gene1	gene2	pval	qval
ST3GAL6	C11orf30	0.000101	1
17p-Del	Del_5q12.1	0.000101	1
Del_10q25.2	Del_18q21.2	0.000101	1
FAM123B	ALPK2	0.000102	1
OR4D10	RBBP7	0.000102	1
NF1	PLAGL2	0.000102	1
20p-Del	Del_1p36.11	0.000102	1
Amp_8q24.21	Del_18q12.2	0.000102	1
Amp_20q12	Del_15q21.1	0.000102	1
Del_10q25.2	Del_15q21.1	0.000102	1
PRKDC	FBXW7	0.000103	1
NF1	DIP2B	0.000103	1
4q-Del	Del_5q21.2	0.000103	1
Amp_8q24.21	Del_17p12	0.000103	1
MLH1	PRKDC	0.000105	1
FMN2	CTNNB1	0.000105	1
20p-Del	Del_17p12	0.000105	1
17q-Amp	2q-Amp	0.000106	1
5q-Del	Del_8p22	0.000108	1
C11orf30	FKBP9	0.000109	1
GGT1	Amp_13q12.2	0.00011	1
SLC26A8	SETD2	0.00011	1
4p-Del	Amp_13q12.2	0.00011	1
Del_10q23.31	Del_15q21.1	0.00011	1
OR4D10	ROS1	0.000111	1
ROS1	PTGDR	0.000111	1
CDK12	BIRC3	0.000111	1
18p-Del	Del_5q12.1	0.000111	1
4p-Del	Del_1p36.11	0.000111	1
15q-Del	Amp_13q12.13	0.000112	1
5q-Del	Del_18q21.2	0.000112	1
18q-Del	Amp_8q24.21	0.000113	1
4p-Del	Del_17q24.3	0.000113	1
BCOR	ROS1	0.000114	1
20p-Amp	Amp_8q12.1	0.000114	1
4q-Del	Del_5q22.2	0.000114	1
SETD2	CREBBP	0.000115	1
13q-Amp	16p-Amp	0.000115	1
Del_4q35.1	Del_8q11.1	0.000115	1
GGT1	Amp_13q22.1	0.000116	1
PRRG1	NEXN	0.000116	1
CDK12	CREBBP	0.000117	1
Amp_17q12	Amp_20q12	0.000118	1
MGA	NEXN	0.00012	1
7q-Amp	Amp_8q24.21	0.00012	1
Amp_13q12.13	Del_15q15.2	0.00012	1
Del_4q22.1	Del_18p11.31	0.00012	1
Del_4q35.1	Del_15q11.2	0.00012	1
FMN2	NF1	0.000122	1
CDH1	PRKDC	0.000124	1
12p-Amp	8p-Amp	0.000124	1
ARID1A	PTEN	0.000126	1
13q-Amp	20p-Amp	0.000126	1
20p-Amp	8q-Amp	0.000126	1
8p-Del	Amp_20q11.21	0.000127	1
22q-Del	4q-Del	0.000128	1
TP53	7p-Amp	0.000129	1
MAPK6	BMPR2	0.000129	1
L1TD1	BMPR2	0.000129	1
7q-Amp	Amp_8p11.23	0.000129	1
MAPK6	ALPK2	0.00013	1
P2RY13	FKBP9	0.00013	1
ALPK2	C2orf29	0.00013	1
ALPK2	SLC26A8	0.00013	1
ALPK2	FKBP9	0.00013	1
PTCH1	CDK12	0.000131	1
RNF43	WNT1	0.000132	1
P2RY13	RB1	0.000132	1
13q-Amp	4q-Del	0.000132	1
Del_14q11.2	Del_22q13.32	0.000132	1
17p-Del	Del_21q11.2	0.000133	1
Del_6q26	Del_22q13.32	0.000133	1
Del_19p13.3	Del_22q13.32	0.000133	1
22q-Del	Del_4q22.1	0.000134	1
4q-Del	Del_15q15.2	0.000134	1
Del_18q12.2	Del_19p13.3	0.000134	1
22q-Del	Amp_13q12.2	0.000135	1
20p-Amp	Del_18q12.2	0.000136	1
Del_5q12.1	Del_8p22	0.000137	1
Del_1p36.11	Del_8p22	0.00014	1
SLC26A8	TOP2B	0.000142	1
TOP2B	FKBP9	0.000142	1
NF2	ZBTB20	0.000145	1
Del_4p16.2	Del_8q11.1	0.000145	1
Del_5q12.1	Del_8p23.2	0.000145	1
21q-Del	Del_17p12	0.000146	1
4p-Del	Del_5q12.1	0.000147	1
PRKDC	HLA-A	0.000148	1
14q-Del	4p-Del	0.000149	1
17p-Del	Del_5q22.2	0.000149	1
GGT1	Amp_13q12.13	0.00015	1
18p-Del	1p-Del	0.00015	1
BCOR	RB1	0.000151	1
Amp_6p21.1	Del_3q26.31	0.000151	1
Amp_17q12	Del_17p12	0.000151	1
RNF43	SLC26A8	0.000153	1
RNF43	FKBP9	0.000153	1
RNF43	ALDH1A3	0.000153	1
Del_10q21.1	Del_18q22.1	0.000153	1
ALG12	PRPS1	0.000154	1
Del_1p13.2	Del_4q35.1	0.000155	1
ALPK2	CREBBP	0.000157	1
NF1	MGA	0.000158	1
MGA	NLRC4	0.000158	1
4q-Del	Del_15q21.1	0.000159	1
MAPK6	CTNNB1	0.00016	1
PRRG1	BMPR2	0.00016	1
7p-Amp	Del_18p11.31	0.000161	1
Del_4p16.2	Del_10q21.1	0.000161	1
ARID1A	ALPK2	0.000164	1
Amp_13q12.13	Del_4p16.2	0.000164	1
Del_5q21.2	Del_15q15.2	0.000165	1
STARD3NL	ALPK2	0.000167	1
FBXW7	BMPR2	0.000167	1
ALPK2	GPATCH8	0.000167	1
14q-Del	4q-Del	0.000167	1
4q-Del	Del_21q11.2	0.000167	1
7p-Amp	Del_17p12	0.000169	1
Del_6q26	Del_8p22	0.000169	1
Del_8p22	Del_19p13.3	0.000169	1
PLAGL2	LARP4B	0.000171	1
4q-Del	Del_8q11.1	0.000171	1
Del_10q23.31	Del_18p11.31	0.000171	1
Del_17p12	Del_21q11.2	0.000172	1
14q-Del	Del_4q22.1	0.000173	1
20q-Amp	Amp_17q12	0.000175	1
14q-Del	8p-Del	0.000175	1
20p-Amp	7q-Amp	0.000176	1
CRIPAK	SMAD4	0.000177	1
PTCH1	ZNF486	0.00018	1
TP53	Amp_8q24.21	0.000182	1
Amp_8p11.23	Amp_20p11.21	0.000182	1
16p-Amp	18q-Del	0.000183	1
B2M	SLC26A8	0.000184	1
B2M	FKBP9	0.000184	1
OR4D10	MAPK6	0.000184	1
TOP2B	PTEN	0.000184	1
FKBP9	GMPS	0.000184	1
2p-Amp	Amp_11p15.5	0.000185	1
Del_1p36.11	Del_8p23.2	0.000186	1
MGA	SETD2	0.000188	1
20p-Amp	Del_18q22.1	0.000189	1
Amp_13q12.2	Del_15q21.1	0.000189	1
Del_1p36.11	Del_4q22.1	0.000189	1
PRKDC	ZBTB20	0.00019	1
PRKDC	ALPK2	0.00019	1
17p-Del	21q-Del	0.00019	1
BCL9	ST3GAL6	0.000191	1
ST3GAL6	NLRC4	0.000191	1
Amp_13q12.13	Del_4q22.1	0.000192	1
Amp_20q13.31	Del_4q35.1	0.000192	1
RNF43	GPATCH8	0.000193	1
NLRC4	BCORL1	0.000193	1
BCORL1	SLC12A6	0.000193	1
5q-Del	Del_19p13.3	0.000196	1
Amp_8p11.21	Amp_12p13.32	0.000196	1
FMN2	ATM	0.000197	1
RNF43	FAM9A	0.000203	1
16q-Amp	18p-Del	0.000208	1
17q-Amp	Amp_8q12.1	0.000208	1
NF2	BMPR2	0.00021	1
17p-Del	Del_1p13.2	0.00021	1
Del_12p13.1	Del_14q31.1	0.00021	1
7p-Amp	8p-Amp	0.000211	1
PTEN	SLC12A6	0.000212	1
Del_4q35.1	Del_5q12.1	0.000212	1
15q-Del	20p-Del	0.000215	1
17p-Del	Del_10q25.2	0.000215	1
12p-Amp	7q-Amp	0.000217	1
C11orf30	DIP2B	0.000219	1
C11orf30	LARP4B	0.000219	1
4p-Del	Amp_13q12.13	0.000219	1
Amp_13q12.2	Del_22q13.32	0.000222	1
MGA	ST3GAL6	0.000223	1
17q-Amp	Del_17p12	0.000227	1
EGR1	PLAGL2	0.000229	1
Del_4q35.1	Del_17q24.3	0.000231	1
BCL9	L1TD1	0.000232	1
BCL9	FKBP9	0.000232	1
FKBP9	SLC12A6	0.000232	1
18q-Del	Del_1p33	0.000234	1
Amp_13q12.2	Del_4q22.1	0.000234	1
MGA	PTCH1	0.000235	1
16q-Amp	Amp_20p11.21	0.000236	1
RBPJ	SETD2	0.000238	1
ALPK2	CTNNB1	0.00024	1
Amp_20q11.21	Del_21q11.2	0.00024	1
Del_4q35.1	Del_5q21.2	0.000243	1
MLH1	NF2	0.000246	1
ARID1A	CDK12	0.000249	1
RB1	KDM6A	0.000252	1
BMPR2	GPATCH8	0.000253	1
SLC26A8	HLA-A	0.000254	1
FKBP9	HLA-A	0.000254	1
Amp_20q13.31	Del_15q21.1	0.000254	1
MGA	CREBBP	0.000255	1
Amp_8q24.21	Amp_12p13.32	0.000255	1
RNF43	FMN2	0.000256	1
14q-Del	Del_1p33	0.000259	1
20p-Del	Amp_20q11.21	0.00026	1
8p-Del	Del_14q31.1	0.00026	1
Del_1p33	Del_14q31.1	0.00026	1
SELPLG	PTEN	0.000261	1
PRKDC	MPHOSPH10	0.000261	1
7p-Amp	18q-Del	0.000261	1
NF1	NLRC4	0.000262	1
Del_10q23.31	Del_17p12	0.000264	1
16q-Amp	Amp_20q11.21	0.000269	1
16q-Amp	Del_18q22.1	0.000269	1
Del_17q24.3	Del_18q22.1	0.000269	1
ALPK2	PIK3R1	0.000272	1
7p-Amp	Del_18q12.2	0.000272	1
1p-Del	21q-Del	0.000274	1
1p-Del	22q-Del	0.000274	1
STARD3NL	NF2	0.000275	1
NF2	GPATCH8	0.000275	1
B2M	ASXL1	0.000276	1
ALPK2	GMPS	0.000276	1
4q-Del	Del_5q12.1	0.000277	1
ALPK2	NLRC4	0.000279	1
ALPK2	SLC12A6	0.000279	1
SLC12A6	CTNNB1	0.00028	1
PTEN	BMPR2	0.000281	1
PLAGL2	BMPR2	0.000285	1
ERBB2	PTEN	0.000287	1
18p-Del	Del_12p13.1	0.000287	1
WNT1	ROS1	0.000289	1
DDX26B	RB1	0.00029	1
Del_1p33	Del_4q22.1	0.00029	1
C2orf29	KDM6A	0.000291	1
22q-Del	Amp_13q12.13	0.000291	1
2p-Amp	Amp_17q12	0.000292	1
MLH1	ATM	0.000293	1
PRRG1	PTEN	0.000293	1
FBXW7	PTCH1	0.000298	1
IFT57	BCORL1	0.000298	1
IFT57	SLC12A6	0.000298	1
20p-Del	Del_18p11.31	0.000298	1
TP53	Amp_20p11.21	0.000303	1
Del_1p33	Del_15q11.2	0.000303	1
16q-Amp	Amp_13q22.1	0.000304	1
FAM123B	PIK3R1	0.000305	1
ZFP36L2	FAM9A	0.000305	1
MLH1	CREBBP	0.000305	1
Del_8q11.1	Del_18q12.2	0.000307	1
B2M	MAP4K3	0.000309	1
FBXW7	LARP4B	0.000309	1
5q-Del	Del_8p23.2	0.000309	1
Amp_8p11.21	Del_18q21.2	0.00031	1
4p-Del	Del_5q21.2	0.000315	1
ALPK2	CDK12	0.000317	1
22q-Del	Del_4q35.1	0.000317	1
Amp_17q24.1	Del_18p11.31	0.000318	1
BCL9	NEXN	0.000319	1
16q-Amp	Del_18q21.2	0.000319	1
Del_1p36.11	Del_10q21.1	0.000319	1
14q-Del	Del_1p13.2	0.000321	1
PRKDC	NLRC4	0.000323	1
PRKDC	BCORL1	0.000323	1
RBBP7	NEXN	0.000331	1
RNF43	NLRC4	0.000333	1
Amp_5q22.3	Amp_20p11.21	0.000334	1
PRKDC	GPATCH8	0.000342	1
ARID1A	SLC26A8	0.000344	1
ARID1A	L1TD1	0.000344	1
RNF43	RB1	0.000345	1
18p-Del	Del_1p33	0.000346	1
NF1	SETD2	0.000348	1
P2RY13	C11orf30	0.000349	1
C11orf30	GPATCH8	0.000349	1
RNF43	MAP4K3	0.000353	1
2p-Amp	8q-Amp	0.000353	1
18p-Del	Del_19p13.3	0.000355	1
Del_4q35.1	Del_7q31.1	0.000355	1
RB1	FKBP9	0.00036	1
CDH1	BCOR	0.000364	1
Amp_13q12.2	Del_15q22.33	0.000365	1
Del_1p36.11	Del_8q11.1	0.000366	1
BCORL1	ATM	0.000372	1
SLC12A6	ATM	0.000372	1
16q-Amp	Amp_20q12	0.000372	1
7q-Amp	Del_18q22.1	0.000372	1
4q-Del	Amp_13q22.1	0.000373	1
IFT57	FYN	0.000374	1
RNF43	EGR1	0.000375	1
PLEKHF2	CTNNB1	0.000375	1
18q-Del	Del_5q12.1	0.000377	1
Del_4p16.2	Del_16p13.3	0.000377	1
16p-Amp	Amp_20p11.21	0.000378	1
2p-Amp	Amp_8p11.23	0.000379	1
MGA	C11orf30	0.00038	1
WNT1	LARP4B	0.000381	1
ALG12	LARP4B	0.000381	1
NF2	SETD2	0.000383	1
MGA	IQCD	0.000387	1
22q-Del	4p-Del	0.000387	1
21q-Del	Del_15q22.33	0.000388	1
21q-Del	Del_15q11.2	0.000389	1
MAPK6	CREBBP	0.000391	1
EGR1	LARP4B	0.000392	1
Del_4q22.1	Del_5q21.2	0.000394	1
18q-Del	Del_6q26	0.000396	1
14q-Del	Del_12p13.1	0.000397	1
NF1	SMAD4	0.000399	1
8p-Del	Amp_20q13.31	0.000399	1
BCOR	BMPR2	0.000401	1
ARID1A	BCL9	0.000402	1
ARID1A	SLC12A6	0.000402	1
16q-Amp	7q-Amp	0.000402	1
4q-Del	Del_10q21.1	0.000402	1
NF1	RSPH3	0.000403	1
Del_8q11.1	Del_15q15.2	0.000407	1
Del_10q25.2	Del_18q12.2	0.000408	1
BCOR	NLRC4	0.000409	1
EGR1	PRKDC	0.000412	1
BIRC3	ATM	0.000412	1
BCOR	MGA	0.000413	1
PTCH1	ROS1	0.000415	1
12p-Amp	7p-Amp	0.000421	1
7q-Amp	Del_8p22	0.000423	1
Amp_13q22.1	Amp_17q12	0.000428	1
BCL9	ZBTB20	0.00043	1
BCL9	MAP4K3	0.00043	1
20p-Del	Amp_20q12	0.000433	1
ALPK2	RBBP7	0.000435	1
Amp_20q13.31	Del_21q11.2	0.000436	1
Del_1p13.2	Del_15q11.2	0.000437	1
MGA	PTGDR	0.000438	1
Del_4p16.2	Del_19p13.3	0.000438	1
RPTN	SMAD4	0.000441	1
2p-Amp	8p-Amp	0.000442	1
2q-Amp	Amp_12p13.32	0.000446	1
Del_1p13.2	Del_6q26	0.000447	1
ST3GAL6	RBBP7	0.000448	1
PLEKHF2	HLA-A	0.000448	1
DDX26B	ATM	0.000452	1
PRRG1	RB1	0.000453	1
MAPK6	ALDH1A3	0.000454	1
L1TD1	ALDH1A3	0.000454	1
CDH1	NLRC4	0.000455	1
MLH1	MVK	0.000456	1
22q-Del	Amp_13q22.1	0.000457	1
TOP2B	CDK12	0.000458	1
16p-Amp	Amp_13q12.2	0.000459	1
PLAGL2	GPATCH8	0.000466	1
Del_1p36.11	Del_4p16.2	0.000477	1
STARD3NL	CTNNB1	0.00048	1
RNF43	SETD2	0.000482	1
PRKDC	CHUK	0.000482	1
Del_3p26.3	Del_22q13.32	0.000482	1
Del_8p22	Del_10q23.31	0.000483	1
ARID1A	LARP4B	0.000484	1
FAM9A	FKBP9	0.000486	1
PTCH1	SETD2	0.000491	1
ARID1A	C11orf30	0.000495	1
ALG12	CDK12	0.000495	1
ROS1	SLC26A8	0.000495	1
TOP2B	CTNNB1	0.000498	1
16p-Amp	Del_14q31.1	0.000499	1
RNF43	ZFP36L2	0.000501	1
RNF43	RBBP7	0.000501	1
NF1	ALPK2	0.000502	1
22q-Del	Del_19p13.3	0.000509	1
16q-Amp	Amp_20q13.31	0.000511	1
12p-Amp	Amp_1q31.1	0.000514	1
PRRG1	GPATCH8	0.000515	1
DCLK2	BIRC3	0.000515	1
2p-Amp	Amp_8q12.1	0.000519	1
Del_1p36.11	Del_4q35.1	0.000519	1
17p-Del	Del_10q23.31	0.000522	1
WNT1	FMN2	0.000524	1
RLIM	CTNNB1	0.000525	1
Del_4q22.1	Del_8q11.1	0.000525	1
ZBTB20	CTNNB1	0.000527	1
MGA	TOP2B	0.000531	1
C11orf30	SETD2	0.000531	1
Del_5q12.1	Del_19p13.3	0.000531	1
PTCH1	HLA-A	0.000532	1
14q-Del	Del_4p16.2	0.000535	1
Amp_20q12	Del_21q11.2	0.00054	1
DIP2B	FKBP9	0.000542	1
SLC26A8	LARP4B	0.000542	1
L1TD1	LARP4B	0.000542	1
ALDH1A3	LARP4B	0.000542	1
Del_3p14.2	Del_4q22.1	0.000542	1
8p-Del	Amp_8q12.1	0.000543	1
B2M	CREBBP	0.000545	1
17p-Del	20p-Del	0.000548	1
ROS1	DCLK2	0.000549	1
MGA	LARP4B	0.000551	1
PIK3R1	BCORL1	0.000551	1
20p-Del	Del_15q22.33	0.000555	1
HLA-A	BMPR2	0.000563	1
RB1	SETD2	0.000567	1
18p-Del	20p-Del	0.00057	1
IQCD	ALPK2	0.000571	1
ALPK2	IFT57	0.000571	1
PLAGL2	DDX26B	0.000571	1
NF1	FKBP9	0.000572	1
MPHOSPH10	SETD2	0.000572	1
Del_10q21.1	Del_18p11.31	0.000574	1
ARID1A	PIK3R1	0.000579	1
CDH1	FMN2	0.000585	1
PRKDC	PIK3R1	0.000587	1
MAPK6	NEXN	0.00059	1
ATXN3L	FKBP9	0.00059	1
L1TD1	NEXN	0.00059	1
Del_10q25.2	Del_15q11.2	0.000591	1
Amp_8p11.23	Del_8p23.2	0.000595	1
17q-Amp	7p-Amp	0.000603	1
PRKDC	RBPJ	0.000606	1
7q-Amp	Amp_17q12	0.000606	1
Del_10q23.31	Del_15q11.2	0.000606	1
DIP2B	IFT57	0.00061	1
Del_3p26.3	Del_18q22.1	0.000614	1
BCL9	PTCH1	0.000618	1
PTCH1	BCORL1	0.000618	1
PTCH1	SLC12A6	0.000618	1
14q-Del	Del_3p26.3	0.000619	1
CDH1	BMPR2	0.000622	1
CHUK	ASXL1	0.000624	1
8p-Del	Amp_13q12.2	0.000625	1
MGA	FKBP9	0.000627	1
16p-Amp	Del_18q22.1	0.000641	1
15q-Del	Del_4q35.1	0.000642	1
WNT1	MVK	0.000645	1
FYN	SLC12A6	0.000646	1
BCORL1	GPATCH8	0.000646	1
17q-Amp	20q-Amp	0.000646	1
20q-Amp	Amp_5q22.3	0.000646	1
20q-Amp	Del_4q35.1	0.000646	1
Amp_13q12.13	Del_12p13.1	0.00065	1
CDH1	ATXN3L	0.000655	1
Amp_13q22.1	Del_22q13.32	0.00066	1
PIK3R1	CDK12	0.000665	1
PRPS1	ATM	0.000668	1
16p-Amp	Amp_13q12.13	0.000671	1
NF1	PRRG1	0.000672	1
CHUK	HLA-A	0.000674	1
MVK	RBPJ	0.000674	1
PRRG1	RBPJ	0.000674	1
Del_2p12	Del_8q11.1	0.00069	1
CHUK	RB1	0.000691	1
ALPK2	PTCH1	0.000692	1
MAPK6	FBXW7	0.000699	1
GGT1	13q-Amp	0.000702	1
FMN2	MVK	0.000705	1
20p-Del	Amp_20q13.31	0.000709	1
ST3GAL6	L1TD1	0.00071	1
ARID1A	MVK	0.000711	1
8q-Amp	Del_18q21.2	0.000712	1
ARID1A	PLAGL2	0.000716	1
Del_6q26	Del_18q12.2	0.000718	1
ATM	KDM6A	0.00072	1
ST3GAL6	BMPR2	0.000728	1
12p-Amp	1q-Amp	0.000729	1
Del_4q22.1	Del_5q22.2	0.000729	1
16q-Amp	7p-Amp	0.000738	1
CDH1	RPTN	0.000739	1
SOX9	PCBP1	0.00075	1
PIK3R1	RBBP7	0.00075	1
20q-Amp	Del_15q15.2	0.000751	1
Del_4q35.1	Del_15q22.33	0.000753	1
ZBTB20	ALDH1A3	0.000755	1
L1TD1	MAP4K3	0.000755	1
RNF43	MPHOSPH10	0.000759	1
CDH1	PLAGL2	0.00076	1
16p-Amp	Del_18q21.2	0.000764	1
Amp_13q22.1	Del_4p16.2	0.000764	1
8q-Amp	5q-Del	0.000765	1
Amp_2q33.1	Amp_11p15.5	0.000773	1
ASXL1	ROS1	0.000774	1
ACVR1B	NR1H3	0.000778	1
Amp_8q12.1	Amp_12p13.32	0.000783	1
17q-Amp	Amp_20q11.21	0.000786	1
SLC26A8	CDK12	0.000787	1
L1TD1	CDK12	0.000787	1
Del_5q22.2	Del_15q11.2	0.000789	1
Del_8p22	Del_14q11.2	0.00079	1
2q-Amp	Amp_17q24.1	0.000793	1
ASXL1	RB1	0.000797	1
6p-Amp	7q-Amp	0.000803	1
ARID1A	MGA	0.000814	1
MGA	TPRKB	0.000818	1
8q-Amp	18q-Del	0.000818	1
NF2	RPTN	0.000821	1
NF2	RBBP7	0.000821	1
PLAGL2	MPHOSPH10	0.000824	1
Amp_13q12.13	Del_15q22.33	0.000824	1
RBBP7	TOP2B	0.000833	1
Amp_17q12	Amp_20p11.21	0.000834	1
Amp_17q12	Amp_20q13.31	0.000834	1
8q-Amp	Del_18q12.2	0.00084	1
TP53	RB1	0.000848	1
Del_5q12.1	Del_18q12.2	0.00085	1
Del_10q21.1	Del_18q21.2	0.000851	1
Del_12p13.1	Del_18p11.31	0.000852	1
8q-Amp	Del_18q22.1	0.000855	1
STARD3NL	PTCH1	0.000862	1
Amp_13q22.1	Del_15q15.2	0.000862	1
Amp_8p11.21	Amp_13q22.1	0.000869	1
4p-Del	Del_10q21.1	0.000871	1
18q-Del	Del_17q24.3	0.000872	1
20q-Amp	Amp_11p15.5	0.000875	1
Del_1p33	Del_15q21.1	0.000879	1
Del_1p33	Del_17p12	0.000879	1
PIK3R1	CTNNB1	0.00088	1
Del_5q12.1	Del_18q22.1	0.000888	1
ROS1	GMPS	0.00089	1
FMN2	KDM6A	0.000891	1
Amp_8p11.21	Del_18q22.1	0.000895	1
CHUK	ATM	0.000901	1
P2RY13	DDX26B	0.000901	1
P2RY13	GMPS	0.000901	1
NR1H3	DDX26B	0.000901	1
DDX26B	GPATCH8	0.000901	1
C11orf30	MPHOSPH10	0.000903	1
1p-Del	Del_3p26.3	0.000903	1
NLRC4	GMPS	0.000904	1
DDX26B	SLC12A6	0.000904	1
PRRG1	LARP4B	0.000907	1
9p-Amp	Amp_10q22.3	0.000907	1
HLA-A	CREBBP	0.000913	1
Del_8q11.1	Del_15q22.33	0.000913	1
FAM9A	ATM	0.000914	1
Del_1p33	Del_8q11.1	0.000915	1
B2M	CTNNB1	0.000921	1
OR4D10	CTNNB1	0.000921	1
ARID1A	PRKDC	0.000925	1
MGA	RB1	0.000926	1
MVK	ALPK2	0.000926	1
Amp_12p13.32	Del_16p13.3	0.000929	1
SELPLG	CTNNB1	0.000931	1
RB1	FYN	0.000934	1
PIK3R1	RB1	0.000937	1
Del_5q22.2	Del_18p11.31	0.00095	1
Amp_8q12.1	Amp_17q12	0.000952	1
TOP2B	SLC12A6	0.000954	1
Del_10q21.1	Del_18q12.2	0.000959	1
Amp_8p11.21	Amp_13q12.13	0.000963	1
ARID1A	ZBTB20	0.000967	1
21q-Del	Del_1p13.2	0.000968	1
ASXL1	SLC26A8	0.00097	1
APC	Amp_13q12.2	0.000971	1
STARD3NL	PTEN	0.000973	1
CDK12	ATM	0.000977	1
MAP4K3	NEXN	0.000978	1
STARD3NL	MGA	0.000982	1
MGA	DCLK2	0.000982	1
12p-Amp	16q-Amp	0.000982	1
MGA	BCL9	0.000983	1
FAM123B	ROS1	0.000985	1
TPRKB	PTEN	0.000985	1
PTCH1	KDM6A	0.000985	1
MAP4K3	ATM	0.000986	1
PTCH1	MPHOSPH10	0.00099	1
ZBTB20	DIP2B	0.000991	1
ZBTB20	LARP4B	0.000991	1
21q-Del	22q-Del	0.001	1
TP53	Amp_13q22.1	0.00101	1
PTEN	CDK12	0.00101	1
Del_8q11.1	Del_22q13.32	0.00101	1
MLH1	SMAD4	0.00102	1
RB1	LARP4B	0.00102	1
15q-Del	Del_1p13.2	0.00102	1
Del_4q35.1	Del_10q23.31	0.00102	1
TPRKB	RB1	0.00103	1
16q-Amp	Del_18p11.31	0.00103	1
NF1	NEXN	0.00104	1
4p-Del	5q-Del	0.00104	1
5q-Del	Amp_8p11.21	0.00104	1
RNF43	PLAGL2	0.00105	1
PLAGL2	ATM	0.00105	1
ROS1	PTEN	0.00105	1
18p-Del	Del_10q21.1	0.00105	1
Del_1p36.11	Del_16p13.3	0.00105	1
C2orf29	ATM	0.00106	1
ALDH1A3	ATM	0.00106	1
BCOR	DIP2B	0.00107	1
NF2	DIP2B	0.00107	1
NF2	LARP4B	0.00107	1
ST3GAL6	MAP4K3	0.00107	1
Amp_16p11.2	Amp_20p11.21	0.00107	1
Del_3p14.2	Del_4q35.1	0.00108	1
RNF43	L1TD1	0.00111	1
FMN2	PTCH1	0.00111	1
SLC26A8	BMPR2	0.00111	1
DCLK2	ATM	0.00111	1
FKBP9	BMPR2	0.00111	1
Amp_13q12.2	Del_1p13.2	0.00111	1
NF1	CHUK	0.00112	1
BMPR2	ZNF486	0.00112	1
17q-Amp	Amp_8p11.23	0.00112	1
Amp_16p11.2	Amp_20q13.31	0.00112	1
ARID1A	CTNNB1	0.00113	1
PIK3R1	MPHOSPH10	0.00113	1
Amp_13q12.13	Del_15q21.1	0.00113	1
DIP2B	ATM	0.00114	1
17p-Del	Del_10q21.1	0.00114	1
18p-Del	Del_10q25.2	0.00114	1
Amp_2q33.1	Del_2p12	0.00114	1
17q-Amp	Amp_20q12	0.00115	1
20q-Amp	Del_21q11.2	0.00115	1
15q-Del	Amp_13q22.1	0.00115	1
Amp_5q22.3	Amp_20q12	0.00115	1
Amp_11p15.5	Amp_20q11.21	0.00115	1
NF2	PRRG1	0.00116	1
P2RY13	HLA-A	0.00116	1
RBBP7	FYN	0.00116	1
ROS1	BCORL1	0.00117	1
ROS1	SLC12A6	0.00117	1
BMPR2	BCORL1	0.00117	1
Amp_8p11.21	Del_18q12.2	0.00117	1
B2M	DDX26B	0.00118	1
WNT1	HLA-A	0.00118	1
12p-Amp	Amp_8q24.21	0.00118	1
Del_5q12.1	Del_18q21.2	0.00118	1
MAPK6	C11orf30	0.00119	1
CHUK	SLC26A8	0.00119	1
CHUK	ALDH1A3	0.00119	1
Del_3p26.3	Del_16p13.3	0.00119	1
Del_10q23.31	Del_15q22.33	0.00119	1
7q-Amp	17p-Del	0.0012	1
Del_1p13.2	Del_21q11.2	0.0012	1
NF2	NLRC4	0.00121	1
16p-Amp	Amp_20q11.21	0.00121	1
SOX9	FBXW7	0.00123	1
BCL9	HLA-A	0.00123	1
NLRC4	RBBP7	0.00123	1
RBBP7	SLC12A6	0.00123	1
17q-Amp	Amp_2q33.1	0.00123	1
21q-Del	Del_8q11.1	0.00123	1
Del_4q35.1	Del_10q25.2	0.00124	1
Del_8q11.1	Del_21q11.2	0.00124	1
ZBTB20	MAP4K3	0.00125	1
LARP4B	PRPS1	0.00125	1
MGA	ZBTB20	0.00126	1
16q-Amp	6p-Amp	0.00126	1
Amp_13q12.13	Del_22q13.32	0.00127	1
FAM123B	SETD2	0.00128	1
MVK	CREBBP	0.00128	1
2q-Amp	8q-Amp	0.00128	1
20p-Del	22q-Del	0.00129	1
P2RY13	LARP4B	0.0013	1
PLEKHF2	SMAD4	0.0013	1
DIP2B	FYN	0.0013	1
LARP4B	GPATCH8	0.0013	1
16p-Amp	Del_18p11.31	0.0013	1
Del_3p26.3	Del_18q12.2	0.0013	1
ARID1A	STARD3NL	0.00131	1
1p-Del	Del_4q35.1	0.00131	1
Del_4q22.1	Del_16p13.3	0.00131	1
MLH1	LARP4B	0.00132	1
TPRKB	KDM6A	0.00132	1
7q-Amp	Del_18q21.2	0.00133	1
7p-Amp	Amp_17q12	0.00134	1
SETD2	CDK12	0.00135	1
Del_8p22	Del_16p13.3	0.00135	1
CHUK	SMAD4	0.00136	1
MVK	SLC26A8	0.00136	1
L1TD1	BIRC3	0.00136	1
SETD2	SLC12A6	0.00136	1
ARID1A	ST3GAL6	0.00137	1
STARD3NL	NF1	0.00137	1
8p-Amp	Amp_12p13.32	0.00137	1
18q-Del	Amp_8p11.21	0.00137	1
RB1	BMPR2	0.00138	1
17q-Amp	Amp_8q24.21	0.00138	1
FAM123B	GMPS	0.00139	1
PRKDC	LARP4B	0.0014	1
PRKDC	BIRC3	0.0014	1
MGA	GRB2	0.0014	1
Del_17q24.3	Del_22q13.32	0.0014	1
NF1	TPRKB	0.00141	1
8p-Del	Del_14q11.2	0.00141	1
CDH1	STARD3NL	0.00142	1
CDH1	P2RY13	0.00142	1
4p-Del	Del_5q22.2	0.00142	1
P2RY13	ALPK2	0.00143	1
ALPK2	FYN	0.00143	1
Del_10q25.2	Del_15q22.33	0.00143	1
MAPK6	TOP2B	0.00146	1
MPHOSPH10	GPATCH8	0.00146	1
ARID1A	SETD2	0.00147	1
Del_4q35.1	Del_10q21.1	0.00148	1
ZBTB20	ZNF486	0.0015	1
ARID1A	SOX9	0.00151	1
FMN2	TOP2B	0.00151	1
OR4D10	HLA-A	0.00151	1
NLRC4	SLC12A6	0.00151	1
DDX26B	HLA-A	0.00151	1
7q-Amp	Del_18q12.2	0.00152	1
17q-Amp	Del_2p12	0.00153	1
Del_3p26.3	Del_3q26.31	0.00153	1
Del_10q21.1	Del_15q15.2	0.00153	1
13q-Amp	Del_15q11.2	0.00154	1
7q-Amp	Amp_16p11.2	0.00154	1
Amp_8p11.21	Amp_13q12.2	0.00154	1
Del_2q22.1	Del_4q35.1	0.00155	1
Del_15q11.2	Del_17q24.3	0.00155	1
Del_4p16.2	Del_10q23.31	0.00157	1
BCL9	ALPK2	0.00159	1
ALPK2	BCORL1	0.00159	1
ASXL1	CDK12	0.0016	1
DIP2B	CTNNB1	0.0016	1
RNF43	NR1H3	0.00161	1
RNF43	FYN	0.00161	1
PRKDC	RLIM	0.00161	1
CREBBP	CTNNB1	0.00161	1
CDH1	FBXW7	0.00162	1
BCOR	CDK12	0.00162	1
Del_4q35.1	Del_5q22.2	0.00162	1
OR4D10	PTCH1	0.00163	1
RPTN	CTNNB1	0.00164	1
BCL9	RLIM	0.00164	1
Del_17q24.3	Del_18q12.2	0.00164	1
SELPLG	PIK3R1	0.00165	1
PIK3R1	SLC26A8	0.00165	1
1q-Amp	Amp_12p13.32	0.00165	1
8p-Del	Amp_13q12.13	0.00165	1
PIK3R1	CREBBP	0.00166	1
Del_8q11.1	Del_17p12	0.00166	1
16p-Amp	Amp_20q12	0.00167	1
17q-Amp	Amp_20q13.31	0.00167	1
Amp_5q22.3	Amp_20q13.31	0.00167	1
Amp_8q24.21	Amp_17q12	0.00167	1
ZBTB20	SETD2	0.00168	1
RSPH3	CREBBP	0.00168	1
Del_4q22.1	Del_6q26	0.00171	1
FAM9A	BCL9	0.00172	1
FAM9A	SLC12A6	0.00172	1
BCL9	GRB2	0.00172	1
RSPH3	BCORL1	0.00172	1
Amp_16p11.2	Del_8p22	0.00172	1
Del_10q21.1	Del_15q21.1	0.00172	1
PTCH1	FKBP9	0.00173	1
PTCH1	ALDH1A3	0.00173	1
APC	PTCH1	0.00175	1
Amp_6p21.1	Del_2p12	0.00175	1
FMN2	NEXN	0.00176	1
FAM9A	EGR1	0.00176	1
12p-Amp	Amp_8p11.23	0.00176	1
7q-Amp	18p-Del	0.00176	1
15q-Del	Del_10q23.31	0.00176	1
5q-Del	Amp_13q22.1	0.00176	1
Amp_13q22.1	Amp_19p13.2	0.00176	1
Del_8p23.2	Del_10q23.31	0.00176	1
NR1H3	CDK12	0.00177	1
Amp_13q22.1	Del_4q22.1	0.00177	1
2q-Amp	Amp_8q12.1	0.00178	1
ARID1A	NLRC4	0.00179	1
ARID1A	BCORL1	0.00179	1
PTCH1	PLAGL2	0.00179	1
TP53	Amp_8q12.1	0.0018	1
FAM123B	SOX9	0.0018	1
18q-Del	Del_10q21.1	0.0018	1
Amp_6p21.1	Amp_8q12.1	0.0018	1
FAM123B	ZBTB20	0.00181	1
STARD3NL	L1TD1	0.00181	1
SELPLG	DCLK2	0.00181	1
OR4D10	LARP4B	0.00181	1
MAPK6	GPATCH8	0.00181	1
P2RY13	ALDH1A3	0.00181	1
L1TD1	FYN	0.00181	1
2q-Amp	Amp_8p11.23	0.00181	1
EGR1	TOP2B	0.00182	1
Del_4q35.1	Del_15q15.2	0.00182	1
5q-Del	Del_15q15.2	0.00184	1
GPATCH8	PRPS1	0.00185	1
16p-Amp	6p-Amp	0.00185	1
Del_1p13.2	Del_8q11.1	0.00186	1
ARID1A	C2orf29	0.00188	1
FMN2	DDX26B	0.0019	1
Del_1p33	Del_18p11.31	0.0019	1
NF2	C11orf30	0.00191	1
BMPR2	CTNNB1	0.00191	1
Amp_20q12	Del_4q35.1	0.00191	1
18p-Del	Del_17q24.3	0.00192	1
8p-Del	Del_10q23.31	0.00192	1
Amp_8p11.21	Amp_20p11.21	0.00192	1
FAM9A	ALPK2	0.00193	1
ZBTB20	ALPK2	0.00193	1
ALPK2	MAP4K3	0.00193	1
2p-Amp	Amp_8p11.21	0.00193	1
6p-Amp	Amp_8p11.21	0.00193	1
22q-Del	Del_3p26.3	0.00195	1
4q-Del	Del_19p13.3	0.00195	1
Amp_13q12.2	Del_12p13.1	0.00195	1
5q-Del	Del_4q22.1	0.00196	1
14q-Del	1p-Del	0.00197	1
Amp_11p15.5	Amp_20q12	0.00197	1
Amp_13q12.13	Del_1p13.2	0.00197	1
16p-Amp	18p-Del	0.00198	1
BMPR2	MAP4K3	0.002	1
1p-Del	4q-Del	0.002	1
Del_1p13.2	Del_3p26.3	0.002	1
FAM123B	SLC12A6	0.00201	1
Amp_11p15.5	Amp_17q24.1	0.00201	1
NF2	MAPK6	0.00202	1
PIK3R1	PTEN	0.00202	1
Del_4q35.1	Del_16p13.3	0.00202	1
ARID1A	CREBBP	0.00203	1
5q-Del	Del_15q21.1	0.00203	1
MVK	ZBTB20	0.00204	1
MVK	MAP4K3	0.00204	1
ZBTB20	PRRG1	0.00204	1
13q-Amp	22q-Del	0.00204	1
13q-Amp	Amp_19p13.2	0.00204	1
18p-Del	Amp_17q24.1	0.00204	1
CDH1	MAPK6	0.00206	1
CDH1	C2orf29	0.00206	1
Del_6q26	Del_15q15.2	0.00206	1
APC	NF1	0.00208	1
2q-Amp	Amp_17q12	0.00208	1
ZFP36L2	BCOR	0.00209	1
18q-Del	Amp_8q12.1	0.00209	1
Amp_13q22.1	Del_12p13.1	0.00209	1
Del_4p16.2	Del_14q11.2	0.0021	1
20p-Del	Del_15q15.2	0.00212	1
8p-Del	Del_22q13.32	0.00212	1
RNF43	NF1	0.00213	1
FMN2	SETD2	0.00213	1
OR4D10	ASXL1	0.00213	1
ALPK2	RBPJ	0.00213	1
CHUK	CREBBP	0.00214	1
C11orf30	CREBBP	0.00214	1
7p-Amp	Amp_16p11.2	0.00214	1
MAPK6	NLRC4	0.00215	1
BCL9	ALDH1A3	0.00215	1
NLRC4	SLC26A8	0.00215	1
NLRC4	L1TD1	0.00215	1
NLRC4	FKBP9	0.00215	1
C11orf30	ZNF486	0.00215	1
DIP2B	TOP2B	0.00215	1
SLC26A8	BCORL1	0.00215	1
TOP2B	LARP4B	0.00215	1
FKBP9	BCORL1	0.00215	1
7q-Amp	18q-Del	0.00217	1
Del_1p33	Del_4q35.1	0.00218	1
Del_4q35.1	Del_15q21.1	0.00218	1
Del_10q21.1	Del_15q11.2	0.00218	1
CDH1	LARP4B	0.00219	1
RNF43	IDH1	0.0022	1
Del_5q21.2	Del_8p23.2	0.0022	1
Del_8p23.2	Del_14q11.2	0.00221	1
APC	Amp_13q12.13	0.00222	1
CDH1	ASXL1	0.00222	1
8p-Del	Del_5q12.1	0.00222	1
APC	Amp_20q12	0.00223	1
C2orf29	CREBBP	0.00223	1
FKBP9	CREBBP	0.00223	1
Amp_2q33.1	Amp_8p11.23	0.00223	1
ARID1A	SMAD4	0.00224	1
ARID1A	B2M	0.00225	1
ARID1A	GMPS	0.00225	1
WNT1	IDH1	0.00225	1
20p-Amp	Amp_5q22.3	0.00225	1
GRB2	IFT57	0.00226	1
Amp_20q13.31	Del_4p16.2	0.00226	1
RNF43	NF2	0.00227	1
Amp_1q31.1	Amp_12p13.32	0.00227	1
MGA	PIK3R1	0.00228	1
16p-Amp	Amp_20q13.31	0.00228	1
21q-Del	Del_15q15.2	0.00228	1
ROS1	SETD2	0.00229	1
7p-Amp	Amp_12p13.32	0.0023	1
15q-Del	Del_17q24.3	0.0023	1
Amp_8q12.1	Del_18q12.2	0.00231	1
TP53	Amp_19p13.2	0.00232	1
MLH1	CDK12	0.00233	1
15q-Del	Del_10q25.2	0.00233	1
17p-Del	Del_3p26.3	0.00233	1
Del_4p16.2	Del_5q21.2	0.00233	1
18q-Del	Del_10q25.2	0.00234	1
SELPLG	OR4D10	0.00236	1
OR4D10	FKBP9	0.00236	1
SLC26A8	GMPS	0.00236	1
L1TD1	GMPS	0.00236	1
8q-Amp	Del_17p12	0.00236	1
NF1	BMPR2	0.00238	1
RNF43	GMPS	0.00239	1
ROS1	SMAD4	0.00239	1
7q-Amp	Del_17p12	0.00239	1
20p-Del	Del_15q21.1	0.00239	1
Amp_6p21.1	Del_22q13.32	0.00239	1
APC	Amp_20q11.21	0.00242	1
MPHOSPH10	HLA-A	0.00242	1
1p-Del	Del_8q11.1	0.00242	1
Del_3p26.3	Del_17p12	0.00243	1
CDH1	DDX26B	0.00244	1
DIP2B	RBBP7	0.00245	1
HLA-A	LARP4B	0.00245	1
B2M	CDK12	0.00246	1
DDX26B	CDK12	0.00246	1
MAPK6	PRKDC	0.00247	1
EGR1	SLC12A6	0.00249	1
MVK	ROS1	0.00249	1
ROS1	BIRC3	0.00249	1
MAP4K3	CTNNB1	0.00251	1
Del_1p33	Del_15q22.33	0.00251	1
PLAGL2	BCORL1	0.00253	1
PLAGL2	SLC12A6	0.00253	1
Del_4q22.1	Del_14q11.2	0.00253	1
GMPS	ATM	0.00256	1
SLC26A8	KDM6A	0.00257	1
20p-Del	Del_22q13.32	0.00259	1
Del_5q21.2	Del_8p22	0.00259	1
12p-Amp	Amp_8q12.1	0.00261	1
Del_8q11.1	Del_15q21.1	0.00261	1
Del_4q22.1	Del_17q24.3	0.00262	1
NF2	FBXW7	0.00263	1
BCOR	FAM9A	0.00264	1
ALG12	PLAGL2	0.00265	1
2q-Amp	Del_2p12	0.00265	1
TP53	20p-Amp	0.00266	1
PRRG1	ATM	0.00266	1
21q-Del	Del_15q21.1	0.00266	1
8p-Del	Del_8q11.1	0.00266	1
MLH1	ROS1	0.00267	1
22q-Del	Del_6q26	0.00267	1
MVK	PTCH1	0.00268	1
Del_15q11.2	Del_21q11.2	0.00268	1
HLA-A	SETD2	0.00271	1
Del_1p33	Del_15q15.2	0.00272	1
Del_4q35.1	Del_6q26	0.00272	1
Del_4q35.1	Del_19p13.3	0.00272	1
CDH1	RHOA	0.00274	1
13q-Amp	Del_15q15.2	0.00274	1
4q-Del	Del_16p13.3	0.00274	1
Del_10q25.2	Del_17p12	0.00274	1
Del_4q22.1	Del_7q31.1	0.00275	1
ATXN3L	NLRC4	0.00276	1
Del_10q21.1	Del_17p12	0.00277	1
7q-Amp	Del_18p11.31	0.00278	1
BCOR	SLC12A6	0.00279	1
MGA	DIP2B	0.00279	1
