945	1
PTEN	Del_6p25.3	0.945	1
RUNX1	Amp_20q13.2	0.945	1
TBX3	Del_10q23.31	0.945	1
7p-Amp	Amp_17q23.1	0.945	1
APC	13q-Del	0.946	1
GPRIN2	Del_13q14.2	0.946	1
KCNN3	16q-Del	0.946	1
MED23	Amp_17q23.1	0.946	1
MYH9	13q-Del	0.946	1
NCOR1	Amp_12p13.33	0.946	1
TP53	ZFP36L1	0.946	1
16p-Amp	11q-Del	0.946	1
Amp_4q13.3	Del_7q36.1	0.946	1
APC	Del_11q25	0.947	1
FRMPD2	8p-Del	0.947	1
NCOR1	Del_1p36.13	0.947	1
20p-Amp	Del_22q13.32	0.947	1
Amp_1q21.3	Amp_20q13.2	0.947	1
Amp_1q21.3	Del_9p21.3	0.947	1
FOXA1	Del_14q24.1	0.948	1
MLL3	Del_1p22.1	0.948	1
17q-Amp	14q-Del	0.948	1
1q-Amp	5q-Del	0.948	1
1q-Amp	Del_20p13	0.948	1
20q-Amp	Amp_13q34	0.948	1
CASZ1	Amp_1q21.3	0.949	1
EYS	Amp_8p11.21	0.949	1
EYS	Del_22q13.32	0.949	1
NCOR1	Del_8p23.2	0.949	1
NF1	Del_11q25	0.949	1
RUNX1	9p-Del	0.949	1
SMAD2	Del_8p23.2	0.949	1
VCPIP1	Del_11q23.3	0.949	1
5p-Amp	11p-Del	0.949	1
MLL3	Amp_10q22.3	0.95	1
MUC6	1q-Amp	0.95	1
PTEN	Del_22q13.32	0.95	1
RBMX	Del_22q13.32	0.95	1
TP53	Del_6q27	0.95	1
17q-Amp	Amp_12p13.33	0.95	1
1q-Amp	Del_6q15	0.95	1
Amp_6p23	Del_16q24.3	0.95	1
Amp_19q13.42	Del_4p16.3	0.95	1
ARID1A	Del_4p16.3	0.951	1
CBFB	Del_9p23	0.951	1
CDKN1B	Del_11q25	0.951	1
FOXA1	Del_19p13.3	0.951	1
MAP3K1	Amp_1p22.3	0.951	1
PTPN22	Del_11q25	0.951	1
1q-Amp	Del_5q11.2	0.951	1
5p-Amp	Del_2q37.3	0.951	1
17q-Del	Amp_11q13.3	0.951	1
Amp_17q12	Del_14q24.1	0.951	1
Amp_19q13.42	Del_12q23.1	0.951	1
Amp_19q13.42	Del_12q24.31	0.951	1
CBFB	Del_11q25	0.952	1
CDH1	Del_18q23	0.952	1
GATA3	Del_6p25.3	0.952	1
MLL3	Amp_6p23	0.952	1
CDH1	Del_14q24.1	0.953	1
ERBB2	Amp_8q24.21	0.953	1
MAP3K1	Amp_4q13.3	0.953	1
SPEN	6q-Del	0.953	1
TP53	Amp_17q23.1	0.953	1
16p-Amp	11p-Del	0.953	1
Amp_10p15.1	Del_9p23	0.953	1
CBFB	8p-Del	0.954	1
IRS4	Del_16q24.3	0.954	1
MAP2K4	Del_5q21.3	0.954	1
MLL3	11q-Del	0.954	1
NCOR1	Amp_8p11.23	0.954	1
PTEN	Amp_1q21.3	0.954	1
RUNX1	Amp_10p15.1	0.954	1
16p-Del	Amp_20q13.2	0.954	1
CASZ1	Amp_1q44	0.955	1
CDH1	Amp_19p13.12	0.955	1
CTCF	Amp_8q24.21	0.955	1
PTEN	Amp_17q12	0.955	1
PTEN	Del_17q21.31	0.955	1
1q-Amp	Del_10q23.31	0.955	1
1q-Amp	Del_22q13.32	0.955	1
Amp_1q44	Del_12p13.1	0.955	1
Amp_11p13	Del_2q37.3	0.955	1
KDM6A	Del_16q24.3	0.956	1
MAP3K1	Amp_10q22.3	0.956	1
MAP3K1	Del_11q25	0.956	1
NF1	Del_5q11.2	0.956	1
TBX3	Del_5q11.2	0.956	1
7q-Amp	18p-Del	0.956	1
Amp_1q21.3	Amp_8p11.23	0.956	1
Amp_12p13.33	Del_6q15	0.956	1
AQP12A	Amp_1q21.3	0.957	1
CDH1	17q-Del	0.957	1
CDH1	Del_21q11.2	0.957	1
EYS	16q-Del	0.957	1
RBMX	Amp_11q13.3	0.957	1
RUFY1	Amp_1q21.3	0.957	1
SP3	Amp_1q21.3	0.957	1
16p-Amp	Del_2q37.3	0.957	1
16p-Amp	Del_6q15	0.957	1
Amp_4q13.3	Del_12p13.1	0.957	1
Amp_8p11.21	Del_17q21.31	0.957	1
CASZ1	Amp_8q24.21	0.958	1
SPEN	4p-Del	0.958	1
7q-Amp	4p-Del	0.958	1
16q-Del	Amp_17q23.1	0.958	1
Amp_3q26.32	Del_6q15	0.958	1
ACTL6B	Amp_1q21.3	0.959	1
ARID1A	Del_4q35.1	0.959	1
CDH1	8p-Amp	0.959	1
CDH1	18p-Del	0.959	1
GATA3	Del_4p16.3	0.959	1
MED23	Amp_20q13.2	0.959	1
MUC6	Amp_20q13.2	0.959	1
17q-Amp	Del_14q24.1	0.959	1
MLL3	Amp_8p11.21	0.96	1
MYB	17p-Del	0.96	1
NF1	Amp_17q12	0.96	1
TGS1	17p-Del	0.96	1
1q-Amp	Del_9p21.3	0.96	1
Amp_11q13.3	Del_5q11.2	0.96	1
AQP12A	Amp_1q44	0.961	1
MAP3K1	Del_5q11.2	0.961	1
16p-Amp	6q-Del	0.961	1
8q-Amp	Del_17q21.31	0.961	1
PIK3CA	Del_11q23.3	0.962	1
17p-Del	Amp_12p13.33	0.962	1
6q-Del	Del_12q23.1	0.962	1
Amp_20q13.2	Del_16q24.3	0.962	1
CDKN1B	Del_11q23.3	0.963	1
KRAS	Amp_8q24.21	0.963	1
MLL3	Del_7p22.3	0.963	1
MLL3	Del_7q36.1	0.963	1
PIK3CA	6q-Del	0.963	1
SP3	Amp_8q24.21	0.963	1
SPEN	Del_6q27	0.963	1
7q-Amp	Del_6q27	0.963	1
Amp_6p23	Del_1p22.1	0.963	1
APC	Del_11q23.3	0.964	1
GPRIN2	Del_11q25	0.964	1
MAP2K4	Del_9p21.3	0.964	1
NF1	Del_4q35.1	0.964	1
TBX3	Del_15q13.1	0.964	1
7p-Amp	Del_1p22.1	0.964	1
Amp_10q22.3	Del_6q27	0.964	1
Amp_11p13	Del_16q24.3	0.964	1
Amp_12p13.33	Del_17p12	0.964	1
RUNX1	20q-Amp	0.965	1
RUNX1	Amp_11q14.1	0.965	1
SPEN	Amp_1p22.3	0.965	1
TAF1L	Del_8p23.2	0.965	1
16q-Del	Amp_12q15	0.965	1
APC	22q-Del	0.966	1
MAP2K4	4p-Del	0.966	1
MYH9	22q-Del	0.966	1
PIK3CA	9p-Del	0.966	1
16q-Del	Amp_19q13.42	0.966	1
8p-Del	Amp_1q21.3	0.966	1
Amp_1p22.3	Amp_11q13.3	0.966	1
ARID1A	Del_19p13.3	0.967	1
CDH1	Del_17p12	0.967	1
HRNR	Amp_20q13.2	0.967	1
MAP2K4	Del_10q26.3	0.967	1
MLL3	Del_9q21.11	0.967	1
17q-Amp	Del_2q37.3	0.967	1
GATA3	8p-Amp	0.968	1
KDM6A	TP53	0.968	1
MAP2K4	Del_1p36.13	0.968	1
MAP3K1	Del_7p22.3	0.968	1
PIK3CA	Del_8p23.2	0.968	1
SPEN	Del_6q15	0.968	1
TBX3	Del_13q14.2	0.968	1
7p-Amp	14q-Del	0.968	1
CDH1	Del_12p13.1	0.969	1
FRMPD2	Del_8p23.2	0.969	1
MYB	Del_16q24.3	0.969	1
NCOR1	Amp_8q24.21	0.969	1
NCOR1	Del_22q13.32	0.969	1
RUNX1	Amp_8p11.23	0.969	1
SPEN	Del_4p16.3	0.969	1
SPEN	Del_5q11.2	0.969	1
TBX3	Del_11p15.5	0.969	1
TP53	Del_11q25	0.969	1
16p-Amp	4p-Del	0.969	1
16p-Amp	4q-Del	0.969	1
1q-Amp	6q-Del	0.969	1
1q-Amp	Amp_11p13	0.969	1
16q-Del	Amp_14q21.1	0.969	1
CDH1	7q-Amp	0.97	1
GPS2	1q-Amp	0.97	1
MLL3	Del_6q27	0.97	1
MUC6	Amp_1q44	0.97	1
PIK3CA	Amp_4q13.3	0.97	1
16p-Amp	Del_6q27	0.97	1
MAP2K4	Amp_10p15.1	0.971	1
SPEN	13q-Del	0.971	1
16p-Amp	9p-Del	0.971	1
6q-Del	Amp_13q34	0.971	1
ARID1A	Del_9p23	0.972	1
CBFB	Del_9p21.3	0.972	1
EYS	Del_13q14.2	0.972	1
IRS4	16q-Del	0.972	1
MED23	Amp_8q24.21	0.972	1
NCOR1	8q-Amp	0.972	1
Amp_1p22.3	Amp_17q12	0.972	1
CASZ1	8q-Amp	0.973	1
MLL3	Del_12p13.1	0.973	1
PIK3R1	Amp_8p11.23	0.973	1
Amp_14q21.1	Del_16q24.3	0.973	1
CBFB	Del_8p23.2	0.974	1
CTCF	Amp_20q13.2	0.974	1
FBXW7	Amp_11q13.3	0.974	1
PIK3CA	Del_9p23	0.974	1
TGS1	Del_11q25	0.974	1
1q-Amp	Amp_15q26.3	0.974	1
CTCF	Amp_8p11.21	0.975	1
MYH9	Amp_8p11.21	0.975	1
MYH9	Del_22q13.32	0.975	1
NF1	Amp_8q24.21	0.975	1
SPEN	TP53	0.975	1
SPEN	Del_15q13.1	0.975	1
ZFP36L2	Amp_1q21.3	0.975	1
CDH1	Del_17q21.31	0.976	1
MAP2K4	Del_4p16.3	0.976	1
PIK3R1	Del_13q14.2	0.976	1
TBX3	22q-Del	0.976	1
TBX3	Del_9p23	0.976	1
TP53	17q-Amp	0.976	1
16p-Amp	Del_4q35.1	0.976	1
5p-Amp	6q-Del	0.976	1
EYS	Del_6q15	0.977	1
MYH9	TP53	0.977	1
SF3B1	TP53	0.977	1
ZFP36L2	Amp_1q44	0.977	1
17q-Amp	Del_5q21.3	0.977	1
11q-Del	Amp_3q26.32	0.977	1
18q-Del	Amp_6q21	0.977	1
Amp_1q21.3	Amp_15q26.3	0.977	1
Amp_1q44	Del_2q37.3	0.977	1
Amp_17q12	Del_16q24.3	0.977	1
GATA3	Amp_6p23	0.978	1
GATA3	Amp_12p13.33	0.978	1
MAP2K4	Amp_11q14.1	0.978	1
PIK3CA	Del_1p36.13	0.978	1
SMAD2	Amp_8q24.21	0.978	1
TAF1L	8p-Del	0.978	1
TBL1XR1	Del_8p23.2	0.978	1
TP53	Del_22q13.32	0.978	1
16p-Amp	Del_5q21.3	0.978	1
16q-Del	Amp_13q34	0.978	1
Amp_1q21.3	Del_9p23	0.978	1
GATA3	Amp_6q21	0.979	1
KDM6A	Amp_8p11.23	0.979	1
MAP3K1	Amp_1q44	0.979	1
PIK3CA	Amp_8p11.23	0.979	1
PIK3CA	Amp_17q12	0.979	1
RUNX1	Amp_17q23.1	0.979	1
RUNX1	Del_9p23	0.979	1
5p-Amp	Del_1p36.13	0.979	1
7q-Amp	Del_11p15.5	0.979	1
Amp_1q21.3	Del_17p12	0.979	1
Amp_11q13.3	Del_5q21.3	0.979	1
CASZ1	Del_11q25	0.98	1
CDH1	Del_9q34.2	0.98	1
MAP3K1	Del_11p15.5	0.98	1
PIK3CA	Del_11q25	0.98	1
1p-Del	Amp_19q12	0.98	1
ACTL6B	PIK3CA	0.981	1
CDH1	9q-Del	0.981	1
ERBB2	Amp_17q23.1	0.981	1
RUNX1	Del_18q23	0.981	1
TGS1	Del_11q23.3	0.981	1
1q-Amp	4p-Del	0.981	1
1q-Amp	4q-Del	0.981	1
1q-Amp	Del_2q37.3	0.981	1
20p-Amp	16q-Del	0.981	1
8p-Del	Amp_1p22.3	0.981	1
Amp_10q22.3	Del_11q13.1	0.981	1
CBFB	TP53	0.982	1
CBFB	13q-Del	0.982	1
CDH1	Amp_14q21.1	0.982	1
IRS4	TP53	0.982	1
MLL3	Del_2q37.3	0.982	1
MLL3	Del_22q13.32	0.982	1
NLGN3	TP53	0.982	1
PIK3CA	Amp_20q13.2	0.982	1
17q-Amp	18q-Del	0.982	1
7p-Amp	Del_6q27	0.982	1
18q-Del	Amp_4q13.3	0.982	1
Amp_1q21.3	Del_11p15.5	0.982	1
Amp_17q12	Del_10q23.31	0.982	1
CDH1	Amp_8p11.21	0.983	1
PTEN	Del_5q11.2	0.983	1
SPEN	Del_13q14.2	0.983	1
TP53	Del_11q13.1	0.983	1
16p-Amp	Del_12q23.1	0.983	1
17q-Amp	18p-Del	0.983	1
16q-Del	Amp_10q22.3	0.983	1
Amp_1q21.3	Del_20p13	0.983	1
Amp_13q34	Del_16q24.3	0.983	1
Amp_17q12	Del_6p25.3	0.983	1
MAP3K1	Amp_1q21.3	0.984	1
TAF1L	Amp_11q13.3	0.984	1
TBX3	Amp_20q13.2	0.984	1
16p-Amp	9q-Del	0.984	1
1q-Amp	Amp_8q24.21	0.984	1
Amp_19q13.42	Del_7q36.1	0.984	1
GATA3	Del_5q11.2	0.985	1
MAP3K1	11p-Del	0.985	1
MAP3K1	Amp_13q34	0.985	1
MLL3	22q-Del	0.985	1
NCOR1	22q-Del	0.985	1
NF1	Del_22q13.32	0.985	1
TBX3	Del_22q13.32	0.985	1
16p-Amp	Del_4p16.3	0.985	1
5p-Amp	Del_21q11.2	0.985	1
7q-Amp	Amp_17q23.1	0.985	1
14q-Del	Amp_19q13.42	0.985	1
APC	Del_13q14.2	0.986	1
ARID1A	Del_9p21.3	0.986	1
CDH1	GATA3	0.986	1
PIK3CA	Amp_8p11.21	0.986	1
PIK3CA	Del_21q11.2	0.986	1
RUNX1	8p-Del	0.986	1
FRMPD2	Del_11q23.3	0.987	1
MAP3K1	Amp_6q21	0.987	1
MYB	Del_17p12	0.987	1
PTEN	Amp_8q24.21	0.987	1
RBMX	Del_11q23.3	0.987	1
TGS1	Del_17p12	0.987	1
Amp_6q21	Del_6q15	0.987	1
CDH1	Del_9q21.11	0.988	1
NF1	Amp_1q21.3	0.988	1
PIK3CA	17q-Amp	0.988	1
PIK3CA	Del_6q27	0.988	1
SF3B1	Amp_8q24.21	0.988	1
TBX3	Del_3p21.31	0.988	1
TBX3	Del_9p21.3	0.988	1
5p-Amp	22q-Del	0.988	1
16q-Del	Amp_8q24.21	0.988	1
16q-Del	Amp_12p13.33	0.988	1
CDH1	4q-Del	0.989	1
CDH1	8p-Del	0.989	1
CDH1	Amp_6p23	0.989	1
CDH1	Amp_11p13	0.989	1
MAP3K1	Del_17q21.31	0.989	1
NCOR1	Del_6q27	0.989	1
SF3B1	8q-Amp	0.989	1
16p-Amp	14q-Del	0.989	1
16p-Amp	17q-Del	0.989	1
1q-Amp	Del_8p23.2	0.989	1
1q-Amp	Del_9p23	0.989	1
Amp_1q21.3	Del_8p23.2	0.989	1
Amp_1q21.3	Del_19q13.32	0.989	1
Amp_10p15.1	Del_6q15	0.989	1
Del_5q21.3	Del_16q24.3	0.989	1
CDH1	17q-Amp	0.99	1
CDH1	Amp_4q13.3	0.99	1
CTCF	Del_8p23.2	0.99	1
ERBB2	Amp_11q13.3	0.99	1
GATA3	Amp_8q24.21	0.99	1
MLL3	Del_5q21.3	0.99	1
RB1	Amp_11q13.3	0.99	1
RB1	Del_16q24.3	0.99	1
1q-Amp	Del_5q21.3	0.99	1
22q-Del	Amp_10p15.1	0.99	1
Amp_1q21.3	Del_12p13.1	0.99	1
Amp_3q26.32	Del_11q13.1	0.99	1
Amp_19q13.42	Del_16q24.3	0.99	1
GATA3	Del_10q26.3	0.991	1
PIK3CA	Amp_11p13	0.991	1
TBX3	Del_6q27	0.991	1
1q-Amp	Del_4p16.3	0.991	1
MAP3K1	Del_4q35.1	0.992	1
MAP3K1	Del_5q21.3	0.992	1
MAP3K1	Del_15q13.1	0.992	1
NF1	Amp_8p11.23	0.992	1
1q-Amp	16p-Del	0.992	1
1p-Del	Amp_6p23	0.992	1
MAP3K1	Del_6q27	0.993	1
MLL3	15q-Del	0.993	1
MLL3	Del_11q25	0.993	1
MUC6	Amp_1q21.3	0.993	1
NCOR1	Del_14q24.1	0.993	1
PIK3CA	9q-Del	0.993	1
RB1	Amp_8p11.23	0.993	1
TBL1XR1	Amp_8q24.21	0.993	1
16p-Amp	Del_17q21.31	0.993	1
16q-Del	Del_5q11.2	0.993	1
CDH1	Del_13q14.2	0.994	1
GATA3	8q-Amp	0.994	1
GATA3	Amp_3q26.32	0.994	1
GATA3	Amp_8p11.21	0.994	1
MED23	TP53	0.994	1
MYB	Del_8p23.2	0.994	1
PIK3CA	13q-Del	0.994	1
PIK3CA	Del_6q15	0.994	1
PIK3CA	Del_15q13.1	0.994	1
PIK3CA	Del_19q13.32	0.994	1
RUNX1	Amp_8q24.21	0.994	1
16p-Amp	Del_17p12	0.994	1
1q-Amp	Del_21q11.2	0.994	1
5p-Amp	Del_22q13.32	0.994	1
16q-Del	Amp_19q12	0.994	1
16q-Del	Del_5q21.3	0.994	1
Amp_6q21	Del_22q13.32	0.994	1
ARID1A	TP53	0.995	1
CDH1	7p-Amp	0.995	1
GATA3	Amp_19q12	0.995	1
GATA3	Del_12q24.31	0.995	1
MAP3K1	Del_19p13.3	0.995	1
MLL3	Amp_17q12	0.995	1
NF1	8q-Amp	0.995	1
PIK3CA	Del_9p21.3	0.995	1
PIK3CA	Del_11p15.5	0.995	1
TP53	16p-Amp	0.995	1
TP53	Amp_1q44	0.995	1
1q-Amp	Del_3p21.31	0.995	1
8p-Amp	4q-Del	0.995	1
Amp_1q21.3	Del_3p21.31	0.995	1
Amp_8p11.23	Del_17q21.31	0.995	1
Amp_11q13.3	Amp_13q34	0.995	1
Amp_13q34	Del_6q15	0.995	1
CDH1	13q-Del	0.996	1
CDH1	9p-Del	0.996	1
CDH1	Del_1p36.13	0.996	1
CDH1	Del_4q35.1	0.996	1
CDH1	Del_15q13.1	0.996	1
CDH1	Del_19q13.32	0.996	1
CDKN1B	Amp_8q24.21	0.996	1
GATA3	4q-Del	0.996	1
MAP2K4	TP53	0.996	1
MAP3K1	17q-Del	0.996	1
MAP3K1	Del_10q26.3	0.996	1
PIK3CA	8p-Amp	0.996	1
PIK3CA	Amp_19q13.42	0.996	1
RUNX1	Del_8p23.2	0.996	1
SPEN	Amp_8p11.23	0.996	1
TP53	1p-Del	0.996	1
Amp_1p22.3	Del_9p21.3	0.996	1
Amp_1q44	Del_21q11.2	0.996	1
CTCF	TP53	0.997	1
GATA3	PIK3CA	0.997	1
GATA3	Del_4q35.1	0.997	1
MAP2K4	13q-Del	0.997	1
MAP3K1	Amp_3q26.32	0.997	1
MAP3K1	Amp_17q12	0.997	1
NF1	22q-Del	0.997	1
PIK3CA	4p-Del	0.997	1
PIK3CA	Amp_13q34	0.997	1
1q-Amp	Del_11p15.5	0.997	1
22q-Del	Amp_6q21	0.997	1
FOXA1	TP53	0.998	1
GATA3	5q-Del	0.998	1
GATA3	Amp_10p15.1	0.998	1
MAP3K1	17p-Del	0.998	1
MLL3	Amp_17q23.1	0.998	1
NF1	Amp_8p11.21	0.998	1
PIK3CA	16p-Del	0.998	1
PIK3CA	Amp_1p22.3	0.998	1
PIK3CA	Del_6p25.3	0.998	1
PIK3CA	Del_19p13.3	0.998	1
TP53	6q-Del	0.998	1
16p-Amp	Del_12q24.31	0.998	1
1q-Amp	Amp_8p11.23	0.998	1
1q-Amp	Del_19p13.3	0.998	1
Amp_1p22.3	Del_9p23	0.998	1
Amp_1q44	Amp_8p11.23	0.998	1
Del_5q11.2	Del_16q24.3	0.998	1
CDH1	8q-Amp	0.999	1
CDH1	4p-Del	0.999	1
CDH1	Amp_6q21	0.999	1
CDH1	Amp_10p15.1	0.999	1
CDH1	Amp_19q13.42	0.999	1
CDH1	Del_6p25.3	0.999	1
GATA3	Del_5q21.3	0.999	1
MAP3K1	Del_17p12	0.999	1
PIK3CA	Del_4p16.3	0.999	1
PIK3CA	Del_9q21.11	0.999	1
PIK3CA	Del_9q34.2	0.999	1
PIK3CA	Del_10q26.3	0.999	1
16p-Amp	17p-Del	0.999	1
8q-Amp	4q-Del	0.999	1
16q-Del	Amp_3q26.32	0.999	1
16q-Del	Amp_20q13.2	0.999	1
Amp_1q21.3	Del_21q11.2	0.999	1
ACTL6B	APC	1	1
ACTL6B	AQP12A	1	1
ACTL6B	ARID1A	1	1
ACTL6B	C17orf95	1	1
ACTL6B	CASZ1	1	1
ACTL6B	CBFB	1	1
ACTL6B	CDC42EP1	1	1
ACTL6B	CDKN1B	1	1
ACTL6B	CTCF	1	1
ACTL6B	ERBB2	1	1
ACTL6B	EYS	1	1
ACTL6B	FBXW7	1	1
ACTL6B	FGFR2	1	1
ACTL6B	FOXA1	1	1
ACTL6B	FRMPD2	1	1
ACTL6B	GPRIN2	1	1
ACTL6B	GPS2	1	1
ACTL6B	HRNR	1	1
ACTL6B	ICOSLG	1	1
ACTL6B	IL1RAP	1	1
ACTL6B	KCNN3	1	1
ACTL6B	KDM6A	1	1
ACTL6B	KRAS	1	1
ACTL6B	MAP2K4	1	1
ACTL6B	MED23	1	1
ACTL6B	MYB	1	1
ACTL6B	MYH9	1	1
ACTL6B	NCDN	1	1
ACTL6B	NF1	1	1
ACTL6B	NLGN3	1	1
ACTL6B	PIK3R1	1	1
ACTL6B	PTEN	1	1
ACTL6B	PTPN22	1	1
ACTL6B	RAB42	1	1
ACTL6B	RBMX	1	1
ACTL6B	RUFY1	1	1
ACTL6B	RUNX1	1	1
ACTL6B	SF3B1	1	1
ACTL6B	SMAD2	1	1
ACTL6B	SMAD4	1	1
ACTL6B	SP3	1	1
ACTL6B	SPEN	1	1
ACTL6B	TAF1L	1	1
ACTL6B	TBL1XR1	1	1
ACTL6B	TCP11	1	1
ACTL6B	TFE3	1	1
ACTL6B	TGS1	1	1
ACTL6B	TPP2	1	1
ACTL6B	USP36	1	1
ACTL6B	VCPIP1	1	1
ACTL6B	ZBTB7C	1	1
ACTL6B	ZFP36L1	1	1
ACTL6B	ZFP36L2	1	1
ACTL6B	17q-Amp	1	1
ACTL6B	20q-Amp	1	1
ACTL6B	14q-Del	1	1
ACTL6B	15q-Del	1	1
ACTL6B	16p-Del	1	1
ACTL6B	17q-Del	1	1
ACTL6B	18p-Del	1	1
ACTL6B	18q-Del	1	1
ACTL6B	9q-Del	1	1
ACTL6B	Amp_3p25.1	1	1
ACTL6B	Amp_4q13.3	1	1
ACTL6B	Amp_12p13.33	1	1
ACTL6B	Amp_12q15	1	1
ACTL6B	Amp_14q21.1	1	1
ACTL6B	Del_2q37.3	1	1
ACTL6B	Del_7p22.3	1	1
ACTL6B	Del_9q21.11	1	1
ACTL6B	Del_15q13.1	1	1
ACTL6B	Del_18q23	1	1
APC	AQP12A	1	1
APC	CDC42EP1	1	1
APC	CDKN1B	1	1
APC	CTCF	1	1
APC	KCNN3	1	1
APC	MYB	1	1
APC	NBPF9	1	1
APC	NCDN	1	1
APC	PAX2	1	1
APC	RAB42	1	1
APC	RUNX1	1	1
APC	TBL1XR1	1	1
APC	TCP11	1	1
APC	ZBTB7C	1	1
APC	ZFP36L1	1	1
APC	ZFP36L2	1	1
APC	5p-Amp	1	1
APC	14q-Del	1	1
APC	15q-Del	1	1
APC	18p-Del	1	1
APC	18q-Del	1	1
APC	1q-Del	1	1
APC	4p-Del	1	1
APC	4q-Del	1	1
APC	5q-Del	1	1
APC	9p-Del	1	1
APC	9q-Del	1	1
APC	Amp_3p25.1	1	1
APC	Amp_4q13.3	1	1
APC	Amp_6q21	1	1
APC	Amp_10q22.3	1	1
APC	Amp_12q15	1	1
APC	Amp_13q34	1	1
APC	Amp_14q21.1	1	1
APC	Amp_19p13.12	1	1
APC	Amp_19q12	1	1
APC	Del_4p16.3	1	1
APC	Del_4q35.1	1	1
APC	Del_7p22.3	1	1
APC	Del_9p23	1	1
APC	Del_9q21.11	1	1
APC	Del_9q34.2	1	1
APC	Del_10q23.31	1	1
APC	Del_12q23.1	1	1
APC	Del_12q24.31	1	1
APC	Del_18q23	1	1
APC	Del_19q13.32	1	1
APC	Del_21q11.2	1	1
APC	Del_22q13.32	1	1
AQP12A	ARID1A	1	1
AQP12A	C17orf95	1	1
AQP12A	CBFB	1	1
AQP12A	CDC42EP1	1	1
AQP12A	CDH1	1	1
AQP12A	CDKN1B	1	1
AQP12A	CTCF	1	1
AQP12A	ERBB2	1	1
AQP12A	EYS	1	1
AQP12A	FBXW7	1	1
AQP12A	FGFR2	1	1
AQP12A	FOXA1	1	1
AQP12A	GPS2	1	1
AQP12A	ICOSLG	1	1
AQP12A	IL1RAP	1	1
AQP12A	IRS4	1	1
AQP12A	KCNN3	1	1
AQP12A	KDM6A	1	1
AQP12A	KRAS	1	1
AQP12A	MAP2K4	1	1
AQP12A	MAP3K1	1	1
AQP12A	MED23	1	1
AQP12A	MYB	1	1
AQP12A	MYH9	1	1
AQP12A	NBPF9	1	1
AQP12A	NCDN	1	1
AQP12A	NCOR1	1	1
AQP12A	NF1	1	1
AQP12A	NLGN3	1	1
AQP12A	PAX2	1	1
AQP12A	PTPN22	1	1
AQP12A	RAB42	1	1
AQP12A	RB1	1	1
AQP12A	RBMX	1	1
AQP12A	RUFY1	1	1
AQP12A	RUNX1	1	1
AQP12A	SF3B1	1	1
AQP12A	SMAD2	1	1
AQP12A	SMAD4	1	1
AQP12A	SP3	1	1
AQP12A	TAF1L	1	1
AQP12A	TBL1XR1	1	1
AQP12A	TBX3	1	1
AQP12A	TCP11	1	1
AQP12A	TFE3	1	1
AQP12A	TGS1	1	1
AQP12A	TPP2	1	1
AQP12A	USP36	1	1
AQP12A	VCPIP1	1	1
AQP12A	ZBTB7C	1	1
AQP12A	ZFP36L1	1	1
AQP12A	ZFP36L2	1	1
AQP12A	ZMYM3	1	1
AQP12A	ZNF362	1	1
AQP12A	17q-Amp	1	1
AQP12A	5p-Amp	1	1
AQP12A	8p-Amp	1	1
AQP12A	15q-Del	1	1
AQP12A	16p-Del	1	1
AQP12A	1p-Del	1	1
AQP12A	1q-Del	1	1
AQP12A	5q-Del	1	1
AQP12A	6q-Del	1	1
AQP12A	Amp_1p22.3	1	1
AQP12A	Amp_3p25.1	1	1
AQP12A	Amp_4q13.3	1	1
AQP12A	Amp_6p23	1	1
AQP12A	Amp_6q21	1	1
AQP12A	Amp_8p11.21	1	1
AQP12A	Amp_10q22.3	1	1
AQP12A	Amp_12p13.33	1	1
AQP12A	Amp_12q15	1	1
AQP12A	Amp_13q34	1	1
AQP12A	Amp_19p13.12	1	1
AQP12A	Amp_19q12	1	1
AQP12A	Amp_19q13.42	1	1
AQP12A	Del_2q37.3	1	1
AQP12A	Del_5q11.2	1	1
AQP12A	Del_5q21.3	1	1
AQP12A	Del_6q27	1	1
AQP12A	Del_7p22.3	1	1
AQP12A	Del_10q23.31	1	1
AQP12A	Del_10q26.3	1	1
AQP12A	Del_12p13.1	1	1
AQP12A	Del_12q24.31	1	1
AQP12A	Del_19q13.32	1	1
AQP12A	Del_20p13	1	1
AQP12A	Del_21q11.2	1	1
ARID1A	FGFR2	1	1
ARID1A	GPRIN2	1	1
ARID1A	GPS2	1	1
ARID1A	ICOSLG	1	1
ARID1A	IL1RAP	1	1
ARID1A	KCNN3	1	1
ARID1A	KRAS	1	1
ARID1A	NBPF9	1	1
ARID1A	PIK3R1	1	1
ARID1A	PTEN	1	1
ARID1A	RAB42	1	1
ARID1A	RB1	1	1
ARID1A	TAF1L	1	1
ARID1A	TBL1XR1	1	1
ARID1A	ZBTB7C	1	1
ARID1A	ZFP36L1	1	1
ARID1A	ZNF362	1	1
ARID1A	7p-Amp	1	1
ARID1A	7q-Amp	1	1
ARID1A	1q-Del	1	1
ARID1A	4q-Del	1	1
ARID1A	5q-Del	1	1
ARID1A	Amp_6q21	1	1
ARID1A	Amp_19p13.12	1	1
ARID1A	Del_12q23.1	1	1
ARID1A	Del_20p13	1	1
C17orf95	CBFB	1	1
C17orf95	CDC42EP1	1	1
C17orf95	CDKN1B	1	1
C17orf95	CTCF	1	1
C17orf95	GATA3	1	1
C17orf95	GPRIN2	1	1
C17orf95	ICOSLG	1	1
C17orf95	IRS4	1	1
C17orf95	KCNN3	1	1
C17orf95	MAP2K4	1	1
C17orf95	MED23	1	1
C17orf95	NBPF9	1	1
C17orf95	NCDN	1	1
C17orf95	NLGN3	1	1
C17orf95	PAX2	1	1
C17orf95	RAB42	1	1
C17orf95	RUNX1	1	1
C17orf95	TBL1XR1	1	1
C17orf95	TCP11	1	1
C17orf95	TFE3	1	1
C17orf95	USP36	1	1
C17orf95	VCPIP1	1	1
C17orf95	ZBTB7C	1	1
C17orf95	ZFP36L1	1	1
C17orf95	ZFP36L2	1	1
C17orf95	ZNF362	1	1
C17orf95	16p-Amp	1	1
C17orf95	5p-Amp	1	1
C17orf95	7p-Amp	1	1
C17orf95	7q-Amp	1	1
C17orf95	11p-Del	1	1
C17orf95	11q-Del	1	1
C17orf95	14q-Del	1	1
C17orf95	15q-Del	1	1
C17orf95	17q-Del	1	1
C17orf95	18p-Del	1	1
C17orf95	18q-Del	1	1
C17orf95	1p-Del	1	1
C17orf95	1q-Del	1	1
C17orf95	4p-Del	1	1
C17orf95	4q-Del	1	1
C17orf95	5q-Del	1	1
C17orf95	6q-Del	1	1
C17orf95	Amp_1p22.3	1	1
C17orf95	Amp_1q21.3	1	1
C17orf95	Amp_3p25.1	1	1
C17orf95	Amp_4q13.3	1	1
C17orf95	Amp_6q21	1	1
C17orf95	Amp_8p11.23	1	1
C17orf95	Amp_8p11.21	1	1
C17orf95	Amp_10p15.1	1	1
C17orf95	Amp_10q22.3	1	1
C17orf95	Amp_11p13	1	1
C17orf95	Amp_11q14.1	1	1
C17orf95	Amp_12p13.33	1	1
C17orf95	Amp_13q34	1	1
C17orf95	Amp_14q21.1	1	1
C17orf95	Amp_19q12	1	1
C17orf95	Amp_19q13.42	1	1
C17orf95	Del_1p36.13	1	1
C17orf95	Del_1p22.1	1	1
C17orf95	Del_4p16.3	1	1
C17orf95	Del_5q11.2	1	1
C17orf95	Del_6q15	1	1
C17orf95	Del_6q27	1	1
C17orf95	Del_7p22.3	1	1
C17orf95	Del_7q36.1	1	1
C17orf95	Del_10q23.31	1	1
C17orf95	Del_11p15.5	1	1
C17orf95	Del_11q13.1	1	1
C17orf95	Del_12q23.1	1	1
C17orf95	Del_12q24.31	1	1
C17orf95	Del_19p13.3	1	1
C17orf95	Del_19q13.32	1	1
C17orf95	Del_20p13	1	1
C17orf95	Del_21q11.2	1	1
CASZ1	CDC42EP1	1	1
CASZ1	CDKN1B	1	1
CASZ1	CTCF	1	1
CASZ1	GATA3	1	1
CASZ1	ICOSLG	1	1
CASZ1	IRS4	1	1
CASZ1	KCNN3	1	1
CASZ1	MAP2K4	1	1
CASZ1	MED23	1	1
CASZ1	MYB	1	1
CASZ1	NBPF9	1	1
CASZ1	NCDN	1	1
CASZ1	NLGN3	1	1
CASZ1	PAX2	1	1
CASZ1	RAB42	1	1
CASZ1	TBL1XR1	1	1
CASZ1	TCP11	1	1
CASZ1	TFE3	1	1
CASZ1	USP36	1	1
CASZ1	ZBTB7C	1	1
CASZ1	ZFP36L1	1	1
CASZ1	ZFP36L2	1	1
CASZ1	ZNF362	1	1
CASZ1	7p-Amp	1	1
CASZ1	7q-Amp	1	1
CASZ1	11q-Del	1	1
CASZ1	13q-Del	1	1
CASZ1	15q-Del	1	1
CASZ1	17q-Del	1	1
CASZ1	18p-Del	1	1
CASZ1	18q-Del	1	1
CASZ1	1p-Del	1	1
CASZ1	1q-Del	1	1
CASZ1	4p-Del	1	1
CASZ1	4q-Del	1	1
CASZ1	5q-Del	1	1
CASZ1	6q-Del	1	1
CASZ1	Amp_1p22.3	1	1
CASZ1	Amp_3p25.1	1	1
CASZ1	Amp_4q13.3	1	1
CASZ1	Amp_6p23	1	1
CASZ1	Amp_6q21	1	1
CASZ1	Amp_8p11.21	1	1
CASZ1	Amp_10q22.3	1	1
CASZ1	Amp_11p13	1	1
CASZ1	Amp_14q21.1	1	1
CASZ1	Amp_19p13.12	1	1
CASZ1	Amp_19q13.42	1	1
CASZ1	Del_4p16.3	1	1
CASZ1	Del_4q35.1	1	1
CASZ1	Del_5q21.3	1	1
CASZ1	Del_6p25.3	1	1
CASZ1	Del_6q15	1	1
CASZ1	Del_6q27	1	1
CASZ1	Del_7p22.3	1	1
CASZ1	Del_7q36.1	1	1
CASZ1	Del_11q23.3	1	1
CASZ1	Del_13q14.2	1	1
CASZ1	Del_15q13.1	1	1
CASZ1	Del_18q23	1	1
CASZ1	Del_19q13.32	1	1
CASZ1	Del_20p13	1	1
CBFB	CTCF	1	1
CBFB	EYS	1	1
CBFB	FBXW7	1	1
CBFB	FGFR2	1	1
CBFB	FRMPD2	1	1
CBFB	GPRIN2	1	1
CBFB	ICOSLG	1	1
CBFB	IL1RAP	1	1
CBFB	IRS4	1	1
CBFB	KCNN3	1	1
CBFB	KDM6A	1	1
CBFB	KRAS	1	1
CBFB	MAP2K4	1	1
CBFB	MAP3K1	1	1
CBFB	MED23	1	1
CBFB	MYB	1	1
CBFB	NF1	1	1
CBFB	NLGN3	1	1
CBFB	PAX2	1	1
CBFB	PIK3R1	1	1
CBFB	PTEN	1	1
CBFB	PTPN22	1	1
CBFB	RAB42	1	1
CBFB	RUFY1	1	1
CBFB	SF3B1	1	1
CBFB	SMAD2	1	1
CBFB	SP3	1	1
CBFB	TCP11	1	1
CBFB	USP36	1	1
CBFB	VCPIP1	1	1
CBFB	ZBTB7C	1	1
CBFB	ZFP36L1	1	1
CBFB	ZFP36L2	1	1
CBFB	ZMYM3	1	1
CBFB	ZNF362	1	1
CBFB	5p-Amp	1	1
CBFB	7p-Amp	1	1
CBFB	7q-Amp	1	1
CBFB	11p-Del	1	1
CBFB	14q-Del	1	1
CBFB	17q-Del	1	1
CBFB	18p-Del	1	1
CBFB	1q-Del	1	1
CBFB	4p-Del	1	1
CBFB	4q-Del	1	1
CBFB	5q-Del	1	1
CBFB	9q-Del	1	1
CBFB	Amp_3p25.1	1	1
CBFB	Amp_3q26.32	1	1
CBFB	Amp_6p23	1	1
CBFB	Amp_6q21	1	1
CBFB	Amp_10q22.3	1	1
CBFB	Amp_11p13	1	1
CBFB	Amp_12p13.33	1	1
CBFB	Amp_13q34	1	1
CBFB	Amp_15q26.3	1	1
CBFB	Amp_19p13.12	1	1
CBFB	Amp_19q12	1	1
CBFB	Amp_19q13.42	1	1
CBFB	Del_2q37.3	1	1
CBFB	Del_3p21.31	1	1
CBFB	Del_4p16.3	1	1
CBFB	Del_5q21.3	1	1
CBFB	Del_7p22.3	1	1
CBFB	Del_9q21.11	1	1
CBFB	Del_9q34.2	1	1
CBFB	Del_10q23.31	1	1
CBFB	Del_10q26.3	1	1
CBFB	Del_11p15.5	1	1
CBFB	Del_12q24.31	1	1
CBFB	Del_14q24.1	1	1
CBFB	Del_17q21.31	1	1
CBFB	Del_18q23	1	1
CBFB	Del_19q13.32	1	1
CDC42EP1	CDKN1B	1	1
CDC42EP1	CTCF	1	1
CDC42EP1	FBXW7	1	1
CDC42EP1	FGFR2	1	1
CDC42EP1	FOXA1	1	1
CDC42EP1	FRMPD2	1	1
CDC42EP1	GATA3	1	1
CDC42EP1	GPRIN2	1	1
CDC42EP1	GPS2	1	1
CDC42EP1	ICOSLG	1	1
CDC42EP1	IL1RAP	1	1
CDC42EP1	IRS4	1	1
CDC42EP1	KCNN3	1	1
CDC42EP1	KDM6A	1	1
CDC42EP1	KRAS	1	1
CDC42EP1	MAP2K4	1	1
CDC42EP1	MAP3K1	1	1
CDC42EP1	MED23	1	1
CDC42EP1	MUC6	1	1
CDC42EP1	MYB	1	1
CDC42EP1	MYH9	1	1
CDC42EP1	NBPF9	1	1
CDC42EP1	NCDN	1	1
CDC42EP1	NF1	1	1
CDC42EP1	NLGN3	1	1
CDC42EP1	PAX2	1	1
CDC42EP1	PIK3R1	1	1
CDC42EP1	PTEN	1	1
CDC42EP1	PTPN22	1	1
CDC42EP1	RAB42	1	1
CDC42EP1	RBMX	1	1
CDC42EP1	RUFY1	1	1
CDC42EP1	SF3B1	1	1
CDC42EP1	SMAD2	1	1
CDC42EP1	SMAD4	1	1
CDC42EP1	TBL1XR1	1	1
CDC42EP1	TCP11	1	1
CDC42EP1	TPP2	1	1
CDC42EP1	VCPIP1	1	1
CDC42EP1	ZBTB7C	1	1
CDC42EP1	ZFP36L1	1	1
CDC42EP1	ZFP36L2	1	1
CDC42EP1	ZMYM3	1	1
CDC42EP1	ZNF362	1	1
CDC42EP1	17q-Amp	1	1
CDC42EP1	20p-Amp	1	1
CDC42EP1	20q-Amp	1	1
CDC42EP1	5p-Amp	1	1
CDC42EP1	7p-Amp	1	1
CDC42EP1	7q-Amp	1	1
CDC42EP1	8p-Amp	1	1
CDC42EP1	11p-Del	1	1
CDC42EP1	11q-Del	1	1
CDC42EP1	14q-Del	1	1
CDC42EP1	16p-Del	1	1
CDC42EP1	18p-Del	1	1
CDC42EP1	18q-Del	1	1
CDC42EP1	1p-Del	1	1
CDC42EP1	1q-Del	1	1
CDC42EP1	4p-Del	1	1
CDC42EP1	4q-Del	1	1
CDC42EP1	5q-Del	1	1
CDC42EP1	8p-Del	1	1
CDC42EP1	9p-Del	1	1
CDC42EP1	9q-Del	1	1
CDC42EP1	Amp_1p22.3	1	1
CDC42EP1	Amp_3p25.1	1	1
CDC42EP1	Amp_6q21	1	1
CDC42EP1	Amp_10q22.3	1	1
CDC42EP1	Amp_12p13.33	1	1
CDC42EP1	Amp_17q12	1	1
CDC42EP1	Amp_17q23.1	1	1
CDC42EP1	Amp_19p13.12	1	1
CDC42EP1	Del_1p22.1	1	1
CDC42EP1	Del_2q37.3	1	1
CDC42EP1	Del_3p21.31	1	1
CDC42EP1	Del_4p16.3	1	1
CDC42EP1	Del_5q11.2	1	1
CDC42EP1	Del_5q21.3	1	1
CDC42EP1	Del_6p25.3	1	1
CDC42EP1	Del_7p22.3	1	1
CDC42EP1	Del_7q36.1	1	1
CDC42EP1	Del_9p23	1	1
CDC42EP1	Del_9p21.3	1	1
CDC42EP1	Del_9q34.2	1	1
CDC42EP1	Del_10q23.31	1	1
CDC42EP1	Del_10q26.3	1	1
CDC42EP1	Del_11p15.5	1	1
CDC42EP1	Del_11q13.1	1	1
CDC42EP1	Del_11q23.3	1	1
CDC42EP1	Del_11q25	1	1
CDC42EP1	Del_12p13.1	1	1
CDC42EP1	Del_12q23.1	1	1
CDC42EP1	Del_12q24.31	1	1
CDC42EP1	Del_14q24.1	1	1
CDC42EP1	Del_19p13.3	1	1
CDC42EP1	Del_19q13.32	1	1
CDC42EP1	Del_20p13	1	1
CDH1	CTCF	1	1
CDH1	KCNN3	1	1
CDH1	MUC6	1	1
CDH1	NBPF9	1	1
CDH1	NCDN	1	1
CDH1	NLGN3	1	1
CDH1	PAX2	1	1
CDH1	PTPN22	1	1
CDH1	RAB42	1	1
CDH1	RUFY1	1	1
CDH1	TP53	1	1
CDH1	USP36	1	1
CDH1	ZFP36L2	1	1
CDH1	ZNF362	1	1
CDH1	20p-Amp	1	1
CDH1	20q-Amp	1	1
CDH1	1q-Del	1	1
CDH1	5q-Del	1	1
CDH1	Amp_3p25.1	1	1
CDH1	Amp_3q26.32	1	1
CDH1	Amp_8q24.21	1	1
CDH1	Amp_12p13.33	1	1
CDH1	Amp_13q34	1	1
CDH1	Amp_15q26.3	1	1
CDH1	Amp_17q12	1	1
CDH1	Amp_17q23.1	1	1
CDH1	Amp_19q12	1	1
CDH1	Amp_20q13.2	1	1
CDH1	Del_2q37.3	1	1
CDH1	Del_3p21.31	1	1
CDH1	Del_4p16.3	1	1
CDH1	Del_5q11.2	1	1
CDH1	Del_5q21.3	1	1
CDH1	Del_8p23.2	1	1
CDH1	Del_9p23	1	1
CDH1	Del_9p21.3	1	1
CDH1	Del_10q26.3	1	1
CDH1	Del_11p15.5	1	1
CDH1	Del_19p13.3	1	1
CDH1	Del_20p13	1	1
CDKN1B	ERBB2	1	1
CDKN1B	FBXW7	1	1
CDKN1B	FOXA1	1	1
CDKN1B	GPRIN2	1	1
CDKN1B	GPS2	1	1
CDKN1B	HRNR	1	1
CDKN1B	ICOSLG	1	1
CDKN1B	IL1RAP	1	1
CDKN1B	KCNN3	1	1
CDKN1B	KRAS	1	1
CDKN1B	MAP3K1	1	1
CDKN1B	MED23	1	1
CDKN1B	MUC6	1	1
CDKN1B	MYB	1	1
CDKN1B	MYH9	1	1
CDKN1B	NBPF9	1	1
CDKN1B	NCDN	1	1
CDKN1B	NF1	1	1
CDKN1B	PAX2	1	1
CDKN1B	PIK3R1	1	1
CDKN1B	RAB42	1	1
CDKN1B	RB1	1	1
CDKN1B	SF3B1	1	1
CDKN1B	SMAD2	1	1
CDKN1B	SP3	1	1
CDKN1B	TAF1L	1	1
CDKN1B	TFE3	1	1
CDKN1B	TPP2	1	1
CDKN1B	USP36	1	1
CDKN1B	ZBTB7C	1	1
CDKN1B	ZFP36L1	1	1
CDKN1B	ZFP36L2	1	1
CDKN1B	ZMYM3	1	1
CDKN1B	ZNF362	1	1
CDKN1B	16p-Amp	1	1
CDKN1B	5p-Amp	1	1
CDKN1B	7p-Amp	1	1
CDKN1B	7q-Amp	1	1
CDKN1B	11p-Del	1	1
CDKN1B	11q-Del	1	1
CDKN1B	14q-Del	1	1
CDKN1B	15q-Del	1	1
CDKN1B	16p-Del	1	1
CDKN1B	1p-Del	1	1
CDKN1B	1q-Del	1	1
CDKN1B	5q-Del	1	1
CDKN1B	9p-Del	1	1
CDKN1B	9q-Del	1	1
CDKN1B	Amp_3p25.1	1	1
CDKN1B	Amp_3q26.32	1	1
CDKN1B	Amp_6p23	1	1
CDKN1B	Amp_6q21	1	1
CDKN1B	Amp_8p11.23	1	1
CDKN1B	Amp_10q22.3	1	1
CDKN1B	Amp_11p13	1	1
CDKN1B	Amp_11q14.1	1	1
CDKN1B	Amp_12p13.33	1	1
CDKN1B	Amp_12q15	1	1
CDKN1B	Amp_13q34	1	1
CDKN1B	Amp_14q21.1	1	1
CDKN1B	Amp_15q26.3	1	1
CDKN1B	Amp_19p13.12	1	1
CDKN1B	Amp_19q13.42	1	1
CDKN1B	Del_2q37.3	1	1
CDKN1B	Del_5q11.2	1	1
CDKN1B	Del_5q21.3	1	1
CDKN1B	Del_6p25.3	1	1
CDKN1B	Del_7p22.3	1	1
CDKN1B	Del_7q36.1	1	1
CDKN1B	Del_9p23	1	1
CDKN1B	Del_9p21.3	1	1
CDKN1B	Del_9q21.11	1	1
CDKN1B	Del_9q34.2	1	1
CDKN1B	Del_10q26.3	1	1
CDKN1B	Del_11q13.1	1	1
CDKN1B	Del_12p13.1	1	1
CDKN1B	Del_12q23.1	1	1
CDKN1B	Del_14q24.1	1	1
CDKN1B	Del_15q13.1	1	1
CDKN1B	Del_17q21.31	1	1
CDKN1B	Del_19q13.32	1	1
CDKN1B	Del_20p13	1	1
CDKN1B	Del_21q11.2	1	1
CTCF	ERBB2	1	1
CTCF	FBXW7	1	1
CTCF	FGFR2	1	1
CTCF	FOXA1	1	1
CTCF	FRMPD2	1	1
CTCF	GATA3	1	1
CTCF	GPRIN2	1	1
CTCF	GPS2	1	1
CTCF	HRNR	1	1
CTCF	ICOSLG	1	1
CTCF	IL1RAP	1	1
CTCF	IRS4	1	1
CTCF	KCNN3	1	1
CTCF	KDM6A	1	1
CTCF	KRAS	1	1
CTCF	MAP2K4	1	1
CTCF	MED23	1	1
CTCF	MLL3	1	1
CTCF	MUC6	1	1
CTCF	MYB	1	1
CTCF	MYH9	1	1
CTCF	NBPF9	1	1
CTCF	NCDN	1	1
CTCF	NCOR1	1	1
CTCF	NLGN3	1	1
CTCF	PAX2	1	1
CTCF	PIK3R1	1	1
CTCF	PTEN	1	1
CTCF	RAB42	1	1
CTCF	RB1	1	1
CTCF	RBMX	1	1
CTCF	RUFY1	1	1
CTCF	SF3B1	1	1
CTCF	SMAD2	1	1
CTCF	SMAD4	1	1
CTCF	SP3	1	1
CTCF	TAF1L	1	1
CTCF	TBL1XR1	1	1
CTCF	TCP11	1	1
CTCF	TFE3	1	1
CTCF	TGS1	1	1
CTCF	USP36	1	1
CTCF	VCPIP1	1	1
CTCF	ZBTB7C	1	1
CTCF	ZFP36L1	1	1
CTCF	ZFP36L2	1	1
CTCF	ZMYM3	1	1
CTCF	ZNF362	1	1
CTCF	17q-Amp	1	1
CTCF	20p-Amp	1	1
CTCF	20q-Amp	1	1
CTCF	7p-Amp	1	1
CTCF	7q-Amp	1	1
CTCF	14q-Del	1	1
CTCF	15q-Del	1	1
CTCF	17q-Del	1	1
CTCF	9p-Del	1	1
CTCF	9q-Del	1	1
CTCF	Amp_1p22.3	1	1
CTCF	Amp_3p25.1	1	1
CTCF	Amp_3q26.32	1	1
CTCF	Amp_4q13.3	1	1
CTCF	Amp_6q21	1	1
CTCF	Amp_11p13	1	1
CTCF	Amp_12p13.33	1	1
CTCF	Amp_12q15	1	1
CTCF	Amp_13q34	1	1
CTCF	Amp_14q21.1	1	1
CTCF	Amp_19p13.12	1	1
CTCF	Amp_19q12	1	1
CTCF	Del_7p22.3	1	1
CTCF	Del_9p23	1	1
CTCF	Del_9q21.11	1	1
CTCF	Del_11p15.5	1	1
CTCF	Del_12q23.1	1	1
CTCF	Del_14q24.1	1	1
CTCF	Del_19p13.3	1	1
CTCF	Del_21q11.2	1	1
ERBB2	GATA3	1	1
ERBB2	GPRIN2	1	1
ERBB2	GPS2	1	1
ERBB2	ICOSLG	1	1
ERBB2	KCNN3	1	1
ERBB2	MAP2K4	1	1
ERBB2	MUC6	1	1
ERBB2	MYB	1	1
ERBB2	MYH9	1	1
ERBB2	NBPF9	1	1
ERBB2	NCDN	1	1
ERBB2	NLGN3	1	1
ERBB2	PAX2	1	1
ERBB2	PTPN22	1	1
ERBB2	RAB42	1	1
ERBB2	SF3B1	1	1
ERBB2	SMAD4	1	1
ERBB2	SP3	1	1
ERBB2	TCP11	1	1
ERBB2	USP36	1	1
ERBB2	VCPIP1	1	1
ERBB2	ZBTB7C	1	1
ERBB2	ZFP36L1	1	1
ERBB2	ZFP36L2	1	1
ERBB2	ZNF362	1	1
ERBB2	16p-Amp	1	1
ERBB2	17q-Amp	1	1
ERBB2	20p-Amp	1	1
ERBB2	20q-Amp	1	1
ERBB2	5p-Amp	1	1
ERBB2	7p-Amp	1	1
ERBB2	7q-Amp	1	1
ERBB2	8p-Amp	1	1
ERBB2	17q-Del	1	1
ERBB2	1q-Del	1	1
ERBB2	5q-Del	1	1
ERBB2	Amp_3p25.1	1	1
ERBB2	Amp_3q26.32	1	1
ERBB2	Amp_10p15.1	1	1
ERBB2	Amp_10q22.3	1	1
ERBB2	Amp_12p13.33	1	1
ERBB2	Amp_13q34	1	1
ERBB2	Amp_14q21.1	1	1
ERBB2	Amp_15q26.3	1	1
ERBB2	Amp_19p13.12	1	1
ERBB2	Amp_19q12	1	1
ERBB2	Amp_19q13.42	1	1
ERBB2	Del_4p16.3	1	1
ERBB2	Del_5q11.2	1	1
ERBB2	Del_5q21.3	1	1
ERBB2	Del_10q23.31	1	1
ERBB2	Del_10q26.3	1	1
ERBB2	Del_19q13.32	1	1
ERBB2	Del_20p13	1	1
ERBB2	Del_21q11.2	1	1
EYS	GPRIN2	1	1
EYS	ICOSLG	1	1
EYS	KCNN3	1	1
EYS	MED23	1	1
EYS	NBPF9	1	1
EYS	NCDN	1	1
EYS	PAX2	1	1
EYS	RAB42	1	1
EYS	RUNX1	1	1
EYS	TBL1XR1	1	1
EYS	TCP11	1	1
EYS	TFE3	1	1
EYS	ZFP36L1	1	1
EYS	ZFP36L2	1	1
EYS	ZNF362	1	1
EYS	1q-Del	1	1
EYS	22q-Del	1	1
EYS	4q-Del	1	1
EYS	6q-Del	1	1
EYS	Del_7p22.3	1	1
EYS	Del_19q13.32	1	1
FBXW7	GPS2	1	1
FBXW7	ICOSLG	1	1
FBXW7	MED23	1	1
FBXW7	MUC6	1	1
FBXW7	MYB	1	1
FBXW7	NBPF9	1	1
FBXW7	NLGN3	1	1
FBXW7	PAX2	1	1
FBXW7	PTPN22	1	1
FBXW7	RAB42	1	1
FBXW7	RUNX1	1	1
FBXW7	SF3B1	1	1
FBXW7	SMAD4	1	1
FBXW7	SP3	1	1
FBXW7	TBL1XR1	1	1
FBXW7	TCP11	1	1
FBXW7	TGS1	1	1
FBXW7	USP36	1	1
FBXW7	VCPIP1	1	1
FBXW7	ZBTB7C	1	1
FBXW7	ZFP36L1	1	1
FBXW7	ZFP36L2	1	1
FBXW7	ZNF362	1	1
FBXW7	16p-Amp	1	1
FBXW7	17q-Amp	1	1
FBXW7	7p-Amp	1	1
FBXW7	7q-Amp	1	1
FBXW7	11p-Del	1	1
FBXW7	15q-Del	1	1
FBXW7	17q-Del	1	1
FBXW7	1p-Del	1	1
FBXW7	1q-Del	1	1
FBXW7	22q-Del	1	1
FBXW7	5q-Del	1	1
FBXW7	6q-Del	1	1
FBXW7	9p-Del	1	1
FBXW7	9q-Del	1	1
FBXW7	Amp_4q13.3	1	1
FBXW7	Amp_10q22.3	1	1
FBXW7	Amp_14q21.1	1	1
FBXW7	Amp_17q12	1	1
FBXW7	Amp_19q13.42	1	1