SELPLG	NF1	0.0028	1
MAPK6	NF1	0.0028	1
EGR1	CTNNB1	0.0028	1
NF1	SLC26A8	0.0028	1
ERBB2	RB1	0.0028	1
Del_4p16.2	Del_17q24.3	0.00281	1
20p-Amp	Del_17p12	0.00283	1
FMN2	PRKDC	0.00284	1
Amp_16p11.2	Del_8p23.2	0.00284	1
16q-Amp	20q-Amp	0.00285	1
Del_8q11.1	Del_14q31.1	0.00285	1
PTCH1	RBBP7	0.00286	1
2q-Amp	8p-Amp	0.00288	1
RNF43	CDH1	0.00289	1
FMN2	RPTN	0.0029	1
FMN2	BCL9	0.00291	1
FMN2	BCORL1	0.00291	1
Amp_8q24.21	Amp_17q24.1	0.00292	1
RLIM	PTEN	0.00293	1
16p-Amp	7p-Amp	0.00294	1
Amp_8q24.21	Amp_13q12.2	0.00294	1
Del_3p26.3	Del_21q11.2	0.00295	1
EGR1	IFT57	0.00296	1
MGA	MPHOSPH10	0.00296	1
Amp_13q22.1	Del_1p36.11	0.00296	1
C11orf30	RB1	0.00297	1
EGR1	CREBBP	0.00298	1
12p-Amp	2p-Amp	0.00299	1
5q-Del	Del_4q35.1	0.00299	1
MAPK6	RPTN	0.003	1
RBBP7	L1TD1	0.003	1
FAM9A	DIP2B	0.00301	1
FAM9A	LARP4B	0.00301	1
20p-Del	Del_15q11.2	0.00301	1
Amp_6p21.1	Del_3p26.3	0.00302	1
20q-Amp	Del_15q21.1	0.00303	1
ZFP36L2	ALPK2	0.00305	1
ALPK2	HLA-A	0.00305	1
ASXL1	RBBP7	0.00305	1
13q-Amp	Amp_17q12	0.00305	1
15q-Del	Del_10q21.1	0.00305	1
OR4D10	NF2	0.00306	1
EGR1	ALPK2	0.00307	1
ST3GAL6	ALPK2	0.00307	1
21q-Del	Del_14q31.1	0.00309	1
FMN2	PLAGL2	0.0031	1
RB1	NEXN	0.0031	1
15q-Del	Del_2p12	0.0031	1
1p-Del	Del_18p11.31	0.00311	1
Amp_10q22.3	Del_10q23.31	0.00316	1
NF1	GRB2	0.00318	1
16p-Amp	Del_8p23.2	0.00318	1
Del_5q21.2	Del_18p11.31	0.00319	1
7q-Amp	Amp_12p13.32	0.00321	1
16q-Amp	Amp_5q22.3	0.00323	1
22q-Del	Del_17q24.3	0.00323	1
17q-Amp	7q-Amp	0.00324	1
7q-Amp	Amp_5q22.3	0.00324	1
TP53	13q-Amp	0.00325	1
FBXW7	ALDH1A3	0.00326	1
RBPJ	BMPR2	0.00326	1
BMPR2	GMPS	0.00326	1
Del_1p13.2	Del_15q15.2	0.00326	1
Amp_17q24.1	Amp_20q11.21	0.00328	1
Amp_11p15.5	Amp_20q13.31	0.00329	1
GGT1	8q-Amp	0.0033	1
PTCH1	DIP2B	0.00331	1
HLA-A	CDK12	0.00331	1
8q-Amp	Amp_17q12	0.00333	1
OR4D10	PIK3R1	0.00334	1
PIK3R1	DDX26B	0.00334	1
PIK3R1	GMPS	0.00334	1
OR4D10	CREBBP	0.00335	1
NLRC4	LARP4B	0.00336	1
13q-Amp	4p-Del	0.00336	1
2q-Amp	7q-Amp	0.00336	1
Amp_16p11.2	Amp_20q12	0.00339	1
Del_3p26.3	Del_18q21.2	0.00339	1
Amp_20q12	Del_4p16.2	0.0034	1
4p-Del	Amp_13q22.1	0.00342	1
TXNDC2	PTEN	0.00343	1
PRRG1	TOP2B	0.00343	1
8q-Amp	Amp_2q33.1	0.00343	1
PTCH1	PRPS1	0.00344	1
Amp_13q22.1	Del_1p13.2	0.00344	1
NLRC4	PTEN	0.00345	1
IQCD	NLRC4	0.00346	1
BCORL1	ZNF486	0.00346	1
ZBTB20	NLRC4	0.00349	1
ZBTB20	BCORL1	0.00349	1
ZBTB20	SLC12A6	0.00349	1
ALPK2	C11orf30	0.00349	1
BCORL1	MAP4K3	0.00349	1
MAP4K3	GMPS	0.00349	1
2p-Amp	Del_2p12	0.00352	1
Del_10q25.2	Del_17q24.3	0.00353	1
2p-Amp	Amp_8q24.21	0.00355	1
6p-Amp	Amp_8q24.21	0.00355	1
17q-Amp	Del_18p11.31	0.00356	1
C11orf30	ATM	0.00358	1
BCOR	FKBP9	0.0036	1
22q-Del	Amp_11p15.5	0.00362	1
Del_5q21.2	Del_10q21.1	0.00362	1
GGT1	18q-Del	0.00363	1
15q-Del	Del_5q21.2	0.00363	1
Amp_8q24.21	Amp_13q22.1	0.00363	1
RB1	PRPS1	0.00364	1
RB1	PTGDR	0.00364	1
Del_17q24.3	Del_18p11.31	0.00364	1
ARID1A	HLA-A	0.00365	1
DIP2B	RB1	0.00365	1
PRKDC	DDX26B	0.00366	1
ATXN3L	RBBP7	0.00367	1
17p-Del	Del_8q11.1	0.00367	1
TXNDC2	C11orf30	0.00369	1
WNT1	ALG12	0.00369	1
7p-Amp	Amp_2q33.1	0.00369	1
Amp_6p21.1	Del_6p25.3	0.00369	1
Del_3p26.3	Del_6p25.3	0.00369	1
EGR1	BIRC3	0.00371	1
ST3GAL6	PRRG1	0.00371	1
Del_1p13.2	Del_14q11.2	0.00371	1
Del_1p13.2	Del_15q21.1	0.00371	1
NF1	CDK12	0.00372	1
22q-Del	5q-Del	0.00372	1
Del_1p33	Del_21q11.2	0.00373	1
Del_1p36.11	Del_12p13.1	0.00374	1
CDH1	TOP2B	0.00375	1
MLH1	SETD2	0.00375	1
SELPLG	RLIM	0.00376	1
FMN2	SMAD4	0.00378	1
LARP4B	ATM	0.00378	1
Del_5q21.2	Del_22q13.32	0.00378	1
SELPLG	PTGDR	0.00379	1
MAPK6	PTGDR	0.00379	1
P2RY13	ROS1	0.00379	1
ALDH1A3	PTGDR	0.00379	1
DIP2B	SETD2	0.0038	1
LARP4B	SETD2	0.0038	1
8p-Del	Del_19p13.3	0.0038	1
Del_5q22.2	Del_15q15.2	0.0038	1
C11orf30	DCLK2	0.00384	1
FAM9A	CDK12	0.00385	1
PTEN	SETD2	0.00386	1
15q-Del	Del_1p33	0.00386	1
GGT1	20q-Amp	0.00388	1
1p-Del	Del_17p12	0.00391	1
ZFP36L2	CDH1	0.00396	1
RNF43	C11orf30	0.00398	1
8q-Amp	Amp_6p21.1	0.00398	1
APC	Del_18q12.2	0.00399	1
Del_4q22.1	Del_12p13.1	0.004	1
2p-Amp	Del_12p13.1	0.00402	1
13q-Amp	Amp_8p11.21	0.00403	1
MAPK6	MGA	0.00404	1
12p-Amp	Del_16p13.3	0.00404	1
20p-Amp	Amp_11p15.5	0.00404	1
6p-Amp	8q-Amp	0.00406	1
LARP4B	KDM6A	0.00413	1
Del_1p36.11	Del_10q23.31	0.00413	1
Del_6q26	Del_21q11.2	0.00417	1
NF2	PLAGL2	0.00418	1
Del_2p12	Del_4q35.1	0.00418	1
IQCD	SETD2	0.00419	1
MAPK6	DIP2B	0.00421	1
DIP2B	SLC26A8	0.00421	1
Amp_8p11.23	Amp_12p13.32	0.00421	1
APC	Amp_13q22.1	0.00422	1
OR4D10	ERBB2	0.00424	1
B2M	FAM9A	0.00425	1
B2M	RSPH3	0.00425	1
FAM9A	DDX26B	0.00425	1
6p-Amp	7p-Amp	0.00425	1
Del_2p12	Del_10q21.1	0.00426	1
Amp_5q22.3	Amp_20q11.21	0.00428	1
MLH1	TOP2B	0.00431	1
NF1	BCL9	0.00431	1
ST3GAL6	LARP4B	0.00431	1
ARID1A	MLH1	0.00432	1
GGT1	Amp_20q11.21	0.00433	1
Amp_8q12.1	Del_18q21.2	0.00434	1
20q-Amp	1p-Del	0.00435	1
ZFP36L2	FBXW7	0.00437	1
MGA	CDK12	0.00437	1
PLEKHF2	PTCH1	0.00438	1
RBBP7	BMPR2	0.00438	1
ARID1A	PRRG1	0.00439	1
BMPR2	CDK12	0.00439	1
ALPK2	DIP2B	0.0044	1
ASXL1	DIP2B	0.0044	1
15q-Del	21q-Del	0.00441	1
21q-Del	Del_1p33	0.00441	1
GRB2	ROS1	0.00442	1
PLAGL2	CREBBP	0.00442	1
21q-Del	Amp_20q13.31	0.00442	1
Del_2p12	Del_15q22.33	0.00442	1
FAM123B	PRKDC	0.00443	1
NF1	RBBP7	0.00443	1
NF1	HLA-A	0.00443	1
1p-Del	Del_14q31.1	0.00443	1
ZFP36L2	ZBTB20	0.00444	1
RPTN	MAP4K3	0.00444	1
22q-Del	Del_5q12.1	0.00444	1
Del_5q22.2	Del_15q21.1	0.00444	1
13q-Amp	Del_4q22.1	0.00449	1
PLAGL2	PRPS1	0.0045	1
Del_6q26	Del_19p13.3	0.0045	1
NF1	C11orf30	0.00451	1
TXNDC2	P2RY13	0.00452	1
TXNDC2	GPATCH8	0.00452	1
ASXL1	SMAD4	0.00454	1
RLIM	SMAD4	0.00454	1
MPHOSPH10	SMAD4	0.00454	1
NF2	IFT57	0.00455	1
Amp_1q31.1	Amp_6p21.1	0.00456	1
Del_3p14.2	Del_16p13.3	0.00456	1
NF1	ATXN3L	0.00457	1
ASXL1	TOP2B	0.00457	1
ST3GAL6	DCLK2	0.00458	1
ST3GAL6	GPATCH8	0.00458	1
BCOR	ATXN3L	0.00459	1
RLIM	NEXN	0.00459	1
2p-Amp	Amp_6p21.1	0.00459	1
MLH1	ASXL1	0.0046	1
GGT1	15q-Del	0.0046	1
20p-Del	Del_4p16.2	0.00461	1
Del_15q22.33	Del_21q11.2	0.00461	1
ZFP36L2	NF2	0.00463	1
NF2	HLA-A	0.00463	1
MAPK6	SLC26A8	0.00465	1
SLC26A8	FKBP9	0.00465	1
L1TD1	FKBP9	0.00465	1
MVK	NLRC4	0.00466	1
MVK	SLC12A6	0.00466	1
BCL9	BIRC3	0.00466	1
PRRG1	SLC12A6	0.00466	1
L1TD1	ATM	0.00466	1
PLAGL2	CDK12	0.00468	1
1p-Del	Del_4q22.1	0.00469	1
FBXW7	TPRKB	0.00471	1
NF1	PRPS1	0.00474	1
MVK	IFT57	0.00474	1
PTCH1	RLIM	0.00474	1
PTCH1	GPATCH8	0.00475	1
NLRC4	CDK12	0.00475	1
SLC12A6	CDK12	0.00475	1
NLRC4	CTNNB1	0.00481	1
Del_15q22.33	Del_17q24.3	0.00481	1
CDH1	ZBTB20	0.00482	1
CDH1	IDH1	0.00482	1
13q-Amp	Amp_1q31.1	0.00482	1
GRB2	BMPR2	0.00484	1
DDX26B	CTNNB1	0.00488	1
Amp_8q12.1	Del_18q22.1	0.00491	1
IQCD	CREBBP	0.00492	1
IFT57	CREBBP	0.00492	1
18p-Del	Amp_17q12	0.00492	1
MGA	MVK	0.00494	1
MGA	BIRC3	0.00494	1
RNF43	PIK3R1	0.00495	1
FMN2	C11orf30	0.00495	1
Amp_20q11.21	Del_4p16.2	0.00495	1
C11orf30	DDX26B	0.00496	1
C11orf30	GMPS	0.00496	1
GGT1	Del_18q12.2	0.00497	1
7q-Amp	Amp_8p11.21	0.005	1
MLH1	NR1H3	0.00502	1
12p-Amp	Amp_8p11.21	0.00502	1
MGA	SLC12A6	0.00504	1
RNF43	DIP2B	0.00507	1
MLH1	WNT1	0.00507	1
RB1	GPATCH8	0.00508	1
ZBTB20	PTGDR	0.0051	1
RLIM	RB1	0.0051	1
MPHOSPH10	RB1	0.0051	1
Del_2q22.1	Del_8q11.1	0.0051	1
NF2	SLC12A6	0.00513	1
MAPK6	SETD2	0.00513	1
L1TD1	SETD2	0.00513	1
FKBP9	SETD2	0.00513	1
Amp_5q22.3	Amp_16p11.2	0.00517	1
4p-Del	Del_10q23.31	0.00519	1
PRKDC	MAP4K3	0.00521	1
BCOR	IQCD	0.00524	1
APC	Del_18q21.2	0.00526	1
BCL9	ATM	0.00526	1
Del_1p33	Del_3p26.3	0.00527	1
MAPK6	TPRKB	0.00528	1
TPRKB	FKBP9	0.00528	1
16p-Amp	Amp_5q22.3	0.0053	1
FMN2	ROS1	0.00531	1
6p-Amp	8p-Amp	0.00531	1
ARID1A	FAM123B	0.00534	1
BCL9	C11orf30	0.00535	1
FAM123B	ASXL1	0.00536	1
WNT1	ATM	0.00536	1
GGT1	Amp_20q12	0.00536	1
21q-Del	4p-Del	0.0054	1
Amp_13q22.1	Del_15q22.33	0.0054	1
17p-Del	Amp_20p11.21	0.00541	1
Del_5q12.1	Del_14q31.1	0.00541	1
8p-Amp	Amp_20p11.21	0.00543	1
TP53	SMAD4	0.00548	1
WNT1	RB1	0.00548	1
Amp_20q11.21	Del_4q35.1	0.00548	1
FAM123B	DCLK2	0.00549	1
17q-Amp	18p-Del	0.00549	1
Del_3p14.2	Del_7q31.1	0.00549	1
PRKDC	SMAD4	0.0055	1
Del_3p26.3	Del_4q22.1	0.0055	1
OR4D10	SMAD4	0.00551	1
ROS1	DDX26B	0.00553	1
B2M	EGR1	0.00555	1
OR4D10	ST3GAL6	0.00555	1
16p-Amp	Del_8p22	0.00555	1
6p-Amp	Amp_8q12.1	0.00555	1
FMN2	NF2	0.00557	1
5q-Del	Amp_8q12.1	0.0056	1
20q-Amp	Del_1p33	0.00561	1
5q-Del	Amp_8q24.21	0.00565	1
SLC26A8	NEXN	0.00566	1
Del_10q25.2	Del_18p11.31	0.00567	1
Del_14q31.1	Del_21q11.2	0.00567	1
MLH1	ATXN3L	0.0057	1
Amp_20q13.31	Del_1p33	0.0057	1
Amp_8q24.21	Amp_13q12.13	0.00573	1
ALPK2	ALDH1A3	0.00575	1
ASXL1	FKBP9	0.00575	1
RLIM	BMPR2	0.00576	1
MPHOSPH10	BMPR2	0.00576	1
BCOR	MAP4K3	0.00577	1
STARD3NL	ATM	0.00577	1
NF1	LARP4B	0.0058	1
NF2	ERBB2	0.00581	1
ERBB2	SMAD4	0.00582	1
Amp_8q12.1	Amp_13q22.1	0.00582	1
OR4D10	TOP2B	0.00583	1
DDX26B	TOP2B	0.00583	1
STARD3NL	RHOA	0.00584	1
IQCD	FYN	0.00584	1
Amp_13q22.1	Del_15q21.1	0.00584	1
RPTN	PTEN	0.00585	1
22q-Del	8p-Del	0.00589	1
MVK	PRRG1	0.00593	1
IFT57	LARP4B	0.00596	1
LARP4B	ZNF486	0.00596	1
NF1	FBXW7	0.00597	1
Del_10q21.1	Del_16q23.1	0.00598	1
BCOR	PTEN	0.00599	1
16q-Amp	Amp_12p13.32	0.00599	1
Del_4q35.1	Del_12p13.1	0.006	1
APC	13q-Amp	0.00602	1
Del_1p33	Del_10q21.1	0.00602	1
CDH1	CREBBP	0.00605	1
FMN2	PIK3R1	0.00605	1
BCOR	LARP4B	0.00606	1
PRRG1	SETD2	0.00606	1
4p-Del	Del_14q11.2	0.00606	1
FMN2	C2orf29	0.00607	1
FMN2	SLC26A8	0.00607	1
FMN2	FKBP9	0.00607	1
PIK3R1	ROS1	0.00608	1
STARD3NL	BCL9	0.00613	1
STARD3NL	NLRC4	0.00613	1
STARD3NL	BCORL1	0.00613	1
BCL9	GPATCH8	0.00613	1
P2RY13	BCORL1	0.00613	1
NLRC4	FYN	0.00613	1
NLRC4	GPATCH8	0.00613	1
PCBP1	SLC12A6	0.00613	1
GPATCH8	SLC12A6	0.00613	1
MLH1	ERBB2	0.00617	1
FKBP9	PTEN	0.00617	1
WNT1	PRPS1	0.00624	1
14q-Del	21q-Del	0.00626	1
22q-Del	Del_21q11.2	0.00626	1
TP53	22q-Del	0.00627	1
C11orf30	RBBP7	0.00628	1
Del_10q21.1	Del_15q22.33	0.00629	1
NF1	KDM6A	0.00632	1
21q-Del	Amp_20q12	0.00632	1
ZBTB20	PTEN	0.00633	1
PTEN	IDH1	0.00633	1
Amp_17q12	Del_18p11.31	0.00641	1
Del_3p26.3	Del_14q11.2	0.00641	1
2p-Amp	6p-Amp	0.00646	1
18q-Del	Del_8q11.1	0.00647	1
BCL9	TOP2B	0.0065	1
TOP2B	BCORL1	0.0065	1
FMN2	ALG12	0.00653	1
NF2	HIST1H1T	0.00654	1
BCL9	BMPR2	0.00654	1
13q-Amp	Amp_8q12.1	0.00656	1
8q-Amp	Amp_13q12.13	0.00659	1
Amp_17q24.1	Del_2p12	0.00661	1
GGT1	Amp_20q13.31	0.00662	1
TXNDC2	FMN2	0.00667	1
ALPK2	BIRC3	0.00669	1
FAM123B	ATM	0.00672	1
16p-Amp	7q-Amp	0.00673	1
Del_10q23.31	Del_17q24.3	0.00674	1
4q-Del	Del_14q11.2	0.00675	1
20p-Amp	14q-Del	0.0068	1
Del_2p12	Del_2q22.1	0.0068	1
ZBTB20	FKBP9	0.00681	1
C2orf29	IDH1	0.00681	1
SLC26A8	MAP4K3	0.00681	1
CTNNB1	KDM6A	0.00681	1
Amp_20p11.21	Del_15q11.2	0.00681	1
13q-Amp	Del_22q13.32	0.00682	1
21q-Del	Del_12p13.1	0.00683	1
ARID1A	DIP2B	0.00687	1
2q-Amp	Amp_8p11.21	0.00687	1
ATXN3L	NEXN	0.00688	1
Amp_19p13.2	Del_3q26.31	0.00688	1
16p-Amp	20q-Amp	0.00689	1
8q-Amp	Amp_17q24.1	0.00691	1
EGR1	ROS1	0.00692	1
MGA	FYN	0.00692	1
MGA	GPATCH8	0.00692	1
Amp_2q33.1	Amp_12p13.32	0.00694	1
GGT1	Del_15q22.33	0.00699	1
NF1	FYN	0.007	1
NF1	GPATCH8	0.007	1
16q-Amp	Del_18q12.2	0.007	1
13q-Amp	15q-Del	0.00702	1
Amp_16p11.2	Del_14q31.1	0.00702	1
FAM123B	ERBB2	0.00703	1
BCOR	PRRG1	0.00704	1
ALPK2	ASXL1	0.00706	1
GPATCH8	KDM6A	0.00706	1
ARID1A	P2RY13	0.00708	1
ARID1A	GPATCH8	0.00708	1
SELPLG	GRB2	0.00708	1
MAPK6	GRB2	0.00708	1
FAM9A	SLC26A8	0.00708	1
FAM9A	L1TD1	0.00708	1
FAM9A	ALDH1A3	0.00708	1
RSPH3	C2orf29	0.00708	1
RSPH3	FKBP9	0.00708	1
ZBTB20	HIST1H1T	0.00709	1
FMN2	PCBP1	0.0071	1
Amp_20q11.21	Del_5q12.1	0.0071	1
BCOR	ATM	0.00715	1
TPRKB	PTCH1	0.00716	1
7q-Amp	Del_15q22.33	0.0072	1
Amp_8q12.1	Amp_13q12.13	0.0072	1
APC	20q-Amp	0.00721	1
NF1	RLIM	0.00723	1
NF1	MPHOSPH10	0.00723	1
Amp_13q22.1	Del_21q11.2	0.00723	1
Del_12p13.1	Del_22q13.32	0.00725	1
Amp_8p11.23	Amp_13q12.13	0.00726	1
MLH1	OR4D10	0.00728	1
MLH1	DDX26B	0.00728	1
MVK	P2RY13	0.00729	1
MVK	GPATCH8	0.00729	1
6p-Amp	Amp_16p11.2	0.00734	1
16p-Amp	Del_19p13.3	0.00736	1
Del_6q26	Del_8q11.1	0.00736	1
Del_8q11.1	Del_19p13.3	0.00736	1
TP53	RPTN	0.00737	1
Del_4q22.1	Del_19p13.3	0.00739	1
Del_1p36.11	Del_6q26	0.00744	1
CDH1	BCL9	0.00745	1
PTCH1	C2orf29	0.00745	1
PTCH1	SLC26A8	0.00745	1
PIK3R1	TOP2B	0.00746	1
Del_2p12	Del_15q15.2	0.00746	1
BCL9	ASXL1	0.00748	1
Del_1p13.2	Del_5q12.1	0.0075	1
7p-Amp	Amp_17q24.1	0.00755	1
RHOA	CDK12	0.00758	1
PIK3R1	LARP4B	0.00758	1
CDK12	ZNF486	0.00758	1
8p-Amp	9p-Amp	0.00758	1
CDH1	DCLK2	0.00759	1
CDH1	GPATCH8	0.00759	1
CREBBP	KDM6A	0.00759	1
SMAD2	ROS1	0.0076	1
CRIPAK	PTCH1	0.00761	1
2p-Amp	7q-Amp	0.00761	1
ALPK2	NEXN	0.00763	1
PRRG1	CREBBP	0.00766	1
BIRC3	CREBBP	0.00766	1
FBXW7	ZNF486	0.0077	1
ACVR1B	TOP2B	0.00771	1
FBXW7	CREBBP	0.00771	1
Amp_16p11.2	Del_19p13.3	0.00771	1
13q-Amp	Del_12p13.1	0.00773	1
RBBP7	CTNNB1	0.00775	1
GGT1	Del_18q22.1	0.00776	1
TP53	8q-Amp	0.00778	1
17q-Amp	Amp_13q22.1	0.0078	1
Del_2p12	Del_15q21.1	0.00782	1
MGA	HIST1H1T	0.00785	1
EGR1	MPHOSPH10	0.00786	1
ST3GAL6	RLIM	0.00786	1
13q-Amp	Del_4p16.2	0.00786	1
OR4D10	BCL9	0.00787	1
BCL9	DDX26B	0.00787	1
PTCH1	DDX26B	0.00787	1
PTCH1	RBPJ	0.00787	1
NLRC4	DDX26B	0.00787	1
NLRC4	RBPJ	0.00787	1
RBPJ	SLC12A6	0.00787	1
SLC12A6	GMPS	0.00787	1
7p-Amp	Del_15q15.2	0.00788	1
4q-Del	Amp_6p21.1	0.0079	1
FAM123B	OR4D10	0.00794	1
FAM123B	RBPJ	0.00794	1
20q-Amp	Amp_17q24.1	0.00796	1
MVK	LARP4B	0.00798	1
LARP4B	BIRC3	0.00798	1
C2orf29	RB1	0.008	1
SLC26A8	RB1	0.008	1
13q-Amp	5q-Del	0.008	1
17q-Amp	Amp_11p15.5	0.008	1
SMAD4	ALDH1A3	0.00805	1
SMAD4	SETD2	0.00806	1
20p-Del	Del_14q11.2	0.00808	1
GGT1	PTEN	0.0081	1
GGT1	Amp_5q22.3	0.00811	1
PLEKHF2	PLAGL2	0.00811	1
SMAD2	L1TD1	0.00812	1
SMAD2	FKBP9	0.00812	1
Del_1p36.11	Del_15q11.2	0.00814	1
NF2	CHUK	0.00817	1
21q-Del	4q-Del	0.00817	1
Del_3p26.3	Del_4q35.1	0.00817	1
ATXN3L	GRB2	0.00822	1
GRB2	NEXN	0.00822	1
PRKDC	PRRG1	0.00825	1
TXNDC2	CTNNB1	0.00826	1
4p-Del	Amp_20q12	0.00827	1
FMN2	ALPK2	0.00828	1
Amp_13q22.1	Del_19p13.3	0.00829	1
RNF43	ASXL1	0.00832	1
SMAD2	DIP2B	0.00833	1
7q-Amp	Del_8p23.2	0.00836	1
APC	Amp_20q13.31	0.00838	1
ARID1A	FKBP9	0.00839	1
NEXN	ATM	0.00839	1
Del_1p36.11	Del_5q22.2	0.00839	1
PRKDC	KDM6A	0.0084	1
RBPJ	RB1	0.0084	1
ZFP36L2	IFT57	0.00845	1
IQCD	RBBP7	0.00845	1
IFT57	HLA-A	0.00845	1
RBBP7	ZNF486	0.00845	1
STARD3NL	SETD2	0.00846	1
20p-Amp	Amp_2q33.1	0.00846	1
RNF43	ATXN3L	0.00851	1
RNF43	NEXN	0.00851	1
Amp_11p15.5	Del_1p36.11	0.00853	1
ARID1A	EGR1	0.00856	1
8q-Amp	Amp_13q12.2	0.00858	1
Del_10q21.1	Del_17q24.3	0.00858	1
Amp_16p11.2	Amp_20q11.21	0.00859	1
Del_2p12	Del_15q11.2	0.0086	1
PRRG1	CTNNB1	0.00862	1
GGT1	Del_18q21.2	0.00863	1
22q-Del	Del_5q21.2	0.00864	1
CDH1	MGA	0.0087	1
20p-Del	Del_8p22	0.00876	1
21q-Del	Amp_20q11.21	0.00877	1
Amp_5q22.3	Del_18q12.2	0.00878	1
15q-Del	Amp_20p11.21	0.0088	1
B2M	PRRG1	0.00881	1
B2M	BIRC3	0.00881	1
FMN2	1q-Amp	0.00881	1
OR4D10	BIRC3	0.00881	1
MVK	GMPS	0.00881	1
PIK3R1	L1TD1	0.00883	1
PIK3R1	PRPS1	0.00883	1
Amp_8q12.1	Amp_13q12.2	0.00885	1
7q-Amp	Amp_17q24.1	0.00887	1
Del_4p16.2	Del_10q25.2	0.00888	1
Del_5q21.2	Del_10q25.2	0.00888	1
Del_6q26	Del_15q21.1	0.00889	1
NF2	MGA	0.0089	1
17q-Amp	8q-Amp	0.00892	1
P2RY13	DCLK2	0.00894	1
P2RY13	GPATCH8	0.00894	1
DCLK2	FYN	0.00894	1
TPRKB	SMAD4	0.00896	1
4q-Del	Del_2p12	0.00896	1
ZBTB20	CDK12	0.00897	1
MAP4K3	CDK12	0.00897	1
Del_3p26.3	Del_15q22.33	0.00898	1
Del_4p16.2	Del_5q22.2	0.00898	1
GRB2	CTNNB1	0.00903	1
1p-Del	Amp_20q13.31	0.00903	1
B2M	ACVR1B	0.00905	1
GMPS	KDM6A	0.00905	1
ARID1A	CHUK	0.00907	1
TOP2B	Del_16q23.1	0.00907	1
2q-Amp	Amp_8q24.21	0.00907	1
20q-Amp	Del_4p16.2	0.00909	1
Del_5q21.2	Del_15q22.33	0.00909	1
1p-Del	Del_6q26	0.00915	1
Del_3q26.31	Del_4q22.1	0.00919	1
MAPK6	ST3GAL6	0.0092	1
MAPK6	PLEKHF2	0.0092	1
EGR1	FKBP9	0.0092	1
ST3GAL6	ALDH1A3	0.0092	1
C14orf184	CREBBP	0.00922	1
9p-Amp	18q-Del	0.00922	1
Del_8p22	Del_17q24.3	0.00927	1
WNT1	BMPR2	0.00931	1
BCL9	NLRC4	0.00933	1
BCL9	SLC12A6	0.00933	1
Del_5q22.2	Del_8p22	0.00935	1
ASXL1	KDM6A	0.00936	1
Amp_13q12.13	Amp_19p13.2	0.00938	1
ATXN3L	BMPR2	0.00939	1
BMPR2	NEXN	0.00939	1
MGA	DDX26B	0.0094	1
MGA	GMPS	0.0094	1
2p-Amp	Amp_13q22.1	0.00942	1
IFT57	BMPR2	0.00947	1
SELPLG	NF2	0.0095	1
NLRC4	PRPS1	0.00951	1
BCORL1	PTGDR	0.00951	1
14q-Del	Amp_20p11.21	0.00951	1
PLAGL2	IFT57	0.00953	1
16p-Amp	Del_18q12.2	0.00954	1
7p-Amp	Amp_5q22.3	0.00954	1
Del_1p33	Del_14q11.2	0.00954	1
20q-Amp	8p-Amp	0.00957	1
CHUK	L1TD1	0.00958	1
C11orf30	SLC26A8	0.00958	1
C11orf30	L1TD1	0.00958	1
BMPR2	Del_16q23.1	0.00964	1
MLH1	PIK3R1	0.00965	1
MVK	PIK3R1	0.00967	1
PIK3R1	BIRC3	0.00967	1
TP53	Del_4q22.1	0.00968	1
MPHOSPH10	ATM	0.0097	1
Del_6q26	Del_14q31.1	0.0097	1
Del_14q31.1	Del_19p13.3	0.0097	1
GGT1	NF1	0.00973	1
GGT1	Amp_8p11.21	0.00973	1
PLEKHF2	PTEN	0.00973	1
B2M	GMNN	0.0098	1
FAM123B	CDK12	0.00981	1
Del_5q22.2	Del_10q21.1	0.00982	1
18p-Del	Amp_8q24.21	0.00984	1
Amp_2q33.1	Del_12p13.1	0.00984	1
Del_15q15.2	Del_21q11.2	0.00984	1
CDH1	CHUK	0.00985	1
Amp_20p11.21	Del_14q31.1	0.00986	1
ZFP36L2	BCORL1	0.00991	1
NLRC4	HLA-A	0.00991	1
HLA-A	BCORL1	0.00991	1
HLA-A	SLC12A6	0.00991	1
Del_1p13.2	Del_5q22.2	0.00991	1
PTEN	LARP4B	0.00992	1
6p-Amp	9p-Amp	0.00994	1
PTCH1	C11orf30	0.00999	1
8q-Amp	Del_5q21.2	0.00999	1
4q-Del	Del_10q23.31	0.01	1
FAM123B	CREBBP	0.0101	1
CDH1	KDM6A	0.0101	1
ASXL1	BMPR2	0.0101	1
1q-Amp	7p-Amp	0.0101	1
7p-Amp	Del_7q31.1	0.0101	1
CDH1	PRPS1	0.0102	1
MLH1	RBBP7	0.0102	1
MLH1	HLA-A	0.0102	1
FMN2	OR4D10	0.0102	1
18p-Del	Del_3p26.3	0.0102	1
IQCD	ROS1	0.0103	1
L1TD1	CREBBP	0.0103	1
5q-Del	Del_15q11.2	0.0103	1
Del_1p13.2	Del_5q21.2	0.0103	1
TXNDC2	GGT1	0.0104	1
TXNDC2	TPRKB	0.0104	1
STARD3NL	DIP2B	0.0104	1
P2RY13	DIP2B	0.0104	1
DIP2B	DCLK2	0.0104	1
DCLK2	LARP4B	0.0104	1
FYN	LARP4B	0.0104	1
20q-Amp	4p-Del	0.0104	1
ZFP36L2	MVK	0.0105	1
NF2	P2RY13	0.0105	1
MVK	RBBP7	0.0105	1
MVK	HLA-A	0.0105	1
PTCH1	LARP4B	0.0105	1
PRRG1	HLA-A	0.0105	1
HLA-A	BIRC3	0.0105	1
20p-Amp	Del_10q21.1	0.0105	1
2p-Amp	Amp_12p13.32	0.0105	1
8p-Del	Amp_8p11.21	0.0105	1
PRPS1	KDM6A	0.0106	1
17q-Amp	Amp_8p11.21	0.0106	1
Amp_20q12	Del_1p33	0.0106	1
Del_1p36.11	Del_5q12.1	0.0106	1
Del_15q11.2	Del_19p13.3	0.0106	1
ATXN3L	ST3GAL6	0.0107	1
ATXN3L	Del_10q25.2	0.0107	1
ST3GAL6	NEXN	0.0107	1
RLIM	ROS1	0.0107	1
PTEN	CREBBP	0.0107	1
20q-Amp	Del_22q13.32	0.0107	1
B2M	P2RY13	0.0108	1
OR4D10	GPATCH8	0.0108	1
RBPJ	GPATCH8	0.0108	1
FYN	GMPS	0.0108	1
GPATCH8	GMPS	0.0108	1
7q-Amp	Del_5q21.2	0.0108	1
TXNDC2	NF2	0.0109	1
BCL9	PTEN	0.0109	1
VCX2	Del_5q22.2	0.0109	1
PTEN	BCORL1	0.0109	1
17q-Amp	Del_8p22	0.0109	1
Del_8p22	Del_12p13.1	0.0109	1
ACVR1B	BCL9	0.011	1
ACVR1B	NLRC4	0.011	1
GGT1	18p-Del	0.011	1
ERBB2	C14orf184	0.011	1
2q-Amp	Amp_1q31.1	0.011	1
Del_5q12.1	Del_18p11.31	0.011	1
FAM123B	RBBP7	0.0111	1
OR4D10	ATM	0.0111	1
NF1	IFT57	0.0111	1
PLAGL2	PRRG1	0.0111	1
RBBP7	GMNN	0.0111	1
7p-Amp	Del_5q21.2	0.0111	1
18q-Del	Del_3p26.3	0.0111	1
Amp_13q12.13	Del_19p13.3	0.0111	1
TXNDC2	MAPK6	0.0112	1
WNT1	EGR1	0.0112	1
WNT1	ST3GAL6	0.0112	1
SELPLG	PRKDC	0.0112	1
SELPLG	TOP2B	0.0112	1
PRKDC	ALDH1A3	0.0112	1
NF1	ASXL1	0.0112	1
ATXN3L	PTCH1	0.0112	1
PIK3R1	SETD2	0.0112	1
Del_6q26	Del_16p13.3	0.0112	1
P2RY13	CREBBP	0.0113	1
9p-Amp	Amp_8q24.21	0.0113	1
8p-Del	Del_1p36.11	0.0113	1
Amp_13q12.2	Del_8q11.1	0.0113	1
APC	TP53	0.0114	1
RBPJ	PTEN	0.0114	1
20p-Amp	Amp_8p11.23	0.0114	1
20p-Amp	Del_14q31.1	0.0114	1
Del_5q12.1	Del_22q13.32	0.0114	1
TP53	NF1	0.0115	1
B2M	SETD2	0.0115	1
OR4D10	SETD2	0.0115	1
DDX26B	SETD2	0.0115	1
SETD2	GMPS	0.0115	1
Del_1p36.11	Del_15q15.2	0.0115	1
CDH1	RBPJ	0.0116	1
CHUK	NEXN	0.0116	1
8p-Amp	5q-Del	0.0116	1
21q-Del	Del_6q26	0.0116	1
21q-Del	Del_19p13.3	0.0116	1
BCOR	DDX26B	0.0117	1
FMN2	EGR1	0.0117	1
FMN2	VCX2	0.0117	1
ATXN3L	PTEN	0.0117	1
IQCD	L1TD1	0.0117	1
IFT57	SLC26A8	0.0117	1
IFT57	FKBP9	0.0117	1
MPHOSPH10	PTEN	0.0117	1
MPHOSPH10	CTNNB1	0.0117	1
FKBP9	ZNF486	0.0117	1
9p-Amp	Del_18q22.1	0.0117	1
Del_1p36.11	Del_5q21.2	0.0117	1
4p-Del	Del_2p12	0.0118	1
20q-Amp	2p-Amp	0.0119	1
7q-Amp	15q-Del	0.0119	1
ARID1A	NEXN	0.012	1
PIK3R1	SLC12A6	0.012	1
SMAD4	LARP4B	0.012	1
Amp_1q31.1	Amp_19p13.2	0.012	1
Amp_2q33.1	Amp_17q24.1	0.012	1
16p-Amp	Amp_12p13.32	0.0121	1
STARD3NL	PRKDC	0.0122	1
PRKDC	P2RY13	0.0122	1
PRKDC	GRB2	0.0122	1
PRKDC	DCLK2	0.0122	1
8p-Amp	Amp_20q11.21	0.0122	1
4p-Del	Del_3p14.2	0.0122	1
Amp_5q22.3	Del_18p11.31	0.0122	1
EGR1	ZBTB20	0.0123	1
EGR1	MAP4K3	0.0123	1
BCL9	MPHOSPH10	0.0123	1
ZBTB20	ST3GAL6	0.0123	1
NLRC4	MPHOSPH10	0.0123	1
MPHOSPH10	BCORL1	0.0123	1
MPHOSPH10	SLC12A6	0.0123	1
13q-Amp	Del_21q11.2	0.0123	1
21q-Del	Del_17q24.3	0.0123	1
Del_6p25.3	Del_17q24.3	0.0123	1
FBXW7	FKBP9	0.0124	1
MGA	RBBP7	0.0124	1
MGA	HLA-A	0.0124	1
PRRG1	RLIM	0.0124	1
RSPH3	2p-Amp	0.0124	1
12p-Amp	16p-Amp	0.0124	1
5q-Del	Del_18p11.31	0.0124	1
ARID1A	TOP2B	0.0125	1
13q-Amp	1q-Amp	0.0125	1
Amp_11p15.5	Del_10q21.1	0.0125	1
SMAD2	ALPK2	0.0126	1
OR4D10	ALPK2	0.0126	1
MVK	ATM	0.0126	1
ALPK2	DDX26B	0.0126	1
PLAGL2	SETD2	0.0126	1
BMPR2	BIRC3	0.0126	1
Amp_8q12.1	Amp_17q24.1	0.0126	1
TP53	Del_14q11.2	0.0127	1
8q-Amp	18p-Del	0.0127	1
Amp_6p21.1	Del_3p14.2	0.0128	1
MLH1	IQCD	0.0129	1
MLH1	ZNF486	0.0129	1
RPTN	P2RY13	0.0129	1
NR1H3	RBBP7	0.0129	1
RBBP7	GPATCH8	0.0129	1
13q-Amp	Amp_8q24.21	0.0129	1
Del_8p23.2	Del_17q24.3	0.0129	1
B2M	OR4D10	0.013	1
CDH1	NEXN	0.013	1
OR4D10	RBPJ	0.013	1
OR4D10	GMPS	0.013	1
FBXW7	Del_7q31.1	0.013	1
1q-Amp	Del_16p13.3	0.013	1
2p-Amp	Amp_20q11.21	0.013	1
22q-Del	Del_16p13.3	0.013	1
4p-Del	Amp_20q13.31	0.013	1
Amp_1q31.1	Amp_13q12.13	0.013	1
Amp_8q12.1	Del_18p11.31	0.013	1
Amp_13q12.2	Del_21q11.2	0.013	1
CDH1	CDK12	0.0131	1
STARD3NL	CDK12	0.0131	1
RPTN	RB1	0.0131	1
P2RY13	CDK12	0.0131	1
PTCH1	GRB2	0.0131	1
PTCH1	RSPH3	0.0131	1
RB1	HLA-A	0.0131	1
DCLK2	CDK12	0.0131	1
FYN	CDK12	0.0131	1
2q-Amp	7p-Amp	0.0131	1
17p-Del	Del_6p25.3	0.0131	1
Del_1p33	Del_3p14.2	0.0131	1
Del_1p33	Del_5q21.2	0.0131	1
18q-Del	Amp_17q12	0.0132	1
8p-Del	Del_6q26	0.0132	1
OR4D10	DIP2B	0.0133	1
DIP2B	DDX26B	0.0133	1
DIP2B	GMPS	0.0133	1
DDX26B	LARP4B	0.0133	1
Amp_13q12.2	Del_1p33	0.0133	1
Del_5q12.1	Del_15q21.1	0.0133	1
MLH1	CHUK	0.0134	1
STARD3NL	PIK3R1	0.0134	1
ALPK2	PLAGL2	0.0134	1
PIK3R1	GPATCH8	0.0134	1
13q-Amp	8q-Amp	0.0134	1
7p-Amp	Del_4q35.1	0.0134	1
Amp_17q12	Del_2p12	0.0134	1
Del_1p36.11	Del_15q21.1	0.0134	1
TXNDC2	CDH1	0.0135	1
ATXN3L	IQCD	0.0135	1
ATXN3L	TOP2B	0.0135	1
ATXN3L	ZNF486	0.0135	1
IQCD	NEXN	0.0135	1
C11orf30	CDK12	0.0135	1
TOP2B	NEXN	0.0135	1
NEXN	ZNF486	0.0135	1
Del_3q26.31	Del_6p25.3	0.0135	1
Del_10q23.31	Del_16p13.3	0.0135	1
Del_15q15.2	Del_17q24.3	0.0135	1
GGT1	8p-Amp	0.0136	1
P2RY13	CTNNB1	0.0136	1
NR1H3	CTNNB1	0.0136	1
GRB2	SETD2	0.0136	1
Del_4p16.2	Del_21q11.2	0.0136	1
FMN2	CDK12	0.0137	1
PTEN	C14orf184	0.0137	1
RNF43	B2M	0.0138	1
MLH1	ALPK2	0.0138	1
SELPLG	GMNN	0.0138	1
FAM9A	RB1	0.0138	1
RSPH3	RB1	0.0138	1
8p-Amp	Amp_20q13.31	0.0138	1
Amp_8q12.1	Del_17p12	0.0138	1
NF1	BCORL1	0.0139	1
CHUK	IDH1	0.0139	1
MVK	RB1	0.0139	1
C11orf30	MAP4K3	0.0139	1
C11orf30	IDH1	0.0139	1
Del_2q22.1	Del_6q26	0.0139	1
SMAD2	ST3GAL6	0.014	1
EGR1	ATM	0.014	1
FBXW7	PRRG1	0.014	1
8q-Amp	Del_5q22.2	0.014	1
9p-Amp	Del_18q21.2	0.014	1
Amp_10q22.3	Del_10q25.2	0.014	1
ATXN3L	CREBBP	0.0141	1
SETD2	CTNNB1	0.0141	1
NEXN	CREBBP	0.0141	1
8q-Amp	Del_18p11.31	0.0141	1
BCOR	ALPK2	0.0142	1
BCOR	ASXL1	0.0142	1
FMN2	RBBP7	0.0142	1
FMN2	HLA-A	0.0142	1
SELPLG	ROS1	0.0142	1
ROS1	FKBP9	0.0142	1
15q-Del	Del_8q11.1	0.0142	1
Amp_13q22.1	Del_1p33	0.0142	1
APC	Del_18q22.1	0.0143	1
LARP4B	PTGDR	0.0143	1
PLAGL2	CTNNB1	0.0144	1
7p-Amp	Amp_6p21.1	0.0144	1
14q-Del	Del_5q12.1	0.0144	1
MVK	L1TD1	0.0145	1
MVK	ALDH1A3	0.0145	1
SLC26A8	BIRC3	0.0145	1
ACVR1B	TPRKB	0.0146	1
PRRG1	ROS1	0.0146	1
Amp_17q24.1	Amp_20q12	0.0146	1
CRIPAK	ZFP36L2	0.0147	1
FAM123B	C11orf30	0.0147	1
ALPK2	GRB2	0.0147	1
17p-Del	Del_1p33	0.0147	1
Amp_20p11.21	Del_15q22.33	0.0147	1
Del_15q21.1	Del_17q24.3	0.0148	1
13q-Amp	Del_15q21.1	0.0149	1
20p-Del	Del_1p13.2	0.0149	1
Del_1p13.2	Del_8p22	0.0149	1
BCOR	BCORL1	0.015	1
SELPLG	NLRC4	0.015	1
NF2	RBPJ	0.015	1
NF2	GMPS	0.015	1
MAPK6	BCL9	0.015	1
MAPK6	SLC12A6	0.015	1
ZBTB20	PIK3R1	0.015	1
ASXL1	ATM	0.015	1
SLC26A8	SLC12A6	0.015	1
L1TD1	BCORL1	0.015	1
Del_5q22.2	Del_8p23.2	0.015	1
MLH1	PTGDR	0.0151	1
GGT1	Del_15q11.2	0.0151	1
NF1	6p-Amp	0.0151	1
RLIM	DCLK2	0.0151	1
RLIM	GPATCH8	0.0151	1
21q-Del	Del_10q21.1	0.0151	1
TXNDC2	RB1	0.0152	1
WNT1	PRRG1	0.0152	1
ATM	HIST1H1T	0.0152	1
20q-Amp	21q-Del	0.0152	1
7q-Amp	Del_15q11.2	0.0152	1
9p-Amp	Del_18q12.2	0.0152	1
TP53	Del_5q22.2	0.0153	1
PRKDC	NEXN	0.0153	1
5q-Del	Del_22q13.32	0.0153	1
ERBB2	PRRG1	0.0154	1
2p-Amp	Amp_20q12	0.0154	1
B2M	RPTN	0.0155	1
B2M	RBBP7	0.0155	1
ZBTB20	IQCD	0.0155	1
RBPJ	RBBP7	0.0155	1
RBBP7	GMPS	0.0155	1
MAP4K3	ZNF486	0.0155	1
5q-Del	Del_4p16.2	0.0155	1
13q-Amp	8p-Del	0.0156	1
FAM9A	PRPS1	0.0157	1
13q-Amp	Del_8q11.1	0.0157	1
SOX9	ALG12	0.0158	1
NF2	ASXL1	0.0158	1
FBXW7	RB1	0.0158	1
20p-Amp	Amp_8p11.21	0.0158	1
4p-Del	Del_19p13.3	0.0158	1
Del_1p13.2	Del_8p23.2	0.0158	1
Del_3p14.2	Del_6p25.3	0.0158	1
RNF43	RSPH3	0.0159	1
CHUK	ALPK2	0.0159	1
PLEKHF2	C11orf30	0.0159	1
Amp_6p21.1	Amp_17q12	0.0159	1
PTGDR	CTNNB1	0.016	1
DDX26B	CREBBP	0.0161	1
GMPS	CREBBP	0.0161	1
1p-Del	Del_5q12.1	0.0161	1
ARID1A	CRIPAK	0.0162	1
TXNDC2	CDK12	0.0162	1
TOP2B	MAP4K3	0.0162	1
20p-Del	Del_6q26	0.0162	1
Amp_20q11.21	Del_4q22.1	0.0162	1
C14orf184	Amp_8q12.1	0.0163	1
APC	CDH1	0.0164	1
TP53	Del_21q11.2	0.0164	1
SMAD2	C11orf30	0.0164	1
FMN2	CREBBP	0.0164	1
NF2	ST3GAL6	0.0164	1
16q-Amp	8q-Amp	0.0164	1
17q-Amp	Amp_6p21.1	0.0164	1
Amp_5q22.3	Del_3p26.3	0.0164	1
Amp_5q22.3	Del_18q22.1	0.0164	1