FBXW7	Del_1p22.1	1	1
FBXW7	Del_9p23	1	1
FBXW7	Del_9p21.3	1	1
FBXW7	Del_9q21.11	1	1
FBXW7	Del_9q34.2	1	1
FBXW7	Del_11p15.5	1	1
FBXW7	Del_11q13.1	1	1
FBXW7	Del_17q21.31	1	1
FBXW7	Del_19p13.3	1	1
FBXW7	Del_19q13.32	1	1
FBXW7	Del_21q11.2	1	1
FGFR2	FOXA1	1	1
FGFR2	GPRIN2	1	1
FGFR2	GPS2	1	1
FGFR2	ICOSLG	1	1
FGFR2	IRS4	1	1
FGFR2	KDM6A	1	1
FGFR2	MAP2K4	1	1
FGFR2	MAP3K1	1	1
FGFR2	MED23	1	1
FGFR2	MUC6	1	1
FGFR2	MYB	1	1
FGFR2	MYH9	1	1
FGFR2	NBPF9	1	1
FGFR2	NCDN	1	1
FGFR2	NLGN3	1	1
FGFR2	PAX2	1	1
FGFR2	PTPN22	1	1
FGFR2	RAB42	1	1
FGFR2	RUNX1	1	1
FGFR2	SF3B1	1	1
FGFR2	SP3	1	1
FGFR2	TBL1XR1	1	1
FGFR2	TCP11	1	1
FGFR2	TFE3	1	1
FGFR2	TGS1	1	1
FGFR2	USP36	1	1
FGFR2	VCPIP1	1	1
FGFR2	ZBTB7C	1	1
FGFR2	ZFP36L2	1	1
FGFR2	ZNF362	1	1
FGFR2	16p-Amp	1	1
FGFR2	20p-Amp	1	1
FGFR2	20q-Amp	1	1
FGFR2	5p-Amp	1	1
FGFR2	7p-Amp	1	1
FGFR2	8p-Amp	1	1
FGFR2	14q-Del	1	1
FGFR2	1p-Del	1	1
FGFR2	1q-Del	1	1
FGFR2	Amp_8p11.23	1	1
FGFR2	Amp_8p11.21	1	1
FGFR2	Amp_12p13.33	1	1
FGFR2	Amp_13q34	1	1
FGFR2	Amp_19q13.42	1	1
FGFR2	Amp_20q13.2	1	1
FGFR2	Del_1p22.1	1	1
FGFR2	Del_7p22.3	1	1
FGFR2	Del_10q23.31	1	1
FGFR2	Del_11p15.5	1	1
FGFR2	Del_11q13.1	1	1
FGFR2	Del_19q13.32	1	1
FGFR2	Del_20p13	1	1
FGFR2	Del_21q11.2	1	1
FOXA1	FRMPD2	1	1
FOXA1	GPRIN2	1	1
FOXA1	HRNR	1	1
FOXA1	KCNN3	1	1
FOXA1	KRAS	1	1
FOXA1	MAP2K4	1	1
FOXA1	MED23	1	1
FOXA1	NBPF9	1	1
FOXA1	NCOR1	1	1
FOXA1	NLGN3	1	1
FOXA1	PAX2	1	1
FOXA1	RAB42	1	1
FOXA1	RB1	1	1
FOXA1	RUFY1	1	1
FOXA1	RUNX1	1	1
FOXA1	SMAD2	1	1
FOXA1	TCP11	1	1
FOXA1	TFE3	1	1
FOXA1	TPP2	1	1
FOXA1	VCPIP1	1	1
FOXA1	ZBTB7C	1	1
FOXA1	ZFP36L1	1	1
FOXA1	ZFP36L2	1	1
FOXA1	ZNF362	1	1
FOXA1	7p-Amp	1	1
FOXA1	7q-Amp	1	1
FOXA1	15q-Del	1	1
FOXA1	1p-Del	1	1
FOXA1	1q-Del	1	1
FOXA1	4q-Del	1	1
FOXA1	9p-Del	1	1
FOXA1	9q-Del	1	1
FOXA1	Amp_4q13.3	1	1
FOXA1	Amp_6p23	1	1
FOXA1	Amp_6q21	1	1
FOXA1	Amp_13q34	1	1
FOXA1	Amp_15q26.3	1	1
FOXA1	Del_7p22.3	1	1
FOXA1	Del_9p23	1	1
FOXA1	Del_9p21.3	1	1
FOXA1	Del_9q21.11	1	1
FOXA1	Del_9q34.2	1	1
FOXA1	Del_21q11.2	1	1
FRMPD2	GPS2	1	1
FRMPD2	ICOSLG	1	1
FRMPD2	KCNN3	1	1
FRMPD2	MAP2K4	1	1
FRMPD2	MAP3K1	1	1
FRMPD2	MED23	1	1
FRMPD2	MYB	1	1
FRMPD2	MYH9	1	1
FRMPD2	NBPF9	1	1
FRMPD2	NCDN	1	1
FRMPD2	PAX2	1	1
FRMPD2	PTPN22	1	1
FRMPD2	RAB42	1	1
FRMPD2	RUNX1	1	1
FRMPD2	SF3B1	1	1
FRMPD2	SMAD4	1	1
FRMPD2	SP3	1	1
FRMPD2	TBL1XR1	1	1
FRMPD2	TCP11	1	1
FRMPD2	TGS1	1	1
FRMPD2	USP36	1	1
FRMPD2	VCPIP1	1	1
FRMPD2	ZBTB7C	1	1
FRMPD2	ZFP36L1	1	1
FRMPD2	ZNF362	1	1
FRMPD2	5p-Amp	1	1
FRMPD2	7p-Amp	1	1
FRMPD2	7q-Amp	1	1
FRMPD2	11p-Del	1	1
FRMPD2	11q-Del	1	1
FRMPD2	13q-Del	1	1
FRMPD2	14q-Del	1	1
FRMPD2	15q-Del	1	1
FRMPD2	17q-Del	1	1
FRMPD2	18p-Del	1	1
FRMPD2	18q-Del	1	1
FRMPD2	1p-Del	1	1
FRMPD2	1q-Del	1	1
FRMPD2	4p-Del	1	1
FRMPD2	4q-Del	1	1
FRMPD2	6q-Del	1	1
FRMPD2	Amp_3p25.1	1	1
FRMPD2	Amp_4q13.3	1	1
FRMPD2	Amp_6q21	1	1
FRMPD2	Amp_13q34	1	1
FRMPD2	Amp_14q21.1	1	1
FRMPD2	Amp_15q26.3	1	1
FRMPD2	Amp_19p13.12	1	1
FRMPD2	Amp_19q13.42	1	1
FRMPD2	Del_1p22.1	1	1
FRMPD2	Del_2q37.3	1	1
FRMPD2	Del_4p16.3	1	1
FRMPD2	Del_6p25.3	1	1
FRMPD2	Del_6q15	1	1
FRMPD2	Del_9q21.11	1	1
FRMPD2	Del_9q34.2	1	1
FRMPD2	Del_11p15.5	1	1
FRMPD2	Del_11q13.1	1	1
FRMPD2	Del_12p13.1	1	1
FRMPD2	Del_12q24.31	1	1
FRMPD2	Del_13q14.2	1	1
FRMPD2	Del_14q24.1	1	1
FRMPD2	Del_17q21.31	1	1
FRMPD2	Del_18q23	1	1
FRMPD2	Del_19q13.32	1	1
FRMPD2	Del_20p13	1	1
GATA3	ICOSLG	1	1
GATA3	IL1RAP	1	1
GATA3	KRAS	1	1
GATA3	MED23	1	1
GATA3	MYB	1	1
GATA3	NBPF9	1	1
GATA3	PIK3R1	1	1
GATA3	RAB42	1	1
GATA3	SMAD2	1	1
GATA3	TBL1XR1	1	1
GATA3	TP53	1	1
GATA3	ZNF362	1	1
GPRIN2	ICOSLG	1	1
GPRIN2	IRS4	1	1
GPRIN2	KCNN3	1	1
GPRIN2	KDM6A	1	1
GPRIN2	MAP3K1	1	1
GPRIN2	MED23	1	1
GPRIN2	MYB	1	1
GPRIN2	MYH9	1	1
GPRIN2	NBPF9	1	1
GPRIN2	NCDN	1	1
GPRIN2	NF1	1	1
GPRIN2	NLGN3	1	1
GPRIN2	PAX2	1	1
GPRIN2	PIK3R1	1	1
GPRIN2	PTPN22	1	1
GPRIN2	RAB42	1	1
GPRIN2	RB1	1	1
GPRIN2	RBMX	1	1
GPRIN2	RUFY1	1	1
GPRIN2	RUNX1	1	1
GPRIN2	SF3B1	1	1
GPRIN2	SMAD4	1	1
GPRIN2	SP3	1	1
GPRIN2	SPEN	1	1
GPRIN2	TAF1L	1	1
GPRIN2	TBL1XR1	1	1
GPRIN2	TCP11	1	1
GPRIN2	TFE3	1	1
GPRIN2	TGS1	1	1
GPRIN2	USP36	1	1
GPRIN2	ZBTB7C	1	1
GPRIN2	ZFP36L1	1	1
GPRIN2	ZFP36L2	1	1
GPRIN2	ZMYM3	1	1
GPRIN2	ZNF362	1	1
GPRIN2	17q-Amp	1	1
GPRIN2	20p-Amp	1	1
GPRIN2	20q-Amp	1	1
GPRIN2	7p-Amp	1	1
GPRIN2	7q-Amp	1	1
GPRIN2	11p-Del	1	1
GPRIN2	11q-Del	1	1
GPRIN2	14q-Del	1	1
GPRIN2	15q-Del	1	1
GPRIN2	16p-Del	1	1
GPRIN2	18p-Del	1	1
GPRIN2	18q-Del	1	1
GPRIN2	1p-Del	1	1
GPRIN2	1q-Del	1	1
GPRIN2	4p-Del	1	1
GPRIN2	4q-Del	1	1
GPRIN2	5q-Del	1	1
GPRIN2	6q-Del	1	1
GPRIN2	Amp_3q26.32	1	1
GPRIN2	Amp_4q13.3	1	1
GPRIN2	Amp_6q21	1	1
GPRIN2	Amp_10q22.3	1	1
GPRIN2	Amp_11p13	1	1
GPRIN2	Amp_12p13.33	1	1
GPRIN2	Amp_14q21.1	1	1
GPRIN2	Amp_15q26.3	1	1
GPRIN2	Amp_19p13.12	1	1
GPRIN2	Amp_19q12	1	1
GPRIN2	Amp_19q13.42	1	1
GPRIN2	Del_1p36.13	1	1
GPRIN2	Del_2q37.3	1	1
GPRIN2	Del_3p21.31	1	1
GPRIN2	Del_4p16.3	1	1
GPRIN2	Del_5q11.2	1	1
GPRIN2	Del_5q21.3	1	1
GPRIN2	Del_6q15	1	1
GPRIN2	Del_7p22.3	1	1
GPRIN2	Del_9q21.11	1	1
GPRIN2	Del_9q34.2	1	1
GPRIN2	Del_10q23.31	1	1
GPRIN2	Del_11q23.3	1	1
GPRIN2	Del_12p13.1	1	1
GPRIN2	Del_14q24.1	1	1
GPRIN2	Del_15q13.1	1	1
GPRIN2	Del_18q23	1	1
GPRIN2	Del_19q13.32	1	1
GPRIN2	Del_20p13	1	1
GPS2	HRNR	1	1
GPS2	ICOSLG	1	1
GPS2	IL1RAP	1	1
GPS2	IRS4	1	1
GPS2	KCNN3	1	1
GPS2	KDM6A	1	1
GPS2	KRAS	1	1
GPS2	MED23	1	1
GPS2	MLL3	1	1
GPS2	MUC6	1	1
GPS2	MYH9	1	1
GPS2	NBPF9	1	1
GPS2	NCDN	1	1
GPS2	NCOR1	1	1
GPS2	NF1	1	1
GPS2	NLGN3	1	1
GPS2	PAX2	1	1
GPS2	PIK3R1	1	1
GPS2	PTPN22	1	1
GPS2	RAB42	1	1
GPS2	RB1	1	1
GPS2	RBMX	1	1
GPS2	RUFY1	1	1
GPS2	RUNX1	1	1
GPS2	SF3B1	1	1
GPS2	SMAD2	1	1
GPS2	SMAD4	1	1
GPS2	SP3	1	1
GPS2	TBL1XR1	1	1
GPS2	TBX3	1	1
GPS2	TCP11	1	1
GPS2	TFE3	1	1
GPS2	TGS1	1	1
GPS2	USP36	1	1
GPS2	VCPIP1	1	1
GPS2	ZBTB7C	1	1
GPS2	ZFP36L1	1	1
GPS2	ZFP36L2	1	1
GPS2	ZMYM3	1	1
GPS2	ZNF362	1	1
GPS2	17q-Amp	1	1
GPS2	20p-Amp	1	1
GPS2	20q-Amp	1	1
GPS2	5p-Amp	1	1
GPS2	8p-Amp	1	1
GPS2	13q-Del	1	1
GPS2	14q-Del	1	1
GPS2	15q-Del	1	1
GPS2	16p-Del	1	1
GPS2	17q-Del	1	1
GPS2	1q-Del	1	1
GPS2	4p-Del	1	1
GPS2	4q-Del	1	1
GPS2	5q-Del	1	1
GPS2	9q-Del	1	1
GPS2	Amp_1p22.3	1	1
GPS2	Amp_1q21.3	1	1
GPS2	Amp_1q44	1	1
GPS2	Amp_3p25.1	1	1
GPS2	Amp_4q13.3	1	1
GPS2	Amp_6p23	1	1
GPS2	Amp_10p15.1	1	1
GPS2	Amp_10q22.3	1	1
GPS2	Amp_11p13	1	1
GPS2	Amp_12p13.33	1	1
GPS2	Amp_12q15	1	1
GPS2	Amp_17q23.1	1	1
GPS2	Amp_19p13.12	1	1
GPS2	Amp_19q12	1	1
GPS2	Amp_19q13.42	1	1
GPS2	Amp_20q13.2	1	1
GPS2	Del_2q37.3	1	1
GPS2	Del_4p16.3	1	1
GPS2	Del_4q35.1	1	1
GPS2	Del_5q11.2	1	1
GPS2	Del_5q21.3	1	1
GPS2	Del_7p22.3	1	1
GPS2	Del_7q36.1	1	1
GPS2	Del_9q21.11	1	1
GPS2	Del_9q34.2	1	1
GPS2	Del_11p15.5	1	1
GPS2	Del_12p13.1	1	1
GPS2	Del_12q23.1	1	1
GPS2	Del_12q24.31	1	1
GPS2	Del_13q14.2	1	1
GPS2	Del_15q13.1	1	1
GPS2	Del_19q13.32	1	1
HRNR	ICOSLG	1	1
HRNR	IRS4	1	1
HRNR	KCNN3	1	1
HRNR	MAP2K4	1	1
HRNR	MED23	1	1
HRNR	MYB	1	1
HRNR	MYH9	1	1
HRNR	NCDN	1	1
HRNR	NLGN3	1	1
HRNR	PAX2	1	1
HRNR	PTPN22	1	1
HRNR	RAB42	1	1
HRNR	SF3B1	1	1
HRNR	SMAD4	1	1
HRNR	SP3	1	1
HRNR	TBL1XR1	1	1
HRNR	TCP11	1	1
HRNR	USP36	1	1
HRNR	VCPIP1	1	1
HRNR	ZBTB7C	1	1
HRNR	ZFP36L1	1	1
HRNR	ZFP36L2	1	1
HRNR	ZNF362	1	1
HRNR	Amp_6q21	1	1
HRNR	Amp_19q13.42	1	1
ICOSLG	IRS4	1	1
ICOSLG	KCNN3	1	1
ICOSLG	KDM6A	1	1
ICOSLG	KRAS	1	1
ICOSLG	MAP2K4	1	1
ICOSLG	MAP3K1	1	1
ICOSLG	MED23	1	1
ICOSLG	MUC6	1	1
ICOSLG	MYB	1	1
ICOSLG	NBPF9	1	1
ICOSLG	NCDN	1	1
ICOSLG	NCOR1	1	1
ICOSLG	NF1	1	1
ICOSLG	NLGN3	1	1
ICOSLG	PAX2	1	1
ICOSLG	PTPN22	1	1
ICOSLG	RAB42	1	1
ICOSLG	RB1	1	1
ICOSLG	RBMX	1	1
ICOSLG	RUFY1	1	1
ICOSLG	RUNX1	1	1
ICOSLG	SF3B1	1	1
ICOSLG	SMAD2	1	1
ICOSLG	SMAD4	1	1
ICOSLG	SP3	1	1
ICOSLG	SPEN	1	1
ICOSLG	TAF1L	1	1
ICOSLG	TBL1XR1	1	1
ICOSLG	TBX3	1	1
ICOSLG	TCP11	1	1
ICOSLG	TFE3	1	1
ICOSLG	TGS1	1	1
ICOSLG	TPP2	1	1
ICOSLG	USP36	1	1
ICOSLG	VCPIP1	1	1
ICOSLG	ZBTB7C	1	1
ICOSLG	ZFP36L1	1	1
ICOSLG	ZFP36L2	1	1
ICOSLG	ZMYM3	1	1
ICOSLG	ZNF362	1	1
ICOSLG	17q-Amp	1	1
ICOSLG	5p-Amp	1	1
ICOSLG	7q-Amp	1	1
ICOSLG	8p-Amp	1	1
ICOSLG	14q-Del	1	1
ICOSLG	15q-Del	1	1
ICOSLG	16p-Del	1	1
ICOSLG	17q-Del	1	1
ICOSLG	1q-Del	1	1
ICOSLG	4p-Del	1	1
ICOSLG	4q-Del	1	1
ICOSLG	Amp_3p25.1	1	1
ICOSLG	Amp_3q26.32	1	1
ICOSLG	Amp_4q13.3	1	1
ICOSLG	Amp_6q21	1	1
ICOSLG	Amp_10q22.3	1	1
ICOSLG	Amp_12q15	1	1
ICOSLG	Amp_13q34	1	1
ICOSLG	Amp_14q21.1	1	1
ICOSLG	Amp_15q26.3	1	1
ICOSLG	Amp_17q23.1	1	1
ICOSLG	Amp_19q13.42	1	1
ICOSLG	Del_2q37.3	1	1
ICOSLG	Del_4p16.3	1	1
ICOSLG	Del_6p25.3	1	1
ICOSLG	Del_9p23	1	1
ICOSLG	Del_9q21.11	1	1
ICOSLG	Del_9q34.2	1	1
ICOSLG	Del_10q23.31	1	1
ICOSLG	Del_10q26.3	1	1
ICOSLG	Del_12p13.1	1	1
ICOSLG	Del_14q24.1	1	1
ICOSLG	Del_19q13.32	1	1
ICOSLG	Del_20p13	1	1
ICOSLG	Del_21q11.2	1	1
IL1RAP	KCNN3	1	1
IL1RAP	KDM6A	1	1
IL1RAP	MAP3K1	1	1
IL1RAP	MED23	1	1
IL1RAP	MUC6	1	1
IL1RAP	MYB	1	1
IL1RAP	NBPF9	1	1
IL1RAP	NCDN	1	1
IL1RAP	NLGN3	1	1
IL1RAP	PAX2	1	1
IL1RAP	PTPN22	1	1
IL1RAP	RAB42	1	1
IL1RAP	RUNX1	1	1
IL1RAP	SF3B1	1	1
IL1RAP	SMAD4	1	1
IL1RAP	SP3	1	1
IL1RAP	TBL1XR1	1	1
IL1RAP	TCP11	1	1
IL1RAP	TFE3	1	1
IL1RAP	TGS1	1	1
IL1RAP	USP36	1	1
IL1RAP	ZBTB7C	1	1
IL1RAP	ZFP36L1	1	1
IL1RAP	ZFP36L2	1	1
IL1RAP	ZNF362	1	1
IL1RAP	17q-Amp	1	1
IL1RAP	20p-Amp	1	1
IL1RAP	20q-Amp	1	1
IL1RAP	7p-Amp	1	1
IL1RAP	7q-Amp	1	1
IL1RAP	13q-Del	1	1
IL1RAP	14q-Del	1	1
IL1RAP	15q-Del	1	1
IL1RAP	17q-Del	1	1
IL1RAP	18p-Del	1	1
IL1RAP	18q-Del	1	1
IL1RAP	1p-Del	1	1
IL1RAP	1q-Del	1	1
IL1RAP	22q-Del	1	1
IL1RAP	4q-Del	1	1
IL1RAP	5q-Del	1	1
IL1RAP	9p-Del	1	1
IL1RAP	9q-Del	1	1
IL1RAP	Amp_10q22.3	1	1
IL1RAP	Amp_11p13	1	1
IL1RAP	Amp_12p13.33	1	1
IL1RAP	Amp_14q21.1	1	1
IL1RAP	Amp_19p13.12	1	1
IL1RAP	Amp_19q12	1	1
IL1RAP	Amp_19q13.42	1	1
IL1RAP	Del_4q35.1	1	1
IL1RAP	Del_5q21.3	1	1
IL1RAP	Del_7p22.3	1	1
IL1RAP	Del_7q36.1	1	1
IL1RAP	Del_9p23	1	1
IL1RAP	Del_9q21.11	1	1
IL1RAP	Del_9q34.2	1	1
IL1RAP	Del_10q23.31	1	1
IL1RAP	Del_12p13.1	1	1
IL1RAP	Del_12q23.1	1	1
IL1RAP	Del_12q24.31	1	1
IL1RAP	Del_21q11.2	1	1
IL1RAP	Del_22q13.32	1	1
IRS4	KCNN3	1	1
IRS4	KRAS	1	1
IRS4	MAP3K1	1	1
IRS4	MED23	1	1
IRS4	MUC6	1	1
IRS4	MYB	1	1
IRS4	NBPF9	1	1
IRS4	NCDN	1	1
IRS4	NLGN3	1	1
IRS4	PAX2	1	1
IRS4	PTEN	1	1
IRS4	RAB42	1	1
IRS4	RB1	1	1
IRS4	RUFY1	1	1
IRS4	RUNX1	1	1
IRS4	SF3B1	1	1
IRS4	SMAD4	1	1
IRS4	SP3	1	1
IRS4	TAF1L	1	1
IRS4	TBL1XR1	1	1
IRS4	TBX3	1	1
IRS4	TCP11	1	1
IRS4	TGS1	1	1
IRS4	TPP2	1	1
IRS4	USP36	1	1
IRS4	VCPIP1	1	1
IRS4	ZBTB7C	1	1
IRS4	ZFP36L1	1	1
IRS4	ZFP36L2	1	1
IRS4	ZNF362	1	1
IRS4	17q-Amp	1	1
IRS4	5p-Amp	1	1
IRS4	11p-Del	1	1
IRS4	11q-Del	1	1
IRS4	14q-Del	1	1
IRS4	15q-Del	1	1
IRS4	16p-Del	1	1
IRS4	18p-Del	1	1
IRS4	18q-Del	1	1
IRS4	1p-Del	1	1
IRS4	1q-Del	1	1
IRS4	22q-Del	1	1
IRS4	4p-Del	1	1
IRS4	4q-Del	1	1
IRS4	9p-Del	1	1
IRS4	9q-Del	1	1
IRS4	Amp_3p25.1	1	1
IRS4	Amp_4q13.3	1	1
IRS4	Amp_12p13.33	1	1
IRS4	Amp_14q21.1	1	1
IRS4	Del_1p36.13	1	1
IRS4	Del_1p22.1	1	1
IRS4	Del_2q37.3	1	1
IRS4	Del_4q35.1	1	1
IRS4	Del_5q11.2	1	1
IRS4	Del_6p25.3	1	1
IRS4	Del_7p22.3	1	1
IRS4	Del_7q36.1	1	1
IRS4	Del_9p23	1	1
IRS4	Del_9p21.3	1	1
IRS4	Del_9q21.11	1	1
IRS4	Del_9q34.2	1	1
IRS4	Del_10q23.31	1	1
IRS4	Del_11p15.5	1	1
IRS4	Del_12p13.1	1	1
IRS4	Del_14q24.1	1	1
IRS4	Del_19p13.3	1	1
IRS4	Del_19q13.32	1	1
IRS4	Del_21q11.2	1	1
IRS4	Del_22q13.32	1	1
KCNN3	KDM6A	1	1
KCNN3	KRAS	1	1
KCNN3	MAP2K4	1	1
KCNN3	MED23	1	1
KCNN3	MLL3	1	1
KCNN3	MUC6	1	1
KCNN3	MYB	1	1
KCNN3	MYH9	1	1
KCNN3	NBPF9	1	1
KCNN3	NCOR1	1	1
KCNN3	NF1	1	1
KCNN3	NLGN3	1	1
KCNN3	PAX2	1	1
KCNN3	PIK3R1	1	1
KCNN3	PTEN	1	1
KCNN3	PTPN22	1	1
KCNN3	RAB42	1	1
KCNN3	RB1	1	1
KCNN3	RBMX	1	1
KCNN3	RUFY1	1	1
KCNN3	RUNX1	1	1
KCNN3	SF3B1	1	1
KCNN3	SMAD2	1	1
KCNN3	SMAD4	1	1
KCNN3	SP3	1	1
KCNN3	SPEN	1	1
KCNN3	TAF1L	1	1
KCNN3	TBL1XR1	1	1
KCNN3	TBX3	1	1
KCNN3	TCP11	1	1
KCNN3	TGS1	1	1
KCNN3	TPP2	1	1
KCNN3	USP36	1	1
KCNN3	VCPIP1	1	1
KCNN3	ZBTB7C	1	1
KCNN3	ZFP36L1	1	1
KCNN3	ZFP36L2	1	1
KCNN3	ZMYM3	1	1
KCNN3	ZNF362	1	1
KCNN3	16p-Amp	1	1
KCNN3	5p-Amp	1	1
KCNN3	7p-Amp	1	1
KCNN3	7q-Amp	1	1
KCNN3	8p-Amp	1	1
KCNN3	11p-Del	1	1
KCNN3	11q-Del	1	1
KCNN3	16p-Del	1	1
KCNN3	17q-Del	1	1
KCNN3	4p-Del	1	1
KCNN3	4q-Del	1	1
KCNN3	Amp_3p25.1	1	1
KCNN3	Amp_4q13.3	1	1
KCNN3	Amp_11p13	1	1
KCNN3	Amp_12q15	1	1
KCNN3	Amp_13q34	1	1
KCNN3	Amp_14q21.1	1	1
KCNN3	Amp_19q12	1	1
KCNN3	Del_7q36.1	1	1
KCNN3	Del_11q13.1	1	1
KCNN3	Del_11q25	1	1
KCNN3	Del_19q13.32	1	1
KCNN3	Del_20p13	1	1
KDM6A	KRAS	1	1
KDM6A	MYB	1	1
KDM6A	NBPF9	1	1
KDM6A	NCDN	1	1
KDM6A	PAX2	1	1
KDM6A	PIK3R1	1	1
KDM6A	RAB42	1	1
KDM6A	RB1	1	1
KDM6A	TBL1XR1	1	1
KDM6A	TBX3	1	1
KDM6A	TPP2	1	1
KDM6A	ZBTB7C	1	1
KDM6A	ZFP36L2	1	1
KDM6A	16p-Amp	1	1
KDM6A	5p-Amp	1	1
KDM6A	7p-Amp	1	1
KDM6A	7q-Amp	1	1
KDM6A	14q-Del	1	1
KDM6A	16p-Del	1	1
KDM6A	1q-Del	1	1
KDM6A	5q-Del	1	1
KDM6A	9p-Del	1	1
KDM6A	9q-Del	1	1
KDM6A	Amp_1p22.3	1	1
KDM6A	Amp_4q13.3	1	1
KDM6A	Amp_6p23	1	1
KDM6A	Amp_10q22.3	1	1
KDM6A	Amp_12q15	1	1
KDM6A	Amp_19p13.12	1	1
KDM6A	Amp_19q13.42	1	1
KDM6A	Del_5q11.2	1	1
KDM6A	Del_7p22.3	1	1
KDM6A	Del_7q36.1	1	1
KDM6A	Del_9p23	1	1
KDM6A	Del_9q34.2	1	1
KDM6A	Del_12q23.1	1	1
KDM6A	Del_14q24.1	1	1
KDM6A	Del_19p13.3	1	1
KDM6A	Del_19q13.32	1	1
KDM6A	Del_20p13	1	1
KDM6A	Del_21q11.2	1	1
KRAS	MAP3K1	1	1
KRAS	MED23	1	1
KRAS	MUC6	1	1
KRAS	MYB	1	1
KRAS	MYH9	1	1
KRAS	NBPF9	1	1
KRAS	NCDN	1	1
KRAS	NLGN3	1	1
KRAS	PAX2	1	1
KRAS	PTPN22	1	1
KRAS	RAB42	1	1
KRAS	RUNX1	1	1
KRAS	SF3B1	1	1
KRAS	SMAD4	1	1
KRAS	SP3	1	1
KRAS	TBL1XR1	1	1
KRAS	TCP11	1	1
KRAS	TFE3	1	1
KRAS	TGS1	1	1
KRAS	USP36	1	1
KRAS	VCPIP1	1	1
KRAS	ZBTB7C	1	1
KRAS	ZFP36L1	1	1
KRAS	ZFP36L2	1	1
KRAS	ZNF362	1	1
KRAS	17q-Amp	1	1
KRAS	20p-Amp	1	1
KRAS	20q-Amp	1	1
KRAS	5p-Amp	1	1
KRAS	7p-Amp	1	1
KRAS	7q-Amp	1	1
KRAS	8p-Amp	1	1
KRAS	11p-Del	1	1
KRAS	11q-Del	1	1
KRAS	13q-Del	1	1
KRAS	14q-Del	1	1
KRAS	15q-Del	1	1
KRAS	17q-Del	1	1
KRAS	18p-Del	1	1
KRAS	18q-Del	1	1
KRAS	1p-Del	1	1
KRAS	1q-Del	1	1
KRAS	22q-Del	1	1
KRAS	4p-Del	1	1
KRAS	4q-Del	1	1
KRAS	5q-Del	1	1
KRAS	6q-Del	1	1
KRAS	9p-Del	1	1
KRAS	9q-Del	1	1
KRAS	Amp_3p25.1	1	1
KRAS	Amp_3q26.32	1	1
KRAS	Amp_4q13.3	1	1
KRAS	Amp_6p23	1	1
KRAS	Amp_6q21	1	1
KRAS	Amp_8p11.23	1	1
KRAS	Amp_8p11.21	1	1
KRAS	Amp_10p15.1	1	1
KRAS	Amp_10q22.3	1	1
KRAS	Amp_11p13	1	1
KRAS	Amp_11q13.3	1	1
KRAS	Amp_11q14.1	1	1
KRAS	Amp_12p13.33	1	1
KRAS	Amp_12q15	1	1
KRAS	Amp_13q34	1	1
KRAS	Amp_14q21.1	1	1
KRAS	Amp_15q26.3	1	1
KRAS	Amp_17q12	1	1
KRAS	Amp_17q23.1	1	1
KRAS	Amp_19p13.12	1	1
KRAS	Amp_19q12	1	1
KRAS	Amp_19q13.42	1	1
KRAS	Amp_20q13.2	1	1
KRAS	Del_1p36.13	1	1
KRAS	Del_1p22.1	1	1
KRAS	Del_2q37.3	1	1
KRAS	Del_3p21.31	1	1
KRAS	Del_4p16.3	1	1
KRAS	Del_4q35.1	1	1
KRAS	Del_5q11.2	1	1
KRAS	Del_5q21.3	1	1
KRAS	Del_6p25.3	1	1
KRAS	Del_6q15	1	1
KRAS	Del_6q27	1	1
KRAS	Del_7p22.3	1	1
KRAS	Del_7q36.1	1	1
KRAS	Del_9p23	1	1
KRAS	Del_9p21.3	1	1
KRAS	Del_9q21.11	1	1
KRAS	Del_9q34.2	1	1