APC	Del_1p36.11	0.0165	1
Del_5q12.1	Del_15q11.2	0.0165	1
TP53	7q-Amp	0.0166	1
SOX9	MLH1	0.0166	1
ZFP36L2	LARP4B	0.0166	1
MAPK6	ATM	0.0166	1
RPTN	LARP4B	0.0166	1
DIP2B	HLA-A	0.0166	1
RBBP7	LARP4B	0.0166	1
16p-Amp	Amp_17q12	0.0166	1
20p-Amp	Del_14q11.2	0.0166	1
APC	18p-Del	0.0167	1
ARID1A	MAP4K3	0.0167	1
SOX9	C2orf29	0.0167	1
CDK12	GMPS	0.0167	1
TP53	Del_15q11.2	0.0168	1
FBXW7	MGA	0.0168	1
CDH1	RBBP7	0.0169	1
PIK3R1	BMPR2	0.0169	1
7q-Amp	Amp_6p21.1	0.0169	1
20p-Amp	Del_4q35.1	0.017	1
Amp_17q24.1	Amp_20p11.21	0.017	1
ALDH1A3	CTNNB1	0.0171	1
1p-Del	Del_14q11.2	0.0171	1
20p-Del	Del_7q31.1	0.0171	1
Amp_12p13.32	Del_7q31.1	0.0171	1
WNT1	GPATCH8	0.0174	1
BCL9	DIP2B	0.0174	1
BCL9	LARP4B	0.0174	1
ALG12	GPATCH8	0.0174	1
GRB2	BCORL1	0.0174	1
NLRC4	RSPH3	0.0174	1
RSPH3	SLC12A6	0.0174	1
LARP4B	SLC12A6	0.0174	1
Amp_17q24.1	Del_18q22.1	0.0174	1
Del_6q26	Del_8p23.2	0.0175	1
RNF43	CHUK	0.0176	1
STARD3NL	SLC26A8	0.0176	1
FAM9A	NF1	0.0176	1
P2RY13	L1TD1	0.0176	1
NR1H3	C2orf29	0.0176	1
SLC26A8	FYN	0.0176	1
L1TD1	DCLK2	0.0176	1
DCLK2	ALDH1A3	0.0176	1
FKBP9	FYN	0.0176	1
CRIPAK	CDH1	0.0177	1
CDH1	HIST1H1T	0.0177	1
BCOR	KDM6A	0.0177	1
RPTN	NF1	0.0177	1
TOP2B	SETD2	0.0177	1
PTEN	PRPS1	0.0177	1
1p-Del	Del_3p14.2	0.0177	1
CRIPAK	HIST1H1T	0.0178	1
BCOR	TPRKB	0.0178	1
18p-Del	Amp_5q22.3	0.0178	1
ARID1A	PTCH1	0.0179	1
TXNDC2	PLEKHF2	0.0179	1
ALPK2	Amp_12p13.32	0.0179	1
PIK3R1	RBPJ	0.0179	1
14q-Del	5q-Del	0.0179	1
ATXN3L	BCL9	0.018	1
NLRC4	NEXN	0.018	1
14q-Del	Del_21q11.2	0.0181	1
OR4D10	RLIM	0.0182	1
MLH1	BIRC3	0.0183	1
SMAD4	CREBBP	0.0183	1
2p-Amp	Amp_20q13.31	0.0183	1
MLH1	SELPLG	0.0184	1
MLH1	C2orf29	0.0184	1
MLH1	FKBP9	0.0184	1
RPTN	RBBP7	0.0184	1
RBBP7	HLA-A	0.0184	1
18q-Del	Amp_5q22.3	0.0184	1
PRKDC	ST3GAL6	0.0185	1
ROS1	NEXN	0.0185	1
Amp_20q11.21	Del_1p33	0.0185	1
APC	Del_18p11.31	0.0187	1
TXNDC2	ATM	0.0188	1
MAP4K3	CREBBP	0.0188	1
4q-Del	Amp_19p13.2	0.0188	1
4q-Del	Del_10q25.2	0.0188	1
Amp_20q11.21	Del_10q21.1	0.0188	1
ST3GAL6	SETD2	0.019	1
Amp_2q33.1	Amp_8q24.21	0.019	1
Amp_5q22.3	Del_18q21.2	0.019	1
Amp_17q24.1	Del_8p22	0.0191	1
Del_6q26	Del_12p13.1	0.0191	1
APC	18q-Del	0.0192	1
PRRG1	IDH1	0.0192	1
MAP4K3	BIRC3	0.0192	1
17q-Amp	Del_8p23.2	0.0192	1
Amp_2q33.1	Amp_8q12.1	0.0192	1
Del_8p23.2	Del_12p13.1	0.0192	1
ACVR1B	RSPH3	0.0193	1
1q-Amp	Amp_13q12.13	0.0193	1
7q-Amp	Del_15q15.2	0.0193	1
15q-Del	Del_3p26.3	0.0193	1
Del_1p36.11	Del_3p26.3	0.0193	1
Del_2q22.1	Del_8p22	0.0193	1
NLRC4	SMAD4	0.0194	1
8p-Amp	Amp_20q12	0.0194	1
Amp_2q33.1	Amp_20p11.21	0.0194	1
MAPK6	Del_16q23.1	0.0195	1
CHUK	CTNNB1	0.0195	1
TPRKB	LARP4B	0.0195	1
RBBP7	ATM	0.0195	1
FAM123B	BIRC3	0.0196	1
TXNDC2	ALPK2	0.0196	1
ALPK2	TOP2B	0.0196	1
Amp_17q12	Del_19p13.3	0.0196	1
Del_8p23.2	Del_10q21.1	0.0196	1
17q-Amp	Amp_20p11.21	0.0197	1
WNT1	DDX26B	0.0198	1
ERBB2	CREBBP	0.0198	1
C14orf184	GMPS	0.0198	1
CDH1	WNT1	0.0199	1
Del_2p12	Del_4p16.2	0.0199	1
FAM123B	SLC26A8	0.02	1
FAM123B	L1TD1	0.02	1
GGT1	7p-Amp	0.02	1
STARD3NL	ROS1	0.02	1
FAM9A	PTEN	0.02	1
THOC7	PTEN	0.02	1
IQCD	C11orf30	0.02	1
GRB2	PTEN	0.02	1
C11orf30	IFT57	0.02	1
RSPH3	PTEN	0.02	1
SOX9	ACVR1B	0.0202	1
MAPK6	PLAGL2	0.0202	1
ERBB2	PTCH1	0.0202	1
PLAGL2	SLC26A8	0.0202	1
BMPR2	PTGDR	0.0202	1
Amp_8q24.21	Del_18p11.31	0.0202	1
Del_4q22.1	Del_16q23.1	0.0202	1
13q-Amp	Del_15q22.33	0.0203	1
ATXN3L	FYN	0.0204	1
DIP2B	RLIM	0.0204	1
FYN	NEXN	0.0204	1
Del_5q12.1	Del_16p13.3	0.0204	1
PLEKHF2	ASXL1	0.0205	1
ROS1	CDK12	0.0205	1
8p-Del	Amp_13q22.1	0.0205	1
Amp_16p11.2	Del_4p16.2	0.0205	1
NEXN	KDM6A	0.0206	1
Del_4q22.1	Del_10q23.31	0.0206	1
FMN2	BMPR2	0.0207	1
OR4D10	BMPR2	0.0207	1
Amp_1q31.1	Amp_13q12.2	0.0207	1
Del_3p26.3	Del_18p11.31	0.0207	1
RBBP7	CDK12	0.0208	1
Del_3p26.3	Del_15q15.2	0.0208	1
FAM123B	DIP2B	0.0209	1
20q-Amp	2q-Amp	0.0209	1
21q-Del	Del_2p12	0.021	1
4q-Del	Del_3p14.2	0.021	1
Amp_6p21.1	Del_4q22.1	0.021	1
Amp_8p11.21	Del_17p12	0.021	1
7q-Amp	Amp_2q33.1	0.0211	1
18p-Del	Amp_8q12.1	0.0211	1
Amp_20p11.21	Del_4q35.1	0.0211	1
Del_16p13.3	Del_18q22.1	0.0211	1
TP53	CTNNB1	0.0212	1
B2M	MAPK6	0.0212	1
B2M	L1TD1	0.0212	1
SELPLG	GMPS	0.0212	1
OR4D10	L1TD1	0.0212	1
MAPK6	DDX26B	0.0212	1
MAPK6	RBPJ	0.0212	1
MAPK6	GMPS	0.0212	1
IFT57	PTEN	0.0212	1
DDX26B	ALDH1A3	0.0212	1
RBPJ	SLC26A8	0.0212	1
PTEN	ZNF486	0.0212	1
ALDH1A3	GMPS	0.0212	1
12p-Amp	8q-Amp	0.0212	1
ASXL1	MPHOSPH10	0.0213	1
Amp_11p15.5	Del_1p13.2	0.0213	1
Amp_17q24.1	Amp_20q13.31	0.0213	1
NLRC4	MAP4K3	0.0214	1
MAP4K3	SLC12A6	0.0214	1
4q-Del	Del_16q23.1	0.0214	1
Del_17q24.3	Del_21q11.2	0.0214	1
TXNDC2	NF1	0.0215	1
STARD3NL	RB1	0.0215	1
RNF43	CTNNB1	0.0216	1
PTEN	HLA-A	0.0216	1
20p-Del	Del_10q25.2	0.0216	1
P2RY13	PTEN	0.0217	1
DCLK2	PTEN	0.0217	1
12p-Amp	Amp_20p11.21	0.0217	1
17p-Del	Amp_8q24.21	0.0217	1
SMAD2	BIRC3	0.0218	1
Amp_20q13.31	Del_22q13.32	0.0218	1
CDH1	PRRG1	0.0219	1
FBXW7	BCORL1	0.0219	1
MGA	IFT57	0.0219	1
MGA	ZNF486	0.0219	1
PTCH1	PTGDR	0.0219	1
BCOR	C2orf29	0.022	1
BCOR	ALDH1A3	0.022	1
ERBB2	C11orf30	0.0221	1
PLAGL2	ROS1	0.0221	1
Amp_1q31.1	Amp_13q22.1	0.0221	1
Amp_6p21.1	Amp_17q24.1	0.0221	1
ZFP36L2	CREBBP	0.0222	1
RPTN	CREBBP	0.0222	1
20q-Amp	Amp_16p11.2	0.0222	1
ZFP36L2	ALG12	0.0223	1
ST3GAL6	SLC12A6	0.0223	1
PLEKHF2	BCORL1	0.0223	1
PLEKHF2	SLC12A6	0.0223	1
20p-Amp	Del_8p23.2	0.0223	1
8p-Del	Amp_20p11.21	0.0223	1
Amp_6p21.1	Del_6q26	0.0223	1
Amp_13q12.2	Del_17q24.3	0.0223	1
Del_3p26.3	Del_6q26	0.0223	1
Del_3p26.3	Del_19p13.3	0.0223	1
ARID1A	RLIM	0.0224	1
ARID1A	MPHOSPH10	0.0224	1
4p-Del	Del_16p13.3	0.0224	1
5q-Del	Amp_13q12.2	0.0224	1
Amp_13q12.2	Amp_19p13.2	0.0224	1
Del_3p26.3	Del_15q21.1	0.0224	1
RHOA	TOP2B	0.0225	1
IFT57	TOP2B	0.0225	1
2q-Amp	Amp_20q11.21	0.0225	1
ARID1A	Del_12p13.1	0.0226	1
BCOR	FBXW7	0.0226	1
7q-Amp	Del_15q21.1	0.0226	1
Amp_8q24.21	Del_2p12	0.0226	1
Amp_17q24.1	Del_8p23.2	0.0226	1
FMN2	ASXL1	0.0228	1
BCORL1	CDK12	0.0228	1
Amp_20q13.31	Del_1p13.2	0.0228	1
17q-Amp	Amp_13q12.2	0.0229	1
Amp_13q12.2	Del_19p13.3	0.023	1
NF2	KDM6A	0.0231	1
RNF43	ALG12	0.0232	1
Amp_8p11.23	Amp_17q24.1	0.0232	1
Amp_13q12.13	Del_21q11.2	0.0232	1
STARD3NL	ZBTB20	0.0233	1
STARD3NL	MAP4K3	0.0233	1
ZBTB20	P2RY13	0.0233	1
ZBTB20	NR1H3	0.0233	1
DCLK2	MAP4K3	0.0233	1
GPATCH8	IDH1	0.0233	1
15q-Del	Del_1p36.11	0.0233	1
PIK3R1	HLA-A	0.0234	1
22q-Del	Amp_20q13.31	0.0234	1
21q-Del	Del_5q21.2	0.0236	1
CDH1	SLC12A6	0.0237	1
NF2	IQCD	0.0237	1
NF2	ZNF486	0.0237	1
13q-Amp	17q-Amp	0.0237	1
CRIPAK	BCOR	0.0238	1
CDH1	RLIM	0.0238	1
CDH1	MPHOSPH10	0.0238	1
PRKDC	RBBP7	0.0238	1
NF1	ZBTB20	0.0238	1
7q-Amp	Amp_1q31.1	0.0238	1
Amp_8p11.21	Del_5q21.2	0.0238	1
Amp_17q12	Del_18q12.2	0.0239	1
Del_2p12	Del_8p23.2	0.0239	1
IFT57	CTNNB1	0.024	1
Del_16p13.3	Del_18q21.2	0.0241	1
APC	NF2	0.0242	1
Del_2q22.1	Del_5q21.2	0.0242	1
B2M	NEXN	0.0244	1
OR4D10	NEXN	0.0244	1
ATXN3L	DDX26B	0.0244	1
RBPJ	NEXN	0.0244	1
NEXN	GMPS	0.0244	1
15q-Del	Del_21q11.2	0.0244	1
TP53	PTEN	0.0245	1
PLAGL2	IDH1	0.0245	1
15q-Del	Del_6q26	0.0245	1
17p-Del	Del_2q22.1	0.0245	1
C2orf29	SETD2	0.0246	1
17p-Del	Del_3p14.2	0.0246	1
CHUK	BIRC3	0.0247	1
MVK	C11orf30	0.0247	1
C11orf30	PRRG1	0.0247	1
TP53	Del_22q13.32	0.0248	1
ACVR1B	EGR1	0.0248	1
GGT1	7q-Amp	0.0248	1
MLH1	STARD3NL	0.0249	1
MLH1	P2RY13	0.0249	1
MLH1	FYN	0.0249	1
WNT1	MPHOSPH10	0.0249	1
ZFP36L2	C2orf29	0.025	1
ZFP36L2	ALDH1A3	0.025	1
SELPLG	RBBP7	0.025	1
MAPK6	RBBP7	0.025	1
MAPK6	HLA-A	0.025	1
RPTN	L1TD1	0.025	1
SLC26A8	RBBP7	0.025	1
L1TD1	HLA-A	0.025	1
HLA-A	ALDH1A3	0.025	1
20q-Amp	Del_4q22.1	0.025	1
Del_4p16.2	Del_16q23.1	0.025	1
Del_8q11.1	Del_16p13.3	0.025	1
16q-Amp	Del_14q31.1	0.0251	1
Amp_8p11.23	Amp_13q12.2	0.0251	1
Del_15q21.1	Del_21q11.2	0.0251	1
ACVR1B	CREBBP	0.0252	1
SMAD2	BCL9	0.0252	1
NF2	PRPS1	0.0252	1
ZNF486	CREBBP	0.0252	1
Amp_20q11.21	Del_5q21.2	0.0252	1
Del_1p36.11	Del_6p25.3	0.0252	1
ACVR1B	MGA	0.0253	1
12p-Amp	Amp_16p11.2	0.0253	1
Amp_11p15.5	Del_22q13.32	0.0253	1
Amp_20q13.31	Del_16p13.3	0.0253	1
BCORL1	GMNN	0.0254	1
Del_5q22.2	Del_17q24.3	0.0254	1
GGT1	Amp_8q12.1	0.0255	1
DIP2B	PTEN	0.0255	1
1p-Del	20p-Del	0.0255	1
MLH1	PLAGL2	0.0256	1
IFT57	SETD2	0.0256	1
ZFP36L2	BMPR2	0.0257	1
GRB2	DIP2B	0.0258	1
Del_2q22.1	Del_17q24.3	0.0258	1
20p-Del	Del_14q31.1	0.0259	1
FAM123B	MGA	0.026	1
2q-Amp	Amp_20q12	0.0261	1
GGT1	Amp_8q24.21	0.0262	1
Amp_8p11.21	Amp_17q12	0.0262	1
MAPK6	PTCH1	0.0263	1
BCOR	NEXN	0.0264	1
SMAD2	PRKDC	0.0264	1
FBXW7	RLIM	0.0264	1
Amp_10q22.3	Del_1p13.2	0.0264	1
Amp_20q12	Del_5q12.1	0.0264	1
Amp_20q12	Del_10q21.1	0.0264	1
SMAD2	P2RY13	0.0265	1
PTGDR	CREBBP	0.0265	1
Del_1p36.11	Del_15q22.33	0.0265	1
Amp_17q12	Del_18q22.1	0.0266	1
FAM123B	P2RY13	0.0267	1
FAM123B	GPATCH8	0.0267	1
MLH1	BCORL1	0.0267	1
PRKDC	IFT57	0.0268	1
Amp_20q11.21	Del_5q22.2	0.0268	1
TP53	Amp_5q22.3	0.0271	1
HIST1H1T	CTNNB1	0.0272	1
12p-Amp	6p-Amp	0.0272	1
16p-Amp	14q-Del	0.0272	1
21q-Del	Del_5q22.2	0.0272	1
22q-Del	Del_5q22.2	0.0272	1
22q-Del	Del_12p13.1	0.0273	1
ST3GAL6	PIK3R1	0.0274	1
ST3GAL6	8p-Amp	0.0274	1
ALG12	8p-Amp	0.0274	1
BMPR2	HIST1H1T	0.0275	1
Amp_6p21.1	Amp_8q24.21	0.0275	1
Del_1p33	Del_8p22	0.0275	1
Del_5q12.1	Del_10q25.2	0.0275	1
WNT1	SLC26A8	0.0276	1
WNT1	ALDH1A3	0.0276	1
ALPK2	ZNF486	0.0276	1
NF2	RLIM	0.0277	1
NF2	MPHOSPH10	0.0277	1
MVK	TOP2B	0.0277	1
ST3GAL6	GRB2	0.0277	1
TOP2B	BIRC3	0.0277	1
Amp_10q22.3	Del_19p13.3	0.0277	1
18q-Del	Amp_11p15.5	0.0278	1
FMN2	LARP4B	0.0279	1
PRKDC	PTGDR	0.0279	1
NF1	P2RY13	0.0279	1
NF1	16q-Amp	0.0279	1
ZBTB20	RBPJ	0.0279	1
DDX26B	MAP4K3	0.0279	1
RBPJ	MAP4K3	0.0279	1
16q-Amp	Amp_8p11.21	0.0279	1
2p-Amp	7p-Amp	0.0279	1
7p-Amp	Del_15q11.2	0.0279	1
4p-Del	Amp_19p13.2	0.0279	1
CDH1	GRB2	0.028	1
RHOA	NLRC4	0.028	1
RHOA	SLC12A6	0.028	1
BCL9	ZNF486	0.028	1
NLRC4	ZNF486	0.028	1
GGT1	Del_8p23.2	0.0281	1
CDK12	CTNNB1	0.0281	1
20p-Del	Del_1p33	0.0281	1
Del_2q22.1	Del_10q21.1	0.0281	1
ERBB2	CTNNB1	0.0282	1
4q-Del	Del_12p13.1	0.0282	1
APC	CTNNB1	0.0283	1
ZFP36L2	Del_10q25.2	0.0283	1
Del_4q22.1	Del_21q11.2	0.0283	1
8q-Amp	Amp_13q22.1	0.0284	1
1p-Del	Amp_20q12	0.0285	1
MGA	PRRG1	0.0286	1
WNT1	CTNNB1	0.0287	1
C14orf184	CTNNB1	0.0287	1
17q-Amp	Amp_16p11.2	0.0287	1
7p-Amp	Del_16p13.3	0.0287	1
Amp_20p11.21	Del_10q21.1	0.0287	1
RPTN	NEXN	0.0288	1
P2RY13	PRPS1	0.0288	1
Amp_19p13.2	Del_8q11.1	0.0288	1
Del_3q26.31	Del_8q11.1	0.0288	1
Del_4q35.1	Del_16q23.1	0.0288	1
FMN2	TPRKB	0.0289	1
NF1	VCX2	0.0289	1
ASXL1	BCORL1	0.0289	1
NLRC4	BMPR2	0.0291	1
CHUK	PLAGL2	0.0292	1
PLAGL2	C11orf30	0.0292	1
6p-Amp	Amp_8p11.23	0.0292	1
RNF43	MAPK6	0.0293	1
ZFP36L2	CTNNB1	0.0293	1
RLIM	C2orf29	0.0293	1
MPHOSPH10	SLC26A8	0.0293	1
MPHOSPH10	ALDH1A3	0.0293	1
HLA-A	CTNNB1	0.0293	1
7p-Amp	Del_12p13.1	0.0293	1
1p-Del	Del_16p13.3	0.0293	1
CHUK	BCL9	0.0294	1
CHUK	SLC12A6	0.0294	1
NLRC4	C11orf30	0.0294	1
7p-Amp	Del_3p14.2	0.0294	1
20q-Amp	20p-Del	0.0295	1
7p-Amp	8p-Del	0.0295	1
Del_1p33	Del_6q26	0.0295	1
ATXN3L	LARP4B	0.0296	1
DIP2B	NEXN	0.0296	1
4p-Del	Amp_20q11.21	0.0296	1
5q-Del	Amp_13q12.13	0.0296	1
Amp_2q33.1	Amp_13q12.13	0.0296	1
Amp_19p13.2	Del_17q24.3	0.0296	1
RNF43	IQCD	0.0297	1
RNF43	IFT57	0.0297	1
16p-Amp	Del_4p16.2	0.0297	1
ARID1A	NR1H3	0.0298	1
ARID1A	FYN	0.0298	1
TP53	4p-Del	0.0299	1
STARD3NL	CHUK	0.0299	1
C11orf30	FYN	0.0299	1
BCOR	EGR1	0.03	1
Del_8p22	Del_10q25.2	0.03	1
PTCH1	GMPS	0.0301	1
TP53	Del_15q22.33	0.0302	1
1q-Amp	7q-Amp	0.0302	1
Del_5q12.1	Del_15q15.2	0.0302	1
MLH1	ZBTB20	0.0303	1
2q-Amp	Amp_20q13.31	0.0303	1
ATXN3L	ALG12	0.0305	1
SETD2	NEXN	0.0305	1
17q-Amp	Amp_13q12.13	0.0305	1
18p-Del	Del_8q11.1	0.0305	1
8p-Del	Del_1p13.2	0.0306	1
13q-Amp	2p-Amp	0.0307	1
20q-Amp	Amp_2q33.1	0.0308	1
20p-Del	Del_16p13.3	0.0308	1
APC	17p-Del	0.0309	1
CHUK	PTCH1	0.031	1
PRRG1	HIST1H1T	0.031	1
4p-Del	Del_10q25.2	0.031	1
Del_2p12	Del_8p22	0.031	1
MGA	MAP4K3	0.0311	1
RPTN	ERBB2	0.0312	1
SETD2	KDM6A	0.0312	1
16p-Amp	Amp_17q24.1	0.0312	1
20p-Amp	Amp_17q24.1	0.0312	1
21q-Del	Del_10q25.2	0.0313	1
DIP2B	LARP4B	0.0314	1
20q-Amp	22q-Del	0.0314	1
4q-Del	Del_7q31.1	0.0315	1
5q-Del	Del_14q11.2	0.0315	1
Amp_2q33.1	Del_14q11.2	0.0315	1
SMAD2	OR4D10	0.0316	1
20p-Amp	6p-Amp	0.0316	1
7p-Amp	Del_5q22.2	0.0316	1
B2M	RB1	0.0317	1
OR4D10	RB1	0.0317	1
PLAGL2	PTEN	0.0318	1
Del_1p33	Del_8p23.2	0.0318	1
CDH1	C11orf30	0.0319	1
22q-Del	Del_8q11.1	0.032	1
TPRKB	Amp_1q31.1	0.0321	1
Del_2p12	Del_4q22.1	0.0321	1
Del_1p33	Del_5q22.2	0.0322	1
RHOA	RSPH3	0.0324	1
IQCD	RSPH3	0.0324	1
GRB2	ZNF486	0.0324	1
15q-Del	5q-Del	0.0324	1
Amp_11p15.5	Amp_20p11.21	0.0324	1
CDH1	FKBP9	0.0325	1
PIK3R1	SMAD4	0.0325	1
OR4D10	PTGDR	0.0326	1
RBPJ	PTGDR	0.0326	1
GMPS	PTGDR	0.0326	1
7p-Amp	Del_15q22.33	0.0326	1
14q-Del	20p-Del	0.0326	1
Amp_17q12	Del_18q21.2	0.0326	1
ACVR1B	MLH1	0.0327	1
EGR1	ST3GAL6	0.0328	1
MLH1	THOC7	0.0329	1
MLH1	RBPJ	0.0329	1
EGR1	DIP2B	0.0329	1
NF1	Amp_5q22.3	0.0329	1
ZBTB20	RBBP7	0.0329	1
PLEKHF2	DIP2B	0.0329	1
PLEKHF2	LARP4B	0.0329	1
RBBP7	MAP4K3	0.0329	1
Amp_20p11.21	Del_4p16.2	0.0329	1
NF2	MVK	0.033	1
5q-Del	Del_10q21.1	0.0331	1
ATXN3L	ALPK2	0.0333	1
ASXL1	Amp_19p13.2	0.0333	1
VCX2	Del_5q21.2	0.0333	1
Amp_2q33.1	Amp_17q12	0.0333	1
MVK	SETD2	0.0334	1
4p-Del	Del_16q23.1	0.0334	1
Amp_6p21.1	Amp_16p11.2	0.0334	1
TXNDC2	NR1H3	0.0335	1
STARD3NL	TOP2B	0.0335	1
NR1H3	TOP2B	0.0335	1
TOP2B	FYN	0.0335	1
TOP2B	GPATCH8	0.0335	1
16q-Amp	Del_19p13.3	0.0335	1
5q-Del	Amp_8p11.23	0.0336	1
5q-Del	Del_14q31.1	0.0336	1
Del_6q26	Del_15q11.2	0.0336	1
ATXN3L	RLIM	0.0337	1
1p-Del	Amp_19p13.2	0.0337	1
1p-Del	Del_3q26.31	0.0337	1
IQCD	PTCH1	0.0338	1
PTCH1	IFT57	0.0338	1
Amp_19p13.2	Del_8p22	0.0338	1
SELPLG	MAPK6	0.0339	1
MAPK6	L1TD1	0.0339	1
MAPK6	FKBP9	0.0339	1
C2orf29	L1TD1	0.0339	1
SLC26A8	ALDH1A3	0.0339	1
FKBP9	ALDH1A3	0.0339	1
BMPR2	KDM6A	0.0339	1
4q-Del	Del_3p26.3	0.0339	1
Amp_13q12.2	Del_10q21.1	0.0339	1
TXNDC2	NLRC4	0.034	1
ZNF486	Del_16q23.1	0.0341	1
20q-Amp	4q-Del	0.0341	1
15q-Del	Del_5q22.2	0.0342	1
BCL9	PRRG1	0.0343	1
NLRC4	BIRC3	0.0343	1
SLC12A6	BIRC3	0.0343	1
Amp_5q22.3	Del_1p13.2	0.0343	1
ZFP36L2	ROS1	0.0344	1
ACVR1B	ASXL1	0.0345	1
Amp_16p11.2	Amp_17q12	0.0345	1
Amp_20q12	Del_1p13.2	0.0345	1
PTGDR	ATM	0.0346	1
HIST1H1T	Del_1p33	0.0346	1
RBPJ	Amp_8p11.23	0.0348	1
5q-Del	Amp_20q11.21	0.0349	1
DIP2B	MAP4K3	0.035	1
7p-Amp	Del_2q22.1	0.035	1
CDH1	PIK3R1	0.0351	1
FAM123B	B2M	0.0352	1
18q-Del	Amp_16p11.2	0.0353	1
Amp_20p11.21	Del_15q15.2	0.0353	1
CRIPAK	NF2	0.0354	1
CRIPAK	MGA	0.0354	1
GGT1	16q-Amp	0.0354	1
STARD3NL	HIST1H1T	0.0354	1
IQCD	RB1	0.0354	1
IFT57	RB1	0.0354	1
RB1	ZNF486	0.0354	1
DCLK2	HIST1H1T	0.0354	1
MVK	CTNNB1	0.0355	1
Del_8p22	Del_10q21.1	0.0355	1
B2M	CHUK	0.0356	1
OR4D10	CHUK	0.0356	1
C11orf30	RBPJ	0.0356	1
Amp_13q12.2	Amp_17q12	0.0356	1
FBXW7	ALPK2	0.0357	1
Amp_11p15.5	Amp_17q12	0.0359	1
Del_5q21.2	Del_17q24.3	0.0359	1
NF2	ALDH1A3	0.036	1
FAM9A	BMPR2	0.036	1
7p-Amp	Del_14q11.2	0.0361	1
7p-Amp	Del_15q21.1	0.0361	1
Amp_13q12.13	Del_1p36.11	0.0361	1
B2M	FBXW7	0.0362	1
OR4D10	FBXW7	0.0362	1
Amp_13q12.2	Del_1p36.11	0.0364	1
Del_6p25.3	Del_10q23.31	0.0364	1
Del_10q23.31	Del_19p13.3	0.0364	1
CRIPAK	Amp_5q22.3	0.0365	1
CRIPAK	Del_12p13.1	0.0365	1
PIK3R1	IFT57	0.0365	1
2q-Amp	Del_12p13.1	0.0365	1
TP53	Amp_17q24.1	0.0366	1
HLA-A	PRPS1	0.0366	1
TP53	Del_4q35.1	0.0367	1
PTCH1	HIST1H1T	0.0367	1
8p-Amp	Amp_17q12	0.0367	1
20p-Del	5q-Del	0.0367	1
Del_5q12.1	Del_21q11.2	0.0367	1
1q-Amp	Amp_13q12.2	0.0368	1
FAM9A	Amp_12p13.32	0.0369	1
NF1	L1TD1	0.0369	1
NF1	ALDH1A3	0.0369	1
PTCH1	C14orf184	0.0369	1
PRKDC	MVK	0.0371	1
Amp_10q22.3	Del_22q13.32	0.0371	1
SMAD2	RBBP7	0.0372	1
ERBB2	ATM	0.0372	1
MAP4K3	SETD2	0.0372	1
16p-Amp	17q-Amp	0.0372	1
SOX9	C11orf30	0.0373	1
FAM9A	MVK	0.0373	1
FAM9A	PRRG1	0.0373	1
THOC7	BIRC3	0.0373	1
GRB2	PRRG1	0.0373	1
APC	20p-Amp	0.0374	1
MAPK6	PIK3R1	0.0374	1
PIK3R1	C2orf29	0.0374	1
PIK3R1	FKBP9	0.0374	1
PIK3R1	Del_16p13.3	0.0374	1
BCOR	RHOA	0.0375	1
BCOR	ZNF486	0.0375	1
Del_8p23.2	Del_16p13.3	0.0375	1
SMAD2	MGA	0.0376	1
FMN2	SLC12A6	0.0376	1
12p-Amp	Amp_5q22.3	0.0376	1
Del_5q12.1	Del_12p13.1	0.0376	1
ROS1	VCX2	0.0377	1
1p-Del	Del_5q21.2	0.0377	1
Del_4p16.2	Del_6q26	0.0378	1
Del_5q21.2	Del_19p13.3	0.0378	1
RBPJ	ATM	0.0379	1
ACVR1B	MVK	0.038	1
ERBB2	RLIM	0.038	1
PRRG1	KDM6A	0.038	1
TP53	Del_14q31.1	0.0381	1
C14orf184	ATM	0.0381	1
20p-Amp	Amp_17q12	0.0381	1
Del_16p13.3	Del_18q12.2	0.0381	1
RHOA	ST3GAL6	0.0382	1
ST3GAL6	ZNF486	0.0382	1
PLEKHF2	IFT57	0.0382	1
RB1	C14orf184	0.0382	1
RB1	HIST1H1T	0.0382	1
12p-Amp	Del_7q31.1	0.0382	1
7p-Amp	15q-Del	0.0383	1
BCOR	CREBBP	0.0384	1
ZBTB20	MPHOSPH10	0.0384	1
SELPLG	CREBBP	0.0385	1
RNF43	BIRC3	0.0386	1
1q-Amp	Amp_13q22.1	0.0386	1
7q-Amp	Del_17q24.3	0.0387	1
GGT1	Del_8p22	0.0388	1
DDX26B	PTEN	0.0388	1
Amp_12p13.32	Amp_16p11.2	0.0388	1
Amp_20q12	Del_5q21.2	0.0388	1
FBXW7	C2orf29	0.0389	1
ATXN3L	C2orf29	0.0389	1
ATXN3L	L1TD1	0.0389	1
C2orf29	NEXN	0.0389	1
FKBP9	NEXN	0.0389	1
20p-Amp	Amp_6p21.1	0.0389	1
Amp_13q22.1	Del_8q11.1	0.0389	1
Del_2q22.1	Del_10q25.2	0.0389	1
PLEKHF2	CDK12	0.039	1
22q-Del	Amp_20q11.21	0.039	1
ATM	GMNN	0.0392	1
Del_6q26	Del_15q22.33	0.0393	1
Del_15q22.33	Del_19p13.3	0.0393	1
P2RY13	Del_3p14.2	0.0394	1
PLAGL2	KDM6A	0.0396	1
2p-Amp	Del_3q26.31	0.0396	1
WNT1	CHUK	0.0397	1
WNT1	C11orf30	0.0397	1
2q-Amp	Amp_6p21.1	0.0397	1
Del_3p14.2	Del_4p16.2	0.0398	1
B2M	TXNDC2	0.0399	1
B2M	TOP2B	0.0399	1
TXNDC2	DDX26B	0.0399	1
ATXN3L	SMAD4	0.0399	1
SMAD4	NEXN	0.0399	1
Amp_19p13.2	Del_18q22.1	0.0399	1
B2M	TPRKB	0.04	1
OR4D10	TPRKB	0.04	1
MVK	PTEN	0.04	1
PTEN	BIRC3	0.04	1
GMPS	HIST1H1T	0.04	1
Del_6p25.3	Del_17p12	0.04	1
20q-Amp	Del_10q21.1	0.0401	1
4q-Del	Del_6q26	0.0402	1
ARID1A	ATXN3L	0.0404	1
21q-Del	Del_14q11.2	0.0404	1
APC	OR4D10	0.0405	1
4p-Del	Del_7q31.1	0.0406	1
Amp_8q12.1	Del_5q21.2	0.0406	1
TP53	Del_5q21.2	0.0407	1
Del_8q11.1	Del_10q23.31	0.0407	1
OR4D10	NF1	0.0408	1
NF1	GMPS	0.0408	1
FBXW7	CTNNB1	0.0408	1
RLIM	PTGDR	0.0408	1
MPHOSPH10	PRPS1	0.0408	1
FMN2	ZBTB20	0.0409	1
MGA	ASXL1	0.0409	1
ALPK2	12p-Amp	0.0409	1
Del_12p13.1	Del_17q24.3	0.0409	1
RHOA	LARP4B	0.041	1
PRKDC	PLAGL2	0.041	1
IQCD	LARP4B	0.041	1
DIP2B	ZNF486	0.041	1
FMN2	RSPH3	0.0411	1
7p-Amp	5q-Del	0.0411	1
Amp_8q24.21	Del_5q21.2	0.0411	1
Del_16p13.3	Del_22q13.32	0.0411	1
ARID1A	RBPJ	0.0412	1
GGT1	Del_18p11.31	0.0412	1
12p-Amp	9p-Amp	0.0413	1
BCL9	P2RY13	0.0414	1
BCL9	DCLK2	0.0414	1
BCL9	FYN	0.0414	1
P2RY13	NLRC4	0.0414	1
CDH1	ST3GAL6	0.0415	1
Del_10q23.31	Del_14q31.1	0.0417	1
CHUK	RBBP7	0.0419	1
16p-Amp	Amp_6p21.1	0.0419	1
Amp_6p21.1	Del_8q11.1	0.0419	1
Amp_17q24.1	Del_2q22.1	0.0419	1
FAM9A	CTNNB1	0.0423	1
16q-Amp	Amp_8q24.21	0.0423	1
MLH1	RPTN	0.0424	1
BCOR	CHUK	0.0424	1
P2RY13	SETD2	0.0424	1
PLAGL2	Del_16q23.1	0.0424	1
PCBP1	SETD2	0.0424	1
DCLK2	SETD2	0.0424	1
FYN	SETD2	0.0424	1
GPATCH8	SETD2	0.0424	1
20p-Amp	9p-Amp	0.0424	1
Del_2p12	Del_16q23.1	0.0424	1
STARD3NL	FAM9A	0.0425	1
STARD3NL	RSPH3	0.0425	1
FAM9A	P2RY13	0.0425	1
FAM9A	GPATCH8	0.0425	1
THOC7	16q-Amp	0.0425	1
RSPH3	FYN	0.0425	1
Amp_16p11.2	Amp_17q24.1	0.0425	1
FBXW7	PIK3R1	0.0426	1
7p-Amp	Del_14q31.1	0.0426	1
B2M	FMN2	0.0428	1
FMN2	GMPS	0.0428	1
ALG12	TOP2B	0.043	1
STARD3NL	SMAD4	0.0431	1
P2RY13	SMAD4	0.0431	1
NR1H3	SMAD4	0.0431	1
Del_1p13.2	Del_10q21.1	0.0431	1
Del_3p14.2	Del_21q11.2	0.0431	1
Del_3p14.2	Del_14q31.1	0.0433	1
Amp_13q12.13	Del_1p33	0.0435	1
SOX9	NF1	0.0437	1
FAM9A	FBXW7	0.0439	1
EGR1	MVK	0.044	1
MVK	ST3GAL6	0.044	1
ST3GAL6	BIRC3	0.044	1
NF2	DCLK2	0.0442	1
NF2	FYN	0.0442	1
20q-Amp	Del_16p13.3	0.0442	1
MAPK6	ZBTB20	0.0443	1
NF1	IQCD	0.0443	1
NF1	ZNF486	0.0443	1
ZBTB20	L1TD1	0.0443	1
16p-Amp	Del_14q11.2	0.0443	1
BCL9	CTNNB1	0.0444	1
RNF43	FBXW7	0.0445	1
RHOA	ZNF486	0.0445	1
IQCD	ZNF486	0.0445	1
LARP4B	CTNNB1	0.0445	1
Amp_2q33.1	Amp_20q12	0.0445	1
SOX9	CDK12	0.0446	1
TXNDC2	ROS1	0.0446	1
5q-Del	Amp_19p13.2	0.0446	1
Amp_20p11.21	Del_14q11.2	0.0446	1
ZFP36L2	RB1	0.0448	1
RPTN	TPRKB	0.0448	1
TPRKB	RBBP7	0.0448	1
RBBP7	RB1	0.0448	1
MLH1	PLEKHF2	0.0449	1
12p-Amp	Amp_6p21.1	0.0449	1
7p-Amp	Amp_1q31.1	0.0449	1
CRIPAK	BMPR2	0.045	1
SELPLG	PRPS1	0.0451	1
MAPK6	PRPS1	0.0451	1
SLC26A8	PRPS1	0.0451	1
SLC26A8	PTGDR	0.0451	1
L1TD1	PTGDR	0.0451	1
FKBP9	PTGDR	0.0451	1
ALDH1A3	PRPS1	0.0451	1
PRPS1	Del_16p13.3	0.0451	1
WNT1	NF1	0.0452	1
NF1	ALG12	0.0452	1
C14orf184	Amp_8p11.21	0.0452	1
Amp_20q12	Del_22q13.32	0.0452	1
7q-Amp	Del_5q22.2	0.0454	1
Del_10q23.31	Del_21q11.2	0.0454	1
SELPLG	ERBB2	0.0455	1
MAPK6	ERBB2	0.0455	1
Amp_1q31.1	Del_16p13.3	0.0455	1
B2M	MGA	0.0456	1
GGT1	Del_21q11.2	0.0456	1
STARD3NL	ASXL1	0.0456	1
MGA	RBPJ	0.0456	1
NR1H3	ALPK2	0.0456	1
ALPK2	DCLK2	0.0456	1
ASXL1	GPATCH8	0.0456	1
16q-Amp	Amp_17q12	0.0456	1
ACVR1B	STARD3NL	0.0457	1
ALPK2	PRPS1	0.0457	1
ALPK2	PTGDR	0.0457	1
FYN	KDM6A	0.0457	1
8q-Amp	Amp_12p13.32	0.0457	1
Del_3p14.2	Del_17q24.3	0.0457	1
BCOR	MVK	0.0458	1
BCOR	BIRC3	0.0458	1
EGR1	BMPR2	0.0458	1
NF2	NEXN	0.0459	1
Amp_19p13.2	Del_4q35.1	0.0459	1
PIK3R1	NEXN	0.046	1
8p-Amp	Amp_2q33.1	0.046	1
Amp_11p15.5	Del_18q12.2	0.046	1
20p-Del	Del_10q21.1	0.0461	1
Del_5q22.2	Del_21q11.2	0.0461	1
ARID1A	FMN2	0.0462	1
Amp_16p11.2	Del_18p11.31	0.0462	1
ALG12	1q-Amp	0.0464	1
1q-Amp	2q-Amp	0.0464	1
Amp_17q24.1	Del_18q21.2	0.0464	1
TP53	Del_19p13.3	0.0467	1
MGA	PTEN	0.0467	1
RNF43	FAM123B	0.0468	1
TXNDC2	RPTN	0.0468	1
FYN	CREBBP	0.0468	1
MLH1	BCOR	0.0472	1
MVK	8p-Amp	0.0472	1
Amp_13q12.13	Del_8q11.1	0.0472	1
CHUK	DIP2B	0.0474	1
CHUK	LARP4B	0.0474	1
Amp_8p11.23	Amp_13q22.1	0.0474	1
Amp_11p15.5	Del_17p12	0.0474	1
FAM123B	ST3GAL6	0.0475	1
SOX9	HLA-A	0.0479	1
OR4D10	GRB2	0.0479	1
FAM9A	GMPS	0.0479	1
GRB2	RBPJ	0.0479	1
Amp_13q22.1	Amp_17q24.1	0.0479	1
HIST1H1T	Del_1p13.2	0.0482	1
Del_2p12	Del_17q24.3	0.0483	1
APC	RB1	0.0484	1
IQCD	20p-Del	0.0485	1
IFT57	CDK12	0.0485	1
20p-Amp	Del_8p22	0.0485	1
18p-Del	Amp_8p11.21	0.0485	1
Del_19p13.3	Del_21q11.2	0.0486	1
CHUK	MPHOSPH10	0.0487	1
C11orf30	RLIM	0.0487	1
BCOR	TOP2B	0.0488	1
ZBTB20	PTCH1	0.0488	1
Amp_5q22.3	Amp_17q12	0.0488	1
RNF43	STARD3NL	0.0489	1
RNF43	DCLK2	0.0489	1
SMAD4	SLC12A6	0.049	1
CREBBP	Del_3q26.31	0.049	1
5q-Del	Del_15q22.33	0.049	1
Amp_8p11.23	Del_18q12.2	0.049	1
Amp_13q12.13	Del_3p26.3	0.049	1
Del_3p26.3	Del_8p22	0.049	1
TP53	5q-Del	0.0491	1
B2M	BCL9	0.0491	1
B2M	NLRC4	0.0491	1
B2M	BCORL1	0.0491	1
B2M	SLC12A6	0.0491	1
OR4D10	NLRC4	0.0491	1
OR4D10	SLC12A6	0.0491	1
RBPJ	BCORL1	0.0491	1
2p-Amp	Amp_20p11.21	0.0492	1
6p-Amp	Amp_20p11.21	0.0492	1
PTCH1	PRRG1	0.0493	1
PTCH1	BIRC3	0.0493	1
APC	STARD3NL	0.0496	1
APC	PCBP1	0.0496	1
Amp_1q31.1	Amp_20q13.31	0.0496	1
ATXN3L	PRPS1	0.0497	1
ATXN3L	PTGDR	0.0497	1
NEXN	PTGDR	0.0497	1
Amp_2q33.1	Del_7q31.1	0.0497	1
8q-Amp	Amp_16p11.2	0.0498	1
Del_1p33	Del_16p13.3	0.0498	1
FAM123B	CHUK	0.0499	1
WNT1	BCORL1	0.0499	1
ALG12	BCORL1	0.0499	1
NLRC4	C14orf184	0.0499	1
PIK3R1	KDM6A	0.0499	1
IFT57	ROS1	0.0499	1
ROS1	ZNF486	0.0499	1
Amp_20q11.21	Del_22q13.32	0.0499	1
SMAD2	MAPK6	0.05	1
SMAD2	ALDH1A3	0.05	1
STARD3NL	EGR1	0.05	1
EGR1	P2RY13	0.05	1
P2RY13	ST3GAL6	0.05	1
P2RY13	PLEKHF2	0.05	1
ST3GAL6	NR1H3	0.05	1
PLEKHF2	NR1H3	0.05	1
PLEKHF2	GPATCH8	0.05	1
Amp_20q11.21	Del_1p13.2	0.05	1
ACVR1B	SLC12A6	0.0502	1
EGR1	Amp_12p13.32	0.0502	1
7p-Amp	Del_17q24.3	0.0502	1
Del_3p14.2	Del_18q22.1	0.0502	1
TP53	15q-Del	0.0503	1
Amp_2q33.1	Amp_8p11.21	0.0503	1
Amp_20q12	Del_4q22.1	0.0503	1
SMAD2	CDK12	0.0504	1
20p-Del	Del_12p13.1	0.0504	1
Amp_20p11.21	Del_19p13.3	0.0504	1
ATXN3L	MAP4K3	0.0506	1
ZBTB20	NEXN	0.0506	1
16p-Amp	20p-Amp	0.0506	1
15q-Del	Amp_5q22.3	0.0506	1
Del_14q11.2	Del_21q11.2	0.0506	1
Amp_8p11.21	Del_5q22.2	0.0507	1
MVK	ZNF486	0.0511	1
IQCD	PRRG1	0.0511	1
IQCD	BIRC3	0.0511	1
PRRG1	ZNF486	0.0511	1
IFT57	BIRC3	0.0511	1
CHUK	PTEN	0.0512	1
RB1	MAP4K3	0.0516	1
Del_5q21.2	Del_10q23.31	0.0516	1
MLH1	FMN2	0.0519	1
Del_8p23.2	Del_21q11.2	0.0519	1
ARID1A	PRPS1	0.052	1
ARID1A	Del_7q31.1	0.052	1
16p-Amp	1q-Amp	0.052	1
20p-Del	Amp_13q22.1	0.0521	1
ATXN3L	Del_22q13.32	0.0522	1
BCOR	SMAD4	0.0524	1
13q-Amp	Del_1p36.11	0.0524	1
Amp_13q12.13	Amp_17q12	0.0525	1
TP53	C14orf184	0.0528	1
Amp_8q24.21	Amp_16p11.2	0.0528	1
NF2	FAM9A	0.053	1
2p-Amp	Amp_13q12.2	0.0531	1
Amp_8q24.21	Amp_19p13.2	0.0531	1
FBXW7	RBBP7	0.0533	1
FBXW7	HLA-A	0.0533	1
CHUK	SETD2	0.0534	1
ACVR1B	WNT1	0.0535	1
WNT1	KDM6A	0.0535	1
ALG12	KDM6A	0.0535	1
FAM9A	HLA-A	0.0536	1
GRB2	RBBP7	0.0536	1
PLEKHF2	ATM	0.0537	1
Amp_6p21.1	Amp_12p13.32	0.0537	1
TP53	Del_15q15.2	0.0539	1
Amp_1q31.1	Amp_2q33.1	0.0539	1
Amp_8q12.1	Del_5q22.2	0.0539	1
B2M	KDM6A	0.0541	1
ACVR1B	OR4D10	0.0541	1
ACVR1B	DDX26B	0.0541	1
CDH1	PTGDR	0.0541	1
C2orf29	CTNNB1	0.0541	1
DDX26B	KDM6A	0.0541	1
SLC26A8	CTNNB1	0.0541	1
FKBP9	CTNNB1	0.0541	1
Del_10q21.1	Del_14q31.1	0.0542	1
TXNDC2	LARP4B	0.0544	1
MPHOSPH10	TOP2B	0.0544	1
20p-Del	21q-Del	0.0544	1
16q-Amp	20p-Amp	0.0548	1
APC	ATM	0.0549	1
NF2	BCL9	0.0549	1
ARID1A	ZFP36L2	0.055	1
ARID1A	RBBP7	0.055	1
8p-Del	Del_1p33	0.055	1
GGT1	SELPLG	0.0551	1
TPRKB	C2orf29	0.0551	1
PTEN	MAP4K3	0.0551	1
ALDH1A3	HIST1H1T	0.0551	1
13q-Amp	Del_19p13.3	0.0551	1
4q-Del	Del_2q22.1	0.0551	1
1p-Del	8p-Del	0.0552	1
CDH1	MAP4K3	0.0554	1
FBXW7	NLRC4	0.0554	1
Amp_12p13.32	Del_10q25.2	0.0555	1
ARID1A	RHOA	0.0557	1
ARID1A	IQCD	0.0557	1
ZBTB20	8p-Amp	0.0557	1
ZFP36L2	MGA	0.0558	1
FMN2	PLEKHF2	0.0558	1
C11orf30	CTNNB1	0.0558	1
CRIPAK	Amp_1q31.1	0.0559	1
MAPK6	CHUK	0.056	1
CHUK	C2orf29	0.056	1
C11orf30	ALDH1A3	0.056	1
FAM9A	PTCH1	0.0563	1
PRKDC	ERBB2	0.0563	1
18q-Del	Amp_17q24.1	0.0563	1
5q-Del	Amp_20q13.31	0.0563	1
Amp_2q33.1	Amp_20q13.31	0.0563	1
Amp_19p13.2	Amp_20q13.31	0.0563	1
EGR1	DDX26B	0.0564	1
ST3GAL6	DDX26B	0.0564	1
ST3GAL6	RBPJ	0.0564	1
ST3GAL6	GMPS	0.0564	1
PLEKHF2	DDX26B	0.0564	1
PLEKHF2	RBPJ	0.0564	1
B2M	ALPK2	0.0566	1
IQCD	BMPR2	0.0566	1
ASXL1	RBPJ	0.0566	1
VCX2	7q-Amp	0.0567	1
16q-Amp	17p-Del	0.0567	1
FAM123B	MPHOSPH10	0.0568	1
16p-Amp	Amp_8p11.21	0.0569	1
21q-Del	Del_10q23.31	0.0569	1
Amp_13q22.1	Del_5q12.1	0.057	1
SMAD2	ATXN3L	0.0571	1
SMAD2	NEXN	0.0571	1
21q-Del	Del_4p16.2	0.0571	1
5q-Del	Del_12p13.1	0.0571	1
Amp_17q24.1	Del_14q31.1	0.0571	1
Amp_19p13.2	Del_12p13.1	0.0571	1
ALG12	Del_16q23.1	0.0573	1
4q-Del	Amp_20q12	0.0573	1
Amp_19p13.2	Del_4p16.2	0.0574	1
Del_3q26.31	Del_4p16.2	0.0574	1
ZFP36L2	NLRC4	0.0575	1
ZFP36L2	SLC12A6	0.0575	1
RPTN	NLRC4	0.0575	1
BCL9	RBBP7	0.0575	1
RBBP7	BCORL1	0.0575	1
FBXW7	SETD2	0.0576	1
TPRKB	SETD2	0.0576	1
SETD2	HIST1H1T	0.0576	1
4p-Del	Del_6q26	0.0577	1
Amp_19p13.2	Del_8p23.2	0.0577	1
Del_3p14.2	Del_6q26	0.0577	1
13q-Amp	Amp_8p11.23	0.0578	1
CDH1	HLA-A	0.0579	1
Amp_20q13.31	Del_5q21.2	0.058	1
STARD3NL	IFT57	0.0581	1
IFT57	DCLK2	0.0581	1
IFT57	GPATCH8	0.0581	1
FYN	ZNF486	0.0581	1
Del_3p14.2	Del_8p22	0.0582	1
CDH1	IQCD	0.0583	1
CDH1	IFT57	0.0583	1
PRKDC	RSPH3	0.0583	1
22q-Del	Amp_20q12	0.0584	1
20p-Amp	8p-Amp	0.0585	1
Amp_8p11.21	Del_18p11.31	0.0585	1
SOX9	RSPH3	0.0586	1
ZFP36L2	ATM	0.0586	1
TP53	14q-Del	0.0588	1
Amp_19p13.2	Del_1p33	0.0588	1
MVK	CDK12	0.0589	1
14q-Del	Amp_2q33.1	0.059	1
5q-Del	Del_21q11.2	0.059	1
MLH1	RHOA	0.0592	1
SMAD2	PTGDR	0.0592	1
MAPK6	PTEN	0.0592	1
P2RY13	PIK3R1	0.0596	1
NR1H3	PIK3R1	0.0596	1
GRB2	RLIM	0.0596	1
GRB2	MPHOSPH10	0.0596	1
PIK3R1	FYN	0.0596	1
16q-Amp	8p-Amp	0.0596	1
CRIPAK	RB1	0.0597	1
Amp_6p21.1	Amp_20q13.31	0.0597	1
Amp_8p11.23	Amp_17q12	0.0597	1
WNT1	NF2	0.0598	1
STARD3NL	LARP4B	0.0599	1
APC	SMAD4	0.06	1
SOX9	BCORL1	0.0601	1
NF1	Amp_8q12.1	0.0602	1
FBXW7	ROS1	0.0602	1
APC	Del_3p26.3	0.0603	1
TP53	Amp_8p11.21	0.0603	1
FAM123B	Del_6p25.3	0.0603	1
Del_6p25.3	Del_10q21.1	0.0603	1
Del_10q21.1	Del_19p13.3	0.0603	1
ATXN3L	TPRKB	0.0605	1
ATXN3L	HIST1H1T	0.0605	1
22q-Del	Amp_10q22.3	0.0605	1
Del_5q22.2	Del_10q25.2	0.0605	1
RNF43	RBPJ	0.0606	1
FAM123B	LARP4B	0.0606	1
SOX9	MGA	0.0606	1
PRPS1	Amp_8q12.1	0.0608	1
9p-Amp	Del_18p11.31	0.0608	1
Amp_8p11.23	Del_2p12	0.0608	1
GGT1	ASXL1	0.0609	1
TPRKB	ALPK2	0.0609	1
ALPK2	HIST1H1T	0.0609	1
TP53	CHUK	0.0611	1
BCOR	WNT1	0.0611	1
ZBTB20	CREBBP	0.0611	1
ATXN3L	22q-Del	0.0615	1
21q-Del	5q-Del	0.0615	1
22q-Del	Del_3q26.31	0.0615	1
ST3GAL6	CTNNB1	0.0616	1
FMN2	CHUK	0.0617	1
2p-Amp	Amp_13q12.13	0.0618	1
Amp_20q11.21	Del_17q24.3	0.0619	1
TXNDC2	SMAD4	0.062	1
GGT1	Del_15q15.2	0.062	1
WNT1	CREBBP	0.0621	1
TXNDC2	FKBP9	0.0624	1
L1TD1	TOP2B	0.0624	1
TOP2B	ALDH1A3	0.0624	1
CTNNB1	Amp_8p11.23	0.0624	1
Del_16p13.3	Del_19p13.3	0.0624	1
FAM123B	ZNF486	0.0625	1
20p-Del	Del_8p23.2	0.0627	1
Amp_8p11.23	Del_18q21.2	0.0628	1
CRIPAK	SLC12A6	0.063	1
ZFP36L2	EGR1	0.063	1
BCOR	BCL9	0.063	1
EGR1	RPTN	0.063	1
EGR1	HLA-A	0.063	1
RPTN	ST3GAL6	0.063	1
RPTN	PLEKHF2	0.063	1
PTCH1	GMNN	0.0632	1
ZFP36L2	KDM6A	0.0633	1
RBBP7	KDM6A	0.0633	1
HLA-A	KDM6A	0.0633	1
18q-Del	Del_2p12	0.0633	1
Amp_2q33.1	Amp_13q22.1	0.0633	1
ZFP36L2	PTEN	0.0634	1
RBBP7	PTEN	0.0634	1
ERBB2	LARP4B	0.0635	1
Amp_11p15.5	Del_14q11.2	0.0636	1
SOX9	RB1	0.0637	1
17q-Amp	20p-Amp	0.0637	1
NF1	MVK	0.0638	1
NF1	BIRC3	0.0638	1
ATXN3L	C11orf30	0.0639	1
C11orf30	NEXN	0.0639	1
Amp_2q33.1	Amp_6p21.1	0.0639	1
Amp_6p21.1	Amp_19p13.2	0.0639	1
Amp_19p13.2	Del_3p26.3	0.0639	1
Del_2q22.1	Del_21q11.2	0.0639	1
PTEN	Amp_8p11.23	0.064	1
Del_2p12	Del_10q25.2	0.0641	1
PRKDC	GMPS	0.0642	1
CHUK	PTGDR	0.0642	1
C11orf30	Del_7q31.1	0.0642	1
RNF43	HIST1H1T	0.0643	1
18p-Del	Amp_16p11.2	0.0643	1
1p-Del	Del_5q22.2	0.0643	1
RPTN	SETD2	0.0644	1
1p-Del	Del_15q11.2	0.0644	1
Amp_8p11.21	Del_5q12.1	0.0644	1
PRKDC	C14orf184	0.0645	1
SMAD2	ZBTB20	0.0646	1
SMAD2	MAP4K3	0.0646	1
GGT1	Del_14q11.2	0.0646	1
GGT1	Del_15q21.1	0.0646	1
20q-Amp	Del_5q12.1	0.0647	1
B2M	BCOR	0.0649	1
BCOR	FMN2	0.0649	1
BCOR	GMPS	0.0649	1
DDX26B	SMAD4	0.065	1
TP53	Del_17q24.3	0.0651	1
TP53	C2orf29	0.0653	1
16q-Amp	Del_8p22	0.0653	1
B2M	RHOA	0.0654	1
OR4D10	IFT57	0.0654	1
OR4D10	ZNF486	0.0654	1
IQCD	RBPJ	0.0654	1
IFT57	DDX26B	0.0654	1
IFT57	GMPS	0.0654	1
DDX26B	ZNF486	0.0654	1
6p-Amp	Amp_12p13.32	0.0654	1
Amp_6p21.1	Del_14q11.2	0.0654	1
FBXW7	SMAD4	0.0655	1
ERBB2	IQCD	0.0655	1
ERBB2	ZNF486	0.0655	1
IQCD	Amp_1q31.1	0.0655	1
PLAGL2	SMAD4	0.0655	1
MGA	GMNN	0.0657	1
PTGDR	Del_5q21.2	0.0657	1
Del_4p16.2	Del_7q31.1	0.0657	1
MLH1	MAPK6	0.0658	1
SELPLG	THOC7	0.0658	1
MAPK6	FAM9A	0.0658	1
GRB2	L1TD1	0.0658	1
GRB2	FKBP9	0.0658	1
GRB2	ALDH1A3	0.0658	1
RSPH3	L1TD1	0.0658	1
TP53	THOC7	0.066	1
TP53	Del_2q22.1	0.066	1
FAM9A	MGA	0.0661	1
FAM9A	12p-Amp	0.0661	1
MGA	RSPH3	0.0661	1
12p-Amp	Del_2q22.1	0.0661	1
Del_2q22.1	Del_5q12.1	0.0661	1
MAP4K3	HIST1H1T	0.0662	1
STARD3NL	MVK	0.0666	1
STARD3NL	BIRC3	0.0666	1
MVK	NR1H3	0.0666	1
NR1H3	PRRG1	0.0666	1
NLRC4	RLIM	0.0666	1
PRRG1	FYN	0.0666	1
PCBP1	BIRC3	0.0666	1
FYN	BIRC3	0.0666	1
17q-Amp	8p-Amp	0.0666	1
NF1	MAP4K3	0.0667	1
NF1	IDH1	0.0667	1
20p-Del	Amp_13q12.13	0.0669	1
Del_10q25.2	Del_12p13.1	0.067	1
MPHOSPH10	12p-Amp	0.0671	1
TPRKB	Amp_8p11.23	0.0672	1
18q-Del	Amp_8p11.23	0.0675	1
Amp_1q31.1	Del_2p12	0.0675	1
NR1H3	PTEN	0.0676	1
PTEN	GPATCH8	0.0676	1
RBPJ	CTNNB1	0.0678	1
GMPS	CTNNB1	0.0678	1
17p-Del	1p-Del	0.0679	1
TXNDC2	ASXL1	0.068	1
BCOR	PIK3R1	0.068	1
FMN2	MPHOSPH10	0.0683	1
Del_5q22.2	Del_15q22.33	0.0683	1
Del_8p22	Del_21q11.2	0.0686	1
Amp_10q22.3	Del_15q11.2	0.0687	1
SOX9	MAPK6	0.0688	1
ASXL1	HLA-A	0.0689	1
21q-Del	Del_7q31.1	0.0689	1
Amp_13q12.13	Del_17q24.3	0.0689	1
ACVR1B	2p-Amp	0.069	1
SOX9	ATM	0.0692	1
TOP2B	PTGDR	0.0693	1
TOP2B	Del_7q31.1	0.0693	1
20p-Amp	Del_4q22.1	0.0693	1
Amp_6p21.1	Del_14q31.1	0.0693	1
Del_5q22.2	Del_19p13.3	0.0693	1
Del_6q26	Del_7q31.1	0.0693	1
14q-Del	Del_10q21.1	0.0695	1
1p-Del	Amp_20q11.21	0.0698	1
ST3GAL6	MPHOSPH10	0.0699	1
FAM123B	C2orf29	0.07	1
FAM123B	FKBP9	0.07	1
LARP4B	BCORL1	0.07	1
Del_15q21.1	Del_16q23.1	0.07	1
4p-Del	Del_2q22.1	0.0701	1
NEXN	CTNNB1	0.0703	1
CTNNB1	Amp_19p13.2	0.0703	1
GPATCH8	CDK12	0.0704	1
APC	7p-Amp	0.0705	1
C14orf184	8q-Amp	0.0705	1
Del_5q21.2	Del_21q11.2	0.0705	1
B2M	LARP4B	0.0706	1
FAM9A	SMAD4	0.0706	1
SMAD4	Del_2q22.1	0.0706	1
ACVR1B	BCOR	0.0709	1
Amp_19p13.2	Del_19p13.3	0.0711	1
Del_3q26.31	Del_19p13.3	0.0711	1
APC	Del_12p13.1	0.0713	1
NF2	EGR1	0.0713	1
NF2	PLEKHF2	0.0713	1
BCL9	RB1	0.0713	1
Del_4q22.1	Del_10q25.2	0.0713	1
RHOA	PTEN	0.0715	1
16q-Amp	Del_4p16.2	0.0715	1
Amp_11p15.5	Del_18p11.31	0.0716	1
TP53	4q-Del	0.0717	1
14q-Del	Amp_11p15.5	0.0719	1
HIST1H1T	Amp_5q22.3	0.072	1
ZBTB20	C11orf30	0.0722	1
RSPH3	NEXN	0.0722	1
Del_2q22.1	Del_3q26.31	0.0722	1
ACVR1B	FBXW7	0.0724	1
Amp_8q12.1	Amp_16p11.2	0.0724	1
17q-Amp	Amp_5q22.3	0.0726	1
SELPLG	SMAD4	0.0727	1
ZFP36L2	RHOA	0.073	1
ZFP36L2	ZNF486	0.073	1
SMAD2	ERBB2	0.073	1
FMN2	IQCD	0.073	1
FMN2	IFT57	0.073	1
FMN2	ZNF486	0.073	1
IFT57	RBBP7	0.073	1
Amp_1q31.1	Amp_5q22.3	0.073	1
Amp_5q22.3	Amp_17q24.1	0.073	1
ACVR1B	MPHOSPH10	0.0731	1
FBXW7	P2RY13	0.0731	1
FBXW7	GPATCH8	0.0731	1
16q-Amp	Amp_8q12.1	0.0731	1
18q-Del	Del_16p13.3	0.0733	1
Amp_20p11.21	Del_15q21.1	0.0733	1
B2M	PIK3R1	0.0734	1
20p-Amp	Amp_16p11.2	0.0734	1
Del_3p26.3	Del_15q11.2	0.0734	1
PTCH1	Amp_8p11.23	0.0735	1
NF1	GMNN	0.0737	1
ATM	Del_3p14.2	0.0738	1
FBXW7	TOP2B	0.074	1
Del_5q12.1	Del_14q11.2	0.074	1
FAM9A	SETD2	0.0741	1
15q-Del	Del_19p13.3	0.0741	1
Del_1p13.2	Del_16p13.3	0.0741	1
ARID1A	KDM6A	0.0742	1
Del_3p26.3	Del_8p23.2	0.0742	1
20q-Amp	Del_5q21.2	0.0744	1
ACVR1B	ROS1	0.0745	1
ROS1	KDM6A	0.0745	1
Del_2p12	Del_18q12.2	0.0745	1
ST3GAL6	CREBBP	0.0747	1
B2M	MVK	0.0748	1
OR4D10	PRRG1	0.0748	1
FBXW7	MPHOSPH10	0.0748	1
Amp_5q22.3	Del_15q22.33	0.0748	1
SOX9	SETD2	0.0749	1
FBXW7	ZBTB20	0.0749	1
FBXW7	MAP4K3	0.0749	1
FBXW7	IDH1	0.0749	1
NF1	2p-Amp	0.0752	1
STARD3NL	P2RY13	0.0754	1
STARD3NL	FYN	0.0754	1
DCLK2	GPATCH8	0.0754	1
FYN	GPATCH8	0.0754	1
ARID1A	HIST1H1T	0.0755	1
ACVR1B	Amp_11p15.5	0.0755	1
MLH1	PRRG1	0.0756	1
Del_5q22.2	Del_22q13.32	0.0757	1
Del_15q15.2	Del_19p13.3	0.0757	1
Amp_20q12	Del_5q22.2	0.0758	1
FMN2	DIP2B	0.0761	1
20p-Amp	Del_15q11.2	0.0761	1
SELPLG	BCORL1	0.0763	1
SELPLG	SLC12A6	0.0763	1
BCL9	SLC26A8	0.0763	1
NLRC4	ALDH1A3	0.0763	1
L1TD1	SLC12A6	0.0763	1
ALDH1A3	BCORL1	0.0763	1
PTCH1	L1TD1	0.0764	1
13q-Amp	20p-Del	0.0766	1
Amp_20q13.31	Del_4q22.1	0.0766	1
FAM123B	PTCH1	0.0767	1
Amp_8q24.21	Del_5q12.1	0.0768	1
Del_3p26.3	Del_10q25.2	0.0769	1
WNT1	PTEN	0.077	1
ALG12	PTEN	0.077	1
SELPLG	ST3GAL6	0.0771	1
MAPK6	EGR1	0.0771	1
EGR1	L1TD1	0.0771	1
ST3GAL6	SLC26A8	0.0771	1
ST3GAL6	FKBP9	0.0771	1
PLEKHF2	ALDH1A3	0.0771	1
RLIM	SETD2	0.0772	1
Amp_20q13.31	Del_5q12.1	0.0773	1
SLC12A6	Del_10q21.1	0.0775	1
Del_14q31.1	Del_16p13.3	0.0776	1
TP53	Del_4p16.2	0.0779	1
GGT1	Del_3p26.3	0.0779	1
Del_18p11.31	Del_19p13.3	0.0779	1
21q-Del	Amp_20p11.21	0.0781	1
Del_2p12	Del_10q23.31	0.0781	1
FAM9A	ASXL1	0.0783	1
ALPK2	RSPH3	0.0783	1
ASXL1	RSPH3	0.0783	1
Amp_17q12	Del_2q22.1	0.0783	1
CDH1	GGT1	0.0784	1
CDH1	TPRKB	0.0784	1
1q-Amp	Amp_2q33.1	0.0786	1
Amp_13q22.1	Del_5q21.2	0.0786	1
ACVR1B	LARP4B	0.0787	1
GRB2	MAP4K3	0.0788	1
RSPH3	MAP4K3	0.0788	1
MLH1	BCL9	0.079	1
ROS1	MAP4K3	0.079	1
4q-Del	Amp_20q13.31	0.079	1
Del_4q22.1	Del_6p25.3	0.0791	1
Amp_8p11.23	Del_18q22.1	0.0795	1
FAM123B	PRRG1	0.0796	1
MGA	ALDH1A3	0.0796	1
C2orf29	12p-Amp	0.0796	1
Amp_8q24.21	Del_5q22.2	0.0796	1
BCOR	NF1	0.0797	1
MLH1	NEXN	0.0798	1
12p-Amp	Del_10q25.2	0.0799	1
NLRC4	PTGDR	0.0801	1
ROS1	FYN	0.0801	1
RB1	ALDH1A3	0.0801	1
BCORL1	PRPS1	0.0801	1
SLC12A6	PTGDR	0.0801	1
TXNDC2	ZBTB20	0.0802	1
TXNDC2	MAP4K3	0.0802	1
ZBTB20	TOP2B	0.0802	1
TOP2B	IDH1	0.0802	1
Del_3p14.2	Del_22q13.32	0.0802	1
Del_15q21.1	Del_19p13.3	0.0803	1
8p-Del	Del_10q25.2	0.0804	1
20q-Amp	Amp_6p21.1	0.0805	1
TP53	PLAGL2	0.0806	1
RHOA	MPHOSPH10	0.0808	1
IFT57	MPHOSPH10	0.0808	1
MPHOSPH10	ZNF486	0.0808	1
TP53	ERBB2	0.0809	1
PRKDC	RPTN	0.081	1
Amp_6p21.1	Del_12p13.1	0.081	1
Amp_20q12	Del_17q24.3	0.0811	1
1q-Amp	Amp_20q13.31	0.0816	1
4q-Del	Amp_20q11.21	0.0816	1
P2RY13	BMPR2	0.0817	1
DCLK2	BMPR2	0.0817	1
20p-Del	Del_21q11.2	0.0818	1
CRIPAK	4q-Del	0.0821	1
MGA	KDM6A	0.0821	1
Amp_20q13.31	Del_10q21.1	0.0821	1
20q-Amp	Del_1p13.2	0.0822	1
Del_8q11.1	Del_17q24.3	0.0822	1
1q-Amp	Del_5q22.2	0.0823	1
MLH1	PRPS1	0.0824	1
7p-Amp	Del_4q22.1	0.0824	1
RNF43	GRB2	0.0825	1
ALPK2	RLIM	0.0825	1
Del_3p14.2	Del_17p12	0.0826	1
OR4D10	CDK12	0.0828	1
EGR1	12p-Amp	0.0828	1
5q-Del	Del_1p36.11	0.0828	1
TP53	Amp_17q12	0.0832	1
2p-Amp	9p-Amp	0.0833	1
6p-Amp	Del_17q24.3	0.0833	1
ZFP36L2	PRRG1	0.0834	1
ZFP36L2	Amp_10q22.3	0.0834	1
RPTN	PRRG1	0.0834	1
PRRG1	SMAD4	0.0834	1
RBBP7	BIRC3	0.0834	1
Amp_10q22.3	Del_8q11.1	0.0834	1
ACVR1B	SLC26A8	0.0837	1
ACVR1B	L1TD1	0.0837	1
FMN2	L1TD1	0.0837	1
L1TD1	KDM6A	0.0837	1
FKBP9	KDM6A	0.0837	1
Amp_16p11.2	Del_16p13.3	0.0837	1
PRRG1	Amp_12p13.32	0.0838	1
EGR1	RB1	0.0839	1
ST3GAL6	RB1	0.0839	1
CREBBP	Del_16q23.1	0.0839	1
Amp_20p11.21	Del_5q12.1	0.084	1
Amp_12p13.32	Amp_13q22.1	0.0841	1
NLRC4	SETD2	0.0842	1
BCORL1	SETD2	0.0842	1
13q-Amp	Del_1p13.2	0.0843	1
B2M	NR1H3	0.0846	1
B2M	FYN	0.0846	1
B2M	GPATCH8	0.0846	1
STARD3NL	GMPS	0.0846	1
OR4D10	PCBP1	0.0846	1
OR4D10	DCLK2	0.0846	1
OR4D10	FYN	0.0846	1
P2RY13	RBPJ	0.0846	1
RBPJ	FYN	0.0846	1
DCLK2	GMPS	0.0846	1
20q-Amp	Amp_19p13.2	0.0846	1
FAM123B	NLRC4	0.0847	1
FAM123B	NEXN	0.0848	1
FAM123B	Amp_19p13.2	0.0848	1
WNT1	FBXW7	0.0849	1
FBXW7	ALG12	0.0849	1
FBXW7	C14orf184	0.0849	1
Amp_6p21.1	Del_4q35.1	0.0849	1
Amp_8p11.23	Del_19p13.3	0.085	1
APC	ERBB2	0.0851	1
BCL9	CDK12	0.0853	1
IQCD	ATM	0.0854	1
IFT57	ATM	0.0854	1
RLIM	ATM	0.0854	1
ATM	ZNF486	0.0854	1
Del_3p14.2	Del_14q11.2	0.0854	1
13q-Amp	Del_17q24.3	0.0855	1
ACVR1B	Del_7q31.1	0.0856	1
SMAD2	GRB2	0.0856	1
17q-Amp	Del_2q22.1	0.0856	1
Amp_5q22.3	Del_2q22.1	0.0856	1
16q-Amp	Amp_8p11.23	0.0858	1
NF1	Del_12p13.1	0.0859	1
VCX2	Amp_8q24.21	0.086	1
Del_2q22.1	Del_17p12	0.0861	1
CRIPAK	Del_5q21.2	0.0862	1
GMNN	8p-Amp	0.0864	1
BCORL1	Del_3q26.31	0.0865	1
SLC12A6	NEXN	0.0865	1
1q-Amp	Del_1p36.11	0.0866	1
Amp_1q31.1	Del_4p16.2	0.0867	1
Amp_1q31.1	Del_5q21.2	0.0867	1
5q-Del	Del_1p13.2	0.0868	1
CRIPAK	PTEN	0.087	1
BCOR	MPHOSPH10	0.0871	1
13q-Amp	Amp_6p21.1	0.0873	1
13q-Amp	Del_3p26.3	0.0873	1
Amp_16p11.2	Del_18q22.1	0.0873	1
Del_6p25.3	Del_10q25.2	0.0876	1
Del_10q25.2	Del_19p13.3	0.0876	1
NF1	NR1H3	0.0877	1
NF1	DCLK2	0.0877	1
APC	Del_4q22.1	0.0878	1
DIP2B	Del_16q23.1	0.0878	1
Amp_13q12.2	Del_3p26.3	0.0879	1
RNF43	RLIM	0.088	1
SMAD4	Del_4q35.1	0.0881	1
CTNNB1	Del_8q11.1	0.0888	1
FBXW7	Amp_8q24.21	0.0889	1
SELPLG	IQCD	0.089	1
SELPLG	IFT57	0.089	1
SELPLG	ZNF486	0.089	1
MAPK6	RHOA	0.089	1
MAPK6	IQCD	0.089	1
MAPK6	ZNF486	0.089	1
IQCD	C2orf29	0.089	1
IQCD	FKBP9	0.089	1
IQCD	ALDH1A3	0.089	1
IFT57	L1TD1	0.089	1
SLC26A8	ZNF486	0.089	1
RBBP7	Del_10q21.1	0.089	1
L1TD1	ZNF486	0.089	1
ALDH1A3	ZNF486	0.089	1
4p-Del	Amp_16p11.2	0.089	1
Del_8q11.1	Del_10q21.1	0.089	1
ASXL1	PIK3R1	0.0891	1
Del_12p13.1	Del_21q11.2	0.0891	1
Amp_11p15.5	Del_2p12	0.0892	1
ARID1A	Del_16q23.1	0.0895	1
CTNNB1	Amp_12p13.32	0.0895	1
7p-Amp	Del_4p16.2	0.0896	1
Amp_11p15.5	Del_18q22.1	0.0896	1
THOC7	20q-Amp	0.0897	1
14q-Del	Del_8q11.1	0.0897	1
TXNDC2	Amp_5q22.3	0.0899	1
SMAD2	TOP2B	0.0899	1
FBXW7	Del_3p14.2	0.0899	1
17q-Amp	Del_19p13.3	0.0899	1
Del_6p25.3	Del_12p13.1	0.0899	1
Del_12p13.1	Del_19p13.3	0.0899	1
Amp_6p21.1	Amp_20q11.21	0.09	1
8q-Amp	Del_5q12.1	0.0901	1
ARID1A	ALDH1A3	0.0902	1
SOX9	IQCD	0.0902	1
SOX9	ZNF486	0.0902	1
ALG12	Amp_1q31.1	0.0902	1
CHUK	C11orf30	0.0903	1
TPRKB	1q-Amp	0.0904	1
PTGDR	GMNN	0.0905	1
RNF43	SOX9	0.0909	1
SMAD4	PRPS1	0.091	1
APC	PLEKHF2	0.0912	1
APC	VCX2	0.0912	1
Amp_13q22.1	Del_3p26.3	0.0913	1
Del_7q31.1	Del_16q23.1	0.0913	1
Del_16p13.3	Del_16q23.1	0.0914	1
TP53	BIRC3	0.0918	1
14q-Del	Del_5q22.2	0.092	1
EGR1	IDH1	0.0921	1
ST3GAL6	IDH1	0.0921	1
VCX2	IDH1	0.0921	1
NF1	Del_5q22.2	0.0924	1
9p-Amp	Amp_20p11.21	0.0924	1
FMN2	PRRG1	0.0925	1
NF2	RHOA	0.0925	1
FAM9A	C11orf30	0.0925	1
EGR1	SETD2	0.0925	1
CHUK	RSPH3	0.0925	1
GRB2	C11orf30	0.0925	1
C11orf30	RSPH3	0.0925	1
APC	PRKDC	0.0926	1
ZFP36L2	SMAD4	0.0927	1
SMAD4	RBBP7	0.0927	1
1p-Del	Del_8p22	0.0929	1
MGA	PLAGL2	0.093	1
12p-Amp	Del_2p12	0.093	1
ALPK2	SMAD4	0.0933	1
PTGDR	Del_5q22.2	0.0933	1
18p-Del	Del_2q22.1	0.0933	1
Del_5q12.1	Del_16q23.1	0.0934	1
5q-Del	8p-Del	0.0937	1
8p-Del	Amp_19p13.2	0.0937	1
ALG12	Amp_8p11.23	0.0938	1
C14orf184	Amp_8p11.23	0.0938	1
Amp_2q33.1	Amp_20q11.21	0.0938	1
ERBB2	NR1H3	0.0939	1
ERBB2	PCBP1	0.0939	1
ERBB2	DCLK2	0.0939	1
ERBB2	FYN	0.0939	1
ERBB2	GPATCH8	0.0939	1
16q-Amp	Amp_17q24.1	0.0939	1
MLH1	DCLK2	0.094	1
MLH1	GPATCH8	0.094	1
Del_2p12	Del_18q22.1	0.094	1
7p-Amp	14q-Del	0.0941	1
ZFP36L2	STARD3NL	0.0942	1
ZFP36L2	NR1H3	0.0942	1
ZFP36L2	GPATCH8	0.0942	1
STARD3NL	RPTN	0.0942	1
STARD3NL	RBBP7	0.0942	1
STARD3NL	HLA-A	0.0942	1
RPTN	NR1H3	0.0942	1
RPTN	DCLK2	0.0942	1
RPTN	GPATCH8	0.0942	1
P2RY13	RBBP7	0.0942	1
PCBP1	RBBP7	0.0942	1
PCBP1	HLA-A	0.0942	1
RBBP7	DCLK2	0.0942	1
DCLK2	HLA-A	0.0942	1
HLA-A	FYN	0.0942	1
TP53	Del_1p13.2	0.0943	1
CDH1	ALDH1A3	0.0946	1
DIP2B	MPHOSPH10	0.0946	1
RLIM	LARP4B	0.0946	1
MPHOSPH10	LARP4B	0.0946	1
B2M	RBPJ	0.0949	1
B2M	GMPS	0.0949	1
TPRKB	ROS1	0.0949	1
DDX26B	RBPJ	0.0949	1
20p-Amp	Del_10q25.2	0.095	1
20p-Del	Del_5q22.2	0.095	1
RLIM	CREBBP	0.0951	1
MPHOSPH10	CREBBP	0.0951	1
1p-Del	Del_15q22.33	0.0951	1
Amp_17q24.1	Del_6p25.3	0.0952	1
Amp_17q24.1	Del_6q26	0.0952	1
Amp_13q12.2	Del_16p13.3	0.0954	1
CDK12	KDM6A	0.0955	1
RB1	GMPS	0.0956	1
2q-Amp	Amp_20p11.21	0.0958	1
Amp_13q12.13	Del_10q21.1	0.0958	1
FAM9A	PIK3R1	0.0959	1
THOC7	8p-Amp	0.0959	1
GRB2	8p-Amp	0.0959	1
PIK3R1	RSPH3	0.0959	1
7p-Amp	Del_5q12.1	0.0959	1
ZFP36L2	CDK12	0.0961	1
RPTN	CDK12	0.0961	1
20p-Del	Del_8q11.1	0.0961	1
Amp_17q12	Del_8p23.2	0.0962	1
Amp_2q33.1	Del_14q31.1	0.0965	1
Del_3q26.31	Del_14q31.1	0.0965	1
THOC7	Amp_20q11.21	0.0966	1
TPRKB	NLRC4	0.0968	1
TPRKB	BCORL1	0.0968	1
BCL9	HIST1H1T	0.0968	1
15q-Del	Del_7q31.1	0.097	1
BCOR	PRPS1	0.0971	1
20p-Del	8p-Del	0.0972	1
FAM123B	NF2	0.0973	1
SELPLG	ALPK2	0.0974	1
MAPK6	ASXL1	0.0974	1
RHOA	ATXN3L	0.0974	1
BCL9	IDH1	0.0974	1
IFT57	Del_3q26.31	0.0974	1
CRIPAK	Del_17q24.3	0.0975	1
PLEKHF2	ALPK2	0.0975	1
ASXL1	VCX2	0.0975	1
APC	FMN2	0.0976	1
APC	15q-Del	0.0976	1
ARID1A	DCLK2	0.0978	1
B2M	ROS1	0.0979	1
4p-Del	Amp_1q31.1	0.098	1
Amp_16p11.2	Del_18q21.2	0.0985	1
RNF43	8p-Amp	0.0988	1
FAM123B	STARD3NL	0.0989	1
FAM123B	FYN	0.0989	1
1q-Amp	Del_10q25.2	0.0989	1
1q-Amp	Amp_5q22.3	0.0991	1
APC	ATXN3L	0.0993	1
APC	Amp_19p13.2	0.0993	1
BCOR	MAPK6	0.0994	1
Del_2p12	Del_18q21.2	0.0994	1
21q-Del	Amp_13q22.1	0.0995	1
Del_14q11.2	Del_17q24.3	0.0995	1
20p-Del	Amp_13q12.2	0.0996	1
GRB2	TOP2B	0.0997	1
RSPH3	Del_6p25.3	0.0997	1
4p-Del	Del_3q26.31	0.0997	1
Del_2q22.1	Del_6p25.3	0.0997	1
Del_2q22.1	Del_19p13.3	0.0997	1
CRIPAK	ATM	0.0998	1
MLH1	BMPR2	0.0998	1
Del_1p33	Del_5q12.1	0.0998	1
SMAD2	EGR1	0.0999	1
EGR1	Amp_5q22.3	0.0999	1
VCX2	Amp_5q22.3	0.0999	1
VCX2	Del_12p13.1	0.0999	1
ARID1A	TXNDC2	0.1	1
GGT1	GMNN	0.1	1
EGR1	NF1	0.1	1
TPRKB	GMNN	0.1	1
HIST1H1T	GMNN	0.1	1
Amp_6p21.1	Del_19p13.3	0.1	1
FAM123B	MAP4K3	0.101	1
SOX9	LARP4B	0.101	1
MAPK6	MVK	0.101	1
MAPK6	BIRC3	0.101	1
RHOA	FBXW7	0.101	1
PRKDC	IQCD	0.101	1
PRKDC	ZNF486	0.101	1
FBXW7	IQCD	0.101	1
MVK	FKBP9	0.101	1
PRRG1	SLC26A8	0.101	1
PRRG1	L1TD1	0.101	1
PRRG1	FKBP9	0.101	1
PRRG1	ALDH1A3	0.101	1
C2orf29	BIRC3	0.101	1
FKBP9	BIRC3	0.101	1
FKBP9	Amp_10q22.3	0.101	1
16p-Amp	Amp_8q24.21	0.101	1
14q-Del	Del_16q23.1	0.101	1
Del_3p14.2	Del_16q23.1	0.101	1
Del_4q35.1	Del_6p25.3	0.101	1
Del_16q23.1	Del_21q11.2	0.101	1
APC	Del_15q22.33	0.102	1
TP53	MLH1	0.102	1
MGA	CTNNB1	0.102	1
PTCH1	Amp_1q31.1	0.102	1
ROS1	GMNN	0.102	1
CTNNB1	12p-Amp	0.102	1
7q-Amp	Del_4q35.1	0.102	1
8q-Amp	9p-Amp	0.102	1
Amp_8q24.21	Del_15q15.2	0.102	1
ARID1A	WNT1	0.103	1
ARID1A	ALG12	0.103	1
ARID1A	RSPH3	0.103	1
DIP2B	PTGDR	0.103	1
18p-Del	Del_6p25.3	0.103	1
18p-Del	Del_6q26	0.103	1
21q-Del	Amp_6p21.1	0.103	1
21q-Del	Del_3p26.3	0.103	1
Del_1p33	Del_6p25.3	0.103	1
RNF43	C2orf29	0.104	1
STARD3NL	MPHOSPH10	0.104	1
P2RY13	MPHOSPH10	0.104	1
ALPK2	KDM6A	0.104	1
PCBP1	MPHOSPH10	0.104	1
RSPH3	ATM	0.104	1
RLIM	FYN	0.104	1
MPHOSPH10	DCLK2	0.104	1
MPHOSPH10	FYN	0.104	1
2q-Amp	Amp_13q22.1	0.104	1
7p-Amp	Del_3q26.31	0.104	1
18p-Del	Amp_11p15.5	0.104	1
22q-Del	Del_3p14.2	0.104	1
Amp_11p15.5	Del_18q21.2	0.104	1
ZFP36L2	DDX26B	0.105	1
ZFP36L2	GMPS	0.105	1
B2M	PTEN	0.105	1
B2M	HLA-A	0.105	1
BCOR	PRKDC	0.105	1
OR4D10	RPTN	0.105	1
OR4D10	PTEN	0.105	1
RPTN	DDX26B	0.105	1
RPTN	RBPJ	0.105	1
DDX26B	RBBP7	0.105	1
RBPJ	HLA-A	0.105	1
HLA-A	GMPS	0.105	1
18q-Del	Amp_10q22.3	0.105	1
8p-Del	Del_2p12	0.105	1
APC	Del_17p12	0.106	1
CDH1	C14orf184	0.106	1
RHOA	ZBTB20	0.106	1
RPTN	Del_4p16.2	0.106	1
ATXN3L	SETD2	0.106	1
IFT57	MAP4K3	0.106	1
16p-Amp	8q-Amp	0.106	1
9p-Amp	21q-Del	0.106	1
20p-Del	Del_10q23.31	0.106	1
Amp_2q33.1	Del_4q22.1	0.106	1
Amp_19p13.2	Del_4q22.1	0.106	1
Amp_20q13.31	Del_19p13.3	0.106	1
APC	Del_8p22	0.107	1
ACVR1B	MAP4K3	0.107	1
CDH1	FAM9A	0.107	1
TPRKB	CTNNB1	0.107	1
BCORL1	CTNNB1	0.107	1
MAP4K3	KDM6A	0.107	1
14q-Del	Amp_6p21.1	0.107	1
APC	KDM6A	0.108	1
TP53	Amp_8p11.23	0.108	1
SOX9	MVK	0.108	1
SELPLG	DIP2B	0.108	1
EGR1	CHUK	0.108	1
EGR1	C11orf30	0.108	1
CHUK	ST3GAL6	0.108	1
PLAGL2	PTGDR	0.108	1
C11orf30	VCX2	0.108	1
DIP2B	ALDH1A3	0.108	1
SMAD4	BCORL1	0.108	1
Amp_6p21.1	Amp_8p11.21	0.108	1
Del_2p12	Del_7q31.1	0.108	1
Del_3p14.2	Del_18q21.2	0.108	1
P2RY13	Del_5q22.2	0.109	1
17p-Del	Del_7q31.1	0.109	1
Amp_8p11.23	Del_18p11.31	0.109	1
Del_7q31.1	Del_10q21.1	0.109	1
APC	Amp_8p11.23	0.11	1
APC	Del_14q31.1	0.11	1
FMN2	FBXW7	0.11	1
THOC7	GMNN	0.11	1
FBXW7	CDK12	0.11	1
ERBB2	RBPJ	0.11	1
GRB2	GMNN	0.11	1
RSPH3	GMNN	0.11	1
MPHOSPH10	CDK12	0.11	1
15q-Del	Amp_8q12.1	0.11	1
Amp_1q31.1	Del_10q25.2	0.11	1
Amp_6p21.1	Del_8p22	0.11	1
Amp_13q22.1	Del_17q24.3	0.11	1
Amp_19p13.2	Del_18q21.2	0.11	1
SMAD2	CTNNB1	0.111	1
ATXN3L	PRRG1	0.111	1
ATXN3L	BIRC3	0.111	1
C14orf184	2p-Amp	0.111	1
C14orf184	6p-Amp	0.111	1
NEXN	BIRC3	0.111	1
BIRC3	Amp_2q33.1	0.111	1
BIRC3	Del_3q26.31	0.111	1
CTNNB1	Del_12p13.1	0.111	1
2q-Amp	6p-Amp	0.111	1
Amp_10q22.3	Amp_19p13.2	0.111	1
Amp_10q22.3	Del_3q26.31	0.111	1
Amp_20q13.31	Del_5q22.2	0.111	1
Del_5q22.2	Del_14q31.1	0.111	1
Del_6p25.3	Del_19p13.3	0.111	1
APC	RSPH3	0.112	1
APC	Amp_20p11.21	0.112	1
CRIPAK	ATXN3L	0.112	1
CRIPAK	Amp_19p13.2	0.112	1
CRIPAK	Del_3q26.31	0.112	1
RNF43	ACVR1B	0.112	1
THOC7	Amp_20q12	0.112	1
SMAD4	CDK12	0.112	1
8q-Amp	15q-Del	0.112	1
Amp_6p21.1	Amp_20q12	0.112	1
Amp_11p15.5	Del_10q23.31	0.112	1
Del_5q21.2	Del_6q26	0.112	1
TP53	NF2	0.113	1
STARD3NL	Del_10q23.31	0.113	1
NF1	PTGDR	0.113	1
17q-Amp	18q-Del	0.113	1
Amp_17q12	Del_3q26.31	0.113	1
Del_6p25.3	Del_22q13.32	0.113	1
B2M	MLH1	0.114	1
ACVR1B	NF1	0.114	1
FMN2	P2RY13	0.114	1
FMN2	GPATCH8	0.114	1
STARD3NL	C2orf29	0.114	1
STARD3NL	FKBP9	0.114	1
SELPLG	NR1H3	0.114	1
SELPLG	FYN	0.114	1
SELPLG	GPATCH8	0.114	1
MAPK6	P2RY13	0.114	1
MAPK6	PCBP1	0.114	1
FAM9A	NLRC4	0.114	1
FAM9A	BCORL1	0.114	1
BCL9	RSPH3	0.114	1
P2RY13	SLC26A8	0.114	1
NR1H3	L1TD1	0.114	1
NR1H3	FKBP9	0.114	1
NR1H3	ALDH1A3	0.114	1
GRB2	NLRC4	0.114	1
GRB2	SLC12A6	0.114	1
C2orf29	FYN	0.114	1
SLC26A8	DCLK2	0.114	1
SLC26A8	GPATCH8	0.114	1
L1TD1	GPATCH8	0.114	1
DCLK2	FKBP9	0.114	1
FKBP9	GPATCH8	0.114	1
FYN	ALDH1A3	0.114	1
ALDH1A3	GPATCH8	0.114	1
BCORL1	Del_2q22.1	0.114	1
16p-Amp	8p-Del	0.114	1
20p-Amp	Del_4p16.2	0.114	1
5q-Del	Amp_20q12	0.114	1
Amp_8p11.21	Amp_16p11.2	0.114	1
Amp_19p13.2	Amp_20q12	0.114	1
TP53	21q-Del	0.115	1
SMAD2	ZNF486	0.115	1
ALDH1A3	CREBBP	0.115	1
2p-Amp	Amp_1q31.1	0.115	1
2q-Amp	Amp_13q12.13	0.115	1
6p-Amp	Amp_1q31.1	0.115	1
21q-Del	Del_2q22.1	0.115	1
Amp_12p13.32	Amp_13q12.13	0.115	1
Del_1p13.2	Del_12p13.1	0.115	1
CRIPAK	FBXW7	0.116	1
B2M	NF1	0.116	1
B2M	MPHOSPH10	0.116	1
TXNDC2	EGR1	0.116	1
OR4D10	MPHOSPH10	0.116	1
NF1	RBPJ	0.116	1
ZBTB20	Del_16q23.1	0.116	1
ERBB2	ALPK2	0.116	1
ERBB2	Amp_17q12	0.116	1
ST3GAL6	TOP2B	0.116	1
ST3GAL6	Del_6p25.3	0.116	1
RLIM	DDX26B	0.116	1
RLIM	RBPJ	0.116	1
MPHOSPH10	DDX26B	0.116	1
MPHOSPH10	GMPS	0.116	1
1q-Amp	Del_1p33	0.116	1
Amp_1q31.1	Amp_17q12	0.116	1
Amp_10q22.3	Del_4q35.1	0.116	1
Amp_13q12.13	Del_16p13.3	0.116	1
Amp_17q24.1	Del_14q11.2	0.116	1
Amp_20q12	Del_8q11.1	0.116	1
APC	ALDH1A3	0.117	1
BCOR	HIST1H1T	0.117	1
NF2	PTGDR	0.117	1
RPTN	ROS1	0.117	1
ASXL1	Del_16q23.1	0.117	1
IQCD	ASXL1	0.118	1
ASXL1	IFT57	0.118	1
16p-Amp	17p-Del	0.118	1
18p-Del	Amp_8p11.23	0.118	1
Del_5q12.1	Del_17q24.3	0.118	1
FAM123B	SMAD2	0.119	1
SOX9	PIK3R1	0.119	1
ZFP36L2	PTCH1	0.119	1
ACVR1B	FMN2	0.119	1
FMN2	IDH1	0.119	1
PLEKHF2	PIK3R1	0.119	1
SMAD4	GPATCH8	0.119	1
20q-Amp	Del_5q22.2	0.119	1
Del_8q11.1	Del_10q25.2	0.119	1
MVK	IDH1	0.12	1
BCL9	ERBB2	0.12	1
ZBTB20	BIRC3	0.12	1
ERBB2	SLC12A6	0.12	1
PRRG1	MAP4K3	0.12	1
RSPH3	ROS1	0.12	1
Amp_8q24.21	Del_15q21.1	0.12	1
FBXW7	SLC12A6	0.121	1
CHUK	NLRC4	0.121	1
ATXN3L	DIP2B	0.121	1
PLAGL2	8p-Amp	0.121	1
C11orf30	BCORL1	0.121	1
C11orf30	SLC12A6	0.121	1
PRRG1	12p-Amp	0.121	1
BCORL1	8p-Amp	0.121	1
5q-Del	Del_17q24.3	0.121	1
Amp_10q22.3	Del_15q22.33	0.121	1
Amp_11p15.5	Del_8p23.2	0.121	1
Del_3q26.31	Del_17q24.3	0.121	1
Del_7q31.1	Del_15q22.33	0.121	1
ST3GAL6	Amp_8p11.23	0.122	1
BCORL1	Amp_8p11.23	0.122	1
16q-Amp	Del_8p23.2	0.122	1
20p-Amp	Amp_1q31.1	0.122	1
Del_5q12.1	Del_10q23.31	0.122	1
TP53	GMNN	0.123	1
FAM123B	PTEN	0.123	1
WNT1	12p-Amp	0.123	1
VCX2	PTEN	0.123	1
12p-Amp	17q-Amp	0.123	1
TP53	Del_15q21.1	0.124	1
BCOR	PTCH1	0.124	1
SELPLG	8p-Amp	0.124	1
CHUK	IQCD	0.124	1
PIK3R1	ALDH1A3	0.124	1
LARP4B	HIST1H1T	0.124	1
13q-Amp	6p-Amp	0.124	1
7p-Amp	Del_6p25.3	0.124	1
Amp_13q12.2	Del_5q21.2	0.124	1
Amp_13q12.2	Del_10q25.2	0.124	1
APC	BCL9	0.125	1
APC	NLRC4	0.125	1
APC	SLC12A6	0.125	1
RNF43	RHOA	0.125	1
STARD3NL	Amp_19p13.2	0.125	1
STARD3NL	Del_3q26.31	0.125	1
ATXN3L	PCBP1	0.125	1
ATXN3L	DCLK2	0.125	1
ATXN3L	GPATCH8	0.125	1
PCBP1	NEXN	0.125	1
PCBP1	Amp_2q33.1	0.125	1
DCLK2	NEXN	0.125	1
CRIPAK	IDH1	0.126	1
TXNDC2	Del_21q11.2	0.126	1
FMN2	HIST1H1T	0.126	1
FBXW7	C11orf30	0.126	1
VCX2	Del_15q11.2	0.126	1
20p-Amp	2p-Amp	0.126	1
14q-Del	Del_6q26	0.126	1
14q-Del	Del_19p13.3	0.126	1
Amp_5q22.3	Amp_12p13.32	0.126	1
Amp_12p13.32	Del_12p13.1	0.126	1
Amp_20q11.21	Del_16p13.3	0.126	1
APC	Del_5q21.2	0.127	1
SOX9	P2RY13	0.127	1
SOX9	FYN	0.127	1
ERBB2	RBBP7	0.127	1
ERBB2	16p-Amp	0.127	1
CDK12	Del_4p16.2	0.127	1
16p-Amp	Amp_1q31.1	0.127	1
8q-Amp	17p-Del	0.127	1
20p-Del	Del_5q21.2	0.127	1
B2M	ALDH1A3	0.128	1
SELPLG	RBPJ	0.128	1
OR4D10	SLC26A8	0.128	1
ZBTB20	RB1	0.128	1
DIP2B	Del_3p14.2	0.128	1
C2orf29	GMPS	0.128	1
DDX26B	SLC26A8	0.128	1
DDX26B	FKBP9	0.128	1
RBPJ	L1TD1	0.128	1
RBPJ	FKBP9	0.128	1
1q-Amp	Del_5q21.2	0.128	1
7q-Amp	20p-Del	0.128	1
Amp_5q22.3	Del_15q15.2	0.128	1
Amp_12p13.32	Amp_13q12.2	0.128	1
ZFP36L2	MPHOSPH10	0.129	1
CDH1	OR4D10	0.129	1
CDH1	GMPS	0.129	1
THOC7	Amp_20q13.31	0.129	1
RLIM	HLA-A	0.129	1
MPHOSPH10	RBBP7	0.129	1
2p-Amp	Del_14q11.2	0.129	1
17p-Del	Amp_19p13.2	0.129	1
20p-Del	Del_17q24.3	0.129	1
Amp_17q12	Del_1p33	0.129	1
CRIPAK	FAM123B	0.13	1
TP53	PRPS1	0.13	1
TP53	PTGDR	0.13	1
TP53	Del_3q26.31	0.13	1
MLH1	C11orf30	0.13	1
FAM9A	PLAGL2	0.13	1
GRB2	PLAGL2	0.13	1
GRB2	Del_16q23.1	0.13	1
Amp_10q22.3	Del_18q12.2	0.13	1
APC	Del_15q15.2	0.131	1
NF2	ATXN3L	0.131	1
FBXW7	ATXN3L	0.131	1
ATXN3L	Del_10q21.1	0.131	1