KRAS	Del_10q23.31	1	1
KRAS	Del_10q26.3	1	1
KRAS	Del_11p15.5	1	1
KRAS	Del_11q13.1	1	1
KRAS	Del_11q23.3	1	1
KRAS	Del_11q25	1	1
KRAS	Del_12p13.1	1	1
KRAS	Del_12q23.1	1	1
KRAS	Del_12q24.31	1	1
KRAS	Del_13q14.2	1	1
KRAS	Del_14q24.1	1	1
KRAS	Del_15q13.1	1	1
KRAS	Del_17q21.31	1	1
KRAS	Del_18q23	1	1
KRAS	Del_19p13.3	1	1
KRAS	Del_19q13.32	1	1
KRAS	Del_20p13	1	1
KRAS	Del_21q11.2	1	1
KRAS	Del_22q13.32	1	1
MAP2K4	MUC6	1	1
MAP2K4	MYB	1	1
MAP2K4	MYH9	1	1
MAP2K4	NBPF9	1	1
MAP2K4	NCDN	1	1
MAP2K4	PAX2	1	1
MAP2K4	PIK3R1	1	1
MAP2K4	PTEN	1	1
MAP2K4	RAB42	1	1
MAP2K4	RB1	1	1
MAP2K4	RUFY1	1	1
MAP2K4	RUNX1	1	1
MAP2K4	SF3B1	1	1
MAP2K4	SMAD4	1	1
MAP2K4	SP3	1	1
MAP2K4	TAF1L	1	1
MAP2K4	TBL1XR1	1	1
MAP2K4	TCP11	1	1
MAP2K4	TPP2	1	1
MAP2K4	USP36	1	1
MAP2K4	VCPIP1	1	1
MAP2K4	ZBTB7C	1	1
MAP2K4	ZFP36L1	1	1
MAP2K4	5q-Del	1	1
MAP2K4	Amp_3p25.1	1	1
MAP2K4	Amp_4q13.3	1	1
MAP2K4	Amp_6q21	1	1
MAP2K4	Amp_19p13.12	1	1
MAP2K4	Del_5q11.2	1	1
MAP2K4	Del_7p22.3	1	1
MAP2K4	Del_12p13.1	1	1
MAP2K4	Del_19p13.3	1	1
MAP2K4	Del_19q13.32	1	1
MAP3K1	NCOR1	1	1
MAP3K1	RAB42	1	1
MAP3K1	RB1	1	1
MAP3K1	RUFY1	1	1
MAP3K1	SMAD2	1	1
MAP3K1	TFE3	1	1
MAP3K1	TP53	1	1
MAP3K1	TPP2	1	1
MAP3K1	VCPIP1	1	1
MAP3K1	ZBTB7C	1	1
MAP3K1	ZNF362	1	1
MAP3K1	16p-Del	1	1
MAP3K1	5q-Del	1	1
MAP3K1	Amp_6p23	1	1
MAP3K1	Amp_10p15.1	1	1
MAP3K1	Del_12q23.1	1	1
MAP3K1	Del_12q24.31	1	1
MAP3K1	Del_19q13.32	1	1
MED23	MUC6	1	1
MED23	MYB	1	1
MED23	MYH9	1	1
MED23	NBPF9	1	1
MED23	NCDN	1	1
MED23	NCOR1	1	1
MED23	PAX2	1	1
MED23	PIK3R1	1	1
MED23	PTEN	1	1
MED23	PTPN22	1	1
MED23	RAB42	1	1
MED23	RB1	1	1
MED23	RUFY1	1	1
MED23	RUNX1	1	1
MED23	SF3B1	1	1
MED23	SMAD2	1	1
MED23	SMAD4	1	1
MED23	SP3	1	1
MED23	SPEN	1	1
MED23	TAF1L	1	1
MED23	TBL1XR1	1	1
MED23	TCP11	1	1
MED23	TGS1	1	1
MED23	TPP2	1	1
MED23	USP36	1	1
MED23	VCPIP1	1	1
MED23	ZFP36L1	1	1
MED23	ZFP36L2	1	1
MED23	17q-Amp	1	1
MED23	20p-Amp	1	1
MED23	5p-Amp	1	1
MED23	7p-Amp	1	1
MED23	7q-Amp	1	1
MED23	11p-Del	1	1
MED23	13q-Del	1	1
MED23	14q-Del	1	1
MED23	15q-Del	1	1
MED23	1q-Del	1	1
MED23	5q-Del	1	1
MED23	9p-Del	1	1
MED23	9q-Del	1	1
MED23	Amp_4q13.3	1	1
MED23	Amp_6q21	1	1
MED23	Amp_11p13	1	1
MED23	Amp_12p13.33	1	1
MED23	Amp_12q15	1	1
MED23	Amp_13q34	1	1
MED23	Amp_15q26.3	1	1
MED23	Amp_19p13.12	1	1
MED23	Amp_19q12	1	1
MED23	Amp_19q13.42	1	1
MED23	Del_2q37.3	1	1
MED23	Del_5q11.2	1	1
MED23	Del_7p22.3	1	1
MED23	Del_9p23	1	1
MED23	Del_9p21.3	1	1
MED23	Del_9q21.11	1	1
MED23	Del_9q34.2	1	1
MED23	Del_11p15.5	1	1
MED23	Del_19q13.32	1	1
MLL3	NCDN	1	1
MLL3	PAX2	1	1
MLL3	RAB42	1	1
MLL3	ZBTB7C	1	1
MLL3	ZFP36L1	1	1
MLL3	ZFP36L2	1	1
MLL3	1p-Del	1	1
MLL3	1q-Del	1	1
MLL3	Del_20p13	1	1
MUC6	MYB	1	1
MUC6	NLGN3	1	1
MUC6	PAX2	1	1
MUC6	PIK3R1	1	1
MUC6	PTEN	1	1
MUC6	RAB42	1	1
MUC6	RB1	1	1
MUC6	RUFY1	1	1
MUC6	RUNX1	1	1
MUC6	SMAD2	1	1
MUC6	TAF1L	1	1
MUC6	TBL1XR1	1	1
MUC6	TBX3	1	1
MUC6	TCP11	1	1
MUC6	TFE3	1	1
MUC6	TPP2	1	1
MUC6	USP36	1	1
MUC6	VCPIP1	1	1
MUC6	ZBTB7C	1	1
MUC6	ZFP36L1	1	1
MUC6	ZFP36L2	1	1
MUC6	ZMYM3	1	1
MUC6	ZNF362	1	1
MUC6	7p-Amp	1	1
MUC6	7q-Amp	1	1
MUC6	8p-Amp	1	1
MUC6	18p-Del	1	1
MUC6	6q-Del	1	1
MUC6	Amp_3p25.1	1	1
MUC6	Amp_3q26.32	1	1
MUC6	Amp_4q13.3	1	1
MUC6	Amp_10p15.1	1	1
MUC6	Amp_10q22.3	1	1
MUC6	Amp_14q21.1	1	1
MUC6	Amp_19p13.12	1	1
MUC6	Amp_19q12	1	1
MUC6	Del_1p36.13	1	1
MUC6	Del_6p25.3	1	1
MUC6	Del_11p15.5	1	1
MUC6	Del_11q13.1	1	1
MUC6	Del_12q23.1	1	1
MUC6	Del_12q24.31	1	1
MYB	MYH9	1	1
MYB	NBPF9	1	1
MYB	NCDN	1	1
MYB	NF1	1	1
MYB	NLGN3	1	1
MYB	PIK3R1	1	1
MYB	PTEN	1	1
MYB	PTPN22	1	1
MYB	RAB42	1	1
MYB	RBMX	1	1
MYB	RUFY1	1	1
MYB	RUNX1	1	1
MYB	SF3B1	1	1
MYB	SMAD2	1	1
MYB	SMAD4	1	1
MYB	SP3	1	1
MYB	SPEN	1	1
MYB	TCP11	1	1
MYB	TFE3	1	1
MYB	TGS1	1	1
MYB	TPP2	1	1
MYB	USP36	1	1
MYB	VCPIP1	1	1
MYB	ZBTB7C	1	1
MYB	ZFP36L1	1	1
MYB	ZFP36L2	1	1
MYB	ZNF362	1	1
MYB	17q-Amp	1	1
MYB	5p-Amp	1	1
MYB	7p-Amp	1	1
MYB	7q-Amp	1	1
MYB	13q-Del	1	1
MYB	15q-Del	1	1
MYB	16p-Del	1	1
MYB	17q-Del	1	1
MYB	18p-Del	1	1
MYB	18q-Del	1	1
MYB	1p-Del	1	1
MYB	1q-Del	1	1
MYB	4p-Del	1	1
MYB	4q-Del	1	1
MYB	5q-Del	1	1
MYB	8p-Del	1	1
MYB	9p-Del	1	1
MYB	9q-Del	1	1
MYB	Amp_4q13.3	1	1
MYB	Amp_6q21	1	1
MYB	Amp_8p11.23	1	1
MYB	Amp_10q22.3	1	1
MYB	Amp_11q13.3	1	1
MYB	Amp_11q14.1	1	1
MYB	Amp_12p13.33	1	1
MYB	Amp_12q15	1	1
MYB	Amp_13q34	1	1
MYB	Amp_14q21.1	1	1
MYB	Amp_15q26.3	1	1
MYB	Amp_19p13.12	1	1
MYB	Amp_19q12	1	1
MYB	Amp_19q13.42	1	1
MYB	Del_1p36.13	1	1
MYB	Del_1p22.1	1	1
MYB	Del_2q37.3	1	1
MYB	Del_3p21.31	1	1
MYB	Del_4p16.3	1	1
MYB	Del_4q35.1	1	1
MYB	Del_5q11.2	1	1
MYB	Del_6p25.3	1	1
MYB	Del_7p22.3	1	1
MYB	Del_7q36.1	1	1
MYB	Del_9p23	1	1
MYB	Del_9p21.3	1	1
MYB	Del_9q21.11	1	1
MYB	Del_10q23.31	1	1
MYB	Del_10q26.3	1	1
MYB	Del_12p13.1	1	1
MYB	Del_12q23.1	1	1
MYB	Del_12q24.31	1	1
MYB	Del_13q14.2	1	1
MYB	Del_15q13.1	1	1
MYB	Del_19p13.3	1	1
MYB	Del_19q13.32	1	1
MYB	Del_20p13	1	1
MYB	Del_21q11.2	1	1
MYH9	NBPF9	1	1
MYH9	PAX2	1	1
MYH9	PTEN	1	1
MYH9	RAB42	1	1
MYH9	RB1	1	1
MYH9	RUFY1	1	1
MYH9	SMAD2	1	1
MYH9	TBX3	1	1
MYH9	TFE3	1	1
MYH9	TPP2	1	1
MYH9	VCPIP1	1	1
MYH9	ZBTB7C	1	1
MYH9	ZFP36L1	1	1
MYH9	ZFP36L2	1	1
MYH9	ZNF362	1	1
MYH9	5p-Amp	1	1
MYH9	7p-Amp	1	1
MYH9	7q-Amp	1	1
MYH9	8p-Amp	1	1
MYH9	8q-Amp	1	1
MYH9	11p-Del	1	1
MYH9	15q-Del	1	1
MYH9	16p-Del	1	1
MYH9	18p-Del	1	1
MYH9	18q-Del	1	1
MYH9	1p-Del	1	1
MYH9	1q-Del	1	1
MYH9	4p-Del	1	1
MYH9	4q-Del	1	1
MYH9	5q-Del	1	1
MYH9	9p-Del	1	1
MYH9	9q-Del	1	1
MYH9	Amp_3p25.1	1	1
MYH9	Amp_4q13.3	1	1
MYH9	Amp_10q22.3	1	1
MYH9	Amp_11p13	1	1
MYH9	Amp_12p13.33	1	1
MYH9	Amp_13q34	1	1
MYH9	Amp_14q21.1	1	1
MYH9	Amp_19q13.42	1	1
MYH9	Del_1p22.1	1	1
MYH9	Del_4p16.3	1	1
MYH9	Del_4q35.1	1	1
MYH9	Del_5q11.2	1	1
MYH9	Del_5q21.3	1	1
MYH9	Del_7p22.3	1	1
MYH9	Del_9q21.11	1	1
MYH9	Del_9q34.2	1	1
MYH9	Del_10q23.31	1	1
MYH9	Del_11p15.5	1	1
MYH9	Del_12q23.1	1	1
MYH9	Del_12q24.31	1	1
MYH9	Del_19q13.32	1	1
MYH9	Del_21q11.2	1	1
NBPF9	NCDN	1	1
NBPF9	NCOR1	1	1
NBPF9	NLGN3	1	1
NBPF9	PAX2	1	1
NBPF9	PIK3R1	1	1
NBPF9	PTEN	1	1
NBPF9	PTPN22	1	1
NBPF9	RAB42	1	1
NBPF9	RB1	1	1
NBPF9	RBMX	1	1
NBPF9	RUFY1	1	1
NBPF9	RUNX1	1	1
NBPF9	SF3B1	1	1
NBPF9	SMAD2	1	1
NBPF9	SMAD4	1	1
NBPF9	SP3	1	1
NBPF9	SPEN	1	1
NBPF9	TAF1L	1	1
NBPF9	TBL1XR1	1	1
NBPF9	TBX3	1	1
NBPF9	TCP11	1	1
NBPF9	TFE3	1	1
NBPF9	TGS1	1	1
NBPF9	TPP2	1	1
NBPF9	USP36	1	1
NBPF9	VCPIP1	1	1
NBPF9	ZBTB7C	1	1
NBPF9	ZFP36L2	1	1
NBPF9	ZMYM3	1	1
NBPF9	ZNF362	1	1
NBPF9	20p-Amp	1	1
NBPF9	5p-Amp	1	1
NBPF9	7q-Amp	1	1
NBPF9	11p-Del	1	1
NBPF9	11q-Del	1	1
NBPF9	4p-Del	1	1
NBPF9	4q-Del	1	1
NBPF9	6q-Del	1	1
NBPF9	9q-Del	1	1
NBPF9	Amp_3p25.1	1	1
NBPF9	Amp_6p23	1	1
NBPF9	Amp_6q21	1	1
NBPF9	Amp_10p15.1	1	1
NBPF9	Amp_10q22.3	1	1
NBPF9	Amp_11p13	1	1
NBPF9	Amp_11q14.1	1	1
NBPF9	Amp_17q12	1	1
NBPF9	Amp_19p13.12	1	1
NBPF9	Amp_19q12	1	1
NBPF9	Amp_19q13.42	1	1
NBPF9	Del_4p16.3	1	1
NBPF9	Del_6p25.3	1	1
NBPF9	Del_6q27	1	1
NBPF9	Del_7p22.3	1	1
NBPF9	Del_7q36.1	1	1
NBPF9	Del_9q21.11	1	1
NBPF9	Del_11q13.1	1	1
NBPF9	Del_11q23.3	1	1
NBPF9	Del_11q25	1	1
NBPF9	Del_12q23.1	1	1
NBPF9	Del_12q24.31	1	1
NBPF9	Del_19q13.32	1	1
NBPF9	Del_20p13	1	1
NBPF9	Del_21q11.2	1	1
NCDN	NF1	1	1
NCDN	NLGN3	1	1
NCDN	PAX2	1	1
NCDN	PIK3R1	1	1
NCDN	PTEN	1	1
NCDN	PTPN22	1	1
NCDN	RAB42	1	1
NCDN	RB1	1	1
NCDN	RUFY1	1	1
NCDN	RUNX1	1	1
NCDN	SF3B1	1	1
NCDN	SMAD2	1	1
NCDN	SMAD4	1	1
NCDN	SP3	1	1
NCDN	TAF1L	1	1
NCDN	TBL1XR1	1	1
NCDN	TBX3	1	1
NCDN	TCP11	1	1
NCDN	TFE3	1	1
NCDN	TGS1	1	1
NCDN	TPP2	1	1
NCDN	USP36	1	1
NCDN	VCPIP1	1	1
NCDN	ZBTB7C	1	1
NCDN	ZFP36L1	1	1
NCDN	ZFP36L2	1	1
NCDN	ZMYM3	1	1
NCDN	ZNF362	1	1
NCDN	17q-Amp	1	1
NCDN	5p-Amp	1	1
NCDN	7q-Amp	1	1
NCDN	8p-Amp	1	1
NCDN	8q-Amp	1	1
NCDN	11p-Del	1	1
NCDN	11q-Del	1	1
NCDN	13q-Del	1	1
NCDN	14q-Del	1	1
NCDN	15q-Del	1	1
NCDN	16p-Del	1	1
NCDN	17p-Del	1	1
NCDN	17q-Del	1	1
NCDN	18p-Del	1	1
NCDN	18q-Del	1	1
NCDN	1p-Del	1	1
NCDN	1q-Del	1	1
NCDN	5q-Del	1	1
NCDN	6q-Del	1	1
NCDN	9q-Del	1	1
NCDN	Amp_4q13.3	1	1
NCDN	Amp_8p11.23	1	1
NCDN	Amp_8p11.21	1	1
NCDN	Amp_10p15.1	1	1
NCDN	Amp_10q22.3	1	1
NCDN	Amp_11p13	1	1
NCDN	Amp_12q15	1	1
NCDN	Amp_13q34	1	1
NCDN	Amp_14q21.1	1	1
NCDN	Amp_15q26.3	1	1
NCDN	Amp_19p13.12	1	1
NCDN	Amp_19q12	1	1
NCDN	Amp_19q13.42	1	1
NCDN	Del_1p22.1	1	1
NCDN	Del_4p16.3	1	1
NCDN	Del_6q15	1	1
NCDN	Del_6q27	1	1
NCDN	Del_9q21.11	1	1
NCDN	Del_10q23.31	1	1
NCDN	Del_10q26.3	1	1
NCDN	Del_11p15.5	1	1
NCDN	Del_11q13.1	1	1
NCDN	Del_12q23.1	1	1
NCDN	Del_12q24.31	1	1
NCDN	Del_13q14.2	1	1
NCDN	Del_15q13.1	1	1
NCDN	Del_17p12	1	1
NCDN	Del_17q21.31	1	1
NCDN	Del_18q23	1	1
NCDN	Del_19p13.3	1	1
NCDN	Del_19q13.32	1	1
NCDN	Del_20p13	1	1
NCDN	Del_21q11.2	1	1
NCOR1	PAX2	1	1
NCOR1	PTPN22	1	1
NCOR1	RAB42	1	1
NCOR1	SP3	1	1
NCOR1	TBL1XR1	1	1
NCOR1	TCP11	1	1
NCOR1	USP36	1	1
NCOR1	ZBTB7C	1	1
NCOR1	ZFP36L1	1	1
NCOR1	ZFP36L2	1	1
NCOR1	ZNF362	1	1
NCOR1	7p-Amp	1	1
NCOR1	7q-Amp	1	1
NCOR1	1q-Del	1	1
NCOR1	6q-Del	1	1
NCOR1	Amp_10q22.3	1	1
NCOR1	Amp_12q15	1	1
NCOR1	Amp_19q13.42	1	1
NCOR1	Del_6p25.3	1	1
NCOR1	Del_6q15	1	1
NCOR1	Del_9q34.2	1	1
NCOR1	Del_10q26.3	1	1
NF1	PAX2	1	1
NF1	RAB42	1	1
NF1	TBL1XR1	1	1
NF1	TFE3	1	1
NF1	ZFP36L1	1	1
NF1	ZNF362	1	1
NF1	5p-Amp	1	1
NF1	7q-Amp	1	1
NF1	14q-Del	1	1
NF1	Amp_3p25.1	1	1
NF1	Amp_10q22.3	1	1
NF1	Amp_19p13.12	1	1
NF1	Amp_19q12	1	1
NF1	Amp_19q13.42	1	1
NF1	Del_4p16.3	1	1
NF1	Del_7p22.3	1	1
NF1	Del_9q21.11	1	1
NF1	Del_12q23.1	1	1
NF1	Del_12q24.31	1	1
NF1	Del_14q24.1	1	1
NF1	Del_21q11.2	1	1
NLGN3	PAX2	1	1
NLGN3	PIK3R1	1	1
NLGN3	RAB42	1	1
NLGN3	RB1	1	1
NLGN3	RBMX	1	1
NLGN3	SF3B1	1	1
NLGN3	SP3	1	1
NLGN3	TBL1XR1	1	1
NLGN3	TBX3	1	1
NLGN3	TPP2	1	1
NLGN3	ZBTB7C	1	1
NLGN3	ZFP36L1	1	1
NLGN3	ZFP36L2	1	1
NLGN3	17q-Amp	1	1
NLGN3	5p-Amp	1	1
NLGN3	7q-Amp	1	1
NLGN3	11p-Del	1	1
NLGN3	13q-Del	1	1
NLGN3	14q-Del	1	1
NLGN3	16p-Del	1	1
NLGN3	1p-Del	1	1
NLGN3	1q-Del	1	1
NLGN3	4p-Del	1	1
NLGN3	4q-Del	1	1
NLGN3	5q-Del	1	1
NLGN3	8p-Del	1	1
NLGN3	9q-Del	1	1
NLGN3	Amp_3p25.1	1	1
NLGN3	Amp_4q13.3	1	1
NLGN3	Amp_6p23	1	1
NLGN3	Amp_6q21	1	1
NLGN3	Amp_10p15.1	1	1
NLGN3	Amp_10q22.3	1	1
NLGN3	Amp_11p13	1	1
NLGN3	Amp_11q14.1	1	1
NLGN3	Amp_12q15	1	1
NLGN3	Amp_13q34	1	1
NLGN3	Amp_14q21.1	1	1
NLGN3	Amp_15q26.3	1	1
NLGN3	Amp_17q12	1	1
NLGN3	Amp_19p13.12	1	1
NLGN3	Amp_19q12	1	1
NLGN3	Amp_19q13.42	1	1
NLGN3	Del_1p36.13	1	1
NLGN3	Del_1p22.1	1	1
NLGN3	Del_2q37.3	1	1
NLGN3	Del_4p16.3	1	1
NLGN3	Del_4q35.1	1	1
NLGN3	Del_5q11.2	1	1
NLGN3	Del_6p25.3	1	1
NLGN3	Del_7p22.3	1	1
NLGN3	Del_9q21.11	1	1
NLGN3	Del_9q34.2	1	1
NLGN3	Del_10q23.31	1	1
NLGN3	Del_10q26.3	1	1
NLGN3	Del_11p15.5	1	1
NLGN3	Del_12p13.1	1	1
NLGN3	Del_12q23.1	1	1
NLGN3	Del_13q14.2	1	1
NLGN3	Del_14q24.1	1	1
NLGN3	Del_19p13.3	1	1
NLGN3	Del_19q13.32	1	1
NLGN3	Del_20p13	1	1
PAX2	PIK3CA	1	1
PAX2	PIK3R1	1	1
PAX2	PTPN22	1	1
PAX2	RAB42	1	1
PAX2	RB1	1	1
PAX2	RBMX	1	1
PAX2	RUFY1	1	1
PAX2	RUNX1	1	1
PAX2	SF3B1	1	1
PAX2	SMAD2	1	1
PAX2	SMAD4	1	1
PAX2	SP3	1	1
PAX2	SPEN	1	1
PAX2	TAF1L	1	1
PAX2	TBL1XR1	1	1
PAX2	TCP11	1	1
PAX2	TFE3	1	1
PAX2	TGS1	1	1
PAX2	TPP2	1	1
PAX2	USP36	1	1
PAX2	VCPIP1	1	1
PAX2	ZBTB7C	1	1
PAX2	ZFP36L1	1	1
PAX2	ZFP36L2	1	1
PAX2	17q-Amp	1	1
PAX2	20p-Amp	1	1
PAX2	20q-Amp	1	1
PAX2	5p-Amp	1	1
PAX2	7p-Amp	1	1
PAX2	7q-Amp	1	1
PAX2	11p-Del	1	1
PAX2	14q-Del	1	1
PAX2	15q-Del	1	1
PAX2	16p-Del	1	1
PAX2	17q-Del	1	1
PAX2	1p-Del	1	1
PAX2	1q-Del	1	1
PAX2	5q-Del	1	1
PAX2	6q-Del	1	1
PAX2	Amp_1p22.3	1	1
PAX2	Amp_1q21.3	1	1
PAX2	Amp_3p25.1	1	1
PAX2	Amp_4q13.3	1	1
PAX2	Amp_6p23	1	1
PAX2	Amp_6q21	1	1
PAX2	Amp_8p11.23	1	1
PAX2	Amp_10p15.1	1	1
PAX2	Amp_10q22.3	1	1
PAX2	Amp_11p13	1	1
PAX2	Amp_12q15	1	1
PAX2	Amp_14q21.1	1	1
PAX2	Amp_19p13.12	1	1
PAX2	Amp_19q13.42	1	1
PAX2	Amp_20q13.2	1	1
PAX2	Del_2q37.3	1	1
PAX2	Del_5q11.2	1	1
PAX2	Del_5q21.3	1	1
PAX2	Del_6q27	1	1
PAX2	Del_7p22.3	1	1
PAX2	Del_11q13.1	1	1
PAX2	Del_12p13.1	1	1
PAX2	Del_12q24.31	1	1
PAX2	Del_15q13.1	1	1
PAX2	Del_17q21.31	1	1
PIK3CA	TP53	1	1
PIK3CA	8q-Amp	1	1
PIK3CA	14q-Del	1	1
PIK3CA	1q-Del	1	1
PIK3CA	5q-Del	1	1
PIK3CA	Amp_6p23	1	1
PIK3CA	Amp_8q24.21	1	1
PIK3CA	Amp_10p15.1	1	1
PIK3CA	Amp_12p13.33	1	1
PIK3CA	Amp_15q26.3	1	1
PIK3CA	Amp_17q23.1	1	1
PIK3CA	Amp_19q12	1	1
PIK3CA	Del_2q37.3	1	1
PIK3CA	Del_5q11.2	1	1
PIK3CA	Del_5q21.3	1	1
PIK3CA	Del_10q23.31	1	1
PIK3CA	Del_13q14.2	1	1
PIK3CA	Del_14q24.1	1	1
PIK3CA	Del_20p13	1	1
PIK3R1	PTPN22	1	1
PIK3R1	RAB42	1	1
PIK3R1	RUNX1	1	1
PIK3R1	SF3B1	1	1
PIK3R1	SMAD4	1	1
PIK3R1	SP3	1	1
PIK3R1	TCP11	1	1
PIK3R1	TFE3	1	1
PIK3R1	TGS1	1	1
PIK3R1	USP36	1	1
PIK3R1	VCPIP1	1	1
PIK3R1	ZBTB7C	1	1
PIK3R1	ZFP36L1	1	1
PIK3R1	ZFP36L2	1	1
PIK3R1	ZNF362	1	1
PIK3R1	16p-Amp	1	1
PIK3R1	17q-Amp	1	1
PIK3R1	7q-Amp	1	1
PIK3R1	8p-Amp	1	1
PIK3R1	14q-Del	1	1
PIK3R1	1p-Del	1	1
PIK3R1	1q-Del	1	1
PIK3R1	Amp_3p25.1	1	1
PIK3R1	Amp_6q21	1	1
PIK3R1	Amp_10q22.3	1	1
PIK3R1	Amp_11p13	1	1
PIK3R1	Amp_12p13.33	1	1
PIK3R1	Amp_13q34	1	1
PIK3R1	Del_2q37.3	1	1
PIK3R1	Del_6p25.3	1	1
PIK3R1	Del_12q24.31	1	1
PTEN	PTPN22	1	1
PTEN	RAB42	1	1
PTEN	SMAD4	1	1
PTEN	SP3	1	1
PTEN	TCP11	1	1
PTEN	TFE3	1	1
PTEN	TGS1	1	1
PTEN	USP36	1	1
PTEN	ZFP36L1	1	1
PTEN	ZNF362	1	1
PTEN	16p-Amp	1	1
PTEN	5p-Amp	1	1
PTEN	7q-Amp	1	1
PTEN	15q-Del	1	1
PTEN	17q-Del	1	1
PTEN	1q-Del	1	1
PTEN	5q-Del	1	1
PTEN	Amp_4q13.3	1	1
PTEN	Amp_11p13	1	1
PTEN	Amp_12q15	1	1
PTEN	Amp_13q34	1	1
PTEN	Del_2q37.3	1	1
PTEN	Del_5q21.3	1	1
PTEN	Del_12p13.1	1	1
PTEN	Del_15q13.1	1	1
PTEN	Del_19q13.32	1	1
PTPN22	RAB42	1	1
PTPN22	RB1	1	1
PTPN22	RBMX	1	1
PTPN22	SMAD2	1	1
PTPN22	TAF1L	1	1
PTPN22	TBL1XR1	1	1
PTPN22	TBX3	1	1
PTPN22	TFE3	1	1
PTPN22	USP36	1	1
PTPN22	ZBTB7C	1	1
PTPN22	ZFP36L1	1	1
PTPN22	ZFP36L2	1	1
PTPN22	ZMYM3	1	1
PTPN22	ZNF362	1	1
PTPN22	5p-Amp	1	1
PTPN22	7p-Amp	1	1
PTPN22	7q-Amp	1	1
PTPN22	11p-Del	1	1
PTPN22	11q-Del	1	1
PTPN22	14q-Del	1	1
PTPN22	15q-Del	1	1
PTPN22	1p-Del	1	1
PTPN22	1q-Del	1	1
PTPN22	5q-Del	1	1
PTPN22	6q-Del	1	1
PTPN22	9p-Del	1	1
PTPN22	Amp_1p22.3	1	1
PTPN22	Amp_4q13.3	1	1
PTPN22	Amp_6q21	1	1
PTPN22	Amp_10p15.1	1	1
PTPN22	Amp_11p13	1	1
PTPN22	Amp_12p13.33	1	1
PTPN22	Amp_13q34	1	1
PTPN22	Amp_19q12	1	1
PTPN22	Del_1p36.13	1	1
PTPN22	Del_1p22.1	1	1
PTPN22	Del_5q11.2	1	1
PTPN22	Del_5q21.3	1	1
PTPN22	Del_7q36.1	1	1
PTPN22	Del_9p23	1	1
PTPN22	Del_11q13.1	1	1
PTPN22	Del_19q13.32	1	1
RAB42	RB1	1	1
RAB42	RBMX	1	1
RAB42	RUFY1	1	1
RAB42	RUNX1	1	1
RAB42	SF3B1	1	1
RAB42	SMAD2	1	1
RAB42	SMAD4	1	1
RAB42	SP3	1	1
RAB42	SPEN	1	1
RAB42	TAF1L	1	1
RAB42	TBL1XR1	1	1
RAB42	TBX3	1	1
RAB42	TCP11	1	1
RAB42	TFE3	1	1
RAB42	TGS1	1	1
RAB42	TPP2	1	1
RAB42	USP36	1	1
RAB42	VCPIP1	1	1
RAB42	ZBTB7C	1	1
RAB42	ZFP36L1	1	1
RAB42	ZFP36L2	1	1
RAB42	ZMYM3	1	1
RAB42	ZNF362	1	1
RAB42	16p-Amp	1	1
RAB42	17q-Amp	1	1
RAB42	20p-Amp	1	1
RAB42	20q-Amp	1	1
RAB42	5p-Amp	1	1
RAB42	7p-Amp	1	1
RAB42	8p-Amp	1	1
RAB42	11p-Del	1	1
RAB42	14q-Del	1	1
RAB42	15q-Del	1	1
RAB42	16p-Del	1	1
RAB42	17p-Del	1	1
RAB42	17q-Del	1	1
RAB42	18p-Del	1	1
RAB42	18q-Del	1	1
RAB42	1p-Del	1	1
RAB42	1q-Del	1	1
RAB42	22q-Del	1	1
RAB42	4p-Del	1	1
RAB42	4q-Del	1	1
RAB42	5q-Del	1	1
RAB42	6q-Del	1	1
RAB42	8p-Del	1	1
RAB42	9p-Del	1	1
RAB42	9q-Del	1	1
RAB42	Amp_3p25.1	1	1
RAB42	Amp_4q13.3	1	1
RAB42	Amp_6p23	1	1
RAB42	Amp_6q21	1	1
RAB42	Amp_10q22.3	1	1
RAB42	Amp_11p13	1	1
RAB42	Amp_11q13.3	1	1
RAB42	Amp_11q14.1	1	1
RAB42	Amp_12p13.33	1	1
RAB42	Amp_13q34	1	1
RAB42	Amp_14q21.1	1	1
RAB42	Amp_15q26.3	1	1
RAB42	Amp_17q12	1	1
RAB42	Amp_17q23.1	1	1
RAB42	Amp_19p13.12	1	1
RAB42	Amp_19q13.42	1	1
RAB42	Amp_20q13.2	1	1
RAB42	Del_1p36.13	1	1
RAB42	Del_2q37.3	1	1
RAB42	Del_3p21.31	1	1
RAB42	Del_4p16.3	1	1
RAB42	Del_4q35.1	1	1
RAB42	Del_5q11.2	1	1
RAB42	Del_5q21.3	1	1
RAB42	Del_6p25.3	1	1
RAB42	Del_6q15	1	1
RAB42	Del_6q27	1	1
RAB42	Del_7p22.3	1	1
RAB42	Del_8p23.2	1	1
RAB42	Del_9p23	1	1
RAB42	Del_9p21.3	1	1
RAB42	Del_9q21.11	1	1
RAB42	Del_9q34.2	1	1
RAB42	Del_10q23.31	1	1
RAB42	Del_10q26.3	1	1
RAB42	Del_11p15.5	1	1
RAB42	Del_11q13.1	1	1
RAB42	Del_12p13.1	1	1
RAB42	Del_12q23.1	1	1
RAB42	Del_12q24.31	1	1
RAB42	Del_14q24.1	1	1
RAB42	Del_15q13.1	1	1
RAB42	Del_17q21.31	1	1
RAB42	Del_18q23	1	1
RAB42	Del_19p13.3	1	1
RAB42	Del_19q13.32	1	1
RAB42	Del_20p13	1	1
RAB42	Del_21q11.2	1	1
RAB42	Del_22q13.32	1	1
RB1	SF3B1	1	1
RB1	SMAD4	1	1
RB1	SP3	1	1
RB1	TBL1XR1	1	1
RB1	TCP11	1	1
RB1	TFE3	1	1
RB1	TGS1	1	1
RB1	USP36	1	1
RB1	VCPIP1	1	1
RB1	ZBTB7C	1	1
RB1	ZFP36L1	1	1
RB1	ZNF362	1	1
RB1	17q-Amp	1	1
RB1	7p-Amp	1	1
RB1	7q-Amp	1	1
RB1	Amp_3p25.1	1	1
RB1	Amp_4q13.3	1	1
RB1	Amp_12q15	1	1
RB1	Amp_19p13.12	1	1
RB1	Del_11q13.1	1	1
RBMX	RUNX1	1	1
RBMX	SF3B1	1	1
RBMX	SMAD4	1	1
RBMX	SP3	1	1
RBMX	TBL1XR1	1	1
RBMX	TCP11	1	1
RBMX	TFE3	1	1
RBMX	TGS1	1	1
RBMX	USP36	1	1
RBMX	VCPIP1	1	1
RBMX	ZBTB7C	1	1
RBMX	ZFP36L1	1	1
RBMX	ZFP36L2	1	1
RBMX	ZNF362	1	1
RBMX	11q-Del	1	1
RBMX	14q-Del	1	1
RBMX	17q-Del	1	1
RBMX	18p-Del	1	1
RBMX	18q-Del	1	1
RBMX	22q-Del	1	1
RBMX	6q-Del	1	1
RBMX	Amp_3p25.1	1	1
RBMX	Amp_4q13.3	1	1
RBMX	Amp_6p23	1	1
RBMX	Amp_10q22.3	1	1
RBMX	Amp_12q15	1	1
RBMX	Amp_13q34	1	1
RBMX	Amp_19p13.12	1	1
RBMX	Amp_19q13.42	1	1
RBMX	Del_6p25.3	1	1
RBMX	Del_6q15	1	1
RBMX	Del_6q27	1	1
RBMX	Del_7p22.3	1	1
RBMX	Del_7q36.1	1	1
RBMX	Del_9p23	1	1
RBMX	Del_12q23.1	1	1
RBMX	Del_14q24.1	1	1
RBMX	Del_17q21.31	1	1
RBMX	Del_19q13.32	1	1
RBMX	Del_20p13	1	1
RUFY1	SF3B1	1	1
RUFY1	SP3	1	1
RUFY1	TBL1XR1	1	1
RUFY1	TFE3	1	1
RUFY1	USP36	1	1
RUFY1	ZFP36L1	1	1
RUFY1	ZNF362	1	1
RUFY1	16p-Amp	1	1
RUFY1	17q-Amp	1	1
RUFY1	5p-Amp	1	1
RUFY1	7p-Amp	1	1
RUFY1	7q-Amp	1	1
RUFY1	13q-Del	1	1
RUFY1	15q-Del	1	1
RUFY1	17q-Del	1	1
RUFY1	1q-Del	1	1
RUFY1	6q-Del	1	1
RUFY1	Amp_1p22.3	1	1
RUFY1	Amp_3p25.1	1	1
RUFY1	Amp_4q13.3	1	1
RUFY1	Amp_6q21	1	1
RUFY1	Amp_11p13	1	1
RUFY1	Amp_11q13.3	1	1
RUFY1	Amp_12q15	1	1
RUFY1	Amp_13q34	1	1
RUFY1	Amp_14q21.1	1	1
RUFY1	Amp_17q12	1	1
RUFY1	Amp_17q23.1	1	1
RUFY1	Amp_19p13.12	1	1
RUFY1	Amp_19q12	1	1
RUFY1	Amp_19q13.42	1	1
RUFY1	Del_6p25.3	1	1
RUFY1	Del_6q15	1	1
RUFY1	Del_6q27	1	1
RUFY1	Del_12p13.1	1	1
RUFY1	Del_12q23.1	1	1
RUFY1	Del_19q13.32	1	1
RUFY1	Del_21q11.2	1	1
RUNX1	SP3	1	1
RUNX1	TBX3	1	1
RUNX1	TFE3	1	1
RUNX1	USP36	1	1
RUNX1	ZBTB7C	1	1
RUNX1	ZFP36L1	1	1
RUNX1	ZFP36L2	1	1
RUNX1	ZNF362	1	1
RUNX1	17q-Amp	1	1
RUNX1	5p-Amp	1	1
RUNX1	7p-Amp	1	1
RUNX1	7q-Amp	1	1
RUNX1	15q-Del	1	1
RUNX1	17q-Del	1	1
RUNX1	1q-Del	1	1
RUNX1	Amp_6q21	1	1
RUNX1	Amp_11p13	1	1
RUNX1	Amp_19p13.12	1	1
RUNX1	Amp_19q13.42	1	1
RUNX1	Del_9q21.11	1	1
SF3B1	SMAD2	1	1
SF3B1	TAF1L	1	1
SF3B1	TBL1XR1	1	1
SF3B1	TBX3	1	1
SF3B1	TCP11	1	1
SF3B1	TFE3	1	1
SF3B1	TPP2	1	1
SF3B1	USP36	1	1
SF3B1	VCPIP1	1	1
SF3B1	ZBTB7C	1	1
SF3B1	ZFP36L1	1	1
SF3B1	ZFP36L2	1	1
SF3B1	ZMYM3	1	1
SF3B1	ZNF362	1	1
SF3B1	8p-Amp	1	1
SF3B1	17q-Del	1	1
SF3B1	1p-Del	1	1
SF3B1	1q-Del	1	1
SF3B1	4p-Del	1	1
SF3B1	4q-Del	1	1
SF3B1	5q-Del	1	1
SF3B1	6q-Del	1	1
SF3B1	9q-Del	1	1
SF3B1	Amp_4q13.3	1	1
SF3B1	Amp_6q21	1	1
SF3B1	Amp_10p15.1	1	1
SF3B1	Amp_10q22.3	1	1
SF3B1	Amp_14q21.1	1	1
SF3B1	Amp_15q26.3	1	1
SF3B1	Amp_19p13.12	1	1
SF3B1	Amp_19q12	1	1
SF3B1	Del_1p36.13	1	1
SF3B1	Del_2q37.3	1	1
SF3B1	Del_6p25.3	1	1
SF3B1	Del_7p22.3	1	1
SF3B1	Del_9q21.11	1	1
SF3B1	Del_9q34.2	1	1
SF3B1	Del_19q13.32	1	1
SF3B1	Del_21q11.2	1	1
SMAD2	SMAD4	1	1
SMAD2	SP3	1	1
SMAD2	TBL1XR1	1	1
SMAD2	TCP11	1	1
SMAD2	TGS1	1	1
SMAD2	USP36	1	1
SMAD2	ZBTB7C	1	1
SMAD2	ZFP36L1	1	1
SMAD2	ZFP36L2	1	1
SMAD2	ZNF362	1	1
SMAD2	17q-Amp	1	1
SMAD2	20p-Amp	1	1
SMAD2	20q-Amp	1	1
SMAD2	5p-Amp	1	1
SMAD2	7p-Amp	1	1
SMAD2	7q-Amp	1	1
SMAD2	8p-Amp	1	1
SMAD2	8q-Amp	1	1
SMAD2	14q-Del	1	1
SMAD2	1q-Del	1	1
SMAD2	5q-Del	1	1
SMAD2	6q-Del	1	1
SMAD2	9q-Del	1	1
SMAD2	Amp_3p25.1	1	1
SMAD2	Amp_3q26.32	1	1
SMAD2	Amp_4q13.3	1	1
SMAD2	Amp_6p23	1	1
SMAD2	Amp_6q21	1	1
SMAD2	Amp_8p11.23	1	1
SMAD2	Amp_8p11.21	1	1
SMAD2	Amp_10p15.1	1	1
SMAD2	Amp_10q22.3	1	1
SMAD2	Amp_12p13.33	1	1
SMAD2	Amp_12q15	1	1
SMAD2	Amp_13q34	1	1
SMAD2	Amp_14q21.1	1	1
SMAD2	Amp_19p13.12	1	1
SMAD2	Amp_19q12	1	1
SMAD2	Amp_19q13.42	1	1
SMAD2	Amp_20q13.2	1	1
SMAD2	Del_2q37.3	1	1
SMAD2	Del_4p16.3	1	1
SMAD2	Del_4q35.1	1	1
SMAD2	Del_5q11.2	1	1
SMAD2	Del_5q21.3	1	1
SMAD2	Del_6p25.3	1	1
SMAD2	Del_6q15	1	1
SMAD2	Del_6q27	1	1
SMAD2	Del_7q36.1	1	1
SMAD2	Del_9q21.11	1	1
SMAD2	Del_9q34.2	1	1
SMAD2	Del_12p13.1	1	1
SMAD2	Del_12q23.1	1	1
SMAD2	Del_12q24.31	1	1
SMAD2	Del_14q24.1	1	1
SMAD2	Del_19q13.32	1	1
SMAD4	TAF1L	1	1
SMAD4	TBL1XR1	1	1
SMAD4	TBX3	1	1
SMAD4	TFE3	1	1
SMAD4	TPP2	1	1
SMAD4	USP36	1	1
SMAD4	ZBTB7C	1	1
SMAD4	ZFP36L1	1	1
SMAD4	ZFP36L2	1	1
SMAD4	ZMYM3	1	1
SMAD4	ZNF362	1	1
SMAD4	16p-Amp	1	1
SMAD4	7q-Amp	1	1
SMAD4	11p-Del	1	1
SMAD4	14q-Del	1	1
SMAD4	15q-Del	1	1
SMAD4	16p-Del	1	1
SMAD4	1p-Del	1	1
SMAD4	1q-Del	1	1
SMAD4	5q-Del	1	1
SMAD4	9p-Del	1	1
SMAD4	9q-Del	1	1
SMAD4	Amp_3p25.1	1	1
SMAD4	Amp_6p23	1	1
SMAD4	Amp_6q21	1	1
SMAD4	Amp_10q22.3	1	1
SMAD4	Amp_11p13	1	1
SMAD4	Amp_11q14.1	1	1
SMAD4	Amp_12p13.33	1	1
SMAD4	Amp_13q34	1	1
SMAD4	Amp_19p13.12	1	1
SMAD4	Amp_19q12	1	1
SMAD4	Amp_19q13.42	1	1
SMAD4	Del_1p22.1	1	1
SMAD4	Del_6p25.3	1	1
SMAD4	Del_7p22.3	1	1
SMAD4	Del_9q21.11	1	1
SMAD4	Del_9q34.2	1	1
SMAD4	Del_10q23.31	1	1
SMAD4	Del_11p15.5	1	1
SMAD4	Del_11q13.1	1	1
SMAD4	Del_12q23.1	1	1
SMAD4	Del_14q24.1	1	1
SMAD4	Del_19q13.32	1	1
SP3	TAF1L	1	1
SP3	TBX3	1	1
SP3	TCP11	1	1
SP3	TFE3	1	1
SP3	TPP2	1	1
SP3	USP36	1	1
SP3	VCPIP1	1	1
SP3	ZBTB7C	1	1
SP3	ZFP36L1	1	1
SP3	ZFP36L2	1	1
SP3	ZMYM3	1	1
SP3	ZNF362	1	1
SP3	5p-Amp	1	1
SP3	7p-Amp	1	1
SP3	7q-Amp	1	1
SP3	8p-Amp	1	1
SP3	8q-Amp	1	1
SP3	11p-Del	1	1
SP3	11q-Del	1	1
SP3	15q-Del	1	1
SP3	16p-Del	1	1
SP3	17q-Del	1	1
SP3	18p-Del	1	1
SP3	18q-Del	1	1
SP3	1p-Del	1	1
SP3	1q-Del	1	1
SP3	5q-Del	1	1
SP3	9p-Del	1	1
SP3	9q-Del	1	1
SP3	Amp_1p22.3	1	1
SP3	Amp_3q26.32	1	1
SP3	Amp_4q13.3	1	1
SP3	Amp_6p23	1	1
SP3	Amp_6q21	1	1
SP3	Amp_8p11.23	1	1
SP3	Amp_8p11.21	1	1
SP3	Amp_10p15.1	1	1
SP3	Amp_10q22.3	1	1
SP3	Amp_11p13	1	1
SP3	Amp_12p13.33	1	1
SP3	Amp_12q15	1	1
SP3	Amp_13q34	1	1
SP3	Amp_14q21.1	1	1
SP3	Amp_15q26.3	1	1
SP3	Amp_19p13.12	1	1
SP3	Amp_19q12	1	1
SP3	Del_2q37.3	1	1
SP3	Del_3p21.31	1	1
SP3	Del_4p16.3	1	1
SP3	Del_4q35.1	1	1
SP3	Del_5q11.2	1	1
SP3	Del_5q21.3	1	1
SP3	Del_6p25.3	1	1
SP3	Del_7q36.1	1	1
SP3	Del_9p23	1	1
SP3	Del_9p21.3	1	1
SP3	Del_9q34.2	1	1
SP3	Del_11q13.1	1	1
SP3	Del_12q23.1	1	1
SP3	Del_12q24.31	1	1
SP3	Del_15q13.1	1	1
SP3	Del_18q23	1	1
SP3	Del_19q13.32	1	1
SP3	Del_20p13	1	1
SP3	Del_21q11.2	1	1
SPEN	ZFP36L1	1	1
SPEN	ZNF362	1	1
SPEN	15q-Del	1	1
SPEN	17q-Del	1	1
SPEN	4q-Del	1	1
SPEN	Amp_3p25.1	1	1
SPEN	Amp_10q22.3	1	1
SPEN	Amp_19p13.12	1	1
SPEN	Del_2q37.3	1	1
SPEN	Del_7p22.3	1	1
SPEN	Del_19q13.32	1	1
SPEN	Del_20p13	1	1
TAF1L	TBL1XR1	1	1
TAF1L	TCP11	1	1
TAF1L	ZFP36L1	1	1
TAF1L	ZNF362	1	1
TAF1L	16p-Amp	1	1
TAF1L	7q-Amp	1	1
TAF1L	1q-Del	1	1
TAF1L	Amp_1p22.3	1	1
TAF1L	Amp_3p25.1	1	1
TAF1L	Amp_6p23	1	1
TAF1L	Amp_12p13.33	1	1
TAF1L	Amp_12q15	1	1
TAF1L	Amp_13q34	1	1
TAF1L	Amp_15q26.3	1	1
TAF1L	Del_12q23.1	1	1
TAF1L	Del_12q24.31	1	1
TAF1L	Del_21q11.2	1	1
TBL1XR1	TBX3	1	1
TBL1XR1	TCP11	1	1
TBL1XR1	TFE3	1	1
TBL1XR1	TGS1	1	1
TBL1XR1	TP53	1	1
TBL1XR1	TPP2	1	1
TBL1XR1	USP36	1	1
TBL1XR1	VCPIP1	1	1
TBL1XR1	ZBTB7C	1	1
TBL1XR1	ZFP36L1	1	1
TBL1XR1	ZFP36L2	1	1
TBL1XR1	ZMYM3	1	1
TBL1XR1	ZNF362	1	1
TBL1XR1	17q-Amp	1	1
TBL1XR1	20p-Amp	1	1
TBL1XR1	20q-Amp	1	1
TBL1XR1	5p-Amp	1	1
TBL1XR1	7p-Amp	1	1
TBL1XR1	7q-Amp	1	1
TBL1XR1	8p-Amp	1	1
TBL1XR1	8q-Amp	1	1
TBL1XR1	15q-Del	1	1
TBL1XR1	16p-Del	1	1
TBL1XR1	17p-Del	1	1
TBL1XR1	17q-Del	1	1
TBL1XR1	18p-Del	1	1
TBL1XR1	18q-Del	1	1
TBL1XR1	1p-Del	1	1
TBL1XR1	1q-Del	1	1
TBL1XR1	5q-Del	1	1
TBL1XR1	8p-Del	1	1
TBL1XR1	9p-Del	1	1
TBL1XR1	9q-Del	1	1
TBL1XR1	Amp_3p25.1	1	1
TBL1XR1	Amp_3q26.32	1	1
TBL1XR1	Amp_4q13.3	1	1
TBL1XR1	Amp_6p23	1	1
TBL1XR1	Amp_6q21	1	1
TBL1XR1	Amp_10p15.1	1	1
TBL1XR1	Amp_10q22.3	1	1
TBL1XR1	Amp_11p13	1	1
TBL1XR1	Amp_12p13.33	1	1
TBL1XR1	Amp_12q15	1	1
TBL1XR1	Amp_13q34	1	1
TBL1XR1	Amp_14q21.1	1	1
TBL1XR1	Amp_15q26.3	1	1
TBL1XR1	Amp_19p13.12	1	1
TBL1XR1	Amp_19q12	1	1
TBL1XR1	Amp_19q13.42	1	1
TBL1XR1	Amp_20q13.2	1	1
TBL1XR1	Del_2q37.3	1	1
TBL1XR1	Del_5q11.2	1	1
TBL1XR1	Del_5q21.3	1	1
TBL1XR1	Del_7p22.3	1	1
TBL1XR1	Del_9p23	1	1
TBL1XR1	Del_9q21.11	1	1
TBL1XR1	Del_9q34.2	1	1
TBL1XR1	Del_11p15.5	1	1
TBL1XR1	Del_12q23.1	1	1
TBL1XR1	Del_12q24.31	1	1
TBL1XR1	Del_15q13.1	1	1
TBL1XR1	Del_17p12	1	1
TBL1XR1	Del_18q23	1	1
TBL1XR1	Del_19q13.32	1	1
TBL1XR1	Del_21q11.2	1	1
TBX3	TCP11	1	1
TBX3	USP36	1	1
TBX3	ZBTB7C	1	1
TBX3	ZFP36L2	1	1
TBX3	ZNF362	1	1
TBX3	20p-Amp	1	1
TBX3	7p-Amp	1	1
TBX3	7q-Amp	1	1
TBX3	14q-Del	1	1
TBX3	18p-Del	1	1
TBX3	1p-Del	1	1
TBX3	1q-Del	1	1
TBX3	4p-Del	1	1
TBX3	4q-Del	1	1
TBX3	5q-Del	1	1
TBX3	Amp_3q26.32	1	1
TBX3	Amp_10q22.3	1	1
TBX3	Amp_11p13	1	1
TBX3	Amp_12p13.33	1	1
TBX3	Amp_15q26.3	1	1
TBX3	Amp_19p13.12	1	1
TBX3	Del_1p36.13	1	1
TBX3	Del_2q37.3	1	1
TBX3	Del_4p16.3	1	1
TBX3	Del_4q35.1	1	1
TBX3	Del_5q21.3	1	1
TBX3	Del_7p22.3	1	1
TBX3	Del_12q23.1	1	1
TBX3	Del_12q24.31	1	1
TBX3	Del_14q24.1	1	1
TBX3	Del_19q13.32	1	1
TCP11	TFE3	1	1
TCP11	TPP2	1	1
TCP11	USP36	1	1
TCP11	ZBTB7C	1	1
TCP11	ZFP36L1	1	1
TCP11	ZFP36L2	1	1
TCP11	ZMYM3	1	1
TCP11	ZNF362	1	1
TCP11	16p-Amp	1	1
TCP11	17q-Amp	1	1
TCP11	7p-Amp	1	1
TCP11	7q-Amp	1	1
TCP11	8p-Amp	1	1
TCP11	11p-Del	1	1
TCP11	11q-Del	1	1
TCP11	13q-Del	1	1
TCP11	14q-Del	1	1
TCP11	15q-Del	1	1
TCP11	16p-Del	1	1
TCP11	17p-Del	1	1
TCP11	17q-Del	1	1
TCP11	1p-Del	1	1
TCP11	1q-Del	1	1
TCP11	22q-Del	1	1
TCP11	5q-Del	1	1
TCP11	9p-Del	1	1
TCP11	9q-Del	1	1
TCP11	Amp_4q13.3	1	1
TCP11	Amp_6q21	1	1
TCP11	Amp_10q22.3	1	1
TCP11	Amp_11p13	1	1
TCP11	Amp_11q14.1	1	1
TCP11	Amp_12p13.33	1	1
TCP11	Amp_13q34	1	1
TCP11	Amp_15q26.3	1	1
TCP11	Amp_17q12	1	1
TCP11	Amp_19p13.12	1	1
TCP11	Amp_19q12	1	1
TCP11	Amp_19q13.42	1	1
TCP11	Del_1p36.13	1	1
TCP11	Del_1p22.1	1	1
TCP11	Del_2q37.3	1	1
TCP11	Del_4p16.3	1	1
TCP11	Del_4q35.1	1	1
TCP11	Del_5q11.2	1	1
TCP11	Del_5q21.3	1	1
TCP11	Del_6q15	1	1
TCP11	Del_7p22.3	1	1
TCP11	Del_7q36.1	1	1
TCP11	Del_9p23	1	1
TCP11	Del_9q21.11	1	1
TCP11	Del_9q34.2	1	1
TCP11	Del_10q23.31	1	1
TCP11	Del_10q26.3	1	1
TCP11	Del_11p15.5	1	1
TCP11	Del_11q13.1	1	1
TCP11	Del_11q23.3	1	1
TCP11	Del_11q25	1	1
TCP11	Del_12p13.1	1	1
TCP11	Del_12q23.1	1	1
TCP11	Del_13q14.2	1	1
TCP11	Del_14q24.1	1	1
TCP11	Del_17p12	1	1
TCP11	Del_17q21.31	1	1
TCP11	Del_19p13.3	1	1
TCP11	Del_19q13.32	1	1
TCP11	Del_20p13	1	1
TCP11	Del_22q13.32	1	1
TFE3	TPP2	1	1
TFE3	USP36	1	1
TFE3	VCPIP1	1	1
TFE3	ZBTB7C	1	1
TFE3	ZFP36L1	1	1
TFE3	ZFP36L2	1	1
TFE3	16p-Amp	1	1
TFE3	20p-Amp	1	1
TFE3	20q-Amp	1	1
TFE3	5p-Amp	1	1
TFE3	7p-Amp	1	1
TFE3	7q-Amp	1	1
TFE3	8p-Amp	1	1
TFE3	11p-Del	1	1
TFE3	11q-Del	1	1
TFE3	13q-Del	1	1
TFE3	14q-Del	1	1
TFE3	15q-Del	1	1
TFE3	16p-Del	1	1
TFE3	16q-Del	1	1
TFE3	18p-Del	1	1
TFE3	18q-Del	1	1
TFE3	1p-Del	1	1
TFE3	1q-Del	1	1
TFE3	Amp_3p25.1	1	1
TFE3	Amp_3q26.32	1	1
TFE3	Amp_4q13.3	1	1
TFE3	Amp_6p23	1	1
TFE3	Amp_10q22.3	1	1
TFE3	Amp_12p13.33	1	1
TFE3	Amp_12q15	1	1
TFE3	Amp_14q21.1	1	1
TFE3	Amp_15q26.3	1	1
TFE3	Amp_19q12	1	1
TFE3	Del_1p22.1	1	1
TFE3	Del_5q11.2	1	1
TFE3	Del_6p25.3	1	1
TFE3	Del_7p22.3	1	1
TFE3	Del_11p15.5	1	1
TFE3	Del_11q13.1	1	1
TFE3	Del_11q23.3	1	1
TFE3	Del_11q25	1	1
TFE3	Del_13q14.2	1	1
TFE3	Del_14q24.1	1	1
TFE3	Del_15q13.1	1	1
TFE3	Del_18q23	1	1
TFE3	Del_19p13.3	1	1
TGS1	TPP2	1	1
TGS1	USP36	1	1
TGS1	ZBTB7C	1	1
TGS1	ZFP36L1	1	1
TGS1	ZFP36L2	1	1
TGS1	ZMYM3	1	1
TGS1	ZNF362	1	1
TGS1	16p-Amp	1	1
TGS1	5p-Amp	1	1
TGS1	7p-Amp	1	1
TGS1	7q-Amp	1	1
TGS1	11p-Del	1	1
TGS1	11q-Del	1	1
TGS1	15q-Del	1	1
TGS1	16p-Del	1	1
TGS1	1p-Del	1	1
TGS1	1q-Del	1	1
TGS1	4p-Del	1	1
TGS1	5q-Del	1	1
TGS1	Amp_3q26.32	1	1
TGS1	Amp_4q13.3	1	1
TGS1	Amp_6p23	1	1
TGS1	Amp_10p15.1	1	1
TGS1	Amp_11p13	1	1
TGS1	Amp_11q14.1	1	1
TGS1	Amp_12p13.33	1	1
TGS1	Amp_13q34	1	1
TGS1	Amp_14q21.1	1	1
TGS1	Amp_15q26.3	1	1
TGS1	Amp_19p13.12	1	1
TGS1	Amp_19q12	1	1
TGS1	Amp_19q13.42	1	1
TGS1	Del_1p36.13	1	1
TGS1	Del_2q37.3	1	1
TGS1	Del_4p16.3	1	1
TGS1	Del_5q11.2	1	1
TGS1	Del_7q36.1	1	1
TGS1	Del_11q13.1	1	1
TGS1	Del_12q23.1	1	1
TGS1	Del_15q13.1	1	1
TGS1	Del_19p13.3	1	1
TGS1	Del_19q13.32	1	1
TP53	1q-Amp	1	1
TP53	11q-Del	1	1
TP53	16q-Del	1	1
TP53	22q-Del	1	1
TP53	Del_1p22.1	1	1
TP53	Del_6q15	1	1
TP53	Del_11q23.3	1	1
TP53	Del_16q24.3	1	1
TPP2	USP36	1	1
TPP2	ZBTB7C	1	1
TPP2	ZFP36L1	1	1
TPP2	ZFP36L2	1	1
TPP2	ZNF362	1	1
TPP2	7p-Amp	1	1
TPP2	7q-Amp	1	1
TPP2	14q-Del	1	1
TPP2	15q-Del	1	1
TPP2	17q-Del	1	1
TPP2	18p-Del	1	1
TPP2	18q-Del	1	1
TPP2	1q-Del	1	1
TPP2	22q-Del	1	1
TPP2	4p-Del	1	1
TPP2	4q-Del	1	1
TPP2	6q-Del	1	1
TPP2	Amp_3p25.1	1	1
TPP2	Amp_3q26.32	1	1
TPP2	Amp_6p23	1	1
TPP2	Amp_6q21	1	1
TPP2	Amp_11p13	1	1
TPP2	Amp_12p13.33	1	1
TPP2	Amp_14q21.1	1	1
TPP2	Amp_15q26.3	1	1
TPP2	Del_1p36.13	1	1
TPP2	Del_3p21.31	1	1
TPP2	Del_4p16.3	1	1
TPP2	Del_6p25.3	1	1
TPP2	Del_6q27	1	1
TPP2	Del_10q23.31	1	1
TPP2	Del_10q26.3	1	1
TPP2	Del_12p13.1	1	1
TPP2	Del_12q24.31	1	1
TPP2	Del_14q24.1	1	1
TPP2	Del_18q23	1	1
TPP2	Del_19p13.3	1	1
TPP2	Del_20p13	1	1
TPP2	Del_21q11.2	1	1
TPP2	Del_22q13.32	1	1
USP36	VCPIP1	1	1
USP36	ZBTB7C	1	1
USP36	ZFP36L1	1	1
USP36	ZFP36L2	1	1
USP36	ZNF362	1	1
USP36	7p-Amp	1	1
USP36	7q-Amp	1	1
USP36	8p-Amp	1	1
USP36	15q-Del	1	1
USP36	16p-Del	1	1
USP36	18p-Del	1	1
USP36	18q-Del	1	1
USP36	1p-Del	1	1
USP36	1q-Del	1	1
USP36	4p-Del	1	1
USP36	4q-Del	1	1
USP36	6q-Del	1	1
USP36	9p-Del	1	1
USP36	Amp_3p25.1	1	1
USP36	Amp_10q22.3	1	1
USP36	Del_1p36.13	1	1
USP36	Del_1p22.1	1	1
USP36	Del_2q37.3	1	1
USP36	Del_4p16.3	1	1
USP36	Del_6q15	1	1
USP36	Del_7p22.3	1	1
USP36	Del_7q36.1	1	1