ZBTB20	ASXL1	0.131	1
ALPK2	IDH1	0.131	1
Amp_2q33.1	Del_10q21.1	0.131	1
Amp_6p21.1	Amp_11p15.5	0.131	1
Amp_8q12.1	Amp_19p13.2	0.131	1
CRIPAK	ALPK2	0.132	1
ACVR1B	CHUK	0.132	1
CDH1	DIP2B	0.132	1
C11orf30	KDM6A	0.132	1
Amp_16p11.2	Del_3p26.3	0.132	1
TXNDC2	BCORL1	0.133	1
WNT1	SETD2	0.133	1
RHOA	Del_6p25.3	0.133	1
EGR1	BCORL1	0.133	1
ST3GAL6	BCORL1	0.133	1
IQCD	TOP2B	0.133	1
PLEKHF2	NLRC4	0.133	1
NLRC4	TOP2B	0.133	1
PTEN	HIST1H1T	0.133	1
SLC12A6	Del_6p25.3	0.133	1
12p-Amp	Amp_13q12.13	0.133	1
ERBB2	Amp_16p11.2	0.134	1
SETD2	BIRC3	0.134	1
14q-Del	Del_7q31.1	0.134	1
17p-Del	Amp_8p11.21	0.134	1
Amp_1q31.1	Amp_16p11.2	0.134	1
Del_7q31.1	Del_10q25.2	0.134	1
ARID1A	IDH1	0.135	1
ZBTB20	DCLK2	0.135	1
ZBTB20	FYN	0.135	1
NR1H3	Amp_11p15.5	0.135	1
GPATCH8	MAP4K3	0.135	1
CTNNB1	2q-Amp	0.135	1
Amp_5q22.3	Del_15q21.1	0.135	1
Amp_8q12.1	Del_5q12.1	0.135	1
MLH1	FAM9A	0.136	1
RPTN	FBXW7	0.136	1
LARP4B	MAP4K3	0.136	1
LARP4B	IDH1	0.136	1
20p-Amp	Del_2p12	0.136	1
7q-Amp	Del_2q22.1	0.136	1
APC	GGT1	0.137	1
APC	TPRKB	0.137	1
APC	MPHOSPH10	0.137	1
SMAD4	KDM6A	0.137	1
SLC26A8	PTEN	0.137	1
PTEN	ALDH1A3	0.137	1
9p-Amp	Del_21q11.2	0.137	1
CRIPAK	FAM9A	0.138	1
TP53	PTCH1	0.138	1
BCOR	RSPH3	0.138	1
WNT1	ALPK2	0.138	1
GGT1	2q-Amp	0.138	1
GGT1	20p-Del	0.138	1
NF2	BCORL1	0.138	1
NF1	Amp_12p13.32	0.138	1
TPRKB	ALG12	0.138	1
TPRKB	CDK12	0.138	1
ALPK2	ALG12	0.138	1
PRRG1	GMNN	0.138	1
SMAD4	Del_10q23.31	0.138	1
BIRC3	GMNN	0.138	1
HIST1H1T	20p-Del	0.138	1
Amp_2q33.1	Amp_13q12.2	0.138	1
Del_8p23.2	Del_10q25.2	0.138	1
OR4D10	ATXN3L	0.139	1
FBXW7	MVK	0.139	1
FBXW7	Amp_10q22.3	0.139	1
DDX26B	NEXN	0.139	1
20p-Amp	4p-Del	0.139	1
20p-Amp	Del_3p14.2	0.139	1
8p-Del	Amp_10q22.3	0.139	1
Amp_11p15.5	Del_14q31.1	0.139	1
CDH1	EGR1	0.14	1
CDH1	PLEKHF2	0.14	1
CDH1	VCX2	0.14	1
FMN2	Del_12p13.1	0.14	1
FBXW7	GRB2	0.14	1
CHUK	MGA	0.14	1
CHUK	PRRG1	0.14	1
C11orf30	BIRC3	0.14	1
SMAD4	HIST1H1T	0.14	1
Amp_6p21.1	Amp_10q22.3	0.14	1
Amp_11p15.5	Amp_13q22.1	0.14	1
Del_3p26.3	Del_5q12.1	0.14	1
CRIPAK	RNF43	0.141	1
FAM123B	RSPH3	0.141	1
ZFP36L2	SELPLG	0.141	1
SELPLG	HLA-A	0.141	1
RPTN	SLC26A8	0.141	1
RPTN	FKBP9	0.141	1
ST3GAL6	PLAGL2	0.141	1
ASXL1	BIRC3	0.141	1
PLAGL2	VCX2	0.141	1
C2orf29	RBBP7	0.141	1
RBBP7	ALDH1A3	0.141	1
20p-Del	Amp_8p11.21	0.141	1
20p-Del	Amp_19p13.2	0.141	1
Amp_8p11.23	Del_12p13.1	0.141	1
ACVR1B	ST3GAL6	0.142	1
FBXW7	DIP2B	0.142	1
MGA	P2RY13	0.142	1
PLEKHF2	KDM6A	0.142	1
8p-Del	Amp_12p13.32	0.142	1
Amp_8p11.21	Amp_17q24.1	0.142	1
Del_3p14.2	Del_10q21.1	0.142	1
TP53	Del_5q12.1	0.143	1
FAM123B	RPTN	0.143	1
FAM123B	HLA-A	0.143	1
RHOA	PIK3R1	0.143	1
RPTN	ATM	0.143	1
C11orf30	Del_16q23.1	0.143	1
PIK3R1	ZNF486	0.143	1
PIK3R1	Del_3q26.31	0.143	1
C2orf29	BMPR2	0.143	1
14q-Del	Amp_17q24.1	0.143	1
Amp_8p11.23	Amp_16p11.2	0.143	1
MGA	8p-Amp	0.144	1
DCLK2	CTNNB1	0.144	1
GPATCH8	CTNNB1	0.144	1
17q-Amp	8p-Del	0.144	1
8p-Amp	Del_5q12.1	0.144	1
Del_3q26.31	Del_22q13.32	0.144	1
TP53	Del_3p26.3	0.145	1
TXNDC2	KDM6A	0.145	1
TOP2B	KDM6A	0.145	1
1p-Del	Amp_13q12.2	0.145	1
Amp_6p21.1	Del_1p36.11	0.145	1
Amp_8q24.21	Del_3p26.3	0.145	1
Amp_13q22.1	Del_10q21.1	0.145	1
Amp_19p13.2	Del_18q12.2	0.145	1
SMAD2	PCBP1	0.146	1
SMAD2	DCLK2	0.146	1
THOC7	DIP2B	0.146	1
THOC7	LARP4B	0.146	1
BCL9	CREBBP	0.146	1
DIP2B	Del_2q22.1	0.146	1
RSPH3	LARP4B	0.146	1
DCLK2	Amp_5q22.3	0.146	1
16q-Amp	17q-Amp	0.146	1
20p-Del	Del_5q12.1	0.146	1
Amp_20q11.21	Del_19p13.3	0.146	1
ARID1A	ERBB2	0.147	1
ARID1A	ASXL1	0.147	1
CRIPAK	Del_5q22.2	0.147	1
STARD3NL	GMNN	0.147	1
FYN	GMNN	0.147	1
PTGDR	Del_1p33	0.147	1
GMNN	16q-Amp	0.147	1
7q-Amp	Del_19p13.3	0.147	1
Amp_5q22.3	Del_15q11.2	0.147	1
Amp_12p13.32	Del_2q22.1	0.147	1
Del_12p13.1	Del_15q11.2	0.147	1
SOX9	RBPJ	0.148	1
STARD3NL	CREBBP	0.148	1
P2RY13	8q-Amp	0.148	1
PLEKHF2	ROS1	0.148	1
DCLK2	CREBBP	0.148	1
CREBBP	GMNN	0.148	1
Amp_11p15.5	Del_21q11.2	0.148	1
GGT1	Del_17p12	0.149	1
NR1H3	Del_3p14.2	0.149	1
16q-Amp	4p-Del	0.149	1
21q-Del	Del_4q22.1	0.149	1
4p-Del	Amp_6p21.1	0.149	1
TXNDC2	MLH1	0.15	1
WNT1	FAM9A	0.15	1
FAM9A	ALG12	0.15	1
EGR1	Del_16q23.1	0.15	1
THOC7	ALG12	0.15	1
GRB2	C14orf184	0.15	1
RSPH3	C14orf184	0.15	1
RSPH3	2q-Amp	0.15	1
SLC12A6	Del_10q23.31	0.15	1
2q-Amp	Del_2q22.1	0.15	1
Del_15q15.2	Del_16q23.1	0.15	1
SMAD2	LARP4B	0.151	1
OR4D10	MAP4K3	0.151	1
ZBTB20	GMPS	0.151	1
RBPJ	IDH1	0.151	1
GMPS	IDH1	0.151	1
8q-Amp	20p-Del	0.151	1
9p-Amp	Del_12p13.1	0.151	1
1p-Del	Del_8p23.2	0.151	1
1p-Del	Del_15q15.2	0.151	1
Amp_10q22.3	Del_6q26	0.151	1
Amp_20q12	Del_16p13.3	0.151	1
SOX9	BMPR2	0.152	1
RHOA	BCL9	0.152	1
RHOA	PLAGL2	0.152	1
BCL9	IQCD	0.152	1
IQCD	SLC12A6	0.152	1
GRB2	Del_5q22.2	0.152	1
NLRC4	IFT57	0.152	1
SLC12A6	ZNF486	0.152	1
16p-Amp	Del_10q23.31	0.152	1
Amp_17q24.1	Del_18q12.2	0.152	1
Del_2q22.1	Del_5q22.2	0.152	1
TPRKB	BMPR2	0.153	1
ST3GAL6	ATM	0.153	1
IQCD	SMAD4	0.153	1
21q-Del	Del_16p13.3	0.153	1
CRIPAK	CHUK	0.154	1
ZFP36L2	ATXN3L	0.154	1
ZFP36L2	Del_3q26.31	0.154	1
BCOR	C11orf30	0.154	1
NF2	MAP4K3	0.154	1
NF2	IDH1	0.154	1
RPTN	ATXN3L	0.154	1
ATXN3L	HLA-A	0.154	1
RBBP7	Del_3q26.31	0.154	1
HLA-A	Amp_19p13.2	0.154	1
HLA-A	Del_3q26.31	0.154	1
CTNNB1	Del_1p33	0.154	1
15q-Del	Amp_8q24.21	0.154	1
Del_2p12	Del_18p11.31	0.154	1
MAPK6	MPHOSPH10	0.155	1
PRKDC	16q-Amp	0.155	1
ALG12	ATM	0.155	1
RLIM	ALDH1A3	0.155	1
MPHOSPH10	L1TD1	0.155	1
MPHOSPH10	FKBP9	0.155	1
13q-Amp	Amp_12p13.32	0.155	1
Amp_6p21.1	Del_8p23.2	0.155	1
Amp_13q12.2	Del_5q22.2	0.155	1
Del_3p14.2	Del_15q15.2	0.155	1
Del_8q11.1	Del_18p11.31	0.155	1
CRIPAK	FMN2	0.156	1
GGT1	2p-Amp	0.156	1
TPRKB	CREBBP	0.156	1
TPRKB	6p-Amp	0.156	1
GMPS	GMNN	0.156	1
HIST1H1T	Del_15q22.33	0.156	1
Amp_1q31.1	Del_5q22.2	0.156	1
Del_10q21.1	Del_21q11.2	0.156	1
ZFP36L2	Del_5q22.2	0.157	1
TXNDC2	MGA	0.157	1
RPTN	Del_5q22.2	0.157	1
CHUK	PCBP1	0.157	1
CHUK	DCLK2	0.157	1
CHUK	FYN	0.157	1
ATXN3L	ATM	0.157	1
TPRKB	Amp_8p11.21	0.157	1
NR1H3	SETD2	0.157	1
16q-Amp	Amp_6p21.1	0.157	1
7q-Amp	5q-Del	0.157	1
7q-Amp	Del_3q26.31	0.157	1
9p-Amp	Amp_12p13.32	0.157	1
1p-Del	Del_15q21.1	0.157	1
Amp_1q31.1	Amp_8q24.21	0.157	1
Amp_6p21.1	Del_18q22.1	0.157	1
Del_5q12.1	Del_6q26	0.157	1
Del_6q26	Del_16q23.1	0.157	1
FAM123B	TOP2B	0.158	1
TXNDC2	FBXW7	0.158	1
FMN2	THOC7	0.158	1
THOC7	15q-Del	0.158	1
ERBB2	PIK3R1	0.158	1
PIK3R1	Del_3p14.2	0.158	1
VCX2	8q-Amp	0.158	1
PRPS1	PTGDR	0.158	1
7p-Amp	20p-Del	0.158	1
8p-Amp	Amp_17q24.1	0.158	1
14q-Del	Del_3q26.31	0.158	1
Del_3q26.31	Del_21q11.2	0.158	1
CRIPAK	EGR1	0.159	1
CRIPAK	ST3GAL6	0.159	1
BCOR	ST3GAL6	0.159	1
WNT1	PIK3R1	0.159	1
C14orf184	8p-Amp	0.159	1
1q-Amp	Amp_16p11.2	0.159	1
9p-Amp	18p-Del	0.159	1
9p-Amp	Amp_20q12	0.159	1
18q-Del	Del_2q22.1	0.159	1
Amp_13q12.2	Amp_17q24.1	0.159	1
Del_1p33	Del_16q23.1	0.159	1
Del_6p25.3	Del_18p11.31	0.159	1
APC	RBBP7	0.16	1
B2M	SMAD4	0.16	1
MLH1	RLIM	0.16	1
MLH1	MPHOSPH10	0.16	1
WNT1	PTCH1	0.16	1
GGT1	Del_22q13.32	0.161	1
PRKDC	TPRKB	0.161	1
IDH1	CREBBP	0.161	1
Amp_8q24.21	Del_10q21.1	0.161	1
Amp_17q12	Del_8p22	0.161	1
Del_1p36.11	Del_7q31.1	0.161	1
Del_7q31.1	Del_10q23.31	0.161	1
ACVR1B	RHOA	0.162	1
THOC7	CDK12	0.162	1
IFT57	KDM6A	0.162	1
RSPH3	CDK12	0.162	1
B2M	SMAD2	0.163	1
SMAD2	DDX26B	0.163	1
SMAD2	GMPS	0.163	1
WNT1	VCX2	0.163	1
EGR1	ALG12	0.163	1
MVK	PLAGL2	0.163	1
ERBB2	C2orf29	0.163	1
ERBB2	FKBP9	0.163	1
ERBB2	ALDH1A3	0.163	1
ST3GAL6	ALG12	0.163	1
PLEKHF2	ALG12	0.163	1
PLAGL2	BIRC3	0.163	1
VCX2	7p-Amp	0.163	1
L1TD1	Amp_17q24.1	0.163	1
CRIPAK	NF1	0.164	1
TP53	VCX2	0.164	1
SOX9	PTEN	0.164	1
ZFP36L2	15q-Del	0.164	1
OR4D10	MGA	0.164	1
ALG12	RB1	0.164	1
PIK3R1	MAP4K3	0.164	1
CTNNB1	Amp_11p15.5	0.164	1
Amp_5q22.3	Del_8p22	0.164	1
CRIPAK	Del_4q22.1	0.165	1
GGT1	17p-Del	0.165	1
MAPK6	SMAD4	0.165	1
NF1	8q-Amp	0.165	1
NR1H3	ASXL1	0.165	1
ASXL1	FYN	0.165	1
C2orf29	SMAD4	0.165	1
SMAD4	4q-Del	0.165	1
20p-Amp	Del_15q15.2	0.165	1
Amp_12p13.32	Del_2p12	0.165	1
Del_2p12	Del_17p12	0.165	1
Del_3p14.2	Del_15q21.1	0.165	1
ARID1A	ACVR1B	0.166	1
ZFP36L2	MAP4K3	0.166	1
MLH1	EGR1	0.166	1
MLH1	ST3GAL6	0.166	1
FMN2	Amp_1q31.1	0.166	1
RPTN	ZBTB20	0.166	1
ZBTB20	HLA-A	0.166	1
PCBP1	PTEN	0.166	1
PTEN	FYN	0.166	1
HLA-A	IDH1	0.166	1
12p-Amp	Amp_13q12.2	0.166	1
9p-Amp	Amp_6p21.1	0.166	1
Amp_6p21.1	Amp_8p11.23	0.166	1
Amp_6p21.1	Del_17q24.3	0.166	1
Amp_13q12.2	Del_5q12.1	0.166	1
Del_3p26.3	Del_17q24.3	0.166	1
Del_7q31.1	Del_15q15.2	0.166	1
Del_14q31.1	Del_16q23.1	0.166	1
APC	PRPS1	0.167	1
TXNDC2	Del_3p14.2	0.167	1
16q-Amp	14q-Del	0.167	1
Amp_12p13.32	Amp_20p11.21	0.167	1
Del_3p14.2	Del_19p13.3	0.167	1
APC	Del_22q13.32	0.168	1
CRIPAK	TP53	0.168	1
CDH1	SMAD2	0.168	1
ST3GAL6	DIP2B	0.168	1
ASXL1	C11orf30	0.168	1
21q-Del	Del_8p23.2	0.168	1
Amp_17q12	Del_3p26.3	0.168	1
Amp_20p11.21	Del_5q21.2	0.168	1
TXNDC2	16q-Amp	0.169	1
STARD3NL	Del_6p25.3	0.169	1
P2RY13	Del_6p25.3	0.169	1
PCBP1	Del_19p13.3	0.169	1
RLIM	Amp_19p13.2	0.169	1
TOP2B	DCLK2	0.169	1
8p-Amp	Del_5q21.2	0.169	1
1p-Del	5q-Del	0.169	1
SELPLG	SLC26A8	0.17	1
SELPLG	FKBP9	0.17	1
RHOA	22q-Del	0.17	1
IQCD	21q-Del	0.17	1
GRB2	2p-Amp	0.17	1
GRB2	6p-Amp	0.17	1
PLAGL2	Del_5q22.2	0.17	1
PRRG1	PIK3R1	0.17	1
PRRG1	8p-Amp	0.17	1
RSPH3	6p-Amp	0.17	1
C2orf29	FKBP9	0.17	1
C2orf29	ALDH1A3	0.17	1
20p-Amp	17p-Del	0.17	1
20p-Amp	4q-Del	0.17	1
20q-Amp	Del_3p26.3	0.17	1
2p-Amp	Del_2q22.1	0.17	1
APC	PIK3R1	0.171	1
ARID1A	IFT57	0.171	1
ARID1A	ZNF486	0.171	1
B2M	NF2	0.171	1
IFT57	Del_16q23.1	0.171	1
PRPS1	7p-Amp	0.171	1
8q-Amp	Del_2p12	0.171	1
5q-Del	Del_10q25.2	0.171	1
Amp_2q33.1	Del_10q25.2	0.171	1
Del_7q31.1	Del_14q11.2	0.171	1
Del_7q31.1	Del_15q21.1	0.171	1
Del_10q23.31	Del_14q11.2	0.171	1
CRIPAK	PIK3R1	0.172	1
SOX9	NLRC4	0.172	1
GGT1	14q-Del	0.172	1
MVK	BCL9	0.172	1
BCL9	Amp_10q22.3	0.172	1
NLRC4	PRRG1	0.172	1
NLRC4	Amp_10q22.3	0.172	1
BCORL1	BIRC3	0.172	1
1p-Del	Amp_13q12.13	0.172	1
8p-Del	Del_2q22.1	0.172	1
RNF43	P2RY13	0.173	1
ACVR1B	CDH1	0.173	1
FMN2	MGA	0.173	1
BCL9	KDM6A	0.173	1
NLRC4	KDM6A	0.173	1
13q-Amp	Del_5q21.2	0.173	1
16p-Amp	Del_17p12	0.173	1
6p-Amp	Amp_17q12	0.173	1
15q-Del	Del_5q12.1	0.173	1
8p-Del	Amp_6p21.1	0.173	1
Del_1p13.2	Del_3p14.2	0.173	1
SOX9	Del_7q31.1	0.174	1
GGT1	PTGDR	0.174	1
GGT1	Del_7q31.1	0.174	1
STARD3NL	PLAGL2	0.174	1
TPRKB	PRPS1	0.174	1
TPRKB	PTGDR	0.174	1
P2RY13	PLAGL2	0.174	1
PCBP1	ATM	0.174	1
FYN	ATM	0.174	1
PTGDR	HIST1H1T	0.174	1
ATM	16q-Amp	0.174	1
18p-Del	Del_2p12	0.174	1
18p-Del	Del_16p13.3	0.174	1
Del_15q11.2	Del_16q23.1	0.174	1
B2M	C11orf30	0.175	1
MPHOSPH10	Amp_12p13.32	0.175	1
PRPS1	Amp_8q24.21	0.175	1
GMNN	17p-Del	0.175	1
1q-Amp	Del_5q12.1	0.175	1
Amp_8q24.21	Del_7q31.1	0.175	1
Amp_20q13.31	Del_12p13.1	0.175	1
ACVR1B	PRKDC	0.176	1
WNT1	RHOA	0.176	1
WNT1	IFT57	0.176	1
RHOA	ALG12	0.176	1
PRKDC	Amp_16p11.2	0.176	1
IQCD	ALG12	0.176	1
ALG12	ZNF486	0.176	1
IFT57	C14orf184	0.176	1
SMAD4	7q-Amp	0.176	1
8q-Amp	4q-Del	0.176	1
21q-Del	Del_3q26.31	0.176	1
8p-Del	Del_16p13.3	0.176	1
Amp_10q22.3	Del_18q22.1	0.176	1
Del_7q31.1	Del_14q31.1	0.176	1
RHOA	ROS1	0.177	1
THOC7	PTCH1	0.177	1
Amp_6p21.1	Amp_13q12.2	0.177	1
Amp_20q12	Del_19p13.3	0.177	1
7q-Amp	Del_4p16.2	0.178	1
4q-Del	Amp_16p11.2	0.178	1
8p-Del	Del_21q11.2	0.178	1
Amp_11p15.5	Del_8q11.1	0.178	1
Del_5q22.2	Del_14q11.2	0.178	1
SMAD2	HLA-A	0.179	1
RSPH3	BMPR2	0.179	1
BMPR2	IDH1	0.179	1
13q-Amp	Del_5q12.1	0.179	1
4p-Del	Amp_20p11.21	0.179	1
Amp_6p21.1	Del_10q21.1	0.179	1
Amp_20p11.21	Del_2p12	0.179	1
Del_1p36.11	Del_10q25.2	0.179	1
Del_3p26.3	Del_10q21.1	0.179	1
Del_8q11.1	Del_12p13.1	0.179	1
TP53	17q-Amp	0.18	1
NF2	Del_16q23.1	0.18	1
NR1H3	1q-Amp	0.18	1
16q-Amp	1q-Amp	0.18	1
21q-Del	Del_8p22	0.18	1
Del_1p13.2	Del_10q25.2	0.18	1
Del_3p14.2	Del_8p23.2	0.18	1
BCOR	IFT57	0.181	1
Amp_17q12	Del_1p36.11	0.181	1
Del_7q31.1	Del_15q11.2	0.181	1
APC	Amp_8q12.1	0.182	1
ACVR1B	BIRC3	0.182	1
MLH1	7q-Amp	0.182	1
FBXW7	Del_16q23.1	0.182	1
ATXN3L	Amp_1q31.1	0.182	1
MVK	KDM6A	0.182	1
ZBTB20	RLIM	0.182	1
ERBB2	NEXN	0.182	1
NR1H3	PTCH1	0.182	1
PTCH1	DCLK2	0.182	1
PTCH1	FYN	0.182	1
GRB2	RB1	0.182	1
MPHOSPH10	IDH1	0.182	1
BIRC3	KDM6A	0.182	1
13q-Amp	Del_5q22.2	0.182	1
Amp_1q31.1	Del_3q26.31	0.182	1
Amp_10q22.3	Amp_16p11.2	0.182	1
Amp_17q24.1	Del_3q26.31	0.182	1
Del_6q26	Del_17q24.3	0.182	1
FBXW7	DCLK2	0.183	1
P2RY13	Amp_8q12.1	0.183	1
ALG12	Amp_8p11.21	0.183	1
C2orf29	GMNN	0.183	1
SLC26A8	GMNN	0.183	1
L1TD1	GMNN	0.183	1
FKBP9	GMNN	0.183	1
20p-Amp	Del_3p26.3	0.183	1
14q-Del	Del_3p14.2	0.183	1
Amp_6p21.1	Amp_13q22.1	0.183	1
ACVR1B	RB1	0.184	1
SELPLG	ATXN3L	0.184	1
SELPLG	NEXN	0.184	1
MAPK6	ATXN3L	0.184	1
NF1	8p-Amp	0.184	1
ATXN3L	ALDH1A3	0.184	1
SLC26A8	Amp_2q33.1	0.184	1
ALDH1A3	NEXN	0.184	1
6p-Amp	Amp_13q12.2	0.184	1
15q-Del	Del_6p25.3	0.184	1
5q-Del	Del_16p13.3	0.184	1
Del_3q26.31	Del_16p13.3	0.184	1
CRIPAK	1q-Amp	0.185	1
FAM123B	Del_5q21.2	0.185	1
MLH1	SLC26A8	0.185	1
PLAGL2	RBPJ	0.185	1
ROS1	Amp_19p13.2	0.185	1
Del_6p25.3	Del_15q21.1	0.185	1
FBXW7	Amp_8p11.23	0.186	1
VCX2	CTNNB1	0.186	1
PTEN	NEXN	0.186	1
20q-Amp	5q-Del	0.186	1
8p-Amp	Del_12p13.1	0.186	1
APC	CHUK	0.187	1
APC	GMPS	0.187	1
TXNDC2	OR4D10	0.187	1
TXNDC2	GMPS	0.187	1
SMAD2	CREBBP	0.187	1
ST3GAL6	CDK12	0.187	1
RBPJ	TOP2B	0.187	1
TOP2B	GMPS	0.187	1
12p-Amp	20p-Amp	0.187	1
6p-Amp	Amp_13q22.1	0.187	1
7q-Amp	4p-Del	0.187	1
Amp_20p11.21	Del_4q22.1	0.187	1
Del_5q12.1	Del_8q11.1	0.187	1
Del_14q11.2	Del_16p13.3	0.187	1
TP53	16q-Amp	0.188	1
MGA	PRPS1	0.188	1
MGA	Del_7q31.1	0.188	1
MVK	ALG12	0.188	1
MVK	C14orf184	0.188	1
ALG12	PRRG1	0.188	1
C14orf184	Amp_10q22.3	0.188	1
IDH1	7q-Amp	0.188	1
16q-Amp	Del_17p12	0.188	1
8p-Amp	Del_18q21.2	0.188	1
Amp_10q22.3	Del_18q21.2	0.188	1
Del_2q22.1	Del_18q12.2	0.188	1
Del_3p14.2	Del_5q12.1	0.188	1
GGT1	ATM	0.189	1
FAM9A	Del_7q31.1	0.189	1
THOC7	PTGDR	0.189	1
RB1	L1TD1	0.189	1
Amp_5q22.3	Amp_8p11.21	0.189	1
Amp_8p11.21	Del_12p13.1	0.189	1
Amp_20p11.21	Del_10q25.2	0.189	1
FBXW7	ST3GAL6	0.19	1
FBXW7	PLEKHF2	0.19	1
MVK	Amp_8p11.23	0.19	1
ASXL1	DDX26B	0.19	1
PRRG1	Amp_8p11.23	0.19	1
VCX2	Amp_8q12.1	0.19	1
RBPJ	8q-Amp	0.19	1
LARP4B	8p-Amp	0.19	1
Amp_8q24.21	Del_16p13.3	0.19	1
Amp_10q22.3	Del_14q31.1	0.19	1
ARID1A	PTGDR	0.191	1
SOX9	MPHOSPH10	0.191	1
FMN2	RLIM	0.191	1
GGT1	TPRKB	0.191	1
IQCD	DIP2B	0.191	1
IFT57	9p-Amp	0.191	1
9p-Amp	Amp_13q12.2	0.191	1
Amp_2q33.1	Del_18p11.31	0.191	1
FMN2	ST3GAL6	0.192	1
NF1	9p-Amp	0.192	1
BCL9	PCBP1	0.192	1
P2RY13	SLC12A6	0.192	1
NR1H3	NLRC4	0.192	1
NR1H3	BCORL1	0.192	1
NLRC4	DCLK2	0.192	1
DCLK2	SLC12A6	0.192	1
HLA-A	Del_3p26.3	0.192	1
FYN	BCORL1	0.192	1
BCORL1	16q-Amp	0.192	1
NEXN	GMNN	0.192	1
16p-Amp	Del_3p26.3	0.192	1
9p-Amp	Amp_8p11.21	0.192	1
Amp_8p11.21	Del_17q24.3	0.192	1
Del_3p14.2	Del_18p11.31	0.192	1
APC	ROS1	0.193	1
PRRG1	Del_16q23.1	0.193	1
1q-Amp	Del_8p22	0.193	1
5q-Del	Del_1p33	0.193	1
Del_1p33	Del_3q26.31	0.193	1
FAM123B	MAPK6	0.194	1
FAM123B	ALDH1A3	0.194	1
FAM9A	CREBBP	0.194	1
THOC7	Del_15q22.33	0.194	1
GRB2	CREBBP	0.194	1
CREBBP	Del_2q22.1	0.194	1
12p-Amp	21q-Del	0.194	1
14q-Del	Amp_16p11.2	0.194	1
21q-Del	Del_5q12.1	0.194	1
Amp_8p11.23	Del_16p13.3	0.194	1
ZFP36L2	PLAGL2	0.195	1
RPTN	PLAGL2	0.195	1
FBXW7	PRPS1	0.195	1
8q-Amp	Del_17q24.3	0.195	1
21q-Del	Del_16q23.1	0.195	1
Amp_1q31.1	Amp_11p15.5	0.195	1
Amp_5q22.3	Del_22q13.32	0.195	1
Amp_8q12.1	Del_2p12	0.195	1
Del_6q26	Del_10q21.1	0.195	1
THOC7	ERBB2	0.196	1
ERBB2	RSPH3	0.196	1
RSPH3	Amp_1q31.1	0.196	1
RSPH3	Amp_17q24.1	0.196	1
RLIM	Del_12p13.1	0.196	1
Amp_20q13.31	Del_17q24.3	0.196	1
APC	Del_5q22.2	0.197	1
RPTN	4p-Del	0.197	1
PIK3R1	DCLK2	0.197	1
PIK3R1	16q-Amp	0.197	1
RBBP7	Del_3p14.2	0.197	1
16p-Amp	4p-Del	0.197	1
Amp_10q22.3	Del_8p23.2	0.197	1
Del_3p14.2	Del_8q11.1	0.197	1
MLH1	IFT57	0.198	1
IFT57	2p-Amp	0.198	1
IFT57	6p-Amp	0.198	1
RSPH3	SMAD4	0.198	1
Amp_20p11.21	Del_5q22.2	0.198	1
APC	Del_4q35.1	0.199	1
FAM123B	NF1	0.199	1
GGT1	4q-Del	0.199	1
SELPLG	ZBTB20	0.199	1
MAPK6	MAP4K3	0.199	1
ZBTB20	SLC26A8	0.199	1
ALDH1A3	IDH1	0.199	1
GMNN	Del_15q11.2	0.199	1
20q-Amp	Del_2p12	0.199	1
Del_10q25.2	Del_14q11.2	0.199	1
FAM123B	21q-Del	0.2	1
WNT1	P2RY13	0.2	1
WNT1	NR1H3	0.2	1
PRKDC	Del_2q22.1	0.2	1
ATXN3L	Del_3q26.31	0.2	1
P2RY13	ALG12	0.2	1
NR1H3	ALG12	0.2	1
SMAD4	Del_10q25.2	0.2	1
C14orf184	16q-Amp	0.2	1
BIRC3	21q-Del	0.2	1
13q-Amp	Amp_17q24.1	0.2	1
21q-Del	Amp_10q22.3	0.2	1
Amp_2q33.1	Del_3q26.31	0.2	1
Del_2q22.1	Del_22q13.32	0.2	1
ZBTB20	GMNN	0.201	1
MAP4K3	GMNN	0.201	1
14q-Del	Del_10q23.31	0.201	1
Amp_1q31.1	Del_1p36.11	0.201	1
Amp_13q12.13	Amp_17q24.1	0.201	1
Amp_19p13.2	Amp_20q11.21	0.201	1
APC	7q-Amp	0.202	1
APC	Del_1p13.2	0.202	1
APC	Del_14q11.2	0.202	1
MLH1	ALG12	0.202	1
MLH1	C14orf184	0.202	1
ERBB2	IDH1	0.202	1
C2orf29	Amp_12p13.32	0.202	1
ALDH1A3	Amp_12p13.32	0.202	1
SETD2	PTGDR	0.202	1
SETD2	Del_7q31.1	0.202	1
13q-Amp	Del_10q21.1	0.202	1
Amp_16p11.2	Del_18q12.2	0.202	1
Amp_19p13.2	Del_1p36.11	0.202	1
CRIPAK	Del_4q35.1	0.203	1
TP53	Del_3p14.2	0.203	1
FAM123B	BCL9	0.203	1
FAM123B	BCORL1	0.203	1
ACVR1B	PCBP1	0.203	1
ACVR1B	FYN	0.203	1
P2RY13	KDM6A	0.203	1
20q-Amp	Del_8q11.1	0.203	1
20p-Del	Amp_8q12.1	0.203	1
CRIPAK	BIRC3	0.204	1
BCOR	Amp_10q22.3	0.204	1
C14orf184	Amp_8q24.21	0.204	1
6p-Amp	Amp_13q12.13	0.204	1
7q-Amp	4q-Del	0.204	1
8q-Amp	Del_15q15.2	0.204	1
17p-Del	Del_16p13.3	0.204	1
4q-Del	Amp_20p11.21	0.204	1
Amp_2q33.1	Del_18q22.1	0.204	1
EGR1	PRPS1	0.205	1
ST3GAL6	PRPS1	0.205	1
ST3GAL6	PTGDR	0.205	1
PLEKHF2	BMPR2	0.205	1
PLEKHF2	PRPS1	0.205	1
VCX2	PTGDR	0.205	1
SMAD4	Amp_10q22.3	0.205	1
HIST1H1T	Del_1p36.11	0.205	1
8p-Del	Del_6p25.3	0.205	1
TP53	1p-Del	0.206	1
FAM123B	RHOA	0.206	1
FAM123B	IQCD	0.206	1
ZFP36L2	TOP2B	0.206	1
TXNDC2	HLA-A	0.206	1
RPTN	Del_6p25.3	0.206	1
PLAGL2	RLIM	0.206	1
RBBP7	Del_19p13.3	0.206	1
HLA-A	Del_19p13.3	0.206	1
SLC12A6	Del_3p14.2	0.206	1
20q-Amp	Del_17q24.3	0.206	1
ARID1A	GMNN	0.207	1
Del_2q22.1	Del_18p11.31	0.207	1
GGT1	THOC7	0.208	1
GGT1	GRB2	0.208	1
FAM9A	TPRKB	0.208	1
THOC7	TPRKB	0.208	1
CHUK	PIK3R1	0.208	1
TPRKB	GRB2	0.208	1
TPRKB	RSPH3	0.208	1
GRB2	HIST1H1T	0.208	1
SMAD4	HLA-A	0.208	1
RB1	CDK12	0.208	1
8p-Amp	Amp_6p21.1	0.208	1
Amp_8p11.23	Del_17p12	0.208	1
Amp_20q11.21	Del_2p12	0.208	1
Del_2p12	Del_22q13.32	0.208	1
ARID1A	BIRC3	0.209	1
ZFP36L2	Del_15q22.33	0.209	1
ALPK2	Del_7q31.1	0.209	1
ASXL1	PTGDR	0.209	1
SMAD4	Amp_19p13.2	0.209	1
GMNN	Del_12p13.1	0.209	1
Del_10q25.2	Del_14q31.1	0.209	1
FBXW7	Amp_8q12.1	0.21	1
CHUK	RLIM	0.21	1
RLIM	Amp_6p21.1	0.21	1
ROS1	IDH1	0.21	1
1p-Del	Amp_6p21.1	0.21	1
APC	Del_8p23.2	0.211	1
FAM123B	15q-Del	0.211	1
HIST1H1T	Del_15q15.2	0.211	1
17q-Amp	Del_18q22.1	0.211	1
7q-Amp	8p-Del	0.211	1
21q-Del	Del_3p14.2	0.211	1
8p-Del	Del_3q26.31	0.211	1
Del_5q22.2	Del_10q23.31	0.211	1
Del_5q22.2	Del_16p13.3	0.211	1
APC	22q-Del	0.212	1
TP53	PIK3R1	0.212	1
WNT1	RBPJ	0.212	1
BCL9	GMPS	0.212	1
ALG12	DDX26B	0.212	1
PRRG1	6p-Amp	0.212	1
RBPJ	2q-Amp	0.212	1
BCORL1	GMPS	0.212	1
17q-Amp	14q-Del	0.212	1
2p-Amp	Amp_10q22.3	0.212	1
6p-Amp	Amp_10q22.3	0.212	1
Amp_6p21.1	Amp_13q12.13	0.212	1
Amp_11p15.5	Del_1p33	0.212	1
Amp_12p13.32	Del_8p22	0.212	1
APC	Amp_5q22.3	0.213	1
TXNDC2	PTCH1	0.213	1
WNT1	Amp_12p13.32	0.213	1
FBXW7	Amp_12p13.32	0.213	1
IQCD	Amp_12p13.32	0.213	1
C14orf184	Amp_12p13.32	0.213	1
1q-Amp	Del_10q21.1	0.213	1
Amp_5q22.3	Amp_8q24.21	0.213	1
SOX9	SLC26A8	0.214	1
SOX9	L1TD1	0.214	1
SMAD2	SELPLG	0.214	1
SMAD2	SLC26A8	0.214	1
SELPLG	17q-Amp	0.214	1
C2orf29	Amp_5q22.3	0.214	1
18q-Del	Del_6p25.3	0.214	1
Amp_2q33.1	Del_17p12	0.214	1
Amp_19p13.2	Del_17p12	0.214	1
Amp_20p11.21	Del_21q11.2	0.214	1
Del_12p13.1	Del_16p13.3	0.214	1
MLH1	KDM6A	0.215	1
ATXN3L	ZBTB20	0.215	1
ATXN3L	Del_10q23.31	0.215	1
MVK	DIP2B	0.215	1
NR1H3	Del_16q23.1	0.215	1
DIP2B	PRRG1	0.215	1
21q-Del	Amp_12p13.32	0.215	1
5q-Del	Del_10q23.31	0.215	1
Amp_5q22.3	Del_5q21.2	0.215	1
Del_4p16.2	Del_12p13.1	0.215	1
ARID1A	MAPK6	0.216	1
CDH1	MVK	0.216	1
CDH1	BIRC3	0.216	1
RPTN	ALPK2	0.216	1
RPTN	ASXL1	0.216	1
BCL9	9p-Amp	0.216	1
ALPK2	Amp_8p11.23	0.216	1
NLRC4	DIP2B	0.216	1
NLRC4	9p-Amp	0.216	1
PLAGL2	ALDH1A3	0.216	1
DIP2B	BCORL1	0.216	1
9p-Amp	Amp_8p11.23	0.216	1
Del_2p12	Del_16p13.3	0.216	1
Del_6p25.3	Del_18q22.1	0.216	1
Del_14q31.1	Del_17q24.3	0.216	1
RNF43	PRPS1	0.217	1
RNF43	PTGDR	0.217	1
OR4D10	8p-Del	0.217	1
PRKDC	16p-Amp	0.217	1
CHUK	BMPR2	0.217	1
HIST1H1T	Del_15q21.1	0.217	1
6p-Amp	Del_5q21.2	0.217	1
14q-Del	Del_2p12	0.217	1
Del_2p12	Del_21q11.2	0.217	1
APC	DCLK2	0.218	1
APC	FYN	0.218	1
ARID1A	Del_6p25.3	0.218	1
SELPLG	Amp_8q12.1	0.218	1
CHUK	GMNN	0.218	1
BCL9	SETD2	0.218	1
DIP2B	Del_10q23.31	0.218	1
9p-Amp	Del_10q23.31	0.218	1
Amp_8q12.1	Del_16p13.3	0.218	1
Amp_20q11.21	Del_8q11.1	0.218	1
Del_3q26.31	Del_14q11.2	0.218	1
PTCH1	2p-Amp	0.219	1
PTCH1	6p-Amp	0.219	1
Amp_13q22.1	Del_10q25.2	0.219	1
ACVR1B	ATM	0.22	1
SELPLG	15q-Del	0.22	1
RHOA	PRPS1	0.22	1
RHOA	Del_7q31.1	0.22	1
IQCD	PTGDR	0.22	1
PTGDR	ZNF486	0.22	1
ZNF486	Del_7q31.1	0.22	1
12p-Amp	Amp_20q11.21	0.221	1
16q-Amp	Del_14q11.2	0.221	1
7q-Amp	Del_12p13.1	0.221	1
Amp_2q33.1	Del_18q21.2	0.221	1
Amp_20q12	Del_3p26.3	0.221	1
Del_1p13.2	Del_16q23.1	0.221	1
GGT1	MGA	0.222	1
GGT1	12p-Amp	0.222	1
GGT1	Amp_8p11.23	0.222	1
GGT1	Del_14q31.1	0.222	1
Amp_1q31.1	Del_4q35.1	0.222	1
Del_2q22.1	Del_10q23.31	0.222	1
B2M	PTCH1	0.223	1
PRKDC	Amp_12p13.32	0.223	1
BCORL1	Del_5q22.2	0.223	1
20p-Amp	15q-Del	0.223	1
17p-Del	Amp_17q12	0.223	1
ZFP36L2	WNT1	0.224	1
ZFP36L2	C14orf184	0.224	1
CDH1	SELPLG	0.224	1
WNT1	RBBP7	0.224	1
FMN2	C14orf184	0.224	1
RPTN	ALG12	0.224	1
NF1	Amp_6p21.1	0.224	1
ERBB2	ST3GAL6	0.224	1
ERBB2	PLEKHF2	0.224	1
ERBB2	Del_3p14.2	0.224	1
ALG12	RBBP7	0.224	1
ALG12	HLA-A	0.224	1
ALG12	Del_8q11.1	0.224	1
C14orf184	16p-Amp	0.224	1
8p-Amp	Del_18q12.2	0.224	1
18q-Del	Amp_2q33.1	0.224	1
Amp_17q24.1	Del_3p14.2	0.224	1
RNF43	RPTN	0.225	1
TP53	Del_1p33	0.225	1
TXNDC2	MPHOSPH10	0.225	1
ACVR1B	RBPJ	0.225	1
ACVR1B	GMPS	0.225	1
GGT1	VCX2	0.225	1
OR4D10	KDM6A	0.225	1
EGR1	HIST1H1T	0.225	1
FBXW7	12p-Amp	0.225	1
TPRKB	ST3GAL6	0.225	1
ST3GAL6	PTCH1	0.225	1
ST3GAL6	HIST1H1T	0.225	1
PLEKHF2	HIST1H1T	0.225	1
RLIM	TOP2B	0.225	1
RBPJ	KDM6A	0.225	1
PTEN	PTGDR	0.225	1
13q-Amp	2q-Amp	0.225	1
1p-Del	Del_6p25.3	0.225	1
22q-Del	Amp_5q22.3	0.225	1
ATXN3L	PLAGL2	0.226	1
ATXN3L	RB1	0.226	1
ATXN3L	Del_14q31.1	0.226	1
RBPJ	8p-Amp	0.226	1
8q-Amp	Del_15q21.1	0.226	1
Amp_5q22.3	Del_8p23.2	0.226	1
Amp_8p11.23	Amp_19p13.2	0.226	1
Amp_19p13.2	Del_2p12	0.226	1
Del_2p12	Del_3q26.31	0.226	1
CRIPAK	STARD3NL	0.227	1
CRIPAK	ROS1	0.227	1
CRIPAK	GPATCH8	0.227	1
FAM123B	CTNNB1	0.227	1
TXNDC2	GMNN	0.227	1
BCOR	STARD3NL	0.227	1
BCOR	NR1H3	0.227	1
BCOR	FYN	0.227	1
FAM9A	GRB2	0.227	1
FAM9A	RSPH3	0.227	1
THOC7	GRB2	0.227	1
GRB2	RSPH3	0.227	1
RSPH3	Del_2q22.1	0.227	1
TOP2B	GMNN	0.227	1
PTEN	GMPS	0.227	1
1q-Amp	20p-Del	0.227	1
4q-Del	Del_3q26.31	0.227	1
Amp_20q12	Del_2p12	0.227	1
HIST1H1T	Del_15q11.2	0.228	1
17q-Amp	Del_18q21.2	0.228	1
SELPLG	C11orf30	0.229	1
MAPK6	Amp_6p21.1	0.229	1
CHUK	FKBP9	0.229	1
20p-Amp	2q-Amp	0.229	1
8q-Amp	Del_10q21.1	0.229	1
Amp_6p21.1	Del_16p13.3	0.229	1
GGT1	4p-Del	0.23	1
GGT1	Del_3p14.2	0.23	1
THOC7	17p-Del	0.23	1
ASXL1	NLRC4	0.23	1
CDK12	8p-Amp	0.23	1
Amp_12p13.32	Amp_19p13.2	0.23	1
TXNDC2	PIK3R1	0.231	1
TXNDC2	Del_4q35.1	0.231	1
STARD3NL	22q-Del	0.231	1
OR4D10	Amp_8q12.1	0.231	1
FBXW7	RBPJ	0.231	1
PLEKHF2	RB1	0.231	1
17q-Amp	Amp_19p13.2	0.231	1
17q-Amp	Del_3q26.31	0.231	1
1q-Amp	Del_15q11.2	0.231	1
8p-Amp	Del_6p25.3	0.231	1
Amp_2q33.1	Amp_5q22.3	0.231	1
Amp_5q22.3	Amp_19p13.2	0.231	1
Amp_17q12	Del_5q21.2	0.231	1
Del_3q26.31	Del_12p13.1	0.231	1
TP53	TXNDC2	0.232	1
RHOA	BMPR2	0.232	1
MAP4K3	IDH1	0.232	1
PRPS1	7q-Amp	0.232	1
PTGDR	7q-Amp	0.232	1
20p-Amp	Del_6p25.3	0.232	1
18p-Del	Amp_2q33.1	0.232	1
Del_10q21.1	Del_14q11.2	0.232	1
RPTN	BCL9	0.233	1
RPTN	SLC12A6	0.233	1
PLEKHF2	CREBBP	0.233	1
DIP2B	KDM6A	0.233	1
VCX2	CREBBP	0.233	1
9p-Amp	Amp_13q12.13	0.233	1
Amp_12p13.32	Del_1p36.11	0.233	1
Amp_16p11.2	Del_17q24.3	0.233	1
BCOR	Del_16q23.1	0.234	1
FMN2	NLRC4	0.234	1
12p-Amp	Del_16q23.1	0.234	1
Del_3p14.2	Del_18q12.2	0.234	1
APC	14q-Del	0.235	1
MVK	PRPS1	0.235	1
PRRG1	PRPS1	0.235	1
PRRG1	PTGDR	0.235	1
PTEN	Amp_8p11.21	0.235	1
PTGDR	BIRC3	0.235	1
1q-Amp	Amp_8q24.21	0.235	1
8q-Amp	Del_6p25.3	0.235	1
8q-Amp	Del_19p13.3	0.235	1
Amp_5q22.3	Del_1p33	0.235	1
Amp_10q22.3	Del_7q31.1	0.235	1
Amp_19p13.2	Del_15q11.2	0.235	1
Del_1p33	Del_12p13.1	0.235	1
Del_6p25.3	Del_18q21.2	0.235	1
TXNDC2	BMPR2	0.236	1
WNT1	RLIM	0.236	1
SELPLG	MGA	0.236	1
MGA	C2orf29	0.236	1
ZBTB20	PLAGL2	0.236	1
ALG12	MPHOSPH10	0.236	1
ALDH1A3	12p-Amp	0.236	1
ATM	Amp_8p11.23	0.236	1
20p-Amp	8p-Del	0.236	1
APC	Amp_8q24.21	0.237	1
DDX26B	Del_16q23.1	0.237	1
20p-Del	Amp_10q22.3	0.237	1
TP53	PRRG1	0.238	1
SOX9	ATXN3L	0.238	1
SOX9	NEXN	0.238	1
SOX9	Amp_2q33.1	0.238	1
ERBB2	SETD2	0.238	1
PIK3R1	PTGDR	0.238	1
PIK3R1	Del_7q31.1	0.238	1
PTGDR	8p-Amp	0.238	1
8p-Amp	18q-Del	0.238	1
Del_2q22.1	Del_18q22.1	0.238	1
SOX9	FAM9A	0.239	1
MLH1	IDH1	0.239	1
P2RY13	Del_17q24.3	0.239	1
PCBP1	LARP4B	0.239	1
RBPJ	2p-Amp	0.239	1
16q-Amp	Del_17q24.3	0.239	1
14q-Del	Del_5q21.2	0.239	1
ARID1A	TPRKB	0.24	1
PRKDC	VCX2	0.24	1
CHUK	Del_4p16.2	0.24	1
PLEKHF2	Del_22q13.32	0.24	1
NR1H3	ROS1	0.24	1
PCBP1	ROS1	0.24	1
4q-Del	Amp_8q12.1	0.24	1
Amp_1q31.1	Amp_20q12	0.24	1
Amp_6p21.1	Del_4p16.2	0.24	1
NF1	Amp_8q24.21	0.241	1
ATM	Del_16p13.3	0.241	1
Amp_13q22.1	Del_5q22.2	0.241	1
Del_6p25.3	Del_15q22.33	0.241	1
APC	MAP4K3	0.242	1
TPRKB	IQCD	0.242	1
TPRKB	ZNF486	0.242	1
IQCD	HIST1H1T	0.242	1
ASXL1	RLIM	0.242	1
VCX2	18q-Del	0.242	1
VCX2	Amp_20q13.31	0.242	1
HIST1H1T	ZNF486	0.242	1