USP36	Del_9p23	1	1
USP36	Del_9p21.3	1	1
USP36	Del_11p15.5	1	1
USP36	Del_12q23.1	1	1
USP36	Del_12q24.31	1	1
USP36	Del_15q13.1	1	1
USP36	Del_19q13.32	1	1
VCPIP1	ZFP36L1	1	1
VCPIP1	ZMYM3	1	1
VCPIP1	ZNF362	1	1
VCPIP1	7p-Amp	1	1
VCPIP1	7q-Amp	1	1
VCPIP1	8p-Amp	1	1
VCPIP1	11p-Del	1	1
VCPIP1	11q-Del	1	1
VCPIP1	14q-Del	1	1
VCPIP1	15q-Del	1	1
VCPIP1	16p-Del	1	1
VCPIP1	1q-Del	1	1
VCPIP1	4p-Del	1	1
VCPIP1	4q-Del	1	1
VCPIP1	5q-Del	1	1
VCPIP1	9p-Del	1	1
VCPIP1	9q-Del	1	1
VCPIP1	Amp_1p22.3	1	1
VCPIP1	Amp_3p25.1	1	1
VCPIP1	Amp_6p23	1	1
VCPIP1	Amp_11p13	1	1
VCPIP1	Amp_13q34	1	1
VCPIP1	Amp_14q21.1	1	1
VCPIP1	Amp_15q26.3	1	1
VCPIP1	Del_4p16.3	1	1
VCPIP1	Del_5q11.2	1	1
VCPIP1	Del_5q21.3	1	1
VCPIP1	Del_6p25.3	1	1
VCPIP1	Del_7q36.1	1	1
VCPIP1	Del_12q23.1	1	1
VCPIP1	Del_15q13.1	1	1
VCPIP1	Del_19q13.32	1	1
VCPIP1	Del_20p13	1	1
VCPIP1	Del_21q11.2	1	1
ZBTB7C	ZFP36L1	1	1
ZBTB7C	ZMYM3	1	1
ZBTB7C	ZNF362	1	1
ZBTB7C	17q-Amp	1	1
ZBTB7C	5p-Amp	1	1
ZBTB7C	7p-Amp	1	1
ZBTB7C	7q-Amp	1	1
ZBTB7C	8p-Amp	1	1
ZBTB7C	8q-Amp	1	1
ZBTB7C	11p-Del	1	1
ZBTB7C	13q-Del	1	1
ZBTB7C	14q-Del	1	1
ZBTB7C	15q-Del	1	1
ZBTB7C	16p-Del	1	1
ZBTB7C	17q-Del	1	1
ZBTB7C	1p-Del	1	1
ZBTB7C	1q-Del	1	1
ZBTB7C	22q-Del	1	1
ZBTB7C	4p-Del	1	1
ZBTB7C	4q-Del	1	1
ZBTB7C	5q-Del	1	1
ZBTB7C	6q-Del	1	1
ZBTB7C	8p-Del	1	1
ZBTB7C	9p-Del	1	1
ZBTB7C	9q-Del	1	1
ZBTB7C	Amp_3p25.1	1	1
ZBTB7C	Amp_3q26.32	1	1
ZBTB7C	Amp_4q13.3	1	1
ZBTB7C	Amp_6p23	1	1
ZBTB7C	Amp_6q21	1	1
ZBTB7C	Amp_8p11.23	1	1
ZBTB7C	Amp_8p11.21	1	1
ZBTB7C	Amp_8q24.21	1	1
ZBTB7C	Amp_10p15.1	1	1
ZBTB7C	Amp_10q22.3	1	1
ZBTB7C	Amp_11q14.1	1	1
ZBTB7C	Amp_12p13.33	1	1
ZBTB7C	Amp_12q15	1	1
ZBTB7C	Amp_13q34	1	1
ZBTB7C	Amp_14q21.1	1	1
ZBTB7C	Amp_15q26.3	1	1
ZBTB7C	Amp_17q12	1	1
ZBTB7C	Amp_19p13.12	1	1
ZBTB7C	Amp_19q12	1	1
ZBTB7C	Amp_19q13.42	1	1
ZBTB7C	Del_1p36.13	1	1
ZBTB7C	Del_1p22.1	1	1
ZBTB7C	Del_2q37.3	1	1
ZBTB7C	Del_3p21.31	1	1
ZBTB7C	Del_4p16.3	1	1
ZBTB7C	Del_4q35.1	1	1
ZBTB7C	Del_5q11.2	1	1
ZBTB7C	Del_5q21.3	1	1
ZBTB7C	Del_6p25.3	1	1
ZBTB7C	Del_7p22.3	1	1
ZBTB7C	Del_7q36.1	1	1
ZBTB7C	Del_8p23.2	1	1
ZBTB7C	Del_9p23	1	1
ZBTB7C	Del_9p21.3	1	1
ZBTB7C	Del_9q21.11	1	1
ZBTB7C	Del_9q34.2	1	1
ZBTB7C	Del_12p13.1	1	1
ZBTB7C	Del_12q23.1	1	1
ZBTB7C	Del_12q24.31	1	1
ZBTB7C	Del_13q14.2	1	1
ZBTB7C	Del_14q24.1	1	1
ZBTB7C	Del_19p13.3	1	1
ZBTB7C	Del_19q13.32	1	1
ZBTB7C	Del_21q11.2	1	1
ZBTB7C	Del_22q13.32	1	1
ZFP36L1	ZFP36L2	1	1
ZFP36L1	ZMYM3	1	1
ZFP36L1	ZNF362	1	1
ZFP36L1	17q-Amp	1	1
ZFP36L1	20p-Amp	1	1
ZFP36L1	7p-Amp	1	1
ZFP36L1	7q-Amp	1	1
ZFP36L1	11p-Del	1	1
ZFP36L1	16p-Del	1	1
ZFP36L1	1q-Del	1	1
ZFP36L1	4q-Del	1	1
ZFP36L1	5q-Del	1	1
ZFP36L1	Amp_3q26.32	1	1
ZFP36L1	Amp_6p23	1	1
ZFP36L1	Amp_10q22.3	1	1
ZFP36L1	Amp_11p13	1	1
ZFP36L1	Amp_12p13.33	1	1
ZFP36L1	Amp_13q34	1	1
ZFP36L1	Amp_14q21.1	1	1
ZFP36L1	Amp_15q26.3	1	1
ZFP36L1	Amp_17q12	1	1
ZFP36L1	Amp_19p13.12	1	1
ZFP36L1	Amp_19q12	1	1
ZFP36L1	Del_4q35.1	1	1
ZFP36L1	Del_7p22.3	1	1
ZFP36L1	Del_7q36.1	1	1
ZFP36L1	Del_11p15.5	1	1
ZFP36L1	Del_12p13.1	1	1
ZFP36L1	Del_12q23.1	1	1
ZFP36L1	Del_12q24.31	1	1
ZFP36L1	Del_19q13.32	1	1
ZFP36L1	Del_21q11.2	1	1
ZFP36L2	ZMYM3	1	1
ZFP36L2	ZNF362	1	1
ZFP36L2	1q-Amp	1	1
ZFP36L2	20p-Amp	1	1
ZFP36L2	20q-Amp	1	1
ZFP36L2	5p-Amp	1	1
ZFP36L2	7p-Amp	1	1
ZFP36L2	7q-Amp	1	1
ZFP36L2	8p-Amp	1	1
ZFP36L2	11p-Del	1	1
ZFP36L2	11q-Del	1	1
ZFP36L2	14q-Del	1	1
ZFP36L2	15q-Del	1	1
ZFP36L2	17q-Del	1	1
ZFP36L2	18p-Del	1	1
ZFP36L2	18q-Del	1	1
ZFP36L2	1p-Del	1	1
ZFP36L2	1q-Del	1	1
ZFP36L2	4p-Del	1	1
ZFP36L2	4q-Del	1	1
ZFP36L2	9q-Del	1	1
ZFP36L2	Amp_3p25.1	1	1
ZFP36L2	Amp_3q26.32	1	1
ZFP36L2	Amp_4q13.3	1	1
ZFP36L2	Amp_6q21	1	1
ZFP36L2	Amp_11p13	1	1
ZFP36L2	Amp_11q13.3	1	1
ZFP36L2	Amp_11q14.1	1	1
ZFP36L2	Amp_12p13.33	1	1
ZFP36L2	Amp_14q21.1	1	1
ZFP36L2	Amp_15q26.3	1	1
ZFP36L2	Amp_19p13.12	1	1
ZFP36L2	Amp_19q12	1	1
ZFP36L2	Del_1p36.13	1	1
ZFP36L2	Del_1p22.1	1	1
ZFP36L2	Del_3p21.31	1	1
ZFP36L2	Del_4p16.3	1	1
ZFP36L2	Del_4q35.1	1	1
ZFP36L2	Del_7p22.3	1	1
ZFP36L2	Del_9q34.2	1	1
ZFP36L2	Del_10q26.3	1	1
ZFP36L2	Del_11q13.1	1	1
ZFP36L2	Del_12p13.1	1	1
ZFP36L2	Del_12q23.1	1	1
ZFP36L2	Del_12q24.31	1	1
ZFP36L2	Del_14q24.1	1	1
ZFP36L2	Del_15q13.1	1	1
ZFP36L2	Del_20p13	1	1
ZFP36L2	Del_21q11.2	1	1
ZMYM3	17q-Amp	1	1
ZMYM3	11p-Del	1	1
ZMYM3	14q-Del	1	1
ZMYM3	1p-Del	1	1
ZMYM3	1q-Del	1	1
ZMYM3	5q-Del	1	1
ZMYM3	9q-Del	1	1
ZMYM3	Amp_3p25.1	1	1
ZMYM3	Amp_4q13.3	1	1
ZMYM3	Amp_11q13.3	1	1
ZMYM3	Amp_13q34	1	1
ZMYM3	Amp_14q21.1	1	1
ZMYM3	Del_2q37.3	1	1
ZMYM3	Del_5q11.2	1	1
ZMYM3	Del_6p25.3	1	1
ZMYM3	Del_7p22.3	1	1
ZMYM3	Del_9q21.11	1	1
ZMYM3	Del_9q34.2	1	1
ZMYM3	Del_10q23.31	1	1
ZMYM3	Del_11q13.1	1	1
ZMYM3	Del_12p13.1	1	1
ZMYM3	Del_12q24.31	1	1
ZMYM3	Del_14q24.1	1	1
ZMYM3	Del_20p13	1	1
ZMYM3	Del_21q11.2	1	1
ZNF362	17q-Amp	1	1
ZNF362	7p-Amp	1	1
ZNF362	8p-Amp	1	1
ZNF362	8q-Amp	1	1
ZNF362	11p-Del	1	1
ZNF362	11q-Del	1	1
ZNF362	14q-Del	1	1
ZNF362	15q-Del	1	1
ZNF362	16p-Del	1	1
ZNF362	16q-Del	1	1
ZNF362	17q-Del	1	1
ZNF362	18p-Del	1	1
ZNF362	18q-Del	1	1
ZNF362	1p-Del	1	1
ZNF362	1q-Del	1	1
ZNF362	5q-Del	1	1
ZNF362	9q-Del	1	1
ZNF362	Amp_1p22.3	1	1
ZNF362	Amp_3p25.1	1	1
ZNF362	Amp_4q13.3	1	1
ZNF362	Amp_6p23	1	1
ZNF362	Amp_6q21	1	1
ZNF362	Amp_10p15.1	1	1
ZNF362	Amp_10q22.3	1	1
ZNF362	Amp_11p13	1	1
ZNF362	Amp_13q34	1	1
ZNF362	Amp_14q21.1	1	1
ZNF362	Amp_15q26.3	1	1
ZNF362	Amp_17q23.1	1	1
ZNF362	Amp_19p13.12	1	1
ZNF362	Del_1p36.13	1	1
ZNF362	Del_1p22.1	1	1
ZNF362	Del_2q37.3	1	1
ZNF362	Del_5q11.2	1	1
ZNF362	Del_6p25.3	1	1
ZNF362	Del_7p22.3	1	1
ZNF362	Del_7q36.1	1	1
ZNF362	Del_9q21.11	1	1
ZNF362	Del_9q34.2	1	1
ZNF362	Del_10q23.31	1	1
ZNF362	Del_10q26.3	1	1
ZNF362	Del_11q13.1	1	1
ZNF362	Del_12p13.1	1	1
ZNF362	Del_12q24.31	1	1
ZNF362	Del_15q13.1	1	1
ZNF362	Del_16q24.3	1	1
ZNF362	Del_17q21.31	1	1
ZNF362	Del_18q23	1	1
16p-Amp	16p-Del	1	1
17q-Amp	7p-Amp	1	1
17q-Amp	7q-Amp	1	1
17q-Amp	17q-Del	1	1
17q-Amp	Amp_6q21	1	1
17q-Amp	Del_12q24.31	1	1
1q-Amp	1q-Del	1	1
20p-Amp	Del_20p13	1	1
5p-Amp	1q-Del	1	1
7p-Amp	Del_12q23.1	1	1
7p-Amp	Del_12q24.31	1	1
7q-Amp	1q-Del	1	1
7q-Amp	4q-Del	1	1
7q-Amp	Amp_4q13.3	1	1
7q-Amp	Del_19q13.32	1	1
8p-Amp	1q-Del	1	1
8p-Amp	8p-Del	1	1
16q-Del	Amp_10p15.1	1	1
1p-Del	Amp_4q13.3	1	1
1p-Del	Amp_10q22.3	1	1
1p-Del	Amp_19p13.12	1	1
1q-Del	Amp_1p22.3	1	1
1q-Del	Amp_1q21.3	1	1
1q-Del	Amp_1q44	1	1
1q-Del	Amp_4q13.3	1	1
1q-Del	Amp_10q22.3	1	1
1q-Del	Amp_14q21.1	1	1
1q-Del	Amp_19p13.12	1	1
1q-Del	Amp_19q12	1	1
1q-Del	Amp_19q13.42	1	1
1q-Del	Del_6p25.3	1	1
1q-Del	Del_7q36.1	1	1
1q-Del	Del_12q24.31	1	1
Amp_3q26.32	Del_16q24.3	1	1
Amp_4q13.3	Amp_19p13.12	1	1
Amp_10p15.1	Del_16q24.3	1	1
Amp_12p13.33	Del_16q24.3	1	1
Amp_19q12	Del_16q24.3	1	1
Del_7p22.3	Del_17p12	1.01e-05	1
Del_3p21.31	Del_7p22.3	1.01e-07	1
Del_10q26.3	Del_19p13.3	1.01e-07	1
Del_6p25.3	Del_6q15	1.01e-08	1
17p-Del	Del_6q27	1.01e-09	1
11p-Del	Del_8p23.2	1.02e-05	1
1p-Del	Del_22q13.32	1.02e-05	1
Del_5q21.3	Del_9q34.2	1.02e-06	1
17p-Del	Del_8p23.2	1.02e-07	1
Del_11q23.3	Del_17q21.31	1.02e-08	1
16q-Del	Del_17p12	1.02e-12	1
Del_9p23	Del_11q25	1.02e-14	1
4p-Del	Del_10q26.3	1.03e-08	1
Del_1p36.13	Del_11q23.3	1.04e-16	1
22q-Del	Del_12p13.1	1.05e-06	1
18p-Del	Del_3p21.31	1.05e-08	1
Del_10q23.31	Del_11q25	1.05e-08	1
11q-Del	Del_16q24.3	1.05e-12	1
13q-Del	16q-Del	1.06e-05	1
22q-Del	Del_9p23	1.06e-08	1
11p-Del	Del_9p21.3	1.07e-06	1
Del_13q14.2	Del_20p13	1.07e-07	1
Amp_8p11.21	Amp_8q24.21	1.07e-33	1
Del_9p21.3	Del_15q13.1	1.08e-05	1
18q-Del	Del_11q23.3	1.08e-06	1
Del_6q15	Del_13q14.2	1.08e-10	1
8q-Amp	Amp_6p23	1.09e-05	1
17q-Del	Del_4p16.3	1.11e-05	1
Amp_19q12	Del_5q11.2	1.11e-05	1
17q-Del	18q-Del	1.11e-08	1
Del_9q34.2	Del_14q24.1	1.11e-14	1
22q-Del	Del_1p22.1	1.12e-05	1
4q-Del	Amp_3q26.32	1.12e-05	1
18p-Del	Del_12q23.1	1.12e-06	1
Del_1p36.13	Del_4p16.3	1.12e-10	1
Del_1p36.13	Del_13q14.2	1.12e-11	1
Del_3p21.31	Del_9p23	1.12e-11	1
11p-Del	Del_11p15.5	1.12e-20	1
17p-Del	Del_2q37.3	1.13e-07	1
11q-Del	Del_1p36.13	1.13e-09	1
9q-Del	Del_6q27	1.14e-05	1
18p-Del	Del_11q25	1.14e-07	1
13q-Del	Del_9q21.11	1.15e-05	1
11p-Del	4p-Del	1.15e-06	1
9p-Del	Del_10q23.31	1.15e-10	1
16q-Del	Del_11q13.1	1.16e-06	1
Del_2q37.3	Del_17q21.31	1.16e-06	1
Del_12p13.1	Del_17p12	1.17e-05	1
16q-Del	Del_6q15	1.17e-07	1
17p-Del	Del_11q25	1.17e-16	1
Del_13q14.2	Del_19p13.3	1.18e-08	1
8q-Amp	Amp_20q13.2	1.18e-10	1
4p-Del	Del_5q11.2	1.18e-15	1
11q-Del	Del_8p23.2	1.19e-05	1
6q-Del	Del_22q13.32	1.19e-06	1
Del_8p23.2	Del_10q26.3	1.19e-06	1
Del_11q25	Del_19p13.3	1.19e-07	1
14q-Del	5q-Del	1.19e-09	1
Del_2q37.3	Del_13q14.2	1.1e-06	1
14q-Del	Del_15q13.1	1.1e-12	1
8q-Amp	Del_8p23.2	1.1e-13	1
Del_9q21.11	Del_9q34.2	1.1e-39	1
Del_5q11.2	Del_17p12	1.21e-05	1
Del_19p13.3	Del_21q11.2	1.21e-06	1
17q-Amp	Amp_17q12	1.21e-14	1
Del_3p21.31	Del_12p13.1	1.22e-05	1
Del_10q26.3	Del_11q23.3	1.22e-06	1
11p-Del	Del_1p22.1	1.23e-06	1
Del_9p21.3	Del_13q14.2	1.23e-09	1
Del_3p21.31	Del_13q14.2	1.23e-13	1
Amp_1p22.3	Amp_1q21.3	1.23e-28	1
5q-Del	Del_12q23.1	1.24e-05	1
5q-Del	Del_12q24.31	1.24e-05	1
Del_1p36.13	Del_19p13.3	1.24e-10	1
9p-Del	Del_9q21.11	1.24e-25	1
Del_11q13.1	Del_11q25	1.24e-31	1
14q-Del	Del_2q37.3	1.25e-05	1
Del_2q37.3	Del_14q24.1	1.25e-05	1
15q-Del	16p-Del	1.25e-07	1
Del_9p23	Del_18q23	1.25e-08	1
8p-Del	Del_19q13.32	1.26e-05	1
Amp_13q34	Del_4p16.3	1.26e-05	1
9p-Del	Del_6q27	1.26e-06	1
Del_5q11.2	Del_10q23.31	1.26e-07	1
11q-Del	Del_11q25	1.26e-76	1
9p-Del	Del_9p21.3	1.26e-80	1
17q-Del	9p-Del	1.27e-05	1
9q-Del	Del_17q21.31	1.27e-06	1
18p-Del	Del_1p36.13	1.27e-09	1
8p-Del	Del_11q23.3	1.27e-13	1
1p-Del	Del_1p36.13	1.27e-31	1
Del_5q21.3	Del_10q23.31	1.28e-05	1
6q-Del	Del_6q27	1.28e-66	1
Del_8p23.2	Del_19q13.32	1.29e-05	1
16q-Del	Amp_1q21.3	1.29e-06	1
11q-Del	Del_6q15	1.29e-07	1
Del_12q23.1	Del_17q21.31	1.29e-07	1
8p-Del	Amp_8q24.21	1.29e-08	1
17p-Del	Del_1p36.13	1.29e-12	1
9p-Del	Del_9q34.2	1.29e-25	1
16q-Del	Amp_1q44	1.2e-05	1
4p-Del	Del_10q23.31	1.2e-06	1
Del_3p21.31	Del_18q23	1.2e-08	1
14q-Del	Del_9q21.11	1.2e-09	1
11p-Del	Del_11q23.3	1.2e-27	1
9q-Del	Del_9p23	1.2e-27	1
11q-Del	Del_10q23.31	1.31e-05	1
Amp_8p11.21	Amp_11q13.3	1.31e-05	1
TP53	Del_11p15.5	1.31e-06	1
4p-Del	Del_12q23.1	1.31e-06	1
Del_4p16.3	Del_19q13.32	1.31e-06	1
Del_5q11.2	Del_19q13.32	1.31e-06	1
5q-Del	Del_8p23.2	1.32e-06	1
Del_10q23.31	Del_19p13.3	1.32e-07	1
Del_18q23	Del_22q13.32	1.33e-05	1
16q-Del	Del_1p22.1	1.33e-06	1
Del_10q23.31	Del_11p15.5	1.33e-06	1
11q-Del	17p-Del	1.33e-13	1
9p-Del	Del_10q26.3	1.34e-08	1
17p-Del	Del_11q23.3	1.34e-22	1
Del_12q24.31	Del_17p12	1.35e-08	1
Del_17p12	Del_22q13.32	1.35e-12	1
22q-Del	Del_1p36.13	1.36e-06	1
CBFB	16q-Del	1.37e-06	1
17q-Del	Del_9p23	1.37e-07	1
Del_1p36.13	Del_16q24.3	1.37e-07	1
17q-Del	Del_9p21.3	1.38e-05	1
Amp_19p13.12	Del_8p23.2	1.38e-05	1
Del_4q35.1	Del_11q25	1.38e-05	1
13q-Del	17q-Del	1.38e-07	1
17p-Del	6q-Del	1.38e-08	1
Amp_1p22.3	Amp_10p15.1	1.39e-06	1
Del_9p21.3	Del_17q21.31	1.39e-10	1
11q-Del	22q-Del	1.3e-07	1
Amp_10p15.1	Del_5q11.2	1.3e-11	1
17p-Del	Del_18q23	1.41e-08	1
17p-Del	22q-Del	1.41e-09	1
Amp_10p15.1	Amp_12p13.33	1.42e-06	1
5q-Del	Amp_8q24.21	1.42e-07	1
Del_5q21.3	Del_10q26.3	1.42e-07	1
4p-Del	9p-Del	1.43e-05	1
Del_6q15	Del_11q13.1	1.43e-05	1
Amp_8q24.21	Amp_14q21.1	1.43e-06	1
Del_4q35.1	Del_19p13.3	1.43e-08	1
5q-Del	Del_15q13.1	1.43e-15	1
13q-Del	Del_6q27	1.44e-05	1
Del_11q23.3	Del_14q24.1	1.44e-08	1
Del_7p22.3	Del_14q24.1	1.45e-05	1
4q-Del	Del_19q13.32	1.45e-06	1
18p-Del	Del_11q23.3	1.45e-08	1
18p-Del	Del_4p16.3	1.46e-05	1
20q-Amp	Amp_11q13.3	1.46e-09	1
Amp_20q13.2	Del_21q11.2	1.47e-05	1
Del_1p22.1	Del_11q23.3	1.47e-17	1
20q-Amp	8q-Amp	1.49e-08	1
4p-Del	Del_19p13.3	1.49e-10	1
Del_10q26.3	Del_17p12	1.49e-11	1
Del_11q23.3	Del_17p12	1.49e-24	1
14q-Del	6q-Del	1.4e-06	1
Del_9p23	Del_10q23.31	1.4e-06	1
Amp_17q12	Del_17p12	1.4e-07	1
17q-Del	18p-Del	1.4e-08	1
13q-Del	Del_6p25.3	1.51e-05	1
Del_6q27	Del_14q24.1	1.52e-07	1
17q-Amp	Amp_17q23.1	1.52e-24	1
Del_1p36.13	Del_1p22.1	1.52e-26	1
Amp_3q26.32	Del_15q13.1	1.53e-05	1
Del_3p21.31	Del_6q27	1.53e-06	1
Del_6q15	Del_9p23	1.53e-09	1
Del_4q35.1	Del_19q13.32	1.54e-05	1
Amp_15q26.3	Del_11p15.5	1.54e-06	1
9p-Del	Del_13q14.2	1.54e-08	1
Amp_11q13.3	Amp_20q13.2	1.54e-09	1
Del_9p21.3	Del_10q23.31	1.54e-09	1
Del_3p21.31	Del_4p16.3	1.54e-12	1
Del_3p21.31	Del_5q11.2	1.54e-12	1
Del_4q35.1	Del_18q23	1.55e-06	1
TP53	Del_4q35.1	1.55e-09	1
Del_2q37.3	Del_5q21.3	1.55e-09	1
13q-Del	Del_14q24.1	1.55e-11	1
Del_9q21.11	Del_22q13.32	1.58e-07	1
Del_9p23	Del_9q34.2	1.58e-19	1
Del_8p23.2	Del_16q24.3	1.59e-05	1
17p-Del	4q-Del	1.59e-07	1
Del_1p36.13	Del_17p12	1.59e-09	1
Del_9p23	Del_13q14.2	1.59e-10	1
5q-Del	Del_4q35.1	1.59e-13	1
16p-Del	Del_9q34.2	1.5e-07	1
Del_11q23.3	Del_18q23	1.5e-09	1
16q-Del	Del_13q14.2	1.61e-06	1
Del_15q13.1	Del_19p13.3	1.61e-13	1
TP53	Amp_6q21	1.62e-07	1
Del_3p21.31	Del_10q26.3	1.62e-12	1
20q-Amp	Amp_20q13.2	1.62e-75	1
Del_2q37.3	Del_6q27	1.63e-05	1
Amp_1q21.3	Amp_1q44	1.64e-102	1
20p-Amp	20q-Amp	1.64e-77	1
Del_1p22.1	Del_9p23	1.65e-06	1
Del_11q13.1	Del_16q24.3	1.65e-07	1
11p-Del	Del_17p12	1.65e-09	1
Amp_11q14.1	Del_11q25	1.65e-12	1
4q-Del	Del_4p16.3	1.65e-37	1
Del_9p23	Del_9p21.3	1.65e-88	1
4p-Del	Amp_3q26.32	1.66e-07	1
Del_6q15	Del_11q25	1.66e-10	1
4p-Del	Del_17p12	1.66e-12	1
Del_16q24.3	Del_22q13.32	1.66e-13	1
Del_4p16.3	Del_4q35.1	1.66e-24	1
Del_17p12	Del_19p13.3	1.67e-13	1
Del_9p21.3	Del_9q34.2	1.68e-17	1
4q-Del	Del_13q14.2	1.69e-06	1
Del_1p22.1	Del_9p21.3	1.69e-07	1
Del_11q23.3	Del_22q13.32	1.69e-14	1
15q-Del	Del_11q23.3	1.6e-05	1
Del_9q21.11	Del_10q26.3	1.6e-05	1
Del_11q23.3	Del_20p13	1.6e-05	1
5q-Del	Del_17p12	1.6e-06	1
Del_9p23	Del_22q13.32	1.71e-06	1
Del_5q21.3	Del_20p13	1.71e-07	1
22q-Del	Del_22q13.32	1.71e-135	1
17p-Del	Del_17q21.31	1.71e-38	1
Del_1p22.1	Del_14q24.1	1.72e-05	1
Del_4p16.3	Del_13q14.2	1.72e-10	1
Amp_8q24.21	Del_10q26.3	1.73e-05	1
Amp_17q23.1	Del_9p23	1.73e-05	1
Amp_17q23.1	Del_17p12	1.73e-08	1
Del_11q25	Del_14q24.1	1.73e-08	1
APC	KDM6A	1.74e-06	1
9p-Del	Del_11q25	1.74e-09	1
Del_6q27	Del_11q23.3	1.74e-10	1
15q-Del	Del_1p36.13	1.75e-06	1
TP53	Del_5q21.3	1.75e-16	1
11q-Del	Del_11q13.1	1.75e-31	1
CBFB	Del_16q24.3	1.76e-05	1
14q-Del	Del_6q27	1.76e-07	1
20q-Amp	Del_21q11.2	1.77e-05	1
4p-Del	Del_3p21.31	1.77e-13	1
TP53	Del_5q11.2	1.77e-16	1
9q-Del	Del_9q21.11	1.77e-53	1
16p-Del	Del_2q37.3	1.78e-07	1
18p-Del	9p-Del	1.78e-07	1
22q-Del	Del_9p21.3	1.78e-08	1
Del_9p23	Del_11q23.3	1.78e-17	1
CDH1	PIK3CA	1.79e-05	1
Amp_11q14.1	Del_11q23.3	1.79e-15	1
18q-Del	Del_3p21.31	1.7e-06	1