7p-Amp	Del_19p13.3	0.242	1
1p-Del	Amp_17q12	0.242	1
RHOA	Del_10q25.2	0.243	1
CHUK	ERBB2	0.243	1
BCL9	GMNN	0.243	1
NLRC4	GMNN	0.243	1
SLC12A6	GMNN	0.243	1
PRPS1	CTNNB1	0.243	1
Amp_17q24.1	Del_3p26.3	0.243	1
APC	Amp_8p11.21	0.244	1
TXNDC2	SELPLG	0.244	1
TXNDC2	SLC26A8	0.244	1
SMAD4	Del_17q24.3	0.244	1
L1TD1	Del_6p25.3	0.244	1
FKBP9	Del_6p25.3	0.244	1
Amp_12p13.32	Del_4q22.1	0.244	1
Del_6p25.3	Del_16p13.3	0.244	1
FAM9A	ST3GAL6	0.245	1
THOC7	ST3GAL6	0.245	1
ST3GAL6	RSPH3	0.245	1
PLEKHF2	RSPH3	0.245	1
PLEKHF2	Del_2q22.1	0.245	1
GRB2	VCX2	0.245	1
13q-Amp	8p-Amp	0.245	1
20p-Amp	Del_1p13.2	0.245	1
Amp_1q31.1	Del_15q11.2	0.245	1
ZFP36L2	ACVR1B	0.246	1
ACVR1B	RPTN	0.246	1
ACVR1B	RBBP7	0.246	1
ACVR1B	HLA-A	0.246	1
GGT1	Amp_17q12	0.246	1
RPTN	KDM6A	0.246	1
TPRKB	ASXL1	0.246	1
ALG12	8q-Amp	0.246	1
PLAGL2	Amp_5q22.3	0.246	1
PLAGL2	Del_12p13.1	0.246	1
Amp_1q31.1	Del_22q13.32	0.246	1
Amp_5q22.3	Del_2p12	0.246	1
Del_7q31.1	Del_17p12	0.246	1
Del_10q25.2	Del_21q11.2	0.246	1
WNT1	MAPK6	0.247	1
WNT1	FKBP9	0.247	1
SELPLG	C14orf184	0.247	1
SELPLG	2q-Amp	0.247	1
MAPK6	ALG12	0.247	1
FBXW7	CHUK	0.247	1
CHUK	Amp_19p13.2	0.247	1
ALG12	SLC26A8	0.247	1
ALG12	L1TD1	0.247	1
ALG12	FKBP9	0.247	1
ALG12	ALDH1A3	0.247	1
C11orf30	Amp_2q33.1	0.247	1
C2orf29	C14orf184	0.247	1
SLC26A8	2q-Amp	0.247	1
C14orf184	ALDH1A3	0.247	1
CTNNB1	8p-Del	0.247	1
20q-Amp	Del_19p13.3	0.247	1
Amp_10q22.3	Del_8p22	0.247	1
Amp_20p11.21	Del_2q22.1	0.247	1
Del_1p36.11	Del_2p12	0.247	1
THOC7	Del_1p13.2	0.248	1
8p-Amp	Del_18q22.1	0.248	1
Amp_8q24.21	Del_15q22.33	0.248	1
Del_1p13.2	Del_2q22.1	0.248	1
APC	ASXL1	0.249	1
APC	ALG12	0.249	1
APC	C14orf184	0.249	1
SMAD2	IDH1	0.249	1
IDH1	Amp_5q22.3	0.249	1
GMNN	CTNNB1	0.249	1
20p-Amp	Del_15q22.33	0.249	1
Amp_8p11.23	Del_5q21.2	0.249	1
Del_5q12.1	Del_15q22.33	0.249	1
Del_5q21.2	Del_14q31.1	0.249	1
FMN2	ATXN3L	0.25	1
STARD3NL	PRPS1	0.25	1
STARD3NL	PTGDR	0.25	1
STARD3NL	Del_7q31.1	0.25	1
NF1	ERBB2	0.25	1
ATXN3L	Amp_11p15.5	0.25	1
ATXN3L	Del_1p13.2	0.25	1
P2RY13	Del_7q31.1	0.25	1
PCBP1	PTGDR	0.25	1
DCLK2	PRPS1	0.25	1
DCLK2	PTGDR	0.25	1
DCLK2	Del_7q31.1	0.25	1
FYN	PTGDR	0.25	1
FYN	Del_7q31.1	0.25	1
LARP4B	Del_16q23.1	0.25	1
PTGDR	16q-Amp	0.25	1
8p-Del	Del_5q22.2	0.25	1
Amp_11p15.5	Amp_19p13.2	0.25	1
Amp_19p13.2	Del_1p13.2	0.25	1
Del_1p13.2	Del_3q26.31	0.25	1
TXNDC2	PRKDC	0.251	1
STARD3NL	Del_10q21.1	0.251	1
PRKDC	Del_6p25.3	0.251	1
CHUK	22q-Del	0.251	1
P2RY13	Amp_8q24.21	0.251	1
P2RY13	Del_10q21.1	0.251	1
NR1H3	Del_10q21.1	0.251	1
22q-Del	Amp_6p21.1	0.251	1
Del_1p36.11	Del_2q22.1	0.251	1
Del_2q22.1	Del_18q21.2	0.251	1
ACVR1B	ALPK2	0.252	1
ACVR1B	GMNN	0.252	1
ACVR1B	CTNNB1	0.252	1
GMNN	KDM6A	0.252	1
APC	PRRG1	0.253	1
APC	BIRC3	0.253	1
APC	Amp_10q22.3	0.253	1
ARID1A	FBXW7	0.253	1
MLH1	FBXW7	0.253	1
NF2	ALG12	0.253	1
NF2	C14orf184	0.253	1
RLIM	SLC12A6	0.253	1
Amp_13q12.13	Del_5q21.2	0.253	1
CRIPAK	Del_5q12.1	0.254	1
BCOR	12p-Amp	0.254	1
OR4D10	Del_4p16.2	0.254	1
TPRKB	Amp_8q24.21	0.254	1
RNF43	TPRKB	0.255	1
ZFP36L2	PIK3R1	0.255	1
ZFP36L2	8p-Amp	0.255	1
PIK3R1	16p-Amp	0.255	1
VCX2	14q-Del	0.255	1
RB1	Amp_12p13.32	0.255	1
1q-Amp	8p-Amp	0.255	1
17p-Del	Del_3q26.31	0.255	1
18p-Del	Del_3p14.2	0.255	1
NF1	Del_5q21.2	0.256	1
1q-Amp	Amp_20q12	0.256	1
CDH1	NR1H3	0.257	1
CDH1	PCBP1	0.257	1
MGA	Del_2q22.1	0.257	1
Amp_2q33.1	Del_8p23.2	0.257	1
Amp_8q24.21	Del_3p14.2	0.257	1
SELPLG	SETD2	0.258	1
THOC7	Del_15q15.2	0.258	1
TPRKB	MVK	0.258	1
TPRKB	PRRG1	0.258	1
SMAD4	PTGDR	0.258	1
ALDH1A3	SETD2	0.258	1
BIRC3	HIST1H1T	0.258	1
Del_2q22.1	Del_15q15.2	0.258	1
ALG12	CREBBP	0.259	1
ALG12	Del_3q26.31	0.259	1
C14orf184	Del_3q26.31	0.259	1
2q-Amp	Amp_19p13.2	0.259	1
2q-Amp	Del_3q26.31	0.259	1
FAM123B	SMAD4	0.26	1
B2M	Del_15q21.1	0.26	1
CDH1	Amp_2q33.1	0.26	1
NF1	ST3GAL6	0.26	1
ST3GAL6	Amp_8p11.21	0.26	1
GRB2	ATM	0.26	1
VCX2	Amp_8p11.21	0.26	1
RBBP7	Del_16q23.1	0.26	1
8p-Del	Del_17q24.3	0.26	1
Amp_13q12.13	Del_10q25.2	0.26	1
Amp_20q13.31	Del_3p26.3	0.26	1
Del_8q11.1	Del_16q23.1	0.26	1
Del_10q23.31	Del_12p13.1	0.26	1
GGT1	FBXW7	0.261	1
ATXN3L	Del_5q12.1	0.261	1
TPRKB	Amp_8q12.1	0.261	1
GRB2	Amp_13q12.2	0.261	1
DIP2B	Del_1p13.2	0.261	1
12p-Amp	Amp_19p13.2	0.261	1
Amp_13q12.2	Del_2q22.1	0.261	1
Amp_19p13.2	Del_5q12.1	0.261	1
Del_3q26.31	Del_5q12.1	0.261	1
SOX9	IDH1	0.262	1
PLAGL2	Amp_8p11.23	0.262	1
VCX2	SMAD4	0.262	1
Amp_8p11.21	Del_19p13.3	0.262	1
Del_2p12	Del_14q31.1	0.262	1
B2M	DIP2B	0.263	1
TXNDC2	NEXN	0.263	1
RHOA	FAM9A	0.263	1
FAM9A	IFT57	0.263	1
FAM9A	ZNF486	0.263	1
PRKDC	12p-Amp	0.263	1
THOC7	IQCD	0.263	1
ATXN3L	Del_6p25.3	0.263	1
ATXN3L	Del_19p13.3	0.263	1
IQCD	GRB2	0.263	1
DIP2B	RBPJ	0.263	1
IFT57	RSPH3	0.263	1
RSPH3	ZNF486	0.263	1
RBPJ	LARP4B	0.263	1
RBPJ	9p-Amp	0.263	1
FYN	20p-Del	0.263	1
CDK12	16q-Amp	0.263	1
7q-Amp	Amp_10q22.3	0.263	1
4q-Del	Amp_11p15.5	0.263	1
Amp_13q12.2	Del_3q26.31	0.263	1
B2M	PTGDR	0.264	1
TXNDC2	ERBB2	0.264	1
OR4D10	PRPS1	0.264	1
OR4D10	Amp_8p11.21	0.264	1
RHOA	Del_1p33	0.264	1
EGR1	PLEKHF2	0.264	1
FBXW7	NEXN	0.264	1
PLEKHF2	VCX2	0.264	1
DDX26B	PRPS1	0.264	1
GMPS	PRPS1	0.264	1
GMPS	Del_7q31.1	0.264	1
8p-Amp	Del_1p36.11	0.264	1
Amp_1q31.1	Del_6q26	0.264	1
Amp_1q31.1	Del_19p13.3	0.264	1
Amp_17q24.1	Del_19p13.3	0.264	1
RNF43	KDM6A	0.265	1
FAM123B	12p-Amp	0.265	1
WNT1	PRKDC	0.265	1
FMN2	BIRC3	0.265	1
FMN2	Amp_10q22.3	0.265	1
NF2	SLC26A8	0.265	1
NF2	L1TD1	0.265	1
CHUK	ZBTB20	0.265	1
RLIM	6p-Amp	0.265	1
C2orf29	Del_4q35.1	0.265	1
15q-Del	Amp_10q22.3	0.265	1
SOX9	FMN2	0.266	1
TXNDC2	PLAGL2	0.266	1
FAM9A	Del_3p14.2	0.266	1
THOC7	4p-Del	0.266	1
RSPH3	Del_3p14.2	0.266	1
17q-Amp	Del_12p13.1	0.266	1
20p-Amp	Del_15q21.1	0.266	1
Amp_13q22.1	Del_2q22.1	0.266	1
Del_2p12	Del_6q26	0.266	1
Del_2p12	Del_19p13.3	0.266	1
Del_5q21.2	Del_6p25.3	0.266	1
TP53	Del_10q23.31	0.267	1
RPTN	PTCH1	0.267	1
L1TD1	PTEN	0.267	1
Amp_20p11.21	Del_7q31.1	0.267	1
Del_6p25.3	Del_8p22	0.267	1
Del_6p25.3	Del_18q12.2	0.267	1
TP53	NEXN	0.268	1
FAM123B	MLH1	0.268	1
BCOR	GMNN	0.268	1
BCOR	9p-Amp	0.268	1
BCOR	Del_3p14.2	0.268	1
RLIM	KDM6A	0.268	1
MPHOSPH10	KDM6A	0.268	1
SMAD4	Amp_8q12.1	0.268	1
12p-Amp	Amp_13q22.1	0.268	1
APC	Del_10q23.31	0.269	1
SMAD4	Del_22q13.32	0.269	1
20q-Amp	6p-Amp	0.269	1
6p-Amp	Del_5q22.2	0.269	1
WNT1	ZBTB20	0.27	1
WNT1	MAP4K3	0.27	1
SELPLG	ASXL1	0.27	1
ASXL1	ALDH1A3	0.27	1
ALG12	IDH1	0.27	1
C14orf184	IDH1	0.27	1
17q-Amp	Del_18q12.2	0.27	1
20p-Del	4q-Del	0.27	1
Amp_11p15.5	Amp_13q12.13	0.27	1
Amp_17q24.1	Del_21q11.2	0.27	1
THOC7	Amp_8p11.23	0.271	1
FBXW7	KDM6A	0.271	1
GRB2	Amp_8p11.23	0.271	1
20p-Amp	Del_5q21.2	0.271	1
Amp_8p11.23	Del_2q22.1	0.271	1
Amp_16p11.2	Del_4q22.1	0.271	1
Del_2q22.1	Del_14q31.1	0.271	1
BMPR2	8p-Amp	0.272	1
8q-Amp	Del_15q11.2	0.272	1
14q-Del	Del_17q24.3	0.272	1
Amp_8q24.21	Del_10q23.31	0.272	1
Del_6p25.3	Del_21q11.2	0.272	1
CRIPAK	HLA-A	0.273	1
BCOR	RBBP7	0.273	1
MGA	Amp_8p11.23	0.273	1
SMAD4	Del_5q21.2	0.273	1
CTNNB1	Amp_6p21.1	0.273	1
13q-Amp	9p-Amp	0.273	1
Amp_2q33.1	Del_3p14.2	0.273	1
Amp_2q33.1	Del_18q12.2	0.273	1
Amp_8p11.23	Del_5q12.1	0.273	1
Amp_19p13.2	Del_3p14.2	0.273	1
APC	5q-Del	0.274	1
SOX9	CDH1	0.274	1
GGT1	DCLK2	0.274	1
MAPK6	BCORL1	0.274	1
TPRKB	P2RY13	0.274	1
TPRKB	DCLK2	0.274	1
TPRKB	GPATCH8	0.274	1
TPRKB	16q-Amp	0.274	1
P2RY13	HIST1H1T	0.274	1
NLRC4	C2orf29	0.274	1
FYN	HIST1H1T	0.274	1
ALDH1A3	SLC12A6	0.274	1
Amp_20p11.21	Del_3p14.2	0.274	1
FAM123B	PCBP1	0.275	1
SELPLG	Del_15q22.33	0.275	1
ROS1	PRPS1	0.275	1
ROS1	Del_7q31.1	0.275	1
RB1	12p-Amp	0.275	1
PTEN	Amp_8q12.1	0.275	1
1q-Amp	Del_2p12	0.275	1
Del_15q22.33	Del_16p13.3	0.275	1
FAM123B	BCOR	0.276	1
RHOA	PTCH1	0.276	1
DIP2B	GMNN	0.276	1
GMNN	9p-Amp	0.276	1
12p-Amp	13q-Amp	0.276	1
12p-Amp	Amp_20q12	0.276	1
8p-Del	Del_7q31.1	0.276	1
Del_12p13.1	Del_15q15.2	0.276	1
SELPLG	2p-Amp	0.277	1
MAPK6	6p-Amp	0.277	1
ALG12	Amp_8q12.1	0.277	1
C2orf29	6p-Amp	0.277	1
SLC26A8	2p-Amp	0.277	1
ALDH1A3	6p-Amp	0.277	1
8p-Del	Del_5q21.2	0.277	1
TP53	Amp_6p21.1	0.278	1
TXNDC2	21q-Del	0.278	1
NF2	CDK12	0.278	1
THOC7	Del_15q11.2	0.278	1
20q-Amp	Amp_1q31.1	0.278	1
21q-Del	Del_6p25.3	0.278	1
Amp_1q31.1	Amp_17q24.1	0.278	1
Del_1p33	Del_10q25.2	0.278	1
Del_2q22.1	Del_15q11.2	0.278	1
TP53	HIST1H1T	0.279	1
ZFP36L2	PRPS1	0.279	1
RPTN	PRPS1	0.279	1
ATXN3L	1q-Amp	0.279	1
TPRKB	8p-Amp	0.279	1
RBBP7	PTGDR	0.279	1
RB1	Del_5q22.2	0.279	1
HLA-A	PTGDR	0.279	1
1q-Amp	5q-Del	0.279	1
1q-Amp	Amp_19p13.2	0.279	1
CDH1	ERBB2	0.28	1
THOC7	MVK	0.28	1
THOC7	Amp_10q22.3	0.28	1
MGA	Amp_12p13.32	0.28	1
BCL9	PIK3R1	0.28	1
GRB2	BIRC3	0.28	1
GRB2	Amp_10q22.3	0.28	1
RSPH3	BIRC3	0.28	1
RSPH3	Amp_10q22.3	0.28	1
Amp_10q22.3	Del_2q22.1	0.28	1
SMAD2	C14orf184	0.281	1
SMAD2	2q-Amp	0.281	1
WNT1	Amp_5q22.3	0.281	1
WNT1	Del_12p13.1	0.281	1
SELPLG	7q-Amp	0.281	1
ALG12	Amp_5q22.3	0.281	1
PIK3R1	12p-Amp	0.281	1
VCX2	Del_18q12.2	0.281	1
PTGDR	Amp_13q12.2	0.281	1
2q-Amp	Amp_5q22.3	0.281	1
6p-Amp	Amp_20q11.21	0.281	1
7q-Amp	Del_5q12.1	0.281	1
7q-Amp	Del_16p13.3	0.281	1
TXNDC2	Del_18p11.31	0.282	1
RHOA	RB1	0.282	1
RHOA	Del_22q13.32	0.282	1
EGR1	PTEN	0.282	1
NF1	Amp_8p11.21	0.282	1
ERBB2	BIRC3	0.282	1
ST3GAL6	PTEN	0.282	1
PLEKHF2	Amp_11p15.5	0.282	1
PRRG1	Amp_1q31.1	0.282	1
VCX2	Del_1p13.2	0.282	1
SMAD4	7p-Amp	0.282	1
MAP4K3	Del_6p25.3	0.282	1
1p-Del	Del_16q23.1	0.282	1
Amp_1q31.1	Amp_10q22.3	0.282	1
Del_6q26	Del_18p11.31	0.282	1
BCOR	SETD2	0.283	1
RHOA	EGR1	0.283	1
EGR1	ZNF486	0.283	1
ST3GAL6	IQCD	0.283	1
ST3GAL6	IFT57	0.283	1
RB1	GMNN	0.283	1
CTNNB1	7q-Amp	0.283	1
KDM6A	Amp_8p11.23	0.283	1
13q-Amp	Amp_2q33.1	0.283	1
13q-Amp	Del_3q26.31	0.283	1
16p-Amp	Amp_8q12.1	0.283	1
Amp_8q12.1	Del_1p36.11	0.283	1
SMAD2	CHUK	0.284	1
P2RY13	Amp_12p13.32	0.284	1
NR1H3	Amp_12p13.32	0.284	1
C11orf30	Del_12p13.1	0.284	1
RSPH3	Amp_17q12	0.284	1
DCLK2	Amp_12p13.32	0.284	1
Del_3p26.3	Del_10q23.31	0.284	1
Del_3p26.3	Del_12p13.1	0.284	1
RPTN	Del_5q21.2	0.285	1
BCL9	PLAGL2	0.285	1
NLRC4	PLAGL2	0.285	1
PIK3R1	RLIM	0.285	1
MPHOSPH10	8p-Amp	0.285	1
RBBP7	Del_4p16.2	0.285	1
SETD2	Del_3q26.31	0.285	1
CTNNB1	Del_16q23.1	0.285	1
18q-Del	Amp_6p21.1	0.285	1
ARID1A	Amp_8p11.23	0.286	1
MLH1	Amp_12p13.32	0.286	1
17q-Amp	Del_14q11.2	0.286	1
1q-Amp	20p-Amp	0.286	1
15q-Del	Del_16q23.1	0.286	1
Amp_20q12	Del_2q22.1	0.286	1
Amp_20q13.31	Del_8q11.1	0.286	1
Del_12p13.1	Del_15q21.1	0.286	1
STARD3NL	BMPR2	0.287	1
RBBP7	Del_17q24.3	0.287	1
BMPR2	FYN	0.287	1
GMNN	Del_18p11.31	0.287	1
16p-Amp	Del_17q24.3	0.287	1
20p-Amp	Del_1p36.11	0.287	1
RNF43	SMAD4	0.288	1
RNF43	Del_16q23.1	0.288	1
MLH1	DIP2B	0.288	1
MLH1	8p-Del	0.288	1
BCOR	Amp_12p13.32	0.288	1
FMN2	Del_1p13.2	0.288	1
VCX2	Del_18p11.31	0.288	1
1p-Del	Amp_13q22.1	0.288	1
B2M	HIST1H1T	0.289	1
ACVR1B	MAPK6	0.289	1
ACVR1B	FKBP9	0.289	1
GGT1	RBPJ	0.289	1
MAPK6	KDM6A	0.289	1
MAPK6	Amp_16p11.2	0.289	1
TPRKB	DDX26B	0.289	1
TPRKB	RBPJ	0.289	1
TPRKB	GMPS	0.289	1
DDX26B	HIST1H1T	0.289	1
RBPJ	HIST1H1T	0.289	1
17q-Amp	Amp_12p13.32	0.289	1
ATXN3L	20p-Amp	0.29	1
GRB2	Amp_13q12.13	0.29	1
NEXN	6p-Amp	0.29	1
2p-Amp	Amp_19p13.2	0.29	1
6p-Amp	Amp_2q33.1	0.29	1
6p-Amp	Del_3q26.31	0.29	1
8p-Amp	Del_5q22.2	0.29	1
8q-Amp	Del_2q22.1	0.29	1
Amp_13q12.2	Del_10q23.31	0.29	1
ZFP36L2	Del_15q15.2	0.291	1
7q-Amp	Del_6p25.3	0.291	1
APC	IFT57	0.292	1
TP53	PRKDC	0.292	1
EGR1	MGA	0.292	1
CHUK	ALG12	0.292	1
CHUK	C14orf184	0.292	1
ST3GAL6	12p-Amp	0.292	1
VCX2	Del_5q12.1	0.292	1
C14orf184	Amp_6p21.1	0.292	1
CDK12	GMNN	0.292	1
1q-Amp	Del_4p16.2	0.292	1
RLIM	PRPS1	0.293	1
MPHOSPH10	PTGDR	0.293	1
MPHOSPH10	Del_7q31.1	0.293	1
PTGDR	1p-Del	0.293	1
Amp_12p13.32	Amp_20q13.31	0.293	1
ACVR1B	PLAGL2	0.294	1
8p-Del	Del_10q21.1	0.294	1
Amp_16p11.2	Del_2p12	0.294	1
ATXN3L	BCORL1	0.295	1
ATXN3L	SLC12A6	0.295	1
NLRC4	Amp_19p13.2	0.295	1
BCORL1	NEXN	0.295	1
8q-Amp	4p-Del	0.295	1
ZFP36L2	22q-Del	0.296	1
16p-Amp	22q-Del	0.296	1
17q-Amp	Del_14q31.1	0.296	1
Amp_1q31.1	Del_1p33	0.296	1
Amp_5q22.3	Del_14q31.1	0.296	1
CRIPAK	RLIM	0.297	1
CRIPAK	MPHOSPH10	0.297	1
STARD3NL	GRB2	0.297	1
FAM9A	NR1H3	0.297	1
FAM9A	DCLK2	0.297	1
FAM9A	FYN	0.297	1
P2RY13	RSPH3	0.297	1
P2RY13	Del_2q22.1	0.297	1
NR1H3	RSPH3	0.297	1
ALPK2	Del_3q26.31	0.297	1
ASXL1	NEXN	0.297	1
ASXL1	5q-Del	0.297	1
GRB2	PCBP1	0.297	1
GRB2	DCLK2	0.297	1
GRB2	FYN	0.297	1
GRB2	16q-Amp	0.297	1
RSPH3	GPATCH8	0.297	1
L1TD1	CTNNB1	0.297	1
GPATCH8	Del_2q22.1	0.297	1
16q-Amp	Del_2q22.1	0.297	1
7p-Amp	4q-Del	0.297	1
5q-Del	Amp_17q12	0.297	1
Amp_17q12	Amp_19p13.2	0.297	1
Del_5q12.1	Del_10q21.1	0.297	1
IQCD	Del_21q11.2	0.298	1
13q-Amp	21q-Del	0.298	1
SOX9	12p-Amp	0.299	1
STARD3NL	Del_10q25.2	0.299	1
NF2	5q-Del	0.299	1
12p-Amp	20q-Amp	0.299	1
Amp_13q12.13	Del_5q22.2	0.299	1
Del_3q26.31	Del_4q35.1	0.299	1
ZFP36L2	Del_15q21.1	0.3	1
B2M	CDH1	0.3	1
SMAD2	Amp_11p15.5	0.3	1
ZBTB20	Del_3p14.2	0.3	1
Amp_5q22.3	Amp_11p15.5	0.3	1
Amp_11p15.5	Del_12p13.1	0.3	1
ZFP36L2	Del_10q21.1	0.301	1
TXNDC2	SMAD2	0.301	1
TXNDC2	Del_12p13.1	0.301	1
SMAD2	Del_19p13.3	0.301	1
GGT1	CTNNB1	0.301	1
EGR1	PRRG1	0.301	1
MVK	PLEKHF2	0.301	1
PLEKHF2	PRRG1	0.301	1
PLEKHF2	BIRC3	0.301	1
PRRG1	VCX2	0.301	1
VCX2	17p-Del	0.301	1
VCX2	Amp_10q22.3	0.301	1
GMNN	Del_17p12	0.301	1
17q-Amp	Del_6q26	0.301	1
1q-Amp	Amp_8p11.21	0.301	1
Amp_8p11.23	Del_5q22.2	0.301	1
CRIPAK	CDK12	0.302	1
Amp_6p21.1	Del_18q21.2	0.302	1
TXNDC2	ALG12	0.303	1
TXNDC2	C14orf184	0.303	1
FMN2	STARD3NL	0.303	1
FMN2	NR1H3	0.303	1
FMN2	16q-Amp	0.303	1
GGT1	Del_4p16.2	0.303	1
DIP2B	Del_10q21.1	0.303	1
IFT57	ZNF486	0.303	1
C14orf184	Del_6p25.3	0.303	1
C14orf184	Del_6q26	0.303	1
16q-Amp	15q-Del	0.303	1
2q-Amp	Amp_13q12.2	0.303	1
14q-Del	Del_16p13.3	0.303	1
Amp_13q12.13	Del_3q26.31	0.303	1
Del_16p13.3	Del_21q11.2	0.303	1
FAM123B	PTGDR	0.304	1
PTCH1	Amp_8q24.21	0.304	1
SMAD4	Amp_8p11.23	0.304	1
8q-Amp	Amp_5q22.3	0.304	1
8q-Amp	Del_4q35.1	0.304	1
8q-Amp	Del_12p13.1	0.304	1
APC	PLAGL2	0.305	1
ZFP36L2	TPRKB	0.305	1
ACVR1B	PIK3R1	0.305	1
GGT1	16p-Amp	0.305	1
RPTN	HIST1H1T	0.305	1
FBXW7	BIRC3	0.305	1
SLC26A8	Del_16q23.1	0.305	1
RBBP7	HIST1H1T	0.305	1
HIST1H1T	Del_8q11.1	0.305	1
1q-Amp	22q-Del	0.305	1
Amp_8q12.1	Amp_10q22.3	0.305	1
Amp_8q12.1	Del_4q35.1	0.305	1
Amp_13q12.2	Del_3p14.2	0.305	1
SOX9	RHOA	0.306	1
VCX2	Del_15q15.2	0.306	1
C2orf29	PRPS1	0.306	1
SLC26A8	Del_7q31.1	0.306	1
L1TD1	PRPS1	0.306	1
L1TD1	Del_7q31.1	0.306	1
FKBP9	PRPS1	0.306	1
ALDH1A3	Del_7q31.1	0.306	1
PTGDR	Del_16p13.3	0.306	1
Del_7q31.1	Del_16p13.3	0.306	1
APC	Del_15q21.1	0.307	1
ERBB2	NLRC4	0.307	1
SMAD4	22q-Del	0.307	1
20q-Amp	Amp_12p13.32	0.307	1
6p-Amp	Amp_20q12	0.307	1
7p-Amp	4p-Del	0.307	1
7q-Amp	Del_14q11.2	0.307	1
17p-Del	Amp_16p11.2	0.307	1
ZFP36L2	Amp_8p11.23	0.308	1
SMAD4	Amp_5q22.3	0.308	1
SMAD4	Del_12p13.1	0.308	1
PTGDR	Amp_13q12.13	0.308	1
16p-Amp	Amp_8p11.23	0.308	1
APC	SELPLG	0.309	1
APC	L1TD1	0.309	1
ATXN3L	Del_15q22.33	0.309	1
VCX2	Del_17p12	0.309	1
Amp_8q12.1	Del_15q15.2	0.309	1
Amp_19p13.2	Del_15q22.33	0.309	1
20p-Amp	21q-Del	0.31	1
8p-Del	Amp_17q24.1	0.31	1
FAM123B	DDX26B	0.311	1
ACVR1B	NEXN	0.311	1
ACVR1B	Amp_2q33.1	0.311	1
FMN2	Amp_5q22.3	0.311	1
ATXN3L	KDM6A	0.311	1
ERBB2	P2RY13	0.311	1
ERBB2	16q-Amp	0.311	1
NR1H3	Amp_1q31.1	0.311	1
DIP2B	1p-Del	0.311	1
MPHOSPH10	9p-Amp	0.311	1
CTNNB1	Del_6p25.3	0.311	1
CTNNB1	Del_6q26	0.311	1
16q-Amp	Amp_1q31.1	0.311	1
FAM123B	Del_15q22.33	0.312	1
ZFP36L2	NF1	0.312	1
GGT1	21q-Del	0.312	1
GGT1	22q-Del	0.312	1
NF1	16p-Amp	0.312	1
PCBP1	Del_4q22.1	0.312	1
SETD2	IDH1	0.312	1
PRPS1	Amp_12p13.32	0.312	1
HIST1H1T	21q-Del	0.312	1
GMNN	18p-Del	0.312	1
Del_3p14.2	Del_15q11.2	0.312	1
CRIPAK	PLAGL2	0.313	1
BCOR	PLAGL2	0.313	1
SMAD2	12p-Amp	0.313	1
FMN2	ERBB2	0.313	1
OR4D10	FAM9A	0.313	1
OR4D10	THOC7	0.313	1
OR4D10	RSPH3	0.313	1
THOC7	GMPS	0.313	1
GRB2	DDX26B	0.313	1
RSPH3	GMPS	0.313	1
VCX2	Del_14q11.2	0.313	1
VCX2	Del_15q21.1	0.313	1
RBPJ	Del_2q22.1	0.313	1
B2M	BMPR2	0.314	1
SMAD2	6p-Amp	0.314	1
CTNNB1	Del_5q21.2	0.314	1
17q-Amp	6p-Amp	0.314	1
2p-Amp	Amp_5q22.3	0.314	1
SMAD4	FKBP9	0.315	1
ALDH1A3	8p-Amp	0.315	1
8p-Amp	Amp_1q31.1	0.315	1
RHOA	NF1	0.316	1
SLC12A6	IDH1	0.316	1
ZNF486	Amp_8p11.21	0.316	1
SOX9	Del_3p14.2	0.317	1
ZFP36L2	Del_15q11.2	0.317	1
ACVR1B	NF2	0.318	1
NF2	Amp_16p11.2	0.318	1
RLIM	Del_5q21.2	0.318	1
BCORL1	8q-Amp	0.318	1
CDK12	12p-Amp	0.318	1
9p-Amp	Amp_13q22.1	0.318	1
Amp_8p11.21	Del_1p36.11	0.318	1
STARD3NL	ST3GAL6	0.319	1
STARD3NL	PLEKHF2	0.319	1
NF2	Del_4q35.1	0.319	1
EGR1	NR1H3	0.319	1
EGR1	PCBP1	0.319	1
EGR1	DCLK2	0.319	1
EGR1	FYN	0.319	1
EGR1	GPATCH8	0.319	1
PRKDC	ATXN3L	0.319	1
ST3GAL6	PCBP1	0.319	1
ST3GAL6	FYN	0.319	1
PLEKHF2	DCLK2	0.319	1
PLEKHF2	FYN	0.319	1
VCX2	GPATCH8	0.319	1
PRPS1	Del_5q22.2	0.319	1
1q-Amp	Del_12p13.1	0.319	1
Amp_13q12.13	Del_5q12.1	0.319	1
Amp_19p13.2	Del_22q13.32	0.319	1
APC	Del_10q21.1	0.32	1
CRIPAK	SLC26A8	0.32	1
CRIPAK	ALDH1A3	0.32	1
CRIPAK	CTNNB1	0.32	1
CRIPAK	Del_16p13.3	0.32	1
ACVR1B	PTCH1	0.32	1
BCOR	SLC26A8	0.32	1
BCOR	L1TD1	0.32	1
BCOR	CTNNB1	0.32	1
BCOR	Del_16p13.3	0.32	1
GGT1	ROS1	0.32	1
GGT1	1p-Del	0.32	1
TPRKB	RLIM	0.32	1
C11orf30	Amp_12p13.32	0.32	1
PIK3R1	Del_2q22.1	0.32	1
ROS1	HIST1H1T	0.32	1
RBPJ	Amp_8q24.21	0.32	1
PRPS1	5q-Del	0.32	1
HIST1H1T	1p-Del	0.32	1
20p-Del	Amp_8q24.21	0.32	1
Amp_17q12	Del_17q24.3	0.32	1
Del_3q26.31	Del_7q31.1	0.32	1
APC	MGA	0.321	1
B2M	Amp_12p13.32	0.321	1
TXNDC2	CHUK	0.321	1
TXNDC2	4q-Del	0.321	1
EGR1	ASXL1	0.321	1
VCX2	Amp_8p11.23	0.321	1
VCX2	Del_14q31.1	0.321	1
17p-Del	Amp_8p11.23	0.321	1
4q-Del	Del_6p25.3	0.321	1
TP53	FMN2	0.322	1
TP53	FBXW7	0.322	1
RHOA	PRRG1	0.322	1
RHOA	Amp_10q22.3	0.322	1
PRKDC	6p-Amp	0.322	1
IQCD	Amp_10q22.3	0.322	1
PLAGL2	DIP2B	0.322	1
PRRG1	IFT57	0.322	1
IFT57	Amp_10q22.3	0.322	1
BIRC3	ZNF486	0.322	1
ATM	Del_7q31.1	0.322	1
ZNF486	Amp_10q22.3	0.322	1
STARD3NL	Del_1p33	0.323	1
FBXW7	ASXL1	0.323	1
RBPJ	SMAD4	0.323	1
SMAD4	GMPS	0.323	1
SMAD4	Del_5q22.2	0.323	1
GMNN	Amp_17q24.1	0.323	1
2q-Amp	Del_14q11.2	0.323	1
Amp_8q24.21	Del_19p13.3	0.323	1
FAM123B	Del_5q22.2	0.324	1
WNT1	BCL9	0.324	1
WNT1	NLRC4	0.324	1
WNT1	SLC12A6	0.324	1
ALG12	NLRC4	0.324	1
ALG12	SLC12A6	0.324	1
C14orf184	BCORL1	0.324	1
ATM	8p-Amp	0.324	1
ASXL1	MAP4K3	0.325	1
VCX2	18p-Del	0.325	1
IDH1	Amp_17q12	0.325	1
1p-Del	Del_10q21.1	0.325	1
Amp_6p21.1	Del_1p13.2	0.325	1
CHUK	6p-Amp	0.326	1
C11orf30	2p-Amp	0.326	1
12p-Amp	Del_4q22.1	0.326	1
20p-Amp	1p-Del	0.326	1
4p-Del	Amp_5q22.3	0.326	1
Amp_5q22.3	Del_3p14.2	0.326	1
Amp_20q11.21	Del_3p26.3	0.326	1
Del_3p14.2	Del_12p13.1	0.326	1
FMN2	PRPS1	0.327	1
RHOA	MGA	0.327	1
IQCD	12p-Amp	0.327	1
ZNF486	Del_5q12.1	0.327	1
21q-Del	Amp_11p15.5	0.327	1
4q-Del	Amp_10q22.3	0.327	1
5q-Del	Del_16q23.1	0.327	1
Amp_2q33.1	Del_16q23.1	0.327	1
PTCH1	Amp_10q22.3	0.328	1
21q-Del	Amp_13q12.2	0.328	1
TP53	Del_12p13.1	0.329	1
PTEN	16q-Amp	0.329	1
ZFP36L2	GRB2	0.33	1
ZFP36L2	Del_2q22.1	0.33	1
RHOA	SMAD4	0.33	1
FAM9A	RPTN	0.33	1
RPTN	THOC7	0.33	1
RPTN	RSPH3	0.33	1
THOC7	RBBP7	0.33	1
THOC7	16p-Amp	0.33	1
THOC7	Del_8q11.1	0.33	1
GRB2	HLA-A	0.33	1
PIK3R1	Del_16q23.1	0.33	1
RSPH3	RBBP7	0.33	1
16p-Amp	Del_2q22.1	0.33	1
1q-Amp	Del_10q23.31	0.33	1
RNF43	PLEKHF2	0.331	1
FBXW7	RSPH3	0.331	1
RSPH3	Amp_8q12.1	0.331	1
Amp_6p21.1	Del_5q22.2	0.331	1
IDH1	KDM6A	0.332	1
CTNNB1	Del_10q23.31	0.332	1
20q-Amp	9p-Amp	0.332	1
7q-Amp	9p-Amp	0.332	1
8q-Amp	Del_15q22.33	0.332	1
Amp_1q31.1	Del_10q23.31	0.332	1
Amp_17q24.1	Del_10q23.31	0.332	1
PRPS1	IDH1	0.333	1
CREBBP	Amp_12p13.32	0.333	1
6p-Amp	Amp_20q13.31	0.333	1
Del_10q25.2	Del_16q23.1	0.333	1
ACVR1B	ALG12	0.334	1
ACVR1B	2q-Amp	0.334	1
GGT1	SLC26A8	0.334	1
GGT1	Del_16p13.3	0.334	1
SELPLG	TPRKB	0.334	1
SELPLG	HIST1H1T	0.334	1
MAPK6	HIST1H1T	0.334	1
TPRKB	SLC26A8	0.334	1
TPRKB	L1TD1	0.334	1
TPRKB	ALDH1A3	0.334	1
TPRKB	Del_16p13.3	0.334	1
PTCH1	8p-Amp	0.334	1
L1TD1	HIST1H1T	0.334	1
FKBP9	HIST1H1T	0.334	1
C14orf184	KDM6A	0.334	1
C14orf184	Amp_16p11.2	0.334	1
HIST1H1T	Del_16p13.3	0.334	1
1q-Amp	20q-Amp	0.334	1
20p-Del	4p-Del	0.334	1
Amp_8q12.1	Del_15q22.33	0.334	1
CDH1	Amp_5q22.3	0.335	1
SELPLG	LARP4B	0.335	1
ASXL1	Del_15q21.1	0.335	1
DIP2B	C2orf29	0.335	1
C2orf29	LARP4B	0.335	1
RB1	Amp_10q22.3	0.335	1
CTNNB1	4p-Del	0.335	1
CTNNB1	Del_3p14.2	0.335	1
2p-Amp	14q-Del	0.335	1
Del_16p13.3	Del_17q24.3	0.335	1
APC	ST3GAL6	0.336	1
SOX9	TXNDC2	0.336	1
SMAD2	NLRC4	0.336	1
SELPLG	8q-Amp	0.336	1
BCL9	Del_12p13.1	0.336	1
VCX2	Amp_20p11.21	0.336	1
Amp_8q12.1	Del_15q21.1	0.336	1
SOX9	PTCH1	0.337	1
ZFP36L2	MLH1	0.337	1
B2M	ST3GAL6	0.337	1
OR4D10	PLEKHF2	0.337	1
OR4D10	VCX2	0.337	1
EGR1	GMPS	0.337	1
NF1	7q-Amp	0.337	1
MGA	12p-Amp	0.337	1
IQCD	Del_3p14.2	0.337	1
PLEKHF2	GMPS	0.337	1
VCX2	DDX26B	0.337	1
FAM123B	TXNDC2	0.338	1
NF1	12p-Amp	0.338	1
RLIM	Amp_8q12.1	0.338	1
12p-Amp	Amp_20q13.31	0.338	1
6p-Amp	Del_19p13.3	0.338	1
17p-Del	Amp_8q12.1	0.338	1
SMAD2	SETD2	0.339	1
C11orf30	12p-Amp	0.339	1
1q-Amp	Amp_6p21.1	0.339	1
Amp_5q22.3	Del_17p12	0.339	1
Amp_8q24.21	Del_2q22.1	0.339	1
Amp_20q13.31	Del_10q25.2	0.339	1
Del_6p25.3	Del_8p23.2	0.339	1
TXNDC2	TOP2B	0.34	1
ATXN3L	14q-Del	0.34	1
ERBB2	GMPS	0.34	1
ALPK2	8p-Amp	0.34	1
RLIM	CDK12	0.34	1
7p-Amp	9p-Amp	0.34	1
20p-Del	Del_2p12	0.34	1
Amp_19p13.2	Del_21q11.2	0.34	1
STARD3NL	IQCD	0.341	1
STARD3NL	ZNF486	0.341	1
RHOA	P2RY13	0.341	1
RHOA	NR1H3	0.341	1
RHOA	PCBP1	0.341	1
RHOA	FYN	0.341	1
RHOA	GPATCH8	0.341	1
P2RY13	ZNF486	0.341	1
IQCD	NR1H3	0.341	1
IQCD	PCBP1	0.341	1
IQCD	DCLK2	0.341	1
NR1H3	ZNF486	0.341	1
PCBP1	ZNF486	0.341	1
DCLK2	ZNF486	0.341	1
BCORL1	Amp_8p11.21	0.341	1
ZNF486	16q-Amp	0.341	1
Amp_20q12	Del_10q23.31	0.341	1
ALG12	SMAD4	0.342	1
20p-Amp	Del_10q23.31	0.342	1
Amp_10q22.3	Del_21q11.2	0.342	1
Amp_16p11.2	Del_22q13.32	0.342	1
ARID1A	PLEKHF2	0.343	1
ARID1A	VCX2	0.343	1
BCOR	Del_3q26.31	0.343	1
MVK	BIRC3	0.343	1
PRRG1	BIRC3	0.343	1
15q-Del	Amp_6p21.1	0.343	1
MLH1	GGT1	0.344	1
SELPLG	7p-Amp	0.344	1
SELPLG	Amp_8q24.21	0.344	1
VCX2	Del_18q22.1	0.344	1
WNT1	Del_16q23.1	0.345	1
NR1H3	ATM	0.345	1
PIK3R1	5q-Del	0.345	1
KDM6A	Del_1p33	0.345	1
8p-Amp	Amp_19p13.2	0.345	1
GGT1	PTCH1	0.346	1
FAM9A	RLIM	0.346	1
THOC7	Del_4p16.2	0.346	1
GRB2	7q-Amp	0.346	1
GRB2	1p-Del	0.346	1
GRB2	Del_5q21.2	0.346	1
RSPH3	MPHOSPH10	0.346	1
PRPS1	Amp_5q22.3	0.346	1
17q-Amp	Del_7q31.1	0.346	1
1p-Del	Del_2q22.1	0.346	1
Amp_12p13.32	Del_18q22.1	0.346	1
Del_6p25.3	Del_15q15.2	0.346	1
APC	RLIM	0.347	1
FYN	Del_10q23.31	0.347	1
RHOA	SETD2	0.348	1
SETD2	ZNF486	0.348	1
13q-Amp	Amp_11p15.5	0.348	1
GGT1	ATXN3L	0.349	1
GGT1	5q-Del	0.349	1
GGT1	Amp_2q33.1	0.349	1
GGT1	Amp_19p13.2	0.349	1
STARD3NL	Del_4q35.1	0.349	1
NF2	NR1H3	0.349	1
TPRKB	NEXN	0.349	1
TPRKB	Del_3q26.31	0.349	1
BCL9	SMAD4	0.349	1
C2orf29	8p-Del	0.349	1
NEXN	HIST1H1T	0.349	1
HIST1H1T	Amp_19p13.2	0.349	1
APC	TOP2B	0.35	1
APC	Del_6p25.3	0.35	1
TXNDC2	Amp_11p15.5	0.35	1
TXNDC2	Amp_12p13.32	0.35	1
ERBB2	Del_16q23.1	0.35	1
FKBP9	Del_10q21.1	0.35	1
1q-Amp	2p-Amp	0.35	1
1q-Amp	6p-Amp	0.35	1
4q-Del	Amp_1q31.1	0.35	1
Amp_11p15.5	Del_6q26	0.35	1
Amp_11p15.5	Del_19p13.3	0.35	1
Amp_12p13.32	Del_6q26	0.35	1
Amp_12p13.32	Del_19p13.3	0.35	1
Del_1p13.2	Del_6p25.3	0.35	1
Del_2q22.1	Del_8p23.2	0.35	1
Del_5q21.2	Del_16p13.3	0.35	1
Del_10q21.1	Del_16p13.3	0.35	1
8q-Amp	Del_3p26.3	0.351	1
FAM123B	HIST1H1T	0.352	1
APC	Del_21q11.2	0.353	1
SOX9	ALPK2	0.353	1
B2M	Del_1p33	0.353	1
CDH1	ALG12	0.353	1
C11orf30	Del_3p14.2	0.353	1
VCX2	Amp_13q12.2	0.353	1
Amp_17q12	Del_12p13.1	0.353	1
CRIPAK	Del_10q25.2	0.354	1
TP53	ASXL1	0.354	1
ZFP36L2	ST3GAL6	0.354	1
ACVR1B	17q-Amp	0.354	1
ACVR1B	Del_12p13.1	0.354	1
SMAD2	KDM6A	0.354	1
RPTN	VCX2	0.354	1
ST3GAL6	HLA-A	0.354	1
VCX2	HLA-A	0.354	1
Amp_16p11.2	Del_12p13.1	0.354	1
CRIPAK	WNT1	0.355	1
CRIPAK	ALG12	0.355	1
BCOR	ALG12	0.355	1
ST3GAL6	8q-Amp	0.355	1
RBBP7	Del_10q25.2	0.355	1
ATM	IDH1	0.355	1
CTNNB1	9p-Amp	0.355	1
20p-Amp	Del_21q11.2	0.355	1
8q-Amp	Amp_11p15.5	0.356	1
8p-Del	Amp_11p15.5	0.356	1
CHUK	BCORL1	0.357	1
Amp_20q11.21	Del_10q25.2	0.357	1
Del_6q26	Del_14q11.2	0.357	1
Del_14q11.2	Del_19p13.3	0.357	1
NR1H3	CREBBP	0.358	1
ASXL1	ZNF486	0.358	1
PTCH1	Del_16p13.3	0.358	1
PCBP1	CREBBP	0.358	1
16q-Amp	Del_15q22.33	0.358	1
1q-Amp	Amp_20q11.21	0.358	1
9p-Amp	Amp_20q11.21	0.358	1
B2M	ZNF486	0.359	1
TXNDC2	1q-Amp	0.359	1
STARD3NL	4q-Del	0.359	1
OR4D10	IQCD	0.359	1
RHOA	DDX26B	0.359	1
RHOA	RBPJ	0.359	1
CHUK	PRPS1	0.359	1
C11orf30	PTGDR	0.359	1
DIP2B	Amp_19p13.2	0.359	1
DIP2B	Del_3q26.31	0.359	1
RBPJ	ZNF486	0.359	1
TOP2B	1q-Amp	0.359	1
LARP4B	NEXN	0.359	1
LARP4B	Del_3q26.31	0.359	1
GMPS	ZNF486	0.359	1
1q-Amp	Del_6q26	0.359	1
1q-Amp	Del_19p13.3	0.359	1
9p-Amp	Del_3q26.31	0.359	1
22q-Del	Amp_16p11.2	0.359	1
Amp_6p21.1	Del_7q31.1	0.359	1
EGR1	PIK3R1	0.36	1
EGR1	8p-Amp	0.36	1
C11orf30	SMAD4	0.36	1
VCX2	Del_18q21.2	0.36	1
CTNNB1	Del_2q22.1	0.36	1
GGT1	Amp_12p13.32	0.361	1
MAPK6	RSPH3	0.361	1
THOC7	L1TD1	0.361	1
THOC7	FKBP9	0.361	1
THOC7	ALDH1A3	0.361	1
GRB2	SLC26A8	0.361	1
NLRC4	2p-Amp	0.361	1
NLRC4	6p-Amp	0.361	1
RSPH3	SLC26A8	0.361	1
RSPH3	ALDH1A3	0.361	1
C2orf29	Del_2q22.1	0.361	1
L1TD1	Del_2q22.1	0.361	1
FKBP9	Del_2q22.1	0.361	1
BCORL1	2p-Amp	0.361	1
BCORL1	6p-Amp	0.361	1
ATM	Amp_12p13.32	0.361	1
Amp_10q22.3	Del_5q12.1	0.361	1
Del_2q22.1	Del_16p13.3	0.361	1
Del_15q22.33	Del_16q23.1	0.361	1
APC	FAM123B	0.362	1
STARD3NL	Amp_10q22.3	0.362	1
MVK	FYN	0.362	1
P2RY13	PRRG1	0.362	1
P2RY13	BIRC3	0.362	1
ASXL1	Del_5q22.2	0.362	1
PRRG1	PCBP1	0.362	1
PRRG1	DCLK2	0.362	1
BIRC3	16q-Amp	0.362	1
ATM	Amp_8q24.21	0.362	1
13q-Amp	Del_1p33	0.362	1
Amp_13q22.1	Del_16p13.3	0.362	1
Amp_20p11.21	Del_8q11.1	0.362	1
ARID1A	Del_4q35.1	0.363	1
GGT1	ZBTB20	0.363	1
GGT1	IDH1	0.363	1
PRKDC	Amp_8q12.1	0.363	1