15q-Del	Del_4p16.3	1.7e-07	1
Del_5q11.2	Del_20p13	1.7e-07	1
TP53	Del_17q21.31	1.7e-08	1
Amp_8q24.21	Del_1p36.13	1.81e-06	1
5q-Del	Del_5q11.2	1.81e-44	1
4q-Del	Del_4q35.1	1.81e-47	1
13q-Del	Del_10q23.31	1.82e-05	1
Del_1p22.1	Del_10q26.3	1.82e-05	1
Del_2q37.3	Del_9p21.3	1.82e-05	1
16p-Del	5q-Del	1.83e-05	1
Del_11p15.5	Del_13q14.2	1.83e-08	1
Del_3p21.31	Del_17q21.31	1.83e-20	1
Del_12q23.1	Del_18q23	1.84e-05	1
Del_12q24.31	Del_18q23	1.84e-05	1
5q-Del	Del_17q21.31	1.84e-06	1
Amp_8q24.21	Del_11p15.5	1.84e-06	1
Amp_17q23.1	Del_17q21.31	1.84e-08	1
Del_4q35.1	Del_20p13	1.84e-08	1
Del_15q13.1	Del_20p13	1.84e-08	1
11q-Del	Del_17p12	1.84e-16	1
Del_4p16.3	Del_11p15.5	1.85e-06	1
Del_10q23.31	Del_15q13.1	1.85e-06	1
13q-Del	Del_17p12	1.86e-18	1
8q-Amp	Amp_14q21.1	1.87e-05	1
Del_17p12	Del_17q21.31	1.87e-32	1
4p-Del	Del_4q35.1	1.87e-34	1
14q-Del	Del_18q23	1.88e-05	1
Del_9q21.11	Del_10q23.31	1.88e-05	1
Del_9p21.3	Del_19p13.3	1.88e-06	1
13q-Del	Del_11p15.5	1.89e-05	1
16p-Del	Del_17p12	1.89e-05	1
17p-Del	Del_11q13.1	1.89e-06	1
14q-Del	Del_9p21.3	1.89e-09	1
Del_8p23.2	Del_19p13.3	1.89e-09	1
Del_11q25	Del_13q14.2	1.89e-16	1
8p-Del	Amp_20q13.2	1.8e-05	1
Del_17p12	Del_21q11.2	1.8e-05	1
Del_17q21.31	Del_19p13.3	1.8e-05	1
Del_2q37.3	Del_4p16.3	1.91e-06	1
Del_9p21.3	Del_18q23	1.92e-10	1
TP53	Amp_10p15.1	1.92e-14	1
Del_4q35.1	Del_11p15.5	1.93e-09	1
Del_4q35.1	Del_14q24.1	1.93e-09	1
Del_6p25.3	Del_6q27	1.94e-08	1
17p-Del	Del_16q24.3	1.94e-16	1
Amp_6p23	Del_5q21.3	1.95e-05	1
Del_6q27	Del_22q13.32	1.95e-05	1
Del_2q37.3	Del_17p12	1.95e-06	1
Amp_10p15.1	Del_15q13.1	1.95e-07	1
Del_16q24.3	Del_17p12	1.96e-20	1
11q-Del	Del_9p21.3	1.97e-06	1
Amp_11q13.3	Amp_11q14.1	1.97e-38	1
Del_9q21.11	Del_11q25	1.98e-05	1
11q-Del	18p-Del	1.99e-05	1
Amp_19q12	Del_19p13.3	1.99e-05	1
Del_1p36.13	Del_9q34.2	1.99e-06	1
16p-Del	Del_11q25	1.99e-07	1
13q-Del	Del_9p21.3	1.99e-10	1
11p-Del	22q-Del	1.9e-05	1
4q-Del	Del_2q37.3	1.9e-05	1
Del_5q21.3	Del_19q13.32	1.9e-05	1
17p-Del	Del_9p21.3	1.9e-09	1
Del_3p21.31	Del_19p13.3	1.9e-10	1
15q-Del	Del_4q35.1	1e-07	1
4p-Del	Del_13q14.2	1e-08	1
4q-Del	Del_9q34.2	2.01e-08	1
14q-Del	9q-Del	2.01e-09	1
Del_6p25.3	Del_13q14.2	2.02e-07	1
Del_11p15.5	Del_19p13.3	2.02e-07	1
Del_6q27	Del_16q24.3	2.03e-05	1
8p-Del	Amp_8p11.23	2.03e-10	1
5q-Del	Del_5q21.3	2.03e-56	1
Amp_3q26.32	Amp_12p13.33	2.04e-06	1
Del_5q21.3	Del_12q23.1	2.04e-06	1
Del_5q21.3	Del_12q24.31	2.04e-06	1
8p-Del	Del_17p12	2.04e-07	1
5q-Del	Del_14q24.1	2.04e-09	1
9q-Del	Del_10q26.3	2.05e-05	1
Del_17p12	Del_19q13.32	2.05e-06	1
Amp_17q23.1	Amp_20q13.2	2.05e-11	1
Amp_8q24.21	Amp_19p13.12	2.06e-05	1
Del_9q34.2	Del_13q14.2	2.06e-07	1
4p-Del	Del_15q13.1	2.06e-11	1
18p-Del	Del_2q37.3	2.07e-05	1
5q-Del	Amp_15q26.3	2.07e-05	1
Del_9q21.11	Del_11q13.1	2.07e-05	1
Amp_8p11.23	Del_11q13.1	2.08e-06	1
22q-Del	Del_13q14.2	2.08e-08	1
8p-Amp	Amp_8p11.23	2.08e-16	1
9q-Del	Del_5q21.3	2.09e-05	1
Del_8p23.2	Del_9p23	2.09e-07	1
Del_4p16.3	Del_19p13.3	2.09e-11	1
8p-Del	Amp_11q13.3	2.11e-08	1
18q-Del	Del_1p36.13	2.11e-13	1
16p-Del	17p-Del	2.12e-05	1
Del_13q14.2	Del_16q24.3	2.12e-08	1
17p-Del	18q-Del	2.13e-08	1
Del_5q11.2	Del_15q13.1	2.13e-18	1
4q-Del	Del_19p13.3	2.14e-08	1
Del_8p23.2	Del_11p15.5	2.14e-09	1
Del_1p36.13	Del_4q35.1	2.14e-10	1
Amp_17q23.1	Del_11q25	2.15e-07	1
Del_3p21.31	Del_6p25.3	2.15e-08	1
Del_13q14.2	Del_17q21.31	2.15e-08	1
8p-Del	Del_11p15.5	2.16e-05	1
16p-Del	Del_14q24.1	2.17e-05	1
Del_11q25	Del_17p12	2.17e-18	1
Del_6q15	Del_6q27	2.17e-65	1
Amp_12p13.33	Del_15q13.1	2.18e-06	1
14q-Del	22q-Del	2.18e-07	1
14q-Del	Del_4p16.3	2.18e-08	1
1p-Del	Del_11q23.3	2.18e-08	1
Del_1p22.1	Del_19p13.3	2.19e-06	1
Del_8p23.2	Del_22q13.32	2.19e-07	1
9p-Del	Del_14q24.1	2.19e-11	1
Amp_11q13.3	Del_11q23.3	2.19e-29	1
Amp_11q13.3	Del_9p21.3	2.1e-06	1
Del_14q24.1	Del_22q13.32	2.1e-07	1
Amp_6q21	Del_5q11.2	2.21e-05	1
Del_1p22.1	Del_10q23.31	2.21e-05	1
17q-Del	Del_17p12	2.21e-33	1
Del_9q34.2	Del_20p13	2.22e-08	1
7p-Amp	7q-Amp	2.22e-32	1
Del_11q13.1	Del_11q23.3	2.22e-35	1
Del_9q21.11	Del_20p13	2.23e-05	1
9q-Del	Del_9p21.3	2.23e-29	1
6q-Del	Del_11q23.3	2.24e-07	1
15q-Del	Del_19p13.3	2.24e-09	1
Del_4q35.1	Del_17q21.31	2.24e-12	1
17p-Del	Del_11p15.5	2.25e-09	1
17p-Del	4p-Del	2.26e-10	1
1p-Del	Del_18q23	2.27e-07	1
Amp_6q21	Amp_12p13.33	2.28e-06	1
Del_9q34.2	Del_11q25	2.28e-09	1
TP53	Amp_8q24.21	2.28e-17	1
Del_1p22.1	Del_16q24.3	2.29e-10	1
16p-Del	4q-Del	2.2e-05	1
4q-Del	Del_11q23.3	2.2e-05	1
13q-Del	Del_20p13	2.2e-06	1
Del_5q21.3	Del_13q14.2	2.2e-06	1
9p-Del	Del_18q23	2.31e-06	1
Del_1p36.13	Del_11p15.5	2.32e-07	1
17p-Del	18p-Del	2.32e-09	1
11p-Del	Del_4p16.3	2.33e-05	1
18p-Del	22q-Del	2.33e-05	1
9q-Del	Del_15q13.1	2.33e-06	1
Del_6p25.3	Del_20p13	2.33e-06	1
Del_4p16.3	Del_15q13.1	2.33e-12	1
Amp_17q12	Del_8p23.2	2.35e-05	1
Del_11q23.3	Del_11q25	2.35e-152	1
17p-Del	Del_20p13	2.36e-05	1
22q-Del	Del_6p25.3	2.37e-05	1
5q-Del	Amp_13q34	2.38e-05	1
5q-Del	Amp_10p15.1	2.38e-08	1
14q-Del	Del_7p22.3	2.39e-05	1
17q-Del	Del_7p22.3	2.39e-05	1
9q-Del	Del_10q23.31	2.39e-05	1
Amp_3p25.1	Amp_3q26.32	2.39e-06	1
Del_1p36.13	Del_21q11.2	2.3e-05	1
Amp_8q24.21	Amp_19q12	2.3e-10	1
9q-Del	Del_2q37.3	2.41e-05	1
17q-Del	Del_4q35.1	2.41e-09	1
Del_9p23	Del_15q13.1	2.42e-05	1
Amp_8q24.21	Amp_12p13.33	2.42e-07	1
Del_6q27	Del_11q25	2.43e-09	1
1q-Amp	Amp_1q44	2.43e-101	1
Amp_17q12	Amp_17q23.1	2.43e-27	1
22q-Del	Del_15q13.1	2.44e-05	1
8p-Del	Del_9p21.3	2.44e-05	1
Del_5q11.2	Del_12q24.31	2.44e-05	1
CDH1	1q-Amp	2.45e-05	1
15q-Del	Del_11p15.5	2.46e-07	1
4p-Del	Del_9q34.2	2.46e-07	1
22q-Del	Del_19p13.3	2.46e-08	1
Del_11q25	Del_19q13.32	2.47e-05	1
Del_1p36.13	Del_6q15	2.49e-05	1
8p-Del	Del_8p23.2	2.49e-95	1
Del_9q34.2	Del_15q13.1	2.4e-07	1
18p-Del	Del_9p21.3	2.4e-09	1
Amp_10p15.1	Amp_19q12	2.51e-11	1
Del_1p36.13	Del_20p13	2.53e-05	1
17q-Del	4q-Del	2.53e-06	1
18p-Del	4p-Del	2.53e-06	1
13q-Del	Del_6q15	2.53e-09	1
Del_3p21.31	Del_11p15.5	2.55e-18	1
Del_10q26.3	Del_13q14.2	2.57e-10	1
TP53	14q-Del	2.58e-05	1
Del_6p25.3	Del_14q24.1	2.58e-07	1
Del_9p23	Del_17q21.31	2.58e-11	1
4p-Del	Amp_10p15.1	2.5e-05	1
Del_4p16.3	Del_9p21.3	2.5e-05	1
Del_4q35.1	Del_11q23.3	2.5e-05	1
Del_11q23.3	Del_15q13.1	2.5e-05	1
4p-Del	Del_4p16.3	2.5e-72	1
TP53	Del_21q11.2	2.61e-06	1
Del_6q15	Del_22q13.32	2.63e-08	1
Del_1p36.13	Del_3p21.31	2.63e-13	1
22q-Del	Del_8p23.2	2.64e-06	1
Amp_8p11.23	Del_8p23.2	2.64e-17	1
8q-Amp	Amp_8p11.23	2.64e-24	1
4p-Del	Del_22q13.32	2.65e-05	1
Del_17p12	Del_20p13	2.65e-06	1
Del_2q37.3	Del_4q35.1	2.65e-09	1
Del_2q37.3	Del_15q13.1	2.65e-09	1
17p-Del	Del_10q23.31	2.66e-05	1
Amp_10p15.1	Del_5q21.3	2.66e-14	1
17q-Amp	20q-Amp	2.67e-05	1
11p-Del	Del_7p22.3	2.67e-06	1
16p-Del	17q-Del	2.67e-07	1
Amp_17q12	Del_17q21.31	2.67e-07	1
11q-Del	Del_11q23.3	2.67e-84	1
15q-Del	4q-Del	2.68e-05	1
4q-Del	9q-Del	2.68e-05	1
13q-Del	Del_8p23.2	2.68e-09	1
4p-Del	5q-Del	2.68e-12	1
1q-Amp	16q-Del	2.69e-08	1
4q-Del	Del_14q24.1	2.6e-09	1
Del_9q34.2	Del_10q23.31	2.6e-09	1
Amp_11q13.3	Del_11q25	2.72e-27	1
Del_12q23.1	Del_12q24.31	2.72e-32	1
Del_13q14.2	Del_21q11.2	2.73e-05	1
Del_11p15.5	Del_11q13.1	2.73e-06	1
Amp_11q13.3	Amp_17q23.1	2.73e-07	1
Amp_20q13.2	Del_9p21.3	2.73e-07	1
Del_5q21.3	Del_11p15.5	2.73e-11	1
17q-Del	Del_15q13.1	2.75e-05	1
13q-Del	Del_16q24.3	2.75e-08	1
4q-Del	Del_17p12	2.75e-08	1
Amp_19p13.12	Amp_19q12	2.76e-07	1
17p-Del	17q-Del	2.76e-48	1
Del_4q35.1	Del_22q13.32	2.77e-05	1
Del_9p23	Del_19p13.3	2.77e-07	1
Amp_13q34	Del_15q13.1	2.79e-05	1
Del_1p22.1	Del_18q23	2.79e-07	1
4p-Del	Del_20p13	2.79e-08	1
14q-Del	Del_6p25.3	2.7e-05	1
Del_13q14.2	Del_18q23	2.81e-07	1
Amp_17q23.1	Del_11q23.3	2.82e-07	1
13q-Del	Del_1p36.13	2.83e-08	1
Amp_8q24.21	Del_5q21.3	2.84e-08	1
Del_4p16.3	Del_5q21.3	2.85e-19	1
Amp_11q13.3	Del_11q13.1	2.86e-19	1
14q-Del	Del_11q23.3	2.88e-05	1
Del_9q21.11	Del_17p12	2.88e-06	1
9q-Del	Del_22q13.32	2.88e-07	1
Del_8p23.2	Del_9q34.2	2.89e-05	1
Amp_8q24.21	Amp_12q15	2.8e-05	1
Del_14q24.1	Del_19q13.32	2.8e-05	1
PTPN22	TGS1	2.8e-06	1
Del_8p23.2	Del_21q11.2	2.91e-05	1
14q-Del	Del_10q26.3	2.91e-06	1
4q-Del	Del_11q25	2.92e-05	1
Amp_8p11.21	Del_13q14.2	2.93e-05	1
Amp_11p13	Amp_19q13.42	2.94e-05	1
Del_3p21.31	Del_12q23.1	2.94e-05	1
Del_6q15	Del_8p23.2	2.94e-07	1
Del_6q27	Del_9p23	2.95e-07	1
Del_11q25	Del_22q13.32	2.95e-11	1
11q-Del	Del_9p23	2.96e-09	1
5q-Del	Del_11p15.5	2.97e-10	1
22q-Del	Del_16q24.3	2.97e-16	1
18q-Del	9p-Del	2.98e-08	1
18q-Del	Del_9p23	2.99e-08	1
Amp_10p15.1	Del_4q35.1	2.9e-06	1
TP53	17q-Del	2e-04	1
18p-Del	Del_22q13.32	2e-05	1
Del_4p16.3	Del_8p23.2	2e-06	1
13q-Del	Del_9p23	2e-10	1
Del_4q35.1	Del_12q24.31	2e-10	1
17p-Del	Del_13q14.2	2e-18	1
Del_3p21.31	Del_12q24.31	3.01e-07	1
Amp_19q13.42	Amp_20q13.2	3.02e-06	1
16p-Del	Del_17q21.31	3.02e-07	1
Del_3p21.31	Del_20p13	3.02e-10	1
4p-Del	Del_1p36.13	3.02e-12	1
Amp_12p13.33	Del_5q11.2	3.03e-08	1
11p-Del	Del_10q26.3	3.04e-07	1
Del_9p21.3	Del_19q13.32	3.05e-05	1
17p-Del	Del_19q13.32	3.05e-06	1
11q-Del	Del_22q13.32	3.05e-07	1
5q-Del	Del_9q34.2	3.06e-06	1
13q-Del	14q-Del	3.06e-08	1
Amp_8p11.23	Amp_20q13.2	3.07e-05	1
16p-Del	Del_4q35.1	3.07e-07	1
17q-Del	Del_17q21.31	3.07e-41	1
Del_4q35.1	Del_17p12	3.08e-08	1
Del_8p23.2	Del_11q13.1	3.11e-06	1
11q-Del	Amp_11q14.1	3.11e-08	1
13q-Del	Del_11q25	3.11e-13	1
Amp_6p23	Amp_10p15.1	3.12e-06	1
Del_1p36.13	Del_18q23	3.12e-11	1
Del_5q11.2	Del_11p15.5	3.13e-08	1
14q-Del	Del_9q34.2	3.14e-12	1
Del_3p21.31	Del_15q13.1	3.14e-15	1
Amp_8p11.23	Amp_8p11.21	3.15e-66	1
11q-Del	Del_10q26.3	3.16e-05	1
Del_10q23.31	Del_18q23	3.16e-05	1
13q-Del	Del_9q34.2	3.16e-06	1
5q-Del	Del_4p16.3	3.17e-14	1
Del_11p15.5	Del_14q24.1	3.19e-08	1
11q-Del	Del_11p15.5	3.19e-12	1
17q-Del	Del_12q24.31	3.1e-06	1
Del_2q37.3	Del_19q13.32	3.21e-05	1
Amp_10p15.1	Del_4p16.3	3.21e-06	1
13q-Del	Del_3p21.31	3.21e-08	1
Del_10q23.31	Del_10q26.3	3.24e-38	1
11p-Del	Del_13q14.2	3.25e-09	1
Del_4q35.1	Del_9q34.2	3.26e-10	1
TP53	Amp_13q34	3.27e-06	1
18q-Del	Del_17q21.31	3.27e-06	1
13q-Del	Amp_20q13.2	3.29e-05	1
13q-Del	22q-Del	3.2e-06	1
17p-Del	Del_21q11.2	3.2e-06	1
11p-Del	Del_9q34.2	3.31e-06	1
13q-Del	Del_22q13.32	3.31e-06	1
Del_2q37.3	Del_9q21.11	3.31e-06	1
Del_5q11.2	Del_13q14.2	3.31e-08	1
Del_4q35.1	Del_5q21.3	3.31e-19	1
Del_5q21.3	Del_15q13.1	3.31e-19	1
Amp_6p23	Del_13q14.2	3.32e-06	1
13q-Del	Amp_17q23.1	3.33e-05	1
Amp_11q13.3	Amp_19q13.42	3.33e-05	1
Del_3p21.31	Del_10q23.31	3.33e-10	1
Del_6q15	Del_9p21.3	3.33e-10	1
Del_5q21.3	Del_19p13.3	3.34e-08	1
8p-Del	Del_22q13.32	3.35e-07	1
18q-Del	Del_18q23	3.35e-69	1
Del_11p15.5	Del_17q21.31	3.36e-07	1
9q-Del	Del_14q24.1	3.37e-11	1
MAP3K1	16p-Amp	3.3e-05	1
1p-Del	Del_11q25	3.3e-07	1
11p-Del	9p-Del	3.3e-10	1
22q-Del	Del_11q25	3.3e-10	1
Del_9q34.2	Del_10q26.3	3.3e-10	1
17p-Del	Del_19p13.3	3.3e-13	1
Del_1p22.1	Del_17p12	3.41e-09	1
4p-Del	Del_9p23	3.45e-05	1
Amp_8q24.21	Del_5q11.2	3.46e-08	1
Del_11p15.5	Del_11q25	3.46e-15	1
18p-Del	Del_4q35.1	3.47e-06	1
15q-Del	Del_15q13.1	3.49e-46	1
Del_9p21.3	Del_11p15.5	3.51e-07	1
18p-Del	Del_19p13.3	3.52e-06	1
18q-Del	Del_1p22.1	3.52e-08	1
11p-Del	Del_22q13.32	3.53e-05	1
Del_9q34.2	Del_22q13.32	3.53e-05	1
11p-Del	Del_14q24.1	3.54e-05	1
Amp_11q13.3	Del_8p23.2	3.57e-07	1
18q-Del	Del_9p21.3	3.57e-10	1
Amp_19p13.12	Del_11p15.5	3.58e-05	1
Del_4p16.3	Del_11q25	3.58e-05	1
Del_15q13.1	Del_17q21.31	3.59e-07	1
Del_8p23.2	Del_20p13	3.61e-06	1
16p-Del	Del_5q11.2	3.62e-05	1
TP53	Amp_12p13.33	3.62e-07	1
9p-Del	Del_22q13.32	3.62e-08	1
Del_1p36.13	Del_5q11.2	3.62e-08	1
Amp_10p15.1	Del_10q23.31	3.63e-05	1
15q-Del	Del_13q14.2	3.63e-11	1
18p-Del	18q-Del	3.63e-71	1
16q-Del	22q-Del	3.64e-08	1
Amp_12p13.33	Del_19p13.3	3.66e-07	1
Amp_3q26.32	Amp_6p23	3.66e-10	1
Amp_8p11.21	Del_8p23.2	3.66e-13	1
9p-Del	Amp_11q14.1	3.68e-05	1
13q-Del	Del_18q23	3.68e-06	1
13q-Del	Del_19p13.3	3.68e-06	1
14q-Del	9p-Del	3.68e-09	1
17p-Del	Del_17p12	3.68e-152	1
13q-Del	17p-Del	3.69e-15	1
Del_2q37.3	Del_9p23	3.6e-05	1
11q-Del	Amp_11q13.3	3.6e-18	1
TP53	Amp_19p13.12	3.72e-06	1
Del_15q13.1	Del_22q13.32	3.72e-06	1
20q-Amp	Del_8p23.2	3.72e-08	1
Del_9q34.2	Del_17p12	3.72e-10	1
Del_11p15.5	Del_21q11.2	3.73e-06	1
Del_10q26.3	Del_14q24.1	3.73e-12	1
Amp_8q24.21	Del_13q14.2	3.74e-05	1
Del_1p36.13	Del_11q13.1	3.75e-06	1
Del_11q25	Del_18q23	3.75e-10	1
14q-Del	Del_1p22.1	3.76e-05	1
TP53	Del_19p13.3	3.76e-07	1
15q-Del	5q-Del	3.76e-11	1
22q-Del	9q-Del	3.77e-08	1
Amp_1p22.3	Amp_8p11.21	3.78e-05	1
17p-Del	9p-Del	3.7e-10	1
16p-Del	Del_3p21.31	3.81e-07	1
Amp_14q21.1	Amp_17q23.1	3.81e-10	1
11q-Del	6q-Del	3.82e-05	1
CBFB	1q-Amp	3.82e-06	1
9q-Del	Del_11q23.3	3.82e-07	1
Del_7p22.3	Del_11q23.3	3.83e-05	1
20p-Amp	Amp_17q23.1	3.84e-05	1
5p-Amp	Amp_1q21.3	3.84e-05	1
Del_14q24.1	Del_17q21.31	3.86e-06	1
Del_11q25	Del_20p13	3.87e-08	1
Del_3p21.31	Del_17p12	3.87e-26	1
Del_4q35.1	Del_7p22.3	3.88e-05	1
Del_17q21.31	Del_22q13.32	3.88e-06	1
Amp_3q26.32	Del_4q35.1	3.89e-09	1
Amp_12q15	Del_12q23.1	3.8e-07	1
22q-Del	Del_11q23.3	3.8e-14	1
Del_1p36.13	Del_2q37.3	3.92e-10	1
Del_9p23	Del_10q26.3	3.93e-06	1
Del_19p13.3	Del_22q13.32	3.94e-07	1
16q-Del	17p-Del	3.94e-11	1
5q-Del	Del_1p36.13	3.95e-07	1
Del_2q37.3	Del_10q26.3	3.95e-07	1
Del_12p13.1	Del_14q24.1	3.96e-05	1
Amp_17q23.1	Del_13q14.2	3.97e-05	1
17p-Del	Amp_17q12	3.98e-05	1
15q-Del	4p-Del	3.98e-06	1
9p-Del	Del_8p23.2	3.98e-07	1
11q-Del	16q-Del	3.98e-12	1
Del_4p16.3	Del_11q23.3	3e-04	1
Amp_6p23	Amp_6q21	3e-05	1
13q-Del	9p-Del	3e-08	1
Del_2q37.3	Del_3p21.31	3e-11	1
17q-Del	Del_21q11.2	4.01e-05	1
16p-Del	Del_15q13.1	4.01e-08	1
18p-Del	Del_9p23	4.02e-08	1
Amp_6q21	Del_5q21.3	4.03e-05	1
4p-Del	Del_14q24.1	4.03e-13	1
11q-Del	1p-Del	4.05e-07	1
20q-Amp	Del_9p23	4.06e-05	1
17q-Del	Del_9q34.2	4.06e-07	1
17q-Del	Del_1p36.13	4.09e-07	1
Del_13q14.2	Del_22q13.32	4.11e-10	1
Del_8p23.2	Del_12q23.1	4.14e-05	1
Amp_8q24.21	Amp_17q12	4.15e-10	1
Del_9p21.3	Del_11q23.3	4.16e-15	1
Amp_20q13.2	Del_9p23	4.17e-07	1
4q-Del	Del_5q11.2	4.19e-08	1
Amp_17q23.1	Del_8p23.2	4.1e-08	1
Del_3p21.31	Del_22q13.32	4.1e-10	1
6q-Del	Del_13q14.2	4.21e-06	1
Del_1p22.1	Del_11q13.1	4.21e-06	1
Amp_20q13.2	Del_8p23.2	4.21e-11	1
Del_17q21.31	Del_21q11.2	4.25e-06	1
17p-Del	Del_4q35.1	4.2e-07	1
5q-Del	Del_20p13	4.31e-05	1
Amp_17q23.1	Del_3p21.31	4.32e-05	1
9p-Del	Del_11p15.5	4.33e-05	1
Del_4q35.1	Del_10q26.3	4.33e-09	1
Del_4p16.3	Del_21q11.2	4.35e-05	1
Amp_6p23	Amp_12p13.33	4.37e-05	1
Amp_8q24.21	Del_20p13	4.37e-05	1
Del_6q27	Del_13q14.2	4.37e-07	1