FBXW7	Amp_5q22.3	0.363	1
TPRKB	ZBTB20	0.363	1
TPRKB	MAP4K3	0.363	1
SMAD4	Amp_1q31.1	0.363	1
ATM	Amp_1q31.1	0.363	1
HIST1H1T	IDH1	0.363	1
Amp_5q22.3	Amp_8q12.1	0.363	1
NF2	Del_7q31.1	0.364	1
PRPS1	Del_4q35.1	0.364	1
WNT1	9p-Amp	0.365	1
SELPLG	CDK12	0.365	1
MAPK6	CDK12	0.365	1
MGA	Del_6p25.3	0.365	1
ALG12	DIP2B	0.365	1
DIP2B	C14orf184	0.365	1
C2orf29	CDK12	0.365	1
TOP2B	12p-Amp	0.365	1
C14orf184	LARP4B	0.365	1
C14orf184	9p-Amp	0.365	1
ALDH1A3	CDK12	0.365	1
12p-Amp	Del_6q26	0.365	1
2p-Amp	Del_18p11.31	0.365	1
2q-Amp	9p-Amp	0.365	1
Amp_11p15.5	Del_4q35.1	0.365	1
Amp_11p15.5	Del_10q25.2	0.365	1
CRIPAK	MAP4K3	0.366	1
BCOR	IDH1	0.366	1
C11orf30	PTEN	0.366	1
Amp_8q24.21	Del_1p36.11	0.366	1
Del_5q21.2	Del_14q11.2	0.366	1
STARD3NL	Del_22q13.32	0.367	1
SELPLG	RB1	0.367	1
PRKDC	NR1H3	0.367	1
PRKDC	PCBP1	0.367	1
8p-Amp	17p-Del	0.367	1
TXNDC2	Amp_8p11.23	0.368	1
ERBB2	HLA-A	0.368	1
CDK12	Amp_12p13.32	0.368	1
20q-Amp	Del_3p14.2	0.368	1
8q-Amp	Del_1p36.11	0.368	1
20p-Del	Amp_12p13.32	0.368	1
Amp_1q31.1	Del_8q11.1	0.368	1
Amp_17q24.1	Del_8q11.1	0.368	1
Del_6p25.3	Del_14q31.1	0.368	1
TP53	PLEKHF2	0.369	1
Amp_8q24.21	Amp_10q22.3	0.369	1
Amp_13q12.13	Del_3p14.2	0.369	1
FAM123B	Del_15q21.1	0.37	1
CDH1	Del_5q22.2	0.37	1
GMNN	8q-Amp	0.37	1
Del_3q26.31	Del_17p12	0.37	1
SOX9	DCLK2	0.371	1
PLEKHF2	RLIM	0.371	1
RLIM	VCX2	0.371	1
VCX2	1p-Del	0.371	1
ZNF486	Amp_8p11.23	0.371	1
APC	GMNN	0.372	1
TXNDC2	PRPS1	0.372	1
TXNDC2	PTGDR	0.372	1
TXNDC2	13q-Amp	0.372	1
TXNDC2	Del_7q31.1	0.372	1
BCOR	ERBB2	0.372	1
SELPLG	Del_15q15.2	0.372	1
TOP2B	PRPS1	0.372	1
PRPS1	Del_6p25.3	0.372	1
BIRC3	4p-Del	0.372	1
20p-Amp	Del_1p33	0.372	1
18q-Del	Del_3p14.2	0.372	1
4p-Del	Amp_10q22.3	0.372	1
Del_6p25.3	Del_7q31.1	0.372	1
MVK	Amp_8p11.21	0.373	1
GRB2	13q-Amp	0.373	1
ROS1	C2orf29	0.373	1
13q-Amp	Del_2q22.1	0.373	1
Amp_1q31.1	Del_8p22	0.373	1
Amp_8p11.21	Amp_10q22.3	0.373	1
Del_16q23.1	Del_22q13.32	0.373	1
ASXL1	Amp_11p15.5	0.374	1
Amp_17q12	Del_1p13.2	0.374	1
Del_3q26.31	Del_10q21.1	0.374	1
ACVR1B	C11orf30	0.375	1
CHUK	KDM6A	0.375	1
VCX2	20q-Amp	0.375	1
FAM9A	NEXN	0.376	1
FAM9A	Amp_2q33.1	0.376	1
THOC7	ATXN3L	0.376	1
THOC7	Del_3q26.31	0.376	1
ATXN3L	Del_2q22.1	0.376	1
GRB2	Del_3q26.31	0.376	1
PIK3R1	IDH1	0.376	1
RSPH3	Amp_2q33.1	0.376	1
RSPH3	Del_3q26.31	0.376	1
ROS1	Amp_12p13.32	0.376	1
IDH1	8p-Amp	0.376	1
CTNNB1	Del_8p22	0.376	1
1q-Amp	Amp_11p15.5	0.376	1
1q-Amp	Del_1p13.2	0.376	1
20q-Amp	Del_10q23.31	0.376	1
8p-Amp	Amp_13q22.1	0.376	1
5q-Del	Del_2q22.1	0.376	1
Amp_2q33.1	Del_2q22.1	0.376	1
Amp_13q12.2	Del_6q26	0.376	1
Amp_19p13.2	Del_2q22.1	0.376	1
TP53	STARD3NL	0.377	1
TP53	GPATCH8	0.377	1
ZFP36L2	IQCD	0.377	1
SMAD2	HIST1H1T	0.377	1
GGT1	17q-Amp	0.377	1
RPTN	IQCD	0.377	1
RPTN	IFT57	0.377	1
BCL9	Del_6p25.3	0.377	1
IQCD	HLA-A	0.377	1
NLRC4	Del_6p25.3	0.377	1
HLA-A	ZNF486	0.377	1
BCORL1	Del_6p25.3	0.377	1
HIST1H1T	15q-Del	0.377	1
ZNF486	16p-Amp	0.377	1
BCOR	NF2	0.378	1
9p-Amp	Del_17p12	0.378	1
APC	Del_10q25.2	0.379	1
ZFP36L2	FMN2	0.379	1
FMN2	16p-Amp	0.379	1
THOC7	20p-Amp	0.379	1
16p-Amp	15q-Del	0.379	1
17q-Amp	Del_15q22.33	0.379	1
21q-Del	Amp_1q31.1	0.379	1
21q-Del	Amp_17q24.1	0.379	1
ALPK2	Amp_6p21.1	0.38	1
ASXL1	Amp_6p21.1	0.38	1
CTNNB1	Del_8p23.2	0.38	1
20p-Amp	Del_19p13.3	0.38	1
OR4D10	MVK	0.381	1
P2RY13	PTCH1	0.381	1
PTCH1	16q-Amp	0.381	1
PRRG1	GMPS	0.381	1
PIK3R1	Del_17q24.3	0.381	1
DDX26B	BIRC3	0.381	1
RBPJ	BIRC3	0.381	1
GMPS	BIRC3	0.381	1
8p-Amp	Del_17q24.3	0.381	1
18q-Del	Amp_19p13.2	0.381	1
NF1	Amp_16p11.2	0.382	1
MGA	SMAD4	0.382	1
PIK3R1	Del_10q23.31	0.382	1
MAP4K3	Del_17q24.3	0.382	1
8p-Amp	Del_17p12	0.382	1
1p-Del	Del_10q25.2	0.382	1
4q-Del	Amp_8p11.21	0.382	1
Amp_19p13.2	Del_5q21.2	0.382	1
APC	8q-Amp	0.383	1
TP53	RLIM	0.383	1
FAM123B	RLIM	0.383	1
STARD3NL	NR1H3	0.383	1
STARD3NL	PCBP1	0.383	1
STARD3NL	DCLK2	0.383	1
STARD3NL	GPATCH8	0.383	1
STARD3NL	Amp_11p15.5	0.383	1
P2RY13	FYN	0.383	1
PCBP1	DCLK2	0.383	1
PCBP1	FYN	0.383	1
DCLK2	16q-Amp	0.383	1
PTEN	Amp_1q31.1	0.383	1
TXNDC2	Amp_13q22.1	0.384	1
WNT1	CDK12	0.384	1
FMN2	Del_5q22.2	0.384	1
C14orf184	20p-Del	0.384	1
BCORL1	Amp_8q12.1	0.384	1
1q-Amp	Del_7q31.1	0.384	1
2p-Amp	Del_17p12	0.384	1
2q-Amp	20p-Del	0.384	1
Amp_13q22.1	Del_6q26	0.384	1
APC	Del_15q11.2	0.385	1
SOX9	SLC12A6	0.385	1
MLH1	SLC12A6	0.385	1
GGT1	Del_4q22.1	0.385	1
APC	MLH1	0.386	1
APC	THOC7	0.386	1
APC	GRB2	0.386	1
BCOR	8p-Del	0.386	1
8q-Amp	Del_10q23.31	0.386	1
SELPLG	PLEKHF2	0.387	1
EGR1	ALDH1A3	0.387	1
PLEKHF2	C2orf29	0.387	1
PLEKHF2	SLC26A8	0.387	1
PLEKHF2	L1TD1	0.387	1
PLEKHF2	FKBP9	0.387	1
VCX2	C2orf29	0.387	1
VCX2	FKBP9	0.387	1
7p-Amp	21q-Del	0.387	1
22q-Del	Del_16q23.1	0.387	1
Amp_1q31.1	Del_1p13.2	0.387	1
APC	ZFP36L2	0.388	1
APC	HLA-A	0.388	1
APC	Del_8q11.1	0.388	1
CRIPAK	SMAD2	0.388	1
BCOR	SMAD2	0.388	1
VCX2	Amp_13q12.13	0.388	1
13q-Amp	Del_16p13.3	0.388	1
8q-Amp	Amp_19p13.2	0.388	1
8q-Amp	Del_3q26.31	0.388	1
TP53	Del_6p25.3	0.389	1
ROS1	Del_3p14.2	0.389	1
VCX2	Del_4p16.2	0.389	1
RB1	DCLK2	0.389	1
SETD2	GMNN	0.389	1
ATM	Amp_8q12.1	0.389	1
16p-Amp	Del_4q22.1	0.389	1
ATXN3L	CDK12	0.39	1
TPRKB	C11orf30	0.39	1
TPRKB	Amp_6p21.1	0.39	1
CDK12	Del_3q26.31	0.39	1
20p-Del	Amp_2q33.1	0.39	1
TP53	KDM6A	0.391	1
MLH1	GRB2	0.391	1
MLH1	RSPH3	0.391	1
FAM9A	MAP4K3	0.391	1
FAM9A	IDH1	0.391	1
THOC7	ZBTB20	0.391	1
THOC7	MAP4K3	0.391	1
THOC7	IDH1	0.391	1
ZBTB20	RSPH3	0.391	1
ALDH1A3	Amp_8p11.23	0.391	1
MAP4K3	Del_2q22.1	0.391	1
7p-Amp	Del_10q25.2	0.391	1
CRIPAK	CREBBP	0.392	1
VCX2	Amp_20q11.21	0.392	1
CTNNB1	Del_21q11.2	0.392	1
18p-Del	Amp_19p13.2	0.392	1
Amp_8q12.1	Del_15q11.2	0.392	1
Amp_8q24.21	Del_8q11.1	0.392	1
TP53	9p-Amp	0.393	1
MLH1	7p-Amp	0.393	1
SELPLG	FBXW7	0.393	1
FBXW7	SLC26A8	0.393	1
FBXW7	L1TD1	0.393	1
ERBB2	DIP2B	0.393	1
ATM	7p-Amp	0.393	1
GMNN	18q-Del	0.393	1
9p-Amp	Amp_1q31.1	0.393	1
9p-Amp	Amp_17q24.1	0.393	1
9p-Amp	Del_15q11.2	0.393	1
Amp_1q31.1	Del_17q24.3	0.393	1
Amp_6p21.1	Del_16q23.1	0.393	1
Del_3p26.3	Del_16q23.1	0.393	1
Del_7q31.1	Del_21q11.2	0.393	1
FAM123B	FBXW7	0.394	1
TXNDC2	SETD2	0.394	1
ATXN3L	21q-Del	0.394	1
MVK	ASXL1	0.394	1
PIK3R1	Del_4q35.1	0.394	1
C14orf184	7q-Amp	0.394	1
NEXN	22q-Del	0.394	1
CTNNB1	Del_5q22.2	0.394	1
12p-Amp	Amp_17q12	0.394	1
21q-Del	Amp_19p13.2	0.394	1
22q-Del	Amp_19p13.2	0.394	1
Amp_17q12	Del_5q12.1	0.394	1
SELPLG	BMPR2	0.395	1
MGA	NR1H3	0.395	1
MGA	16q-Amp	0.395	1
ERBB2	ROS1	0.395	1
P2RY13	12p-Amp	0.395	1
IQCD	RLIM	0.395	1
PLAGL2	Amp_8p11.21	0.395	1
RLIM	ZNF486	0.395	1
DCLK2	12p-Amp	0.395	1
13q-Amp	Del_10q25.2	0.395	1
2p-Amp	Del_14q31.1	0.395	1
Amp_8p11.21	Del_2p12	0.395	1
TXNDC2	ACVR1B	0.396	1
TXNDC2	Amp_16p11.2	0.396	1
BCL9	PRPS1	0.396	1
BCL9	PTGDR	0.396	1
BCL9	Del_7q31.1	0.396	1
ALPK2	GMNN	0.396	1
ASXL1	GMNN	0.396	1
ASXL1	Del_5q21.2	0.396	1
SLC12A6	PRPS1	0.396	1
14q-Del	Amp_8p11.23	0.396	1
1p-Del	Amp_17q24.1	0.396	1
ATXN3L	7p-Amp	0.397	1
7q-Amp	Del_1p13.2	0.397	1
Amp_12p13.32	Del_18q12.2	0.397	1
Amp_17q12	Del_4q22.1	0.397	1
EGR1	21q-Del	0.398	1
PLEKHF2	21q-Del	0.398	1
MAP4K3	Del_10q21.1	0.398	1
FAM123B	FAM9A	0.399	1
FAM123B	GRB2	0.399	1
FAM123B	Del_2q22.1	0.399	1
IQCD	PIK3R1	0.399	1
RBPJ	CREBBP	0.399	1
ZNF486	8p-Amp	0.399	1
1q-Amp	Del_8p23.2	0.399	1
2p-Amp	18p-Del	0.399	1
RPTN	MVK	0.4	1
RPTN	BIRC3	0.4	1
MVK	Del_8q11.1	0.4	1
PRRG1	Del_8q11.1	0.4	1
SMAD4	BIRC3	0.4	1
RBBP7	Amp_10q22.3	0.4	1
BIRC3	16p-Amp	0.4	1
CTNNB1	7p-Amp	0.4	1
16p-Amp	Amp_10q22.3	0.4	1
SELPLG	Del_15q11.2	0.401	1
EGR1	Amp_8q12.1	0.401	1
FBXW7	VCX2	0.401	1
ST3GAL6	Amp_8q12.1	0.401	1
ROS1	Del_16q23.1	0.401	1
Del_3p14.2	Del_10q25.2	0.401	1
Del_10q23.31	Del_16q23.1	0.401	1
Amp_8q12.1	Del_17q24.3	0.402	1
RNF43	GMNN	0.403	1
SOX9	OR4D10	0.403	1
SOX9	DDX26B	0.403	1
SOX9	GMPS	0.403	1
B2M	STARD3NL	0.403	1
B2M	PCBP1	0.403	1
B2M	DCLK2	0.403	1
STARD3NL	DDX26B	0.403	1
STARD3NL	RBPJ	0.403	1
OR4D10	P2RY13	0.403	1
OR4D10	NR1H3	0.403	1
OR4D10	16q-Amp	0.403	1
ATXN3L	PLEKHF2	0.403	1
PLEKHF2	NEXN	0.403	1
NR1H3	RBPJ	0.403	1
ALG12	BMPR2	0.403	1
PCBP1	RBPJ	0.403	1
PCBP1	GMPS	0.403	1
VCX2	5q-Del	0.403	1
VCX2	Amp_2q33.1	0.403	1
VCX2	Amp_19p13.2	0.403	1
DDX26B	FYN	0.403	1
RBPJ	DCLK2	0.403	1
C14orf184	BMPR2	0.403	1
21q-Del	Amp_13q12.13	0.403	1
Amp_10q22.3	Del_15q15.2	0.403	1
TXNDC2	HIST1H1T	0.404	1
TPRKB	TOP2B	0.404	1
TPRKB	Del_6p25.3	0.404	1
TOP2B	HIST1H1T	0.404	1
PRPS1	8q-Amp	0.404	1
HIST1H1T	Del_6p25.3	0.404	1
1q-Amp	Amp_8p11.23	0.404	1
1q-Amp	Del_14q31.1	0.404	1
CRIPAK	Del_22q13.32	0.405	1
FAM123B	Del_15q11.2	0.405	1
SMAD2	Del_17q24.3	0.405	1
ERBB2	Del_5q12.1	0.405	1
ERBB2	Del_8p23.2	0.405	1
PTCH1	5q-Del	0.405	1
DIP2B	6p-Amp	0.405	1
RLIM	Del_5q22.2	0.405	1
MPHOSPH10	Del_5q22.2	0.405	1
SLC12A6	Del_1p36.11	0.405	1
12p-Amp	Amp_17q24.1	0.405	1
1q-Amp	4p-Del	0.405	1
9p-Amp	Amp_5q22.3	0.405	1
Amp_8q12.1	Del_4q22.1	0.405	1
ZFP36L2	7q-Amp	0.406	1
SMAD2	FAM9A	0.406	1
SMAD2	8p-Amp	0.406	1
STARD3NL	4p-Del	0.406	1
FAM9A	Amp_5q22.3	0.406	1
ATXN3L	ROS1	0.406	1
PTCH1	Amp_8q12.1	0.406	1
RSPH3	17q-Amp	0.406	1
RSPH3	Del_12p13.1	0.406	1
DCLK2	4p-Del	0.406	1
DCLK2	Del_3p14.2	0.406	1
CREBBP	12p-Amp	0.406	1
1q-Amp	15q-Del	0.406	1
7q-Amp	Del_8q11.1	0.406	1
Amp_6p21.1	Del_17p12	0.406	1
MLH1	ALDH1A3	0.407	1
5q-Del	Amp_20p11.21	0.407	1
Amp_8q24.21	Del_4q35.1	0.407	1
Amp_20q11.21	Del_10q23.31	0.407	1
Del_1p36.11	Del_3p14.2	0.407	1
ZFP36L2	Del_10q23.31	0.408	1
MLH1	Del_8p23.2	0.408	1
RPTN	Del_10q23.31	0.408	1
RBBP7	Del_10q23.31	0.408	1
PTGDR	KDM6A	0.408	1
7p-Amp	Del_6q26	0.408	1
Amp_17q12	Del_6q26	0.408	1
DIP2B	Del_4q35.1	0.409	1
Del_10q25.2	Del_16p13.3	0.409	1
SOX9	KDM6A	0.41	1
PRPS1	Del_8p23.2	0.41	1
PTGDR	7p-Amp	0.41	1
NF1	Del_16p13.3	0.411	1
DIP2B	Del_1p33	0.411	1
CREBBP	8p-Amp	0.411	1
7q-Amp	Del_4q22.1	0.411	1
20p-Del	Del_4q22.1	0.411	1
Amp_8q24.21	Del_3q26.31	0.411	1
Amp_10q22.3	Del_15q21.1	0.411	1
SELPLG	RHOA	0.412	1
MAPK6	IFT57	0.412	1
RHOA	FKBP9	0.412	1
RHOA	ALDH1A3	0.412	1
ATXN3L	Del_15q15.2	0.412	1
IQCD	SLC26A8	0.412	1
IFT57	Del_16p13.3	0.412	1
C2orf29	ZNF486	0.412	1
1q-Amp	8p-Del	0.412	1
8q-Amp	Del_4q22.1	0.412	1
Amp_2q33.1	Del_15q15.2	0.412	1
ALG12	Del_10q25.2	0.413	1
2q-Amp	Del_10q25.2	0.413	1
14q-Del	Amp_5q22.3	0.413	1
SMAD4	TOP2B	0.414	1
SMAD4	Del_6p25.3	0.414	1
ATM	1q-Amp	0.414	1
IDH1	20p-Del	0.414	1
Amp_6p21.1	Del_15q22.33	0.414	1
Amp_8q12.1	Del_3p26.3	0.414	1
Amp_20q13.31	Del_3p14.2	0.414	1
14q-Del	Del_10q25.2	0.415	1
21q-Del	Amp_17q12	0.415	1
Amp_17q12	Del_3p14.2	0.415	1
SOX9	PLAGL2	0.416	1
THOC7	SMAD4	0.416	1
SLC12A6	12p-Amp	0.416	1
15q-Del	1p-Del	0.416	1
ACVR1B	1q-Amp	0.417	1
GGT1	Del_4q35.1	0.417	1
NF2	TPRKB	0.417	1
BCL9	BCORL1	0.417	1
RSPH3	Del_5q22.2	0.417	1
HIST1H1T	1q-Amp	0.417	1
KDM6A	1q-Amp	0.417	1
Amp_20q12	Del_10q25.2	0.417	1
MVK	MPHOSPH10	0.418	1
PRRG1	MPHOSPH10	0.418	1
RLIM	BIRC3	0.418	1
MPHOSPH10	BIRC3	0.418	1
MPHOSPH10	Amp_10q22.3	0.418	1
1q-Amp	Amp_20p11.21	0.418	1
FAM123B	SELPLG	0.419	1
FAM123B	Del_16p13.3	0.419	1
MLH1	MGA	0.419	1
MLH1	12p-Amp	0.419	1
THOC7	Del_18p11.31	0.419	1
CTNNB1	Del_4q35.1	0.419	1
8p-Del	Del_3p14.2	0.419	1
FAM9A	CHUK	0.42	1
THOC7	CHUK	0.42	1
CHUK	GRB2	0.42	1
GRB2	Amp_6p21.1	0.42	1
RSPH3	Amp_6p21.1	0.42	1
SMAD4	BMPR2	0.42	1
CDK12	Del_15q15.2	0.42	1
PRPS1	Del_16q23.1	0.42	1
PTGDR	Del_16q23.1	0.42	1
Amp_6p21.1	Del_2q22.1	0.42	1
ARID1A	SELPLG	0.421	1
CDH1	2p-Amp	0.421	1
BMPR2	Amp_19p13.2	0.421	1
16p-Amp	4q-Del	0.421	1
17p-Del	Amp_6p21.1	0.421	1
RNF43	TXNDC2	0.422	1
ZFP36L2	P2RY13	0.422	1
ZFP36L2	DCLK2	0.422	1
ZFP36L2	FYN	0.422	1
STARD3NL	Del_8q11.1	0.422	1
RPTN	FYN	0.422	1
ATXN3L	Del_14q11.2	0.422	1
ATXN3L	Del_15q21.1	0.422	1
NR1H3	HLA-A	0.422	1
PTCH1	1q-Amp	0.422	1
SMAD4	4p-Del	0.422	1
DCLK2	16p-Amp	0.422	1
NEXN	Del_14q11.2	0.422	1
9p-Amp	Del_15q22.33	0.422	1
Amp_2q33.1	Del_15q21.1	0.422	1
Amp_19p13.2	Del_14q11.2	0.422	1
Del_10q21.1	Del_12p13.1	0.422	1
OR4D10	DDX26B	0.423	1
DDX26B	GMPS	0.423	1
RBPJ	GMPS	0.423	1
20p-Amp	Del_17q24.3	0.423	1
PIK3R1	GMNN	0.424	1
C2orf29	Amp_17q24.1	0.424	1
GMNN	Del_18q12.2	0.424	1
FMN2	FAM9A	0.425	1
FMN2	GRB2	0.425	1
CHUK	Del_22q13.32	0.425	1
CTNNB1	Del_1p13.2	0.425	1
15q-Del	Del_2q22.1	0.425	1
17p-Del	Amp_11p15.5	0.425	1
Amp_13q12.13	Del_6q26	0.425	1
Amp_20p11.21	Del_17q24.3	0.425	1
2p-Amp	20p-Del	0.426	1
9p-Amp	Del_5q21.2	0.426	1
Del_3q26.31	Del_8p23.2	0.426	1
VCX2	Amp_20q12	0.427	1
FAM123B	KDM6A	0.428	1
B2M	12p-Amp	0.428	1
FBXW7	DDX26B	0.428	1
FBXW7	GMPS	0.428	1
ATXN3L	IFT57	0.428	1
IQCD	5q-Del	0.428	1
IQCD	Amp_19p13.2	0.428	1
IQCD	Del_3q26.31	0.428	1
IFT57	NEXN	0.428	1
IFT57	Amp_2q33.1	0.428	1
RBPJ	12p-Amp	0.428	1
RBPJ	Amp_8q12.1	0.428	1
ZNF486	5q-Del	0.428	1
ZNF486	Amp_2q33.1	0.428	1
ZNF486	Del_3q26.31	0.428	1
8q-Amp	Del_3p14.2	0.428	1
TP53	CREBBP	0.429	1
GGT1	BCORL1	0.429	1
TPRKB	BCL9	0.429	1
TPRKB	SLC12A6	0.429	1
IQCD	Del_5q21.2	0.429	1
ALPK2	PCBP1	0.429	1
ASXL1	DCLK2	0.429	1
NLRC4	HIST1H1T	0.429	1
FYN	Amp_17q12	0.429	1
BCORL1	HIST1H1T	0.429	1
ZFP36L2	Del_4q35.1	0.43	1
SELPLG	Amp_20q11.21	0.43	1
ATXN3L	Amp_13q12.2	0.43	1
ZBTB20	SMAD4	0.43	1
SMAD4	MAP4K3	0.43	1
SMAD4	IDH1	0.43	1
SLC26A8	Amp_12p13.32	0.43	1
CRIPAK	PRPS1	0.431	1
CRIPAK	PTGDR	0.431	1
CDH1	SLC26A8	0.431	1
BCOR	PTGDR	0.431	1
C14orf184	Del_1p33	0.431	1
PTGDR	13q-Amp	0.431	1
8p-Amp	20p-Del	0.431	1
APC	DDX26B	0.432	1
APC	RBPJ	0.432	1
CRIPAK	TXNDC2	0.432	1
TXNDC2	BCOR	0.432	1
BCOR	Del_6p25.3	0.432	1
BCOR	Del_19p13.3	0.432	1
FBXW7	Amp_16p11.2	0.432	1
PLAGL2	12p-Amp	0.432	1
BCORL1	Del_3p14.2	0.432	1
CREBBP	Del_3p14.2	0.432	1
KDM6A	Amp_8q12.1	0.432	1
Del_2p12	Del_5q12.1	0.432	1
Del_3p14.2	Del_15q22.33	0.432	1
ARID1A	Del_5q21.2	0.433	1
MLH1	Del_8p22	0.433	1
GGT1	PRKDC	0.433	1
PRKDC	HIST1H1T	0.433	1
SMAD4	Del_15q11.2	0.433	1
CDK12	Del_15q21.1	0.433	1
Amp_19p13.2	Del_14q31.1	0.433	1
SOX9	ZFP36L2	0.434	1
SOX9	RPTN	0.434	1
SOX9	Del_16q23.1	0.434	1
TXNDC2	FAM9A	0.434	1
TXNDC2	THOC7	0.434	1
TXNDC2	GRB2	0.434	1
SMAD2	PLEKHF2	0.434	1
FAM9A	TOP2B	0.434	1
NF1	7p-Amp	0.434	1
ST3GAL6	Amp_5q22.3	0.434	1
PLEKHF2	Amp_5q22.3	0.434	1
RSPH3	TOP2B	0.434	1
8q-Amp	8p-Del	0.434	1
Del_2q22.1	Del_4q22.1	0.434	1
MLH1	VCX2	0.435	1
1q-Amp	Amp_17q12	0.435	1
SELPLG	PRRG1	0.436	1
SELPLG	BIRC3	0.436	1
SELPLG	Amp_10q22.3	0.436	1
MVK	C2orf29	0.436	1
ERBB2	CDK12	0.436	1
PTCH1	9p-Amp	0.436	1
DIP2B	Del_22q13.32	0.436	1
PRRG1	C2orf29	0.436	1
C2orf29	Amp_10q22.3	0.436	1
SMAD4	Del_8p22	0.436	1
ALDH1A3	BIRC3	0.436	1
PRPS1	20p-Amp	0.436	1
1q-Amp	Del_18q22.1	0.436	1
Amp_10q22.3	Del_16p13.3	0.436	1
Amp_19p13.2	Del_10q25.2	0.436	1
Del_3q26.31	Del_10q25.2	0.436	1
ACVR1B	BCORL1	0.437	1
RB1	Del_5q21.2	0.437	1
BCORL1	KDM6A	0.437	1
SLC12A6	KDM6A	0.437	1
8p-Amp	Amp_10q22.3	0.437	1
8p-Amp	Amp_13q12.13	0.437	1
MLH1	Del_15q22.33	0.438	1
SELPLG	Del_1p33	0.438	1
L1TD1	Del_1p33	0.438	1
PTEN	8p-Amp	0.438	1
1p-Del	Del_10q23.31	0.438	1
Amp_1q31.1	Amp_20q11.21	0.438	1
Amp_13q22.1	Del_3q26.31	0.438	1
NF2	Del_10q21.1	0.439	1
CDK12	Del_12p13.1	0.439	1
17q-Amp	20p-Del	0.439	1
Amp_8p11.23	Del_4q35.1	0.439	1
ZFP36L2	7p-Amp	0.44	1
B2M	Del_3p14.2	0.44	1
OR4D10	4p-Del	0.44	1
ZBTB20	8q-Amp	0.44	1
C14orf184	8p-Del	0.44	1
16p-Amp	Del_15q22.33	0.44	1
APC	HIST1H1T	0.441	1
RNF43	PCBP1	0.441	1
ACVR1B	12p-Amp	0.441	1
STARD3NL	RLIM	0.441	1
STARD3NL	1p-Del	0.441	1
NF1	Del_6p25.3	0.441	1
MGA	Amp_16p11.2	0.441	1
DIP2B	21q-Del	0.441	1
DIP2B	22q-Del	0.441	1
PCBP1	RLIM	0.441	1
ACVR1B	Amp_12p13.32	0.442	1
GGT1	Amp_16p11.2	0.442	1
THOC7	Del_17p12	0.442	1
Amp_20q11.21	Del_7q31.1	0.442	1
ZFP36L2	B2M	0.443	1
OR4D10	16p-Amp	0.443	1
RPTN	GMPS	0.443	1
DIP2B	Del_7q31.1	0.443	1
LARP4B	Del_7q31.1	0.443	1
Amp_2q33.1	Del_15q11.2	0.443	1
Amp_8p11.23	Del_14q11.2	0.443	1
Del_3q26.31	Del_15q11.2	0.443	1
Del_7q31.1	Del_17q24.3	0.443	1
RHOA	MAP4K3	0.444	1
RHOA	IDH1	0.444	1
ZBTB20	IFT57	0.444	1
IFT57	IDH1	0.444	1
IDH1	ZNF486	0.444	1
CTNNB1	Del_15q22.33	0.444	1
Amp_8q12.1	Amp_11p15.5	0.444	1
FAM123B	EGR1	0.445	1
FAM123B	PLEKHF2	0.445	1
PTGDR	Amp_8q12.1	0.445	1
Amp_5q22.3	Del_4p16.2	0.445	1
Del_5q21.2	Del_12p13.1	0.445	1
ALG12	PTCH1	0.446	1
PTCH1	2q-Amp	0.446	1
BMPR2	6p-Amp	0.446	1
CDK12	Amp_8p11.23	0.446	1
1q-Amp	8q-Amp	0.446	1
20p-Del	Amp_8p11.23	0.446	1
ZFP36L2	Amp_11p15.5	0.447	1
RPTN	Amp_11p15.5	0.447	1
CHUK	7q-Amp	0.447	1
RBBP7	Amp_11p15.5	0.447	1
RBBP7	Del_1p13.2	0.447	1
7q-Amp	Del_3p26.3	0.447	1
Amp_8q12.1	Del_10q21.1	0.447	1
TXNDC2	CREBBP	0.448	1
EGR1	Del_3p26.3	0.448	1
THOC7	1q-Amp	0.448	1
RSPH3	1q-Amp	0.448	1
VCX2	Amp_6p21.1	0.448	1
VCX2	Del_3p26.3	0.448	1
HIST1H1T	14q-Del	0.448	1
HIST1H1T	Del_21q11.2	0.448	1
8p-Amp	Amp_11p15.5	0.448	1
Amp_6p21.1	Amp_20p11.21	0.448	1
TP53	HLA-A	0.449	1
TP53	16p-Amp	0.449	1
TP53	6p-Amp	0.449	1
TP53	Del_8q11.1	0.449	1
SELPLG	Del_18p11.31	0.449	1
FBXW7	Del_3q26.31	0.449	1
C14orf184	Del_10q23.31	0.449	1
IDH1	7p-Amp	0.449	1
Amp_6p21.1	Del_21q11.2	0.449	1
Amp_8q12.1	Del_3q26.31	0.449	1
Del_16p13.3	Del_18p11.31	0.449	1
TP53	RSPH3	0.45	1
TP53	Amp_10q22.3	0.45	1
TXNDC2	DIP2B	0.45	1
TXNDC2	9p-Amp	0.45	1
CDH1	Del_5q21.2	0.45	1
SMAD4	Del_16q23.1	0.45	1
LARP4B	Del_6p25.3	0.45	1
GMNN	21q-Del	0.45	1
9p-Amp	Del_6p25.3	0.45	1
Del_1p13.2	Del_10q23.31	0.45	1
ZFP36L2	PRKDC	0.451	1
ZFP36L2	Del_22q13.32	0.451	1
THOC7	NF1	0.451	1
THOC7	Amp_8p11.21	0.451	1
ATXN3L	ERBB2	0.451	1
ERBB2	Del_3q26.31	0.451	1
GRB2	Amp_8p11.21	0.451	1
16p-Amp	Del_22q13.32	0.451	1
APC	ACVR1B	0.453	1
FMN2	MAPK6	0.453	1
ATXN3L	Amp_10q22.3	0.453	1
MVK	NEXN	0.453	1
NLRC4	8p-Del	0.453	1
C2orf29	15q-Del	0.453	1
NEXN	Amp_10q22.3	0.453	1
7q-Amp	1p-Del	0.453	1
15q-Del	Del_16p13.3	0.453	1
APC	4p-Del	0.454	1
CDH1	Amp_10q22.3	0.454	1
ST3GAL6	Amp_12p13.32	0.454	1
PLEKHF2	Amp_12p13.32	0.454	1
PTGDR	Del_10q21.1	0.454	1
HIST1H1T	Del_16q23.1	0.454	1
Amp_8p11.23	Del_3p14.2	0.454	1
ASXL1	PLAGL2	0.455	1
KDM6A	Del_5q22.2	0.455	1
BCORL1	Del_16q23.1	0.456	1
SLC12A6	Del_16q23.1	0.456	1
ACVR1B	KDM6A	0.457	1
PRPS1	Amp_8p11.23	0.457	1
PTGDR	Amp_8p11.23	0.457	1
9p-Amp	17p-Del	0.457	1
CRIPAK	SOX9	0.458	1
FAM123B	Amp_1q31.1	0.459	1
STARD3NL	SELPLG	0.459	1
STARD3NL	MAPK6	0.459	1
SELPLG	PCBP1	0.459	1
SELPLG	16q-Amp	0.459	1
MAPK6	NR1H3	0.459	1
MAPK6	DCLK2	0.459	1
MAPK6	FYN	0.459	1
THOC7	18p-Del	0.459	1
ERBB2	ASXL1	0.459	1
NR1H3	SLC26A8	0.459	1
PCBP1	C2orf29	0.459	1
PCBP1	SLC26A8	0.459	1
PCBP1	L1TD1	0.459	1
PCBP1	FKBP9	0.459	1
PCBP1	ALDH1A3	0.459	1
16q-Amp	Del_16p13.3	0.459	1
FAM123B	Del_3p14.2	0.46	1
ZFP36L2	12p-Amp	0.46	1
ZFP36L2	Del_5q12.1	0.46	1
SMAD2	IQCD	0.46	1
SMAD2	IFT57	0.46	1
RHOA	Amp_5q22.3	0.46	1
RPTN	MGA	0.46	1
RPTN	Del_5q12.1	0.46	1
IQCD	17q-Amp	0.46	1
PTCH1	8q-Amp	0.46	1
16p-Amp	Del_5q12.1	0.46	1
THOC7	BCORL1	0.461	1
RB1	IDH1	0.461	1
SLC12A6	Del_2q22.1	0.461	1
Amp_8p11.21	Amp_19p13.2	0.461	1
CHUK	CDK12	0.462	1
RLIM	GMPS	0.462	1
MPHOSPH10	RBPJ	0.462	1
RBPJ	1p-Del	0.462	1
20p-Del	Amp_6p21.1	0.462	1
20p-Del	Del_3p26.3	0.462	1
ZFP36L2	RPTN	0.463	1
ZFP36L2	RBBP7	0.463	1
ZFP36L2	Del_8q11.1	0.463	1
TXNDC2	ST3GAL6	0.463	1
EGR1	Del_6p25.3	0.463	1
RPTN	HLA-A	0.463	1
PLEKHF2	TOP2B	0.463	1
PLEKHF2	Del_19p13.3	0.463	1
DIP2B	Del_21q11.2	0.463	1
VCX2	TOP2B	0.463	1
SETD2	Del_1p33	0.463	1
PRPS1	Del_8p22	0.463	1
Del_7q31.1	Del_8p22	0.463	1
APC	IDH1	0.464	1
ASXL1	GMPS	0.464	1
PTGDR	Del_15q11.2	0.464	1
Amp_16p11.2	Del_14q11.2	0.464	1
ATXN3L	Del_1p33	0.465	1
CDK12	PRPS1	0.465	1
CDK12	Del_7q31.1	0.465	1
20q-Amp	Del_10q25.2	0.465	1
Amp_8q12.1	Del_19p13.3	0.465	1
CRIPAK	GGT1	0.466	1
CRIPAK	TPRKB	0.466	1
SOX9	WNT1	0.466	1
SOX9	2q-Amp	0.466	1
MGA	Del_16q23.1	0.466	1
6p-Amp	Amp_17q24.1	0.466	1
Amp_17q12	Del_4q35.1	0.466	1
NF2	Del_10q23.31	0.467	1
STARD3NL	Amp_8p11.23	0.468	1
NF2	GRB2	0.468	1
NF2	RSPH3	0.468	1
NF2	Del_2q22.1	0.468	1
FBXW7	8q-Amp	0.468	1
P2RY13	Amp_8p11.23	0.468	1
GPATCH8	Amp_8p11.23	0.468	1
20p-Del	Del_4q35.1	0.468	1
PRRG1	Del_5q21.2	0.469	1
VCX2	20p-Amp	0.469	1
SMAD4	DCLK2	0.469	1
BIRC3	Del_4p16.2	0.469	1
BIRC3	Del_5q21.2	0.469	1
1q-Amp	Del_4q35.1	0.469	1
Amp_10q22.3	Del_4p16.2	0.469	1
ERBB2	8p-Del	0.47	1
PLAGL2	8q-Amp	0.47	1
9p-Amp	Amp_20q13.31	0.47	1
Amp_8q24.21	Del_4q22.1	0.47	1
SMAD2	BMPR2	0.471	1
EGR1	PTCH1	0.471	1
GMNN	Del_18q22.1	0.471	1
CTNNB1	1p-Del	0.471	1
9p-Amp	Del_8p22	0.471	1
Amp_12p13.32	Del_16q23.1	0.471	1
Amp_13q12.2	Del_2p12	0.471	1
ZFP36L2	Del_3p14.2	0.472	1
RPTN	Del_3p14.2	0.472	1
VCX2	15q-Del	0.472	1
HLA-A	Del_3p14.2	0.472	1
1q-Amp	Del_17q24.3	0.472	1
20q-Amp	Del_2q22.1	0.472	1
Amp_8q12.1	Del_10q23.31	0.472	1
Amp_20q12	Del_3p14.2	0.472	1
ACVR1B	SETD2	0.473	1
MLH1	Del_15q15.2	0.473	1
ZBTB20	Amp_8p11.23	0.473	1
MAP4K3	Amp_8p11.23	0.473	1
IDH1	Amp_8p11.23	0.473	1
ACVR1B	FAM9A	0.474	1
STARD3NL	8p-Amp	0.474	1
FAM9A	KDM6A	0.474	1
THOC7	Amp_16p11.2	0.474	1
P2RY13	8p-Amp	0.474	1
NR1H3	8p-Amp	0.474	1
GRB2	KDM6A	0.474	1
PCBP1	PIK3R1	0.474	1
RSPH3	KDM6A	0.474	1
DCLK2	8p-Amp	0.474	1
GPATCH8	8p-Amp	0.474	1
Amp_16p11.2	Del_2q22.1	0.474	1
Amp_20q12	Del_7q31.1	0.474	1
CRIPAK	NLRC4	0.475	1
FAM123B	RB1	0.475	1
SELPLG	Amp_20q12	0.475	1
RHOA	CHUK	0.475	1
RHOA	C11orf30	0.475	1
RHOA	CTNNB1	0.475	1
RHOA	Del_3p26.3	0.475	1
CHUK	IFT57	0.475	1
CHUK	ZNF486	0.475	1
IQCD	CTNNB1	0.475	1
IFT57	Amp_6p21.1	0.475	1
ZNF486	CTNNB1	0.475	1
7p-Amp	Del_2p12	0.475	1
Amp_8q24.21	Del_10q25.2	0.475	1
ACVR1B	Del_16q23.1	0.476	1
STARD3NL	ATXN3L	0.476	1
STARD3NL	NEXN	0.476	1
THOC7	CREBBP	0.476	1
ATXN3L	P2RY13	0.476	1
ATXN3L	NR1H3	0.476	1
P2RY13	NEXN	0.476	1
P2RY13	Amp_19p13.2	0.476	1
P2RY13	Del_3q26.31	0.476	1
NR1H3	NEXN	0.476	1
ALG12	Amp_8q24.21	0.476	1
SMAD4	Amp_8p11.21	0.476	1
SMAD4	Del_15q21.1	0.476	1
DCLK2	Amp_2q33.1	0.476	1
DCLK2	Amp_19p13.2	0.476	1
GPATCH8	NEXN	0.476	1
GPATCH8	Amp_19p13.2	0.476	1
GPATCH8	Del_3q26.31	0.476	1
16q-Amp	5q-Del	0.476	1
16q-Amp	Del_3q26.31	0.476	1
Amp_6p21.1	Del_5q21.2	0.476	1
Amp_13q22.1	Del_2p12	0.476	1
Del_2q22.1	Del_15q22.33	0.476	1
RNF43	ERBB2	0.477	1
ZFP36L2	8p-Del	0.477	1
RPTN	8p-Del	0.477	1
ATXN3L	Amp_13q12.13	0.477	1
ZBTB20	ERBB2	0.477	1
16q-Amp	Del_15q11.2	0.477	1
Amp_19p13.2	Del_5q22.2	0.477	1
Del_3q26.31	Del_5q22.2	0.477	1
TPRKB	DIP2B	0.478	1
TPRKB	9p-Amp	0.478	1
ASXL1	Del_15q15.2	0.478	1
DIP2B	HIST1H1T	0.478	1
RLIM	Del_8p23.2	0.478	1
VCX2	RB1	0.478	1
ATM	Amp_2q33.1	0.478	1
ATM	Amp_19p13.2	0.478	1
CTNNB1	2p-Amp	0.478	1
CTNNB1	6p-Amp	0.478	1
APC	P2RY13	0.479	1
NF1	2q-Amp	0.479	1
MVK	21q-Del	0.479	1
Del_16p13.3	Del_17p12	0.479	1
MLH1	15q-Del	0.48	1
CTNNB1	21q-Del	0.48	1
17q-Amp	Del_1p36.11	0.48	1
Amp_11p15.5	Del_4q22.1	0.48	1
B2M	C2orf29	0.481	1
SELPLG	DDX26B	0.481	1
OR4D10	C2orf29	0.481	1
OR4D10	ALDH1A3	0.481	1
OR4D10	Del_16p13.3	0.481	1
VCX2	Del_4q22.1	0.481	1
DDX26B	L1TD1	0.481	1
RBPJ	ALDH1A3	0.481	1
GMPS	Del_16p13.3	0.481	1
IDH1	Amp_20p11.21	0.481	1
Amp_13q12.13	Del_10q23.31	0.481	1
FAM123B	GMNN	0.482	1
GMNN	Del_18q21.2	0.482	1
7q-Amp	Del_21q11.2	0.482	1
8p-Amp	Amp_13q12.2	0.482	1
WNT1	MGA	0.483	1
RPTN	MPHOSPH10	0.483	1
MGA	ALG12	0.483	1
MGA	C14orf184	0.483	1
ALG12	12p-Amp	0.483	1
RLIM	RBBP7	0.483	1
RLIM	Del_8q11.1	0.483	1
ROS1	Del_10q21.1	0.483	1
C14orf184	12p-Amp	0.483	1
ATM	16p-Amp	0.483	1
2q-Amp	Del_5q12.1	0.483	1
Amp_17q12	Del_15q22.33	0.483	1
APC	Del_5q12.1	0.484	1
ZFP36L2	SETD2	0.484	1
MGA	Amp_8p11.21	0.484	1
PLAGL2	PIK3R1	0.484	1
RSPH3	Del_22q13.32	0.484	1
RBPJ	Amp_8p11.21	0.484	1
14q-Del	Del_6p25.3	0.484	1
TXNDC2	20p-Del	0.485	1
CDH1	Amp_12p13.32	0.485	1
CDH1	Del_7q31.1	0.485	1
RHOA	Amp_13q12.13	0.485	1
MVK	8q-Amp	0.485	1
PRRG1	8q-Amp	0.485	1
8q-Amp	Amp_10q22.3	0.485	1
SMAD2	PRRG1	0.486	1
OR4D10	Del_1p36.11	0.486	1
PTCH1	Amp_12p13.32	0.486	1
PRRG1	Amp_5q22.3	0.486	1
PRRG1	Del_12p13.1	0.486	1
BMPR2	PRPS1	0.486	1
BIRC3	Del_12p13.1	0.486	1
17q-Amp	Amp_10q22.3	0.486	1
Amp_10q22.3	Del_12p13.1	0.486	1
Amp_10q22.3	Del_17p12	0.486	1
SMAD2	Del_10q25.2	0.487	1
FAM9A	Del_16q23.1	0.487	1
THOC7	Del_16q23.1	0.487	1
Del_2q22.1	Del_16q23.1	0.487	1
FAM123B	IDH1	0.488	1
ACVR1B	Amp_17q12	0.488	1
THOC7	Amp_13q12.2	0.488	1
8p-Del	Amp_8p11.23	0.488	1
Amp_1q31.1	Amp_20p11.21	0.488	1
Del_3p14.2	Del_10q23.31	0.488	1
APC	21q-Del	0.489	1
TP53	CDH1	0.489	1
FMN2	5q-Del	0.489	1
FBXW7	Del_8q11.1	0.489	1
ATXN3L	15q-Del	0.489	1
15q-Del	Amp_19p13.2	0.489	1
15q-Del	Del_3q26.31	0.489	1
Amp_8q24.21	Del_6p25.3	0.489	1
Amp_20q11.21	Del_2q22.1	0.489	1
TXNDC2	IQCD	0.49	1
ZNF486	Del_6p25.3	0.49	1
ZNF486	Del_19p13.3	0.49	1
20p-Amp	Del_5q22.2	0.49	1
MLH1	Del_15q21.1	0.491	1
EGR1	BCL9	0.491	1
EGR1	NLRC4	0.491	1
MGA	RLIM	0.491	1
BCL9	PLEKHF2	0.491	1
BCL9	VCX2	0.491	1
ALG12	Del_3p14.2	0.491	1
RLIM	12p-Amp	0.491	1
RLIM	Del_5q12.1	0.491	1
VCX2	SLC12A6	0.491	1
C14orf184	Del_3p14.2	0.491	1
Amp_1q31.1	Del_18q22.1	0.491	1
Amp_12p13.32	Del_8p23.2	0.491	1
PIK3R1	4p-Del	0.492	1
IDH1	Del_1p33	0.492	1
RPTN	Del_18p11.31	0.493	1
ZBTB20	PCBP1	0.493	1
ZBTB20	GPATCH8	0.493	1
ZBTB20	16q-Amp	0.493	1
P2RY13	IDH1	0.493	1
NR1H3	MAP4K3	0.493	1
PCBP1	IDH1	0.493	1
DCLK2	IDH1	0.493	1
FYN	MAP4K3	0.493	1
7p-Amp	Amp_10q22.3	0.493	1
Amp_12p13.32	Del_18q21.2	0.493	1
SOX9	FKBP9	0.494	1
GGT1	Del_1p36.11	0.494	1
NF2	4q-Del	0.494	1
GRB2	Amp_13q22.1	0.494	1
SLC12A6	Del_17q24.3	0.494	1
1q-Amp	Del_22q13.32	0.494	1
8p-Del	Amp_16p11.2	0.494	1
Amp_17q12	Del_14q11.2	0.494	1
Amp_19p13.2	Del_10q23.31	0.494	1
B2M	Del_15q15.2	0.495	1
PCBP1	20p-Amp	0.495	1
APC	Del_1p33	0.496	1
CRIPAK	KDM6A	0.496	1
BCOR	Amp_16p11.2	0.496	1
PTCH1	Del_12p13.1	0.496	1
RB1	Amp_1q31.1	0.496	1
PTEN	1q-Amp	0.496	1
FAM123B	Del_15q15.2	0.497	1
PRKDC	20p-Del	0.497	1
7p-Amp	Del_1p36.11	0.497	1
Amp_17q12	Del_8q11.1	0.497	1
RHOA	Amp_12p13.32	0.498	1
SETD2	Del_16q23.1	0.498	1
9p-Amp	Amp_11p15.5	0.498	1
B2M	Amp_2q33.1	0.499	1
BCOR	THOC7	0.499	1
BCOR	GRB2	0.499	1
BCOR	Del_2q22.1	0.499	1