Del_4q35.1	Del_12q23.1	4.3e-07	1
8q-Amp	Amp_17q23.1	4.43e-05	1
8q-Amp	Amp_4q13.3	4.45e-05	1
8p-Amp	Amp_1p22.3	4.46e-07	1
5q-Del	Del_19p13.3	4.47e-10	1
4q-Del	Del_12q23.1	4.48e-06	1
Del_10q23.31	Del_12q24.31	4.49e-05	1
6q-Del	Del_9p21.3	4.4e-05	1
17p-Del	Del_9q34.2	4.4e-09	1
Del_5q11.2	Del_10q26.3	4.52e-09	1
Del_1p36.13	Del_10q26.3	4.53e-08	1
Amp_8p11.23	Amp_8q24.21	4.53e-24	1
Del_1p36.13	Del_19q13.32	4.55e-05	1
Del_9p21.3	Del_9q21.11	4.55e-21	1
22q-Del	8p-Del	4.57e-07	1
20p-Amp	Amp_11q13.3	4.58e-07	1
13q-Del	Del_10q26.3	4.59e-06	1
17q-Del	Del_13q14.2	4.61e-08	1
Amp_1p22.3	Del_5q11.2	4.63e-05	1
Del_6p25.3	Del_11p15.5	4.63e-06	1
17p-Del	Del_9p23	4.63e-14	1
Amp_20q13.2	Del_19p13.3	4.64e-05	1
Del_8p23.2	Del_17p12	4.66e-13	1
11q-Del	8p-Del	4.68e-05	1
Del_11q13.1	Del_19p13.3	4.6e-05	1
Del_9q21.11	Del_11q23.3	4.6e-06	1
9q-Del	Del_9q34.2	4.6e-42	1
Del_11q25	Del_12q23.1	4.72e-05	1
9p-Del	Del_6p25.3	4.74e-05	1
TP53	Amp_6p23	4.74e-06	1
Amp_3q26.32	Amp_10p15.1	4.74e-09	1
17p-Del	Del_4p16.3	4.76e-07	1
15q-Del	Del_22q13.32	4.78e-05	1
5q-Del	Del_19q13.32	4.78e-06	1
6q-Del	Del_11q25	4.78e-06	1
Del_9p21.3	Del_22q13.32	4.7e-08	1
18q-Del	1p-Del	4.7e-09	1
Del_9p21.3	Del_17p12	4.7e-13	1
Amp_12p13.33	Amp_19q12	4.82e-05	1
15q-Del	Del_14q24.1	4.82e-08	1
6q-Del	Del_6q15	4.82e-69	1
4p-Del	4q-Del	4.82e-70	1
11q-Del	9q-Del	4.87e-05	1
Del_2q37.3	Del_9q34.2	4.88e-09	1
Del_14q24.1	Del_15q13.1	4.88e-13	1
4q-Del	Del_10q26.3	4.8e-06	1
4p-Del	Del_11p15.5	4.91e-08	1
Del_9q34.2	Del_11q23.3	4.92e-06	1
Amp_19q12	Del_5q21.3	4.93e-05	1
Amp_1q21.3	Amp_10p15.1	4.94e-05	1
13q-Del	6q-Del	4.94e-06	1
4p-Del	Del_11q25	4.94e-06	1
20q-Amp	Amp_8q24.21	4.95e-10	1
14q-Del	Del_17p12	4.96e-07	1
18q-Del	Del_11q25	4.98e-05	1
4q-Del	Del_5q21.3	4.98e-09	1
Amp_12p13.33	Amp_12q15	4e-05	1
Del_19p13.3	Del_19q13.32	4e-08	1
1q-Amp	Amp_1p22.3	4e-12	1
18q-Del	22q-Del	5.01e-05	1
Amp_8q24.21	Amp_17q23.1	5.02e-11	1
Del_11q23.3	Del_16q24.3	5.02e-23	1
22q-Del	Del_17p12	5.03e-14	1
SMAD4	TGS1	5.04e-05	1
4p-Del	Del_1p22.1	5.04e-05	1
8p-Del	Amp_8p11.21	5.04e-06	1
Del_4p16.3	Del_12q23.1	5.08e-06	1
Del_4p16.3	Del_12q24.31	5.08e-06	1
Del_7p22.3	Del_8p23.2	5.09e-05	1
18q-Del	Del_22q13.32	5.11e-06	1
14q-Del	Del_5q21.3	5.11e-11	1
9p-Del	Del_1p22.1	5.12e-06	1
Del_15q13.1	Del_18q23	5.12e-06	1
Del_12q23.1	Del_15q13.1	5.13e-05	1
Del_12q24.31	Del_15q13.1	5.13e-05	1
11p-Del	Del_9p23	5.13e-09	1
Del_6q27	Del_9p21.3	5.16e-07	1
20p-Amp	8q-Amp	5.17e-06	1
TP53	Del_14q24.1	5.18e-05	1
Del_13q14.2	Del_14q24.1	5.19e-16	1
Del_5q21.3	Del_17p12	5.21e-05	1
11p-Del	Del_9q21.11	5.22e-07	1
Del_9p23	Del_20p13	5.23e-05	1
Del_12p13.1	Del_19p13.3	5.23e-05	1
Del_1p36.13	Del_22q13.32	5.26e-09	1
Del_9p21.3	Del_11q25	5.26e-13	1
11p-Del	Del_11q25	5.27e-24	1
Del_11q25	Del_15q13.1	5.29e-06	1
16p-Del	Del_11q23.3	5.2e-06	1
TP53	4p-Del	5.2e-08	1
Del_4q35.1	Del_8p23.2	5.33e-05	1
Del_8p23.2	Del_15q13.1	5.33e-05	1
13q-Del	16p-Del	5.34e-05	1
15q-Del	Del_5q11.2	5.35e-09	1
6q-Del	Del_9p23	5.36e-06	1
Amp_3q26.32	Amp_8q24.21	5.36e-07	1
Del_14q24.1	Del_19p13.3	5.39e-12	1
TP53	Amp_3q26.32	5.3e-16	1
Amp_8q24.21	Amp_20q13.2	5.3e-16	1
17q-Del	Del_2q37.3	5.43e-05	1
16q-Del	Del_1p36.13	5.45e-05	1
22q-Del	Del_3p21.31	5.45e-09	1
14q-Del	Del_19p13.3	5.47e-08	1
17q-Del	Del_19p13.3	5.47e-08	1
16q-Del	Del_16q24.3	5.47e-148	1
17q-Del	Del_22q13.32	5.48e-06	1
8p-Amp	Amp_8p11.21	5.48e-17	1
9p-Del	Del_9p23	5.4e-86	1
8p-Del	Del_14q24.1	5.51e-05	1
11q-Del	Del_9q21.11	5.52e-05	1
16q-Del	Del_11q25	5.52e-12	1
17q-Del	Del_11p15.5	5.53e-05	1
17q-Del	Del_14q24.1	5.53e-05	1
6q-Del	Del_14q24.1	5.53e-06	1
4p-Del	8p-Del	5.53e-07	1
Amp_3q26.32	Del_5q11.2	5.54e-05	1
Del_5q11.2	Del_19p13.3	5.54e-10	1
9p-Del	Del_19p13.3	5.56e-06	1
PIK3CA	Del_16q24.3	5.58e-07	1
Del_1p22.1	Del_11q25	5.63e-15	1
Del_12q23.1	Del_19q13.32	5.64e-05	1
Del_9q21.11	Del_17q21.31	5.65e-06	1
Del_10q26.3	Del_11q13.1	5.68e-05	1
Amp_11q13.3	Amp_17q12	5.68e-07	1
CDH1	ERBB2	5.69e-05	1
Del_4p16.3	Del_17p12	5.69e-09	1
11p-Del	16p-Del	5.6e-05	1
18p-Del	4q-Del	5.71e-05	1
Del_10q26.3	Del_20p13	5.71e-09	1
14q-Del	Del_6q15	5.72e-06	1
5q-Del	Del_3p21.31	5.72e-15	1
17p-Del	Del_12q24.31	5.74e-06	1
17p-Del	Del_6q15	5.75e-09	1
22q-Del	9p-Del	5.75e-10	1
17q-Del	Del_18q23	5.77e-08	1
8p-Del	Del_11q25	5.77e-13	1
11q-Del	16p-Del	5.78e-05	1
Del_3p21.31	Del_5q21.3	5.78e-17	1
13q-Del	18q-Del	5.79e-05	1
Amp_19p13.12	Amp_19q13.42	5.79e-05	1
Amp_19q12	Amp_19q13.42	5.7e-12	1
13q-Del	Del_15q13.1	5.83e-06	1
9q-Del	Del_13q14.2	5.83e-06	1
1p-Del	Del_1p22.1	5.85e-38	1
14q-Del	Del_17q21.31	5.87e-05	1
11p-Del	Del_3p21.31	5.87e-10	1
Del_3p21.31	Del_9q34.2	5.87e-10	1
TP53	Amp_19q12	5.92e-13	1
Del_1p36.13	Del_17q21.31	5.96e-05	1
Del_12q23.1	Del_17p12	5.99e-06	1
Del_2q37.3	Del_19p13.3	5.9e-05	1
17p-Del	Del_22q13.32	5.9e-09	1
Del_6q15	Del_17p12	5.9e-13	1
TP53	Del_15q13.1	5e-07	1
11p-Del	Amp_11q14.1	6.01e-07	1
20p-Amp	Del_8p23.2	6.05e-05	1
9p-Del	Del_15q13.1	6.06e-05	1
Amp_6p23	Del_15q13.1	6.06e-06	1
Del_10q23.31	Del_11q23.3	6.06e-08	1
5q-Del	Del_10q23.31	6.09e-05	1
Del_9p23	Del_19q13.32	6.11e-05	1
18p-Del	Del_12q24.31	6.11e-06	1
APC	IL1RAP	6.12e-06	1
Del_11p15.5	Del_17p12	6.12e-11	1
Amp_11q14.1	Del_11q13.1	6.13e-09	1
13q-Del	Del_11q23.3	6.13e-17	1
Del_11p15.5	Del_11q23.3	6.14e-12	1
16p-Del	Del_20p13	6.16e-05	1
18p-Del	Del_17p12	6.17e-08	1
17p-Del	Del_15q13.1	6.18e-05	1
9p-Del	Del_19q13.32	6.18e-05	1
Del_10q26.3	Del_19q13.32	6.18e-05	1
Amp_13q34	Del_4q35.1	6.19e-06	1
8p-Del	Del_3p21.31	6.19e-08	1
Del_4p16.3	Del_5q11.2	6.1e-15	1
4p-Del	Del_2q37.3	6.22e-06	1
Del_3p21.31	Del_16q24.3	6.25e-06	1
5q-Del	Amp_12p13.33	6.25e-07	1
9q-Del	Del_11q25	6.28e-07	1
13q-Del	Del_13q14.2	6.29e-111	1
17p-Del	Del_3p21.31	6.29e-22	1
Del_5q11.2	Del_14q24.1	6.2e-11	1
Amp_3q26.32	Amp_6q21	6.32e-05	1
Del_3p21.31	Del_8p23.2	6.32e-13	1
18q-Del	Del_13q14.2	6.34e-07	1
4p-Del	Del_19q13.32	6.35e-09	1
Del_11q13.1	Del_17p12	6.36e-07	1
4p-Del	Del_18q23	6.38e-05	1
14q-Del	15q-Del	6.38e-07	1
14q-Del	Del_20p13	6.38e-07	1
11p-Del	18p-Del	6.3e-05	1
11q-Del	Del_3p21.31	6.42e-08	1
Del_3p21.31	Del_9p21.3	6.43e-14	1
Del_10q26.3	Del_11p15.5	6.47e-08	1
5q-Del	Del_2q37.3	6.48e-07	1
Amp_6p23	Amp_8q24.21	6.49e-09	1
Del_1p36.13	Del_9p21.3	6.51e-07	1
9q-Del	Del_11q13.1	6.52e-06	1
8p-Del	Del_12q23.1	6.53e-05	1
8p-Del	Del_11q13.1	6.54e-05	1
Del_1p22.1	Del_3p21.31	6.56e-06	1
PTEN	Del_10q23.31	6.57e-05	1
9p-Del	Del_6q15	6.57e-08	1
Del_10q26.3	Del_11q25	6.57e-09	1
MLL3	TGS1	6.58e-05	1
9q-Del	Del_5q11.2	6.58e-05	1
Amp_12p13.33	Del_2q37.3	6.58e-05	1
9p-Del	9q-Del	6.61e-45	1
Del_1p36.13	Del_14q24.1	6.62e-08	1
17q-Amp	Del_8p23.2	6.65e-06	1
NCOR1	SMAD2	6.66e-05	1
11q-Del	9p-Del	6.66e-08	1
Del_10q26.3	Del_17q21.31	6.67e-06	1
Del_13q14.2	Del_17p12	6.68e-23	1
4q-Del	Del_17q21.31	6.71e-10	1
16p-Del	Del_16q24.3	6.71e-11	1
20p-Amp	Del_21q11.2	6.75e-05	1
Del_6q15	Del_11q23.3	6.75e-14	1
Del_1p36.13	Del_12p13.1	6.76e-05	1
Del_4p16.3	Del_9p23	6.76e-05	1
Del_10q23.31	Del_17p12	6.79e-09	1
Del_4q35.1	Del_10q23.31	6.7e-06	1
4p-Del	Del_11q23.3	6.82e-06	1
22q-Del	Del_17q21.31	6.84e-06	1
4p-Del	Del_5q21.3	6.85e-16	1
Amp_8q24.21	Amp_10q22.3	6.86e-05	1
NCOR1	SPEN	6.86e-07	1
Del_8p23.2	Del_14q24.1	6.87e-08	1
Amp_8p11.23	Del_11q25	6.88e-05	1
Del_1p36.13	Del_8p23.2	6.88e-09	1
Del_6p25.3	Del_9p21.3	6.89e-05	1
TP53	4q-Del	6.89e-06	1
Del_9p23	Del_11p15.5	6.89e-06	1
17q-Amp	Amp_8q24.21	6.8e-06	1
Del_6q27	Del_11q13.1	6.91e-06	1
Amp_15q26.3	Del_15q13.1	6.91e-07	1
Del_5q21.3	Del_17q21.31	6.93e-07	1
22q-Del	Del_6q15	6.94e-10	1
Del_10q23.31	Del_19q13.32	6.98e-05	1
Amp_13q34	Del_2q37.3	6.98e-06	1
8p-Del	Del_20p13	6.99e-07	1
Del_11q25	Del_16q24.3	6.99e-16	1
Amp_10p15.1	Del_10q26.3	6e-09	1
Del_9p23	Del_14q24.1	6e-10	1
4q-Del	Del_12q24.31	7.01e-07	1
14q-Del	Del_14q24.1	7.01e-64	1
Amp_8q24.21	Amp_10p15.1	7.02e-13	1
6q-Del	Del_16q24.3	7.03e-06	1
Del_17q21.31	Del_18q23	7.03e-09	1
16p-Del	Del_13q14.2	7.04e-07	1
Del_5q11.2	Del_9q34.2	7.05e-08	1
Amp_11q13.3	Del_9p23	7.07e-06	1
4p-Del	Del_12q24.31	7.08e-06	1
1p-Del	1q-Del	7.08e-14	1
9q-Del	Del_6q15	7.09e-05	1
Del_6q15	Del_20p13	7.09e-05	1
4p-Del	9q-Del	7.12e-05	1
11p-Del	Del_1p36.13	7.12e-06	1
Del_18q23	Del_19p13.3	7.12e-06	1
9p-Del	Del_1p36.13	7.13e-06	1
Del_4p16.3	Del_10q26.3	7.15e-05	1
17p-Del	Del_7p22.3	7.18e-05	1
Del_4p16.3	Del_14q24.1	7.18e-09	1
Amp_3q26.32	Del_5q21.3	7.1e-06	1
Del_12q24.31	Del_17q21.31	7.1e-07	1
8p-Amp	8q-Amp	7.1e-59	1
TP53	5q-Del	7.23e-14	1
16p-Del	16q-Del	7.24e-18	1
Del_4q35.1	Del_13q14.2	7.27e-06	1
16p-Del	4p-Del	7.28e-05	1
11p-Del	17p-Del	7.2e-08	1
Del_1p36.13	Del_5q21.3	7.33e-06	1
Del_3p21.31	Del_4q35.1	7.39e-17	1
14q-Del	Del_4q35.1	7.3e-08	1
Del_3p21.31	Del_11q25	7.3e-17	1
9q-Del	Del_17p12	7.42e-07	1
Del_5q11.2	Del_5q21.3	7.42e-49	1
Amp_12p13.33	Del_5q21.3	7.43e-11	1
Del_5q11.2	Del_8p23.2	7.44e-09	1
Amp_19p13.12	Del_19p13.3	7.44e-11	1
9p-Del	Del_17q21.31	7.45e-09	1
14q-Del	Del_10q23.31	7.47e-07	1
17p-Del	Del_10q26.3	7.47e-08	1
6q-Del	Del_11q13.1	7.49e-06	1
4p-Del	Del_8p23.2	7.49e-08	1
11q-Del	13q-Del	7.51e-07	1
11p-Del	5q-Del	7.52e-05	1
Del_11p15.5	Del_18q23	7.52e-09	1
Del_1p22.1	Del_13q14.2	7.55e-08	1
Del_4p16.3	Del_17q21.31	7.61e-08	1
Del_5q11.2	Del_17q21.31	7.61e-08	1
11q-Del	Del_1p22.1	7.65e-13	1
14q-Del	4q-Del	7.66e-08	1
15q-Del	Del_17q21.31	7.6e-05	1
Del_17q21.31	Del_20p13	7.6e-05	1
16p-Del	Del_19p13.3	7.6e-07	1
4q-Del	9p-Del	7.72e-05	1
Del_9p23	Del_17p12	7.72e-17	1
PTPN22	Amp_20q13.2	7.73e-05	1
4q-Del	5q-Del	7.73e-07	1
6q-Del	Del_17p12	7.74e-08	1
Amp_1p22.3	Amp_1q44	7.81e-13	1
Del_3p21.31	Del_14q24.1	7.81e-16	1
17p-Del	Del_14q24.1	7.82e-09	1
13q-Del	Amp_8q24.21	7.83e-05	1
Amp_8q24.21	Amp_11q13.3	7.84e-05	1
Amp_8q24.21	Del_2q37.3	7.84e-07	1
Del_1p22.1	Del_4p16.3	7.87e-05	1
9p-Del	Del_17p12	7.87e-16	1
Amp_8q24.21	Del_8p23.2	7.87e-26	1
Del_7p22.3	Del_15q13.1	7.91e-06	1
Del_10q26.3	Del_18q23	7.91e-06	1
4p-Del	Del_17q21.31	7.97e-12	1
22q-Del	Del_9q21.11	7.98e-08	1
Amp_3q26.32	Del_4p16.3	7.98e-08	1
20q-Amp	Del_13q14.2	7.99e-06	1
11p-Del	9q-Del	8.02e-07	1
Amp_12q15	Amp_20q13.2	8.05e-07	1
22q-Del	6q-Del	8.09e-09	1
Del_1p22.1	Del_22q13.32	8.14e-05	1
17p-Del	8p-Del	8.16e-05	1
Del_12p13.1	Del_22q13.32	8.16e-09	1
Del_6q15	Del_16q24.3	8.17e-12	1
18p-Del	Del_13q14.2	8.19e-06	1
Del_10q26.3	Del_12q24.31	8.19e-06	1
ARID1A	SPEN	8.1e-05	1
Del_9p21.3	Del_10q26.3	8.1e-08	1
Amp_8p11.23	Del_11q23.3	8.21e-06	1
5q-Del	Del_10q26.3	8.22e-08	1
17q-Del	Del_8p23.2	8.23e-05	1
APC	MYH9	8.24e-05	1
Amp_3q26.32	Amp_13q34	8.26e-06	1
Del_15q13.1	Del_17p12	8.26e-07	1
1q-Amp	Amp_1q21.3	8.2e-94	1
CBFB	Amp_1q21.3	8.32e-05	1
Del_4q35.1	Del_15q13.1	8.32e-14	1
TP53	Del_4p16.3	8.35e-10	1
Del_17q21.31	Del_19q13.32	8.36e-05	1
13q-Del	9q-Del	8.36e-06	1
4q-Del	Del_3p21.31	8.36e-10	1
Del_4q35.1	Del_5q11.2	8.36e-15	1
Del_9p21.3	Del_14q24.1	8.39e-13	1
11p-Del	11q-Del	8.42e-55	1
11p-Del	Del_11q13.1	8.48e-18	1
Del_3p21.31	Del_11q23.3	8.48e-18	1
Amp_8q24.21	Amp_13q34	8.4e-05	1
16q-Del	Del_11q23.3	8.51e-16	1
18p-Del	Del_1p22.1	8.53e-07	1
Del_11q23.3	Del_19p13.3	8.54e-07	1
4q-Del	Del_15q13.1	8.54e-10	1
Del_8p23.2	Del_9p21.3	8.54e-12	1
Amp_11q14.1	Del_1p36.13	8.55e-05	1
Del_4p16.3	Del_10q23.31	8.56e-05	1
Del_18q23	Del_20p13	8.58e-05	1
Del_7p22.3	Del_11q25	8.5e-06	1
11q-Del	Del_13q14.2	8.5e-10	1
Del_11p15.5	Del_15q13.1	8.61e-09	1
Amp_20q13.2	Del_13q14.2	8.63e-05	1
15q-Del	Del_5q21.3	8.63e-11	1
Del_10q23.31	Del_13q14.2	8.65e-07	1
20p-Amp	Amp_8q24.21	8.65e-09	1
Del_4q35.1	Del_9p21.3	8.68e-05	1
Del_5q21.3	Del_14q24.1	8.68e-10	1
Del_10q26.3	Del_15q13.1	8.68e-10	1
11p-Del	13q-Del	8.69e-07	1
20q-Amp	13q-Del	8.6e-07	1
C17orf95	EYS	8.71e-05	1
Del_6q15	Del_9q21.11	8.75e-05	1
Del_9q21.11	Del_14q24.1	8.75e-13	1
Del_14q24.1	Del_20p13	8.76e-09	1
11p-Del	15q-Del	8.81e-05	1
Del_11q25	Del_17q21.31	8.81e-08	1
Amp_13q34	Del_5q21.3	8.84e-07	1
17p-Del	Del_1p22.1	8.84e-09	1
Del_10q23.31	Del_14q24.1	8.84e-13	1
RUFY1	TAF1L	8.87e-05	1
Del_9q34.2	Del_19p13.3	8.88e-07	1
9p-Del	Del_3p21.31	8.89e-12	1
Del_8p23.2	Del_13q14.2	8.91e-09	1
20q-Amp	Amp_17q23.1	8.92e-08	1
14q-Del	Del_3p21.31	8.92e-12	1
Amp_3p25.1	Amp_6q21	8.93e-05	1
4q-Del	Del_10q23.31	8.94e-05	1
8q-Amp	Amp_8q24.21	8.96e-98	1
22q-Del	Del_6q27	8.99e-06	1
Del_6q27	Del_17p12	8e-12	1
1q-Amp	Del_16q24.3	9.01e-06	1
Del_6q27	Del_8p23.2	9.02e-06	1
Del_8p23.2	Del_11q25	9.02e-13	1
14q-Del	Del_13q14.2	9.03e-11	1
Amp_12p13.33	Del_4q35.1	9.06e-06	1
Del_9q21.11	Del_15q13.1	9.06e-06	1
5q-Del	Del_11q25	9.07e-05	1
Del_11p15.5	Del_12q24.31	9.08e-07	1
16q-Del	Del_22q13.32	9.09e-08	1
9p-Del	Del_11q23.3	9.09e-14	1
13q-Del	Del_4p16.3	9.11e-05	1
13q-Del	Del_5q11.2	9.11e-05	1
14q-Del	Del_9p23	9.13e-10	1
13q-Del	4p-Del	9.17e-05	1
4q-Del	Del_1p36.13	9.17e-09	1
Amp_8q24.21	Del_19p13.3	9.17e-09	1
22q-Del	Del_14q24.1	9.19e-10	1
Del_14q24.1	Del_17p12	9.19e-13	1
Amp_6q21	Del_4p16.3	9.23e-05	1
Amp_20q13.2	Del_6q15	9.23e-05	1
Del_1p36.13	Del_11q25	9.24e-13	1
8q-Amp	Amp_8p11.21	9.24e-37	1
11q-Del	Del_14q24.1	9.28e-06	1
14q-Del	Del_5q11.2	9.2e-11	1
Del_11q23.3	Del_13q14.2	9.31e-20	1
Del_1p36.13	Del_15q13.1	9.32e-10	1
Del_6p25.3	Del_17p12	9.35e-06	1
13q-Del	Del_1p22.1	9.3e-07	1
Amp_14q21.1	Amp_20q13.2	9.44e-08	1
Del_10q23.31	Del_20p13	9.45e-05	1
Del_9p23	Del_9q21.11	9.46e-20	1
Del_4p16.3	Del_18q23	9.48e-08	1
Del_6q15	Del_14q24.1	9.4e-09	1
Amp_17q23.1	Del_9p21.3	9.52e-07	1
Amp_12p13.33	Amp_19p13.12	9.54e-05	1
18p-Del	Del_18q23	9.58e-43	1
5q-Del	Del_13q14.2	9.59e-05	1
13q-Del	Del_17q21.31	9.61e-08	1
9p-Del	Amp_20q13.2	9.62e-06	1
Del_9q34.2	Del_17q21.31	9.62e-09	1
Del_11q13.1	Del_13q14.2	9.65e-05	1
20p-Amp	Amp_20q13.2	9.68e-52	1
17q-Del	Del_12q23.1	9.69e-05	1
Del_8p23.2	Del_11q23.3	9.69e-14	1
Amp_6p23	Del_5q11.2	9.72e-05	1
15q-Del	22q-Del	9.75e-06	1
11q-Del	Del_6q27	9.7e-06	1
Del_13q14.2	Del_15q13.1	9.82e-08	1
8p-Amp	Amp_8q24.21	9.82e-29	1
18q-Del	Del_19p13.3	9.83e-06	1
14q-Del	4p-Del	9.83e-08	1
17q-Del	4p-Del	9.83e-08	1
13q-Del	15q-Del	9.83e-10	1
Del_9q34.2	Del_11p15.5	9.85e-06	1
1p-Del	Del_13q14.2	9.86e-05	1
17q-Del	Del_3p21.31	9.87e-09	1
Amp_8p11.23	Amp_11q13.3	9.87e-09	1
Del_3p21.31	Del_21q11.2	9.87e-09	1
14q-Del	17p-Del	9.8e-05	1
6q-Del	Del_6p25.3	9.92e-09	1
11p-Del	Amp_11q13.3	9.95e-07	1
15q-Del	Del_3p21.31	9.96e-07	1
9q-Del	Del_3p21.31	9.96e-07	1
Del_9p21.3	Del_20p13	9.96e-07	1
18q-Del	Del_17p12	9.98e-06	1
4q-Del	Del_20p13	9.99e-07	1
9q-Del	Del_19p13.3	9.9e-05	1
Del_19p13.3	Del_20p13	9.9e-05	1
Del_17p12	Del_18q23	9e-07	1
18p-Del	Del_17q21.31	9e-13	1