OR4D10	Amp_19p13.2	0.499	1
OR4D10	Del_3q26.31	0.499	1
ATXN3L	RBPJ	0.499	1
ATXN3L	GMPS	0.499	1
ALG12	SETD2	0.499	1
RBPJ	Amp_2q33.1	0.499	1
RBPJ	Amp_19p13.2	0.499	1
C14orf184	SETD2	0.499	1
Del_14q11.2	Del_16q23.1	0.499	1
ARID1A	Del_3p14.2	0.5	1
FMN2	GMNN	0.5	1
ZBTB20	Amp_12p13.32	0.5	1
GMNN	15q-Del	0.5	1
Amp_17q12	Del_22q13.32	0.5	1
APC	PTGDR	0.501	1
APC	Del_7q31.1	0.501	1
CRIPAK	Amp_12p13.32	0.501	1
GGT1	CDK12	0.501	1
THOC7	14q-Del	0.501	1
ASXL1	8q-Amp	0.501	1
PRRG1	Amp_6p21.1	0.501	1
CDK12	HIST1H1T	0.501	1
BIRC3	Del_3p26.3	0.501	1
4p-Del	Amp_8q24.21	0.501	1
Amp_10q22.3	Del_3p26.3	0.501	1
ZFP36L2	MAPK6	0.502	1
ZFP36L2	SLC26A8	0.502	1
ZFP36L2	L1TD1	0.502	1
ZFP36L2	FKBP9	0.502	1
SELPLG	RPTN	0.502	1
RPTN	C2orf29	0.502	1
NF1	Del_10q23.31	0.502	1
ERBB2	Del_12p13.1	0.502	1
PIK3R1	22q-Del	0.502	1
C2orf29	Del_8q11.1	0.502	1
ALDH1A3	Del_8q11.1	0.502	1
SETD2	Amp_12p13.32	0.502	1
16p-Amp	Del_16p13.3	0.502	1
17q-Amp	Amp_1q31.1	0.502	1
Amp_1q31.1	Del_12p13.1	0.502	1
Amp_5q22.3	Del_14q11.2	0.502	1
Amp_17q24.1	Del_12p13.1	0.502	1
ZBTB20	Amp_8q12.1	0.503	1
RLIM	MPHOSPH10	0.503	1
RLIM	1p-Del	0.503	1
MPHOSPH10	Del_3p14.2	0.503	1
MAP4K3	Amp_8q12.1	0.503	1
6p-Amp	4q-Del	0.503	1
Amp_16p11.2	Del_17p12	0.503	1
ACVR1B	PLEKHF2	0.504	1
ST3GAL6	KDM6A	0.504	1
PLEKHF2	Amp_16p11.2	0.504	1
VCX2	KDM6A	0.504	1
RHOA	1q-Amp	0.505	1
FBXW7	PLAGL2	0.505	1
FBXW7	Del_2p12	0.505	1
IQCD	1q-Amp	0.505	1
PLAGL2	Amp_8q12.1	0.505	1
C14orf184	13q-Amp	0.505	1
PRPS1	Amp_20q13.31	0.505	1
ATM	6p-Amp	0.505	1
ZNF486	1q-Amp	0.505	1
8p-Amp	Del_10q25.2	0.505	1
Amp_2q33.1	Del_8p22	0.505	1
Amp_20q13.31	Del_7q31.1	0.505	1
Del_3q26.31	Del_8p22	0.505	1
APC	NEXN	0.506	1
APC	Del_3q26.31	0.506	1
ARID1A	8p-Amp	0.506	1
SMAD2	RB1	0.506	1
PLAGL2	Del_5q21.2	0.506	1
RB1	Amp_5q22.3	0.506	1
RB1	Del_12p13.1	0.506	1
18p-Del	Amp_10q22.3	0.506	1
Del_2p12	Del_5q21.2	0.506	1
Del_4p16.2	Del_6p25.3	0.506	1
CRIPAK	4p-Del	0.507	1
CRIPAK	Del_3p14.2	0.507	1
STARD3NL	Del_4p16.2	0.507	1
SELPLG	Amp_11p15.5	0.507	1
SELPLG	Del_1p13.2	0.507	1
ERBB2	PRPS1	0.507	1
ERBB2	PTGDR	0.507	1
P2RY13	Del_5q21.2	0.507	1
IQCD	Del_5q22.2	0.507	1
C2orf29	Amp_11p15.5	0.507	1
C2orf29	Del_1p13.2	0.507	1
HIST1H1T	Del_8p23.2	0.507	1
Amp_1q31.1	Del_7q31.1	0.507	1
Amp_17q24.1	Del_7q31.1	0.507	1
MLH1	SMAD2	0.508	1
NF2	C2orf29	0.508	1
NF2	FKBP9	0.508	1
NF2	Del_16p13.3	0.508	1
NF1	Amp_8p11.23	0.508	1
ALPK2	C14orf184	0.508	1
ASXL1	ALG12	0.508	1
C14orf184	Amp_17q12	0.508	1
CDK12	1q-Amp	0.508	1
4q-Del	Amp_2q33.1	0.508	1
ZBTB20	Amp_8p11.21	0.509	1
SMAD4	SLC26A8	0.509	1
HIST1H1T	Del_14q11.2	0.509	1
IDH1	Amp_8p11.21	0.509	1
Amp_6p21.1	Del_18q12.2	0.509	1
Amp_8q24.21	Del_17q24.3	0.509	1
SMAD2	STARD3NL	0.51	1
SMAD2	NR1H3	0.51	1
SMAD2	FYN	0.51	1
SMAD2	GPATCH8	0.51	1
SMAD2	16q-Amp	0.51	1
STARD3NL	Amp_5q22.3	0.51	1
P2RY13	17q-Amp	0.51	1
NR1H3	Amp_5q22.3	0.51	1
NR1H3	Del_12p13.1	0.51	1
PCBP1	Amp_5q22.3	0.51	1
FYN	Amp_5q22.3	0.51	1
GPATCH8	Amp_5q22.3	0.51	1
GPATCH8	Del_12p13.1	0.51	1
GMPS	8p-Amp	0.51	1
4q-Del	Amp_8p11.23	0.51	1
Amp_8q24.21	Del_15q11.2	0.51	1
FAM9A	9p-Amp	0.511	1
THOC7	Del_17q24.3	0.511	1
CHUK	Del_10q25.2	0.511	1
GRB2	LARP4B	0.511	1
GRB2	9p-Amp	0.511	1
DIP2B	RSPH3	0.511	1
RSPH3	9p-Amp	0.511	1
RSPH3	Del_17q24.3	0.511	1
RLIM	14q-Del	0.511	1
BMPR2	Amp_8p11.23	0.511	1
CTNNB1	Del_15q11.2	0.511	1
9p-Amp	Del_2q22.1	0.511	1
18p-Del	Del_7q31.1	0.511	1
Amp_6p21.1	Del_10q25.2	0.511	1
SOX9	2p-Amp	0.512	1
FMN2	Amp_8p11.21	0.512	1
7p-Amp	Del_1p13.2	0.512	1
15q-Del	Amp_8p11.21	0.512	1
SMAD2	Amp_8p11.23	0.513	1
FMN2	Del_3p14.2	0.513	1
PLAGL2	21q-Del	0.513	1
PTEN	Amp_19p13.2	0.513	1
ATM	Del_5q22.2	0.513	1
CTNNB1	8p-Amp	0.513	1
15q-Del	Del_3p14.2	0.513	1
Amp_5q22.3	Amp_8p11.23	0.513	1
TP53	MAPK6	0.514	1
TP53	Del_16p13.3	0.514	1
ACVR1B	DIP2B	0.514	1
EGR1	Amp_8p11.21	0.514	1
NF1	PLEKHF2	0.514	1
RNF43	C14orf184	0.515	1
FAM123B	Del_17q24.3	0.515	1
PTCH1	Del_5q22.2	0.515	1
DIP2B	12p-Amp	0.515	1
LARP4B	12p-Amp	0.515	1
1q-Amp	Amp_8q12.1	0.515	1
APC	Del_4p16.2	0.516	1
OR4D10	ZBTB20	0.516	1
NF2	VCX2	0.516	1
PLEKHF2	Del_4q35.1	0.516	1
PIK3R1	7p-Amp	0.516	1
SETD2	1p-Del	0.516	1
HIST1H1T	Del_14q31.1	0.516	1
Amp_20p11.21	Del_10q23.31	0.516	1
TXNDC2	MVK	0.517	1
TXNDC2	PRRG1	0.517	1
CDH1	Del_4q35.1	0.517	1
ST3GAL6	Del_16q23.1	0.517	1
PLEKHF2	Del_16q23.1	0.517	1
TOP2B	Amp_10q22.3	0.517	1
BIRC3	Del_6p25.3	0.517	1
Amp_10q22.3	Del_6p25.3	0.517	1
SELPLG	Amp_20p11.21	0.518	1
FYN	21q-Del	0.518	1
16q-Amp	22q-Del	0.518	1
Amp_20p11.21	Del_16p13.3	0.518	1
FAM123B	Del_21q11.2	0.519	1
MLH1	Del_10q23.31	0.519	1
RHOA	BCORL1	0.519	1
BCL9	IFT57	0.519	1
IQCD	BCORL1	0.519	1
C2orf29	Del_15q22.33	0.519	1
TOP2B	21q-Del	0.519	1
BMPR2	Del_6p25.3	0.519	1
1q-Amp	14q-Del	0.519	1
SOX9	NF2	0.52	1
ZFP36L2	NEXN	0.52	1
ZFP36L2	Amp_2q33.1	0.52	1
MAPK6	12p-Amp	0.52	1
RPTN	5q-Del	0.52	1
RPTN	Amp_19p13.2	0.52	1
ATXN3L	Del_8q11.1	0.52	1
MGA	Del_16p13.3	0.52	1
C2orf29	Del_5q12.1	0.52	1
SLC26A8	12p-Amp	0.52	1
RBBP7	Amp_19p13.2	0.52	1
HLA-A	NEXN	0.52	1
16p-Amp	5q-Del	0.52	1
16p-Amp	Del_3q26.31	0.52	1
BCOR	Del_15q15.2	0.521	1
SELPLG	Amp_20q13.31	0.521	1
SLC12A6	8p-Amp	0.521	1
PRPS1	Amp_20p11.21	0.521	1
HIST1H1T	Del_18q12.2	0.521	1
CTNNB1	Amp_8q12.1	0.521	1
6p-Amp	Amp_11p15.5	0.521	1
Amp_8q12.1	Del_3p14.2	0.521	1
Amp_19p13.2	Del_18p11.31	0.521	1
SELPLG	MPHOSPH10	0.522	1
RLIM	SLC26A8	0.522	1
RLIM	L1TD1	0.522	1
RLIM	FKBP9	0.522	1
RLIM	Del_16p13.3	0.522	1
L1TD1	1p-Del	0.522	1
ALDH1A3	1p-Del	0.522	1
Amp_17q24.1	Del_4q22.1	0.522	1
B2M	Del_15q11.2	0.523	1
CDH1	8p-Amp	0.523	1
OR4D10	Amp_8q24.21	0.523	1
FAM9A	Del_10q21.1	0.523	1
THOC7	Amp_13q12.13	0.523	1
THOC7	Del_10q21.1	0.523	1
FBXW7	HIST1H1T	0.523	1
RSPH3	Del_10q21.1	0.523	1
Amp_13q12.13	Del_2q22.1	0.523	1
ARID1A	TP53	0.524	1
NF2	Amp_8p11.21	0.525	1
VCX2	Del_15q22.33	0.525	1
SMAD4	Del_7q31.1	0.525	1
CREBBP	Del_22q13.32	0.525	1
CTNNB1	4q-Del	0.525	1
Amp_8p11.21	Del_4q35.1	0.525	1
Amp_12p13.32	Amp_17q12	0.525	1
TXNDC2	Amp_20q13.31	0.526	1
STARD3NL	C11orf30	0.526	1
STARD3NL	Amp_6p21.1	0.526	1
STARD3NL	Del_3p26.3	0.526	1
CHUK	P2RY13	0.526	1
CHUK	GPATCH8	0.526	1
P2RY13	Del_3p26.3	0.526	1
NR1H3	Amp_6p21.1	0.526	1
C11orf30	PCBP1	0.526	1
PCBP1	Del_3p26.3	0.526	1
RLIM	8p-Del	0.526	1
FYN	Amp_6p21.1	0.526	1
FYN	Del_3p26.3	0.526	1
16q-Amp	Del_3p26.3	0.526	1
Amp_17q12	Del_15q11.2	0.526	1
MLH1	Del_15q11.2	0.527	1
RB1	6p-Amp	0.527	1
Amp_1q31.1	Del_3p26.3	0.527	1
APC	Amp_17q24.1	0.528	1
TP53	IFT57	0.528	1
SMAD4	Amp_13q12.2	0.528	1
APC	MVK	0.529	1
CRIPAK	15q-Del	0.529	1
FAM123B	Amp_10q22.3	0.529	1
NF2	GMNN	0.529	1
PRKDC	C2orf29	0.529	1
BIRC3	CTNNB1	0.529	1
Amp_6p21.1	Del_15q15.2	0.529	1
Amp_20q11.21	Del_3p14.2	0.529	1
CRIPAK	VCX2	0.53	1
BCOR	PLEKHF2	0.53	1
BCL9	20p-Del	0.53	1
NLRC4	20p-Del	0.53	1
2p-Amp	Del_5q12.1	0.53	1
MVK	1q-Amp	0.531	1
DIP2B	4p-Del	0.531	1
PRRG1	1q-Amp	0.531	1
12p-Amp	Amp_11p15.5	0.531	1
Amp_17q24.1	Del_1p36.11	0.531	1
NF2	Amp_8q12.1	0.532	1
ROS1	Del_6p25.3	0.532	1
CTNNB1	Del_10q25.2	0.532	1
CRIPAK	Del_14q11.2	0.533	1
ACVR1B	IFT57	0.533	1
ACVR1B	Del_10q21.1	0.533	1
BCOR	Del_15q21.1	0.533	1
SMAD2	RBPJ	0.533	1
SMAD2	Amp_12p13.32	0.533	1
PRKDC	PLEKHF2	0.533	1
VCX2	Del_22q13.32	0.533	1
DDX26B	Del_12p13.1	0.533	1
RBPJ	17q-Amp	0.533	1
ZNF486	Amp_16p11.2	0.533	1
KDM6A	Del_10q21.1	0.533	1
8p-Del	Del_16q23.1	0.533	1
GGT1	Del_10q25.2	0.534	1
SELPLG	4p-Del	0.534	1
C2orf29	Del_3p14.2	0.534	1
SLC26A8	Del_3p14.2	0.534	1
L1TD1	Del_3p14.2	0.534	1
FKBP9	Del_3p14.2	0.534	1
Amp_16p11.2	Del_4q35.1	0.534	1
Amp_17q12	Del_21q11.2	0.534	1
THOC7	20p-Del	0.535	1
IDH1	Del_4q22.1	0.535	1
GMNN	Del_15q22.33	0.535	1
9p-Amp	Del_16q23.1	0.535	1
Del_16q23.1	Del_17q24.3	0.535	1
FAM123B	Del_10q23.31	0.536	1
SOX9	CREBBP	0.536	1
MVK	Amp_8q12.1	0.536	1
PRRG1	Amp_8q12.1	0.536	1
IDH1	4q-Del	0.536	1
Amp_11p15.5	Del_3q26.31	0.536	1
Amp_12p13.32	Amp_20q12	0.536	1
RNF43	Amp_8p11.23	0.537	1
ZFP36L2	Amp_8p11.21	0.537	1
OR4D10	Del_8p23.2	0.537	1
PRPS1	Amp_13q12.2	0.537	1
TP53	GGT1	0.538	1
ZFP36L2	IDH1	0.538	1
RPTN	IDH1	0.538	1
RBBP7	IDH1	0.538	1
HLA-A	MAP4K3	0.538	1
IDH1	Del_8q11.1	0.538	1
20p-Amp	Del_5q12.1	0.538	1
Amp_20p11.21	Del_1p36.11	0.538	1
CRIPAK	ASXL1	0.539	1
WNT1	8p-Amp	0.539	1
RPTN	Del_15q15.2	0.539	1
ERBB2	7q-Amp	0.539	1
ALG12	PIK3R1	0.539	1
PIK3R1	C14orf184	0.539	1
KDM6A	8q-Amp	0.539	1
16p-Amp	Del_15q15.2	0.539	1
2p-Amp	Del_3p14.2	0.539	1
6p-Amp	4p-Del	0.539	1
6p-Amp	Del_3p14.2	0.539	1
Amp_10q22.3	Amp_12p13.32	0.539	1
Amp_20q11.21	Del_3q26.31	0.539	1
Amp_20q13.31	Del_10q23.31	0.539	1
CDH1	7q-Amp	0.54	1
SELPLG	Amp_13q12.2	0.54	1
20p-Amp	22q-Del	0.54	1
8p-Amp	18p-Del	0.54	1
Amp_6p21.1	Del_15q21.1	0.54	1
ARID1A	OR4D10	0.541	1
TXNDC2	STARD3NL	0.541	1
TXNDC2	DCLK2	0.541	1
STARD3NL	Del_19p13.3	0.541	1
PRKDC	GMNN	0.541	1
ATXN3L	1p-Del	0.541	1
P2RY13	TOP2B	0.541	1
P2RY13	Del_19p13.3	0.541	1
NR1H3	Del_6p25.3	0.541	1
PCBP1	TOP2B	0.541	1
PCBP1	Del_6p25.3	0.541	1
PCBP1	Del_6q26	0.541	1
RLIM	5q-Del	0.541	1
RLIM	Del_3q26.31	0.541	1
MPHOSPH10	NEXN	0.541	1
MPHOSPH10	Amp_19p13.2	0.541	1
TOP2B	16q-Amp	0.541	1
DCLK2	Del_6p25.3	0.541	1
ATM	8q-Amp	0.541	1
Amp_8q24.21	Amp_11p15.5	0.541	1
Del_1p36.11	Del_17q24.3	0.541	1
SELPLG	C2orf29	0.542	1
SELPLG	L1TD1	0.542	1
SELPLG	ALDH1A3	0.542	1
SELPLG	Del_16p13.3	0.542	1
MAPK6	C2orf29	0.542	1
MAPK6	Del_16p13.3	0.542	1
C2orf29	SLC26A8	0.542	1
C2orf29	Del_16p13.3	0.542	1
FKBP9	Del_16p13.3	0.542	1
ALDH1A3	Del_16p13.3	0.542	1
PTGDR	Amp_13q22.1	0.542	1
ATM	12p-Amp	0.542	1
12p-Amp	8p-Del	0.542	1
20q-Amp	Del_12p13.1	0.542	1
2q-Amp	Del_18p11.31	0.542	1
Amp_13q22.1	Del_7q31.1	0.542	1
TXNDC2	Amp_13q12.2	0.543	1
PLEKHF2	9p-Amp	0.543	1
VCX2	LARP4B	0.543	1
9p-Amp	Del_5q22.2	0.543	1
Amp_6p21.1	Del_1p33	0.543	1
Amp_17q12	Del_5q22.2	0.543	1
Amp_20p11.21	Del_1p13.2	0.543	1
APC	SOX9	0.544	1
GGT1	Amp_17q24.1	0.544	1
RPTN	PIK3R1	0.544	1
RPTN	18p-Del	0.544	1
NF1	Del_10q21.1	0.544	1
TPRKB	ERBB2	0.544	1
RBBP7	8p-Amp	0.544	1
PTEN	8q-Amp	0.544	1
HIST1H1T	Amp_1q31.1	0.544	1
HIST1H1T	Amp_17q24.1	0.544	1
16p-Amp	8p-Amp	0.544	1
8p-Amp	Del_8q11.1	0.544	1
APC	DIP2B	0.545	1
ARID1A	17q-Amp	0.545	1
ATXN3L	Del_4q35.1	0.545	1
Amp_2q33.1	Del_4q35.1	0.545	1
Amp_5q22.3	Del_5q22.2	0.545	1
Amp_10q22.3	Amp_13q22.1	0.545	1
Del_5q22.2	Del_12p13.1	0.545	1
FAM123B	PLAGL2	0.546	1
STARD3NL	8q-Amp	0.546	1
RHOA	Del_16q23.1	0.546	1
IQCD	Del_16q23.1	0.546	1
PRRG1	BCORL1	0.546	1
BMPR2	21q-Del	0.546	1
BCORL1	Amp_10q22.3	0.546	1
Amp_6p21.1	Del_18p11.31	0.546	1
ASXL1	4q-Del	0.547	1
SETD2	6p-Amp	0.547	1
4q-Del	Amp_17q12	0.547	1
Amp_11p15.5	Del_8p22	0.547	1
ACVR1B	8p-Amp	0.548	1
PIK3R1	Amp_16p11.2	0.548	1
8p-Amp	Amp_16p11.2	0.548	1
B2M	Del_3p26.3	0.549	1
RHOA	13q-Amp	0.549	1
RPTN	Del_15q21.1	0.549	1
CHUK	RBPJ	0.549	1
CHUK	GMPS	0.549	1
MGA	Del_3q26.31	0.549	1
PRRG1	Del_5q22.2	0.549	1
12p-Amp	5q-Del	0.549	1
16p-Amp	Del_15q21.1	0.549	1
Del_8q11.1	Del_14q11.2	0.549	1
APC	C2orf29	0.55	1
APC	Del_16p13.3	0.55	1
TXNDC2	20p-Amp	0.55	1
EGR1	Del_21q11.2	0.55	1
PLEKHF2	Del_21q11.2	0.55	1
VCX2	Del_21q11.2	0.55	1
C2orf29	Del_21q11.2	0.55	1
CTNNB1	1q-Amp	0.55	1
7p-Amp	Del_3p26.3	0.55	1
TXNDC2	Amp_1q31.1	0.551	1
ACVR1B	CDK12	0.551	1
THOC7	8q-Amp	0.551	1
ERBB2	TOP2B	0.551	1
ERBB2	Del_6q26	0.551	1
GRB2	8q-Amp	0.551	1
RSPH3	8q-Amp	0.551	1
TOP2B	Amp_1q31.1	0.551	1
CDK12	Amp_16p11.2	0.551	1
Amp_1q31.1	Del_6p25.3	0.551	1
SOX9	PRKDC	0.552	1
PTCH1	Amp_8p11.21	0.552	1
PLAGL2	Amp_12p13.32	0.552	1
C2orf29	7p-Amp	0.552	1
SMAD4	Del_15q15.2	0.552	1
GMNN	14q-Del	0.552	1
GMNN	Del_21q11.2	0.552	1
Amp_12p13.32	Del_10q23.31	0.552	1
FAM123B	Amp_6p21.1	0.553	1
B2M	21q-Del	0.554	1
GGT1	Del_1p33	0.554	1
RLIM	Del_8p22	0.554	1
DDX26B	21q-Del	0.554	1
9p-Amp	Del_15q15.2	0.554	1
Del_1p36.11	Del_19p13.3	0.554	1
CRIPAK	DIP2B	0.555	1
CRIPAK	LARP4B	0.555	1
TP53	ATM	0.555	1
SOX9	PRPS1	0.555	1
ZFP36L2	Amp_5q22.3	0.555	1
CDH1	Del_12p13.1	0.555	1
SMAD2	RPTN	0.555	1
SMAD2	16p-Amp	0.555	1
EGR1	Del_10q21.1	0.555	1
RPTN	Amp_5q22.3	0.555	1
RPTN	Del_12p13.1	0.555	1
NF1	17q-Amp	0.555	1
PLEKHF2	Del_10q21.1	0.555	1
ALPK2	6p-Amp	0.555	1
ASXL1	6p-Amp	0.555	1
VCX2	Del_10q21.1	0.555	1
HLA-A	Amp_5q22.3	0.555	1
HLA-A	Del_12p13.1	0.555	1
16p-Amp	Del_12p13.1	0.555	1
17q-Amp	Del_8q11.1	0.555	1
Amp_8q12.1	Del_12p13.1	0.555	1
STARD3NL	1q-Amp	0.556	1
RB1	Del_16q23.1	0.556	1
Del_3q26.31	Del_15q22.33	0.556	1
APC	CREBBP	0.557	1
TP53	Amp_16p11.2	0.557	1
THOC7	BMPR2	0.557	1
17q-Amp	15q-Del	0.557	1
15q-Del	Del_12p13.1	0.557	1
CRIPAK	Del_15q11.2	0.558	1
BCOR	Del_15q11.2	0.558	1
RPTN	Amp_20p11.21	0.558	1
THOC7	7p-Amp	0.558	1
GRB2	7p-Amp	0.558	1
RSPH3	7p-Amp	0.558	1
ATM	Amp_8p11.21	0.558	1
Amp_8p11.23	Del_8q11.1	0.558	1
Amp_20q13.31	Del_2q22.1	0.558	1
CRIPAK	RHOA	0.559	1
CRIPAK	IQCD	0.559	1
CRIPAK	IFT57	0.559	1
MLH1	PCBP1	0.559	1
MLH1	16q-Amp	0.559	1
SELPLG	Amp_17q12	0.559	1
NF1	Amp_1q31.1	0.559	1
ALPK2	Del_16p13.3	0.559	1
ASXL1	C2orf29	0.559	1
ASXL1	L1TD1	0.559	1
RLIM	MAP4K3	0.559	1
RLIM	IDH1	0.559	1
Amp_1q31.1	Amp_8p11.21	0.559	1
Del_2p12	Del_5q22.2	0.559	1
ACVR1B	PRRG1	0.56	1
ACVR1B	Amp_10q22.3	0.56	1
CDH1	Del_16q23.1	0.56	1
ASXL1	15q-Del	0.56	1
PRRG1	Amp_16p11.2	0.56	1
BIRC3	Amp_16p11.2	0.56	1
15q-Del	Amp_17q12	0.56	1
Amp_13q22.1	Del_10q23.31	0.56	1
SELPLG	5q-Del	0.561	1
SELPLG	Amp_2q33.1	0.561	1
SELPLG	Amp_19p13.2	0.561	1
SELPLG	Del_3q26.31	0.561	1
RHOA	Del_4q35.1	0.561	1
ATXN3L	SLC26A8	0.561	1
ATXN3L	Del_16p13.3	0.561	1
C2orf29	Del_3q26.31	0.561	1
SMAD4	20p-Amp	0.561	1
FKBP9	Del_3q26.31	0.561	1
C14orf184	Del_5q21.2	0.561	1
ALDH1A3	Amp_19p13.2	0.561	1
2q-Amp	Del_17p12	0.561	1
Amp_2q33.1	Del_16p13.3	0.561	1
Amp_19p13.2	Del_16p13.3	0.561	1
ATXN3L	CTNNB1	0.562	1
ROS1	12p-Amp	0.562	1
CTNNB1	5q-Del	0.562	1
4q-Del	Amp_5q22.3	0.562	1
5q-Del	Del_3p14.2	0.562	1
Amp_6p21.1	Del_15q11.2	0.562	1
THOC7	Del_14q11.2	0.563	1
THOC7	Del_15q21.1	0.563	1
FBXW7	BCL9	0.563	1
ASXL1	LARP4B	0.563	1
ASXL1	9p-Amp	0.563	1
PTCH1	Del_5q21.2	0.563	1
DIP2B	Amp_17q12	0.563	1
DCLK2	7q-Amp	0.563	1
BCORL1	Del_5q21.2	0.563	1
MAP4K3	Amp_11p15.5	0.563	1
HIST1H1T	Del_8p22	0.563	1
IDH1	Del_1p13.2	0.563	1
Amp_20q13.31	Del_2p12	0.563	1
Del_2q22.1	Del_15q21.1	0.563	1
ROS1	RBPJ	0.564	1
PRPS1	Del_1p13.2	0.564	1
PTGDR	Del_1p13.2	0.564	1
Amp_12p13.32	Amp_20q11.21	0.564	1
TXNDC2	RBPJ	0.565	1
TXNDC2	Del_15q15.2	0.565	1
OR4D10	Del_19p13.3	0.565	1
ROS1	Del_5q22.2	0.565	1
DDX26B	Del_6p25.3	0.565	1
RBPJ	13q-Amp	0.565	1
C14orf184	7p-Amp	0.565	1
APC	TXNDC2	0.566	1
FBXW7	Amp_8p11.21	0.566	1
SMAD4	ZNF486	0.566	1
9p-Amp	Del_15q21.1	0.566	1
Amp_20q11.21	Del_12p13.1	0.566	1
PRKDC	Amp_19p13.2	0.567	1
PLEKHF2	Amp_20p11.21	0.567	1
NLRC4	7q-Amp	0.567	1
VCX2	CDK12	0.567	1
SMAD4	8p-Del	0.567	1
NEXN	Del_22q13.32	0.567	1
16p-Amp	Del_15q11.2	0.567	1
SOX9	ASXL1	0.568	1
WNT1	21q-Del	0.568	1
THOC7	Del_10q25.2	0.568	1
RSPH3	Del_10q25.2	0.568	1
SMAD4	5q-Del	0.568	1
C14orf184	22q-Del	0.568	1
PRPS1	Amp_13q12.13	0.568	1
BIRC3	Del_4q22.1	0.568	1
Amp_10q22.3	Del_4q22.1	0.568	1
FAM123B	NR1H3	0.569	1
17q-Amp	Del_4q22.1	0.569	1
Amp_5q22.3	Del_4q22.1	0.569	1
CRIPAK	17p-Del	0.57	1
KDM6A	Amp_8p11.21	0.57	1
7q-Amp	Del_14q31.1	0.57	1
9p-Amp	Amp_8q12.1	0.57	1
APC	FBXW7	0.571	1
THOC7	Del_14q31.1	0.571	1
NR1H3	SLC12A6	0.571	1
NLRC4	PCBP1	0.571	1
RSPH3	Del_14q31.1	0.571	1
RLIM	Del_1p36.11	0.571	1
DCLK2	BCORL1	0.571	1
CDK12	Del_16q23.1	0.571	1
12p-Amp	4p-Del	0.571	1
12p-Amp	Del_3p14.2	0.571	1
ZFP36L2	CHUK	0.572	1
TXNDC2	8p-Del	0.572	1
RPTN	C11orf30	0.572	1
RPTN	Del_3p26.3	0.572	1
MGA	Del_4q35.1	0.572	1
RBBP7	Del_3p26.3	0.572	1
ZNF486	9p-Amp	0.572	1
Del_3p26.3	Del_8q11.1	0.572	1
CHUK	Del_10q23.31	0.573	1
MVK	Del_16q23.1	0.573	1
ERBB2	Amp_8p11.23	0.573	1
PRPS1	12p-Amp	0.573	1
PRPS1	Del_5q12.1	0.573	1
BIRC3	Del_16q23.1	0.573	1
13q-Amp	Del_3p14.2	0.573	1
Amp_1q31.1	Amp_8p11.23	0.573	1
Amp_1q31.1	Del_14q31.1	0.573	1
Amp_10q22.3	Del_16q23.1	0.573	1
Del_5q12.1	Del_7q31.1	0.573	1
GGT1	Del_10q23.31	0.574	1
ERBB2	1q-Amp	0.574	1
DIP2B	9p-Amp	0.574	1
1q-Amp	Amp_17q24.1	0.574	1
APC	4q-Del	0.575	1
ERBB2	Del_10q23.31	0.575	1
ALG12	ROS1	0.575	1
ROS1	C14orf184	0.575	1
C14orf184	18p-Del	0.575	1
SETD2	Amp_19p13.2	0.575	1
2q-Amp	18p-Del	0.575	1
SOX9	Amp_5q22.3	0.576	1
TXNDC2	Del_14q11.2	0.576	1
TXNDC2	Del_15q21.1	0.576	1
SMAD2	RLIM	0.576	1
SMAD2	MPHOSPH10	0.576	1
MPHOSPH10	Amp_5q22.3	0.576	1
1p-Del	Del_12p13.1	0.576	1
Del_6p25.3	Del_14q11.2	0.576	1
ZFP36L2	Del_5q21.2	0.577	1
ZBTB20	12p-Amp	0.577	1
PTEN	7p-Amp	0.577	1
CDK12	4p-Del	0.577	1
CDK12	Del_3p14.2	0.577	1
IDH1	12p-Amp	0.577	1
8q-Amp	Amp_1q31.1	0.577	1
Amp_11p15.5	Amp_13q12.2	0.577	1
Del_5q21.2	Del_8q11.1	0.577	1
SOX9	SMAD4	0.578	1
MLH1	8p-Amp	0.578	1
ERBB2	Del_4p16.2	0.578	1
ASXL1	Del_4q22.1	0.578	1
GRB2	Del_15q11.2	0.578	1
FYN	Amp_12p13.32	0.578	1
SELPLG	MAP4K3	0.579	1
SELPLG	13q-Amp	0.579	1
NF2	Amp_8p11.23	0.579	1
MAPK6	IDH1	0.579	1
RHOA	PRKDC	0.579	1
FAM9A	ERBB2	0.579	1
THOC7	Amp_1q31.1	0.579	1
ZBTB20	C2orf29	0.579	1
ERBB2	GRB2	0.579	1
C2orf29	MAP4K3	0.579	1
SLC26A8	IDH1	0.579	1
FKBP9	IDH1	0.579	1
ALDH1A3	MAP4K3	0.579	1
LARP4B	Amp_8p11.23	0.579	1
GMNN	Amp_8q24.21	0.579	1
Amp_1q31.1	Del_2q22.1	0.579	1
Amp_8p11.23	Del_17q24.3	0.579	1
ATXN3L	5q-Del	0.58	1
DDX26B	1q-Amp	0.58	1
SLC12A6	Del_10q25.2	0.58	1
NEXN	5q-Del	0.58	1
CTNNB1	16q-Amp	0.58	1
5q-Del	Del_3q26.31	0.58	1
Amp_2q33.1	Amp_19p13.2	0.58	1
APC	CRIPAK	0.581	1
APC	RHOA	0.581	1
APC	IQCD	0.581	1
NF2	Amp_17q24.1	0.582	1
ERBB2	Del_4q35.1	0.582	1
CTNNB1	Del_4q22.1	0.582	1
4q-Del	Amp_8q24.21	0.582	1
Amp_17q24.1	Del_4q35.1	0.582	1
FAM123B	Del_6q26	0.583	1
ALPK2	Amp_8p11.21	0.583	1
PRPS1	8p-Del	0.583	1
PTGDR	8p-Del	0.583	1
RHOA	Del_10q21.1	0.584	1
ROS1	Del_5q21.2	0.584	1
C14orf184	Amp_20p11.21	0.584	1
HIST1H1T	4q-Del	0.584	1
ACVR1B	P2RY13	0.585	1
ACVR1B	DCLK2	0.585	1
ACVR1B	GPATCH8	0.585	1
STARD3NL	KDM6A	0.585	1
STARD3NL	Amp_16p11.2	0.585	1
SELPLG	Amp_13q12.13	0.585	1
THOC7	Amp_8q24.21	0.585	1
GRB2	Amp_8q24.21	0.585	1
PCBP1	KDM6A	0.585	1
RSPH3	Amp_8q24.21	0.585	1
DCLK2	KDM6A	0.585	1
DCLK2	Amp_16p11.2	0.585	1
HIST1H1T	Del_18q22.1	0.585	1
CRIPAK	PRRG1	0.586	1
CRIPAK	Amp_10q22.3	0.586	1
PTCH1	Del_10q23.31	0.586	1
20p-Amp	Del_16p13.3	0.586	1
Amp_17q24.1	Del_15q11.2	0.586	1
APC	SETD2	0.587	1
ZFP36L2	Del_6p25.3	0.587	1
ZFP36L2	Del_6q26	0.587	1
ZFP36L2	Del_19p13.3	0.587	1
TXNDC2	RBBP7	0.587	1
TXNDC2	16p-Amp	0.587	1
RPTN	TOP2B	0.587	1
ASXL1	Del_10q21.1	0.587	1
MPHOSPH10	Amp_8p11.21	0.587	1
RBBP7	Del_6p25.3	0.587	1
RBBP7	Del_6q26	0.587	1
TOP2B	16p-Amp	0.587	1
GMNN	Del_8p23.2	0.587	1
16p-Amp	Del_6q26	0.587	1
Amp_8p11.23	Del_6p25.3	0.587	1
Amp_8p11.23	Del_6q26	0.587	1
Amp_17q12	Del_10q21.1	0.587	1
Del_6p25.3	Del_8q11.1	0.587	1
ZFP36L2	21q-Del	0.588	1
STARD3NL	Del_5q22.2	0.588	1
ATXN3L	ASXL1	0.588	1
ASXL1	Del_3q26.31	0.588	1
RBBP7	22q-Del	0.588	1
HLA-A	22q-Del	0.588	1
GPATCH8	Del_5q22.2	0.588	1
NEXN	14q-Del	0.588	1
NEXN	Amp_17q12	0.588	1
8q-Amp	Del_6q26	0.588	1
14q-Del	Amp_19p13.2	0.588	1
ERBB2	7p-Amp	0.589	1
PTCH1	Del_7q31.1	0.589	1
GRB2	Del_1p33	0.589	1
VCX2	BMPR2	0.589	1
SMAD4	15q-Del	0.589	1
GMNN	Del_15q15.2	0.589	1
CTNNB1	8q-Amp	0.589	1
17p-Del	Amp_17q24.1	0.589	1
Del_1p33	Del_2q22.1	0.589	1
RLIM	Del_14q11.2	0.59	1
MAP4K3	Del_3p14.2	0.59	1
SETD2	12p-Amp	0.59	1
IDH1	Del_3p14.2	0.59	1
TXNDC2	Amp_20q11.21	0.591	1
MLH1	Amp_11p15.5	0.591	1
RB1	BIRC3	0.591	1
PTEN	Amp_8q24.21	0.591	1
2p-Amp	Del_8p23.2	0.591	1
6p-Amp	Del_8p23.2	0.591	1
RB1	Del_6p25.3	0.592	1
20p-Amp	Del_22q13.32	0.592	1
9p-Amp	Del_10q21.1	0.592	1
Amp_8q24.21	Del_22q13.32	0.592	1
ARID1A	GRB2	0.593	1
SOX9	GGT1	0.593	1
SOX9	TPRKB	0.593	1
SOX9	HIST1H1T	0.593	1
TXNDC2	Amp_13q12.13	0.593	1
TXNDC2	Del_8p22	0.593	1
IQCD	PTEN	0.593	1
HIST1H1T	7q-Amp	0.593	1
7q-Amp	21q-Del	0.593	1
APC	1p-Del	0.594	1
TP53	ROS1	0.594	1
SELPLG	20q-Amp	0.594	1
ERBB2	22q-Del	0.594	1
ALPK2	Amp_8q12.1	0.594	1
ASXL1	Amp_8q12.1	0.594	1
GMNN	Del_14q11.2	0.594	1
GMNN	Del_15q21.1	0.594	1
22q-Del	Amp_1q31.1	0.594	1
22q-Del	Amp_17q24.1	0.594	1
MLH1	GMPS	0.595	1
PRKDC	8q-Amp	0.595	1
BCL9	RBPJ	0.595	1
SMAD4	Del_10q21.1	0.595	1
Amp_8p11.23	Del_14q31.1	0.595	1
Del_1p33	Del_10q23.31	0.595	1
TP53	20p-Del	0.596	1
MLH1	2q-Amp	0.596	1
SMAD2	C2orf29	0.596	1
SELPLG	Amp_5q22.3	0.596	1
SELPLG	Del_12p13.1	0.596	1
NF2	4p-Del	0.596	1
MAPK6	Amp_5q22.3	0.596	1
THOC7	Amp_8q12.1	0.596	1
IQCD	CDK12	0.596	1
GRB2	Amp_8q12.1	0.596	1
NLRC4	Amp_1q31.1	0.596	1
IFT57	20p-Del	0.596	1
IFT57	Del_21q11.2	0.596	1
SLC26A8	17q-Amp	0.596	1
TOP2B	Amp_12p13.32	0.596	1
ALDH1A3	Amp_5q22.3	0.596	1
HIST1H1T	Del_17p12	0.596	1
Amp_5q22.3	Del_16p13.3	0.596	1
Amp_8q12.1	Del_2q22.1	0.596	1
TOP2B	Del_10q23.31	0.597	1
C14orf184	Amp_13q12.2	0.597	1
TXNDC2	Del_15q11.2	0.598	1
FMN2	DCLK2	0.598	1
FMN2	FYN	0.598	1
STARD3NL	Amp_8q12.1	0.598	1
EGR1	Del_1p36.11	0.598	1
FBXW7	PCBP1	0.598	1
FBXW7	16q-Amp	0.598	1
ATXN3L	IDH1	0.598	1
PLEKHF2	Del_1p36.11	0.598	1
PIK3R1	Del_22q13.32	0.598	1
MAP4K3	Amp_2q33.1	0.598	1
MAP4K3	Del_3q26.31	0.598	1
Del_6p25.3	Del_15q11.2	0.598	1
SMAD2	ATM	0.599	1
SMAD2	20p-Amp	0.599	1
MVK	9p-Amp	0.599	1
ASXL1	PRPS1	0.599	1
ASXL1	Del_7q31.1	0.599	1
PRRG1	9p-Amp	0.599	1
LARP4B	Amp_10q22.3	0.599	1
GPATCH8	Del_16q23.1	0.599	1
PRPS1	Amp_17q12	0.599	1
BIRC3	Del_17q24.3	0.599	1
ATM	Amp_5q22.3	0.599	1
ATM	Del_12p13.1	0.599	1
GMNN	Amp_8p11.23	0.599	1
GMNN	Del_14q31.1	0.599	1
20p-Amp	Del_12p13.1	0.599	1
Amp_10q22.3	Del_17q24.3	0.599	1
Amp_17q12	Del_7q31.1	0.599	1
SOX9	Amp_12p13.32	0.6	1
CDH1	RSPH3	0.6	1
RLIM	Amp_8p11.23	0.6	1
RLIM	Del_14q31.1	0.6	1
MPHOSPH10	Amp_8p11.23	0.6	1
13q-Amp	Del_10q23.31	0.6	1
1q-Amp	Del_15q15.2	0.6	1
SOX9	CHUK	0.601	1
FBXW7	Del_16p13.3	0.601	1
CHUK	Del_4q22.1	0.601	1
C2orf29	Amp_8q12.1	0.601	1
PTEN	Del_6p25.3	0.601	1
HIST1H1T	Del_18q21.2	0.601	1
FAM123B	C14orf184	0.602	1
C14orf184	Amp_13q22.1	0.602	1
KDM6A	Del_10q25.2	0.602	1
17p-Del	Del_2p12	0.602	1
ZFP36L2	1q-Amp	0.603	1
GGT1	Del_1p13.2	0.603	1
PRRG1	Del_8p23.2	0.603	1
PCBP1	Amp_20p11.21	0.603	1
RBBP7	1q-Amp	0.603	1
DCLK2	Amp_20p11.21	0.603	1
HIST1H1T	Amp_11p15.5	0.603	1
GMNN	13q-Amp	0.603	1
CTNNB1	Amp_8p11.21	0.603	1
1q-Amp	Del_8q11.1	0.603	1
Amp_5q22.3	Del_5q12.1	0.603	1
ACVR1B	21q-Del	0.604	1
NF2	BIRC3	0.604	1
NF2	Amp_10q22.3	0.604	1
SMAD4	Del_8p23.2	0.604	1
PTEN	7q-Amp	0.604	1
IDH1	CTNNB1	0.604	1
18p-Del	Amp_6p21.1	0.604	1
FAM123B	CDH1	0.605	1
FBXW7	Del_3p26.3	0.605	1
SETD2	8p-Del	0.605	1
APC	C11orf30	0.606	1
FMN2	Amp_8p11.23	0.606	1
OR4D10	Del_8p22	0.606	1
STARD3NL	Del_4q22.1	0.607	1
SLC26A8	8p-Amp	0.607	1
GMNN	20p-Amp	0.607	1
8p-Amp	Del_16p13.3	0.607	1
CRIPAK	Del_15q22.33	0.608	1
Del_5q22.2	Del_6p25.3	0.608	1
TXNDC2	RLIM	0.609	1
OR4D10	Amp_16p11.2	0.609	1
NF1	Del_16q23.1	0.609	1
ALPK2	21q-Del	0.609	1
ASXL1	22q-Del	0.609	1
ALG12	Amp_12p13.32	0.609	1
RLIM	Del_19p13.3	0.609	1
MPHOSPH10	Del_6p25.3	0.609	1
RBPJ	Amp_16p11.2	0.609	1
RB1	7p-Amp	0.609	1
SETD2	Del_3p14.2	0.609	1
9p-Amp	8p-Del	0.609	1
22q-Del	Amp_17q12	0.609	1
MLH1	Amp_8q12.1	0.61	1
THOC7	Del_10q23.31	0.61	1
ALPK2	20p-Del	0.61	1
6p-Amp	Del_4p16.2	0.61	1
SOX9	ERBB2	0.611	1
OR4D10	7p-Amp	0.611	1
EGR1	ERBB2	0.611	1
ERBB2	Del_22q13.32	0.611	1
ST3GAL6	Amp_1q31.1	0.611	1
1q-Amp	Del_14q11.2	0.611	1
1q-Amp	Del_15q21.1	0.611	1
Amp_17q24.1	Del_22q13.32	0.611	1
ARID1A	Amp_12p13.32	0.612	1
CRIPAK	P2RY13	0.612	1
CRIPAK	PCBP1	0.612	1
CRIPAK	DCLK2	0.612	1
BCOR	P2RY13	0.612	1
BCOR	DCLK2	0.612	1
BCOR	GPATCH8	0.612	1
BCOR	16q-Amp	0.612	1
GGT1	Del_5q12.1	0.612	1
TPRKB	12p-Amp	0.612	1
CDK12	15q-Del	0.612	1
CREBBP	Amp_10q22.3	0.612	1
Amp_10q22.3	Del_10q21.1	0.612	1
ARID1A	Amp_17q24.1	0.613	1
TP53	BCORL1	0.613	1
FAM123B	1q-Amp	0.613	1
SELPLG	CHUK	0.613	1
NF1	13q-Amp	0.613	1
CHUK	Del_16p13.3	0.613	1
C11orf30	C2orf29	0.613	1
C2orf29	Amp_6p21.1	0.613	1
ALDH1A3	Amp_6p21.1	0.613	1
FMN2	Amp_8q12.1	0.614	1
ATXN3L	Del_8p23.2	0.614	1
PIK3R1	Amp_12p13.32	0.614	1
NEXN	Del_8p23.2	0.614	1
17q-Amp	Del_4q35.1	0.614	1
Amp_5q22.3	Del_4q35.1	0.614	1
Amp_20q12	Del_12p13.1	0.614	1
RNF43	Amp_8p11.21	0.615	1
OR4D10	Amp_12p13.32	0.615	1
ALG12	Del_5q22.2	0.615	1
DDX26B	Amp_12p13.32	0.615	1
RBPJ	Amp_12p13.32	0.615	1
C14orf184	Del_5q22.2	0.615	1
18q-Del	Amp_12p13.32	0.615	1
APC	Del_3p14.2	0.616	1
SMAD2	Amp_2q33.1	0.616	1
SMAD2	Amp_19p13.2	0.616	1
ATXN3L	Amp_5q22.3	0.616	1
ATXN3L	Del_12p13.1	0.616	1
ZBTB20	IDH1	0.616	1
ASXL1	IDH1	0.616	1
NEXN	Del_12p13.1	0.616	1
5q-Del	Amp_5q22.3	0.616	1
Amp_5q22.3	Del_3q26.31	0.616	1
Del_5q21.2	Del_16q23.1	0.616	1
PLEKHF2	8q-Amp	0.617	1
SMAD4	Amp_20p11.21	0.617	1
17q-Amp	Del_3p14.2	0.617	1
6p-Amp	22q-Del	0.617	1
4p-Del	Del_12p13.1	0.617	1
Amp_8q12.1	Del_10q25.2	0.617	1
ZFP36L2	BCL9	0.618	1
ACVR1B	ERBB2	0.618	1
ACVR1B	Amp_1q31.1	0.618	1
ACVR1B	Amp_17q24.1	0.618	1
RPTN	BCORL1	0.618	1
ATXN3L	8p-Del	0.618	1
ERBB2	KDM6A	0.618	1
PIK3R1	4q-Del	0.618	1
PTEN	Amp_16p11.2	0.618	1
BCORL1	16p-Amp	0.618	1
NEXN	8p-Del	0.618	1
KDM6A	Amp_1q31.1	0.618	1
7q-Amp	Del_3p14.2	0.618	1
8p-Del	Amp_2q33.1	0.618	1
PLAGL2	Del_21q11.2	0.619	1
PIK3R1	17p-Del	0.619	1
ROS1	7q-Amp	0.619	1
TXNDC2	15q-Del	0.62	1
BCOR	Del_22q13.32	0.62	1
FMN2	Del_19p13.3	0.62	1
THOC7	13q-Amp	0.62	1
C2orf29	Del_15q15.2	0.62	1
HIST1H1T	4p-Del	0.62	1
HIST1H1T	Del_3p14.2	0.62	1
NF2	Amp_12p13.32	0.621	1
EGR1	Amp_8p11.23	0.621	1
ATXN3L	Amp_13q22.1	0.621	1
PLEKHF2	Amp_8p11.23	0.621	1
RLIM	22q-Del	0.621	1
BIRC3	Del_22q13.32	0.621	1
FMN2	2q-Amp	0.622	1
GGT1	Amp_20p11.21	0.622	1
PLEKHF2	Del_1p33	0.622	1
VCX2	Del_1p33	0.622	1
17p-Del	Amp_12p13.32	0.622	1
OR4D10	Del_16q23.1	0.623	1
1q-Amp	Del_18q21.2	0.623	1
18q-Del	Del_7q31.1	0.623	1
PRKDC	Amp_8p11.23	0.624	1
PRRG1	CDK12	0.624	1
ROS1	6p-Amp	0.624	1
C14orf184	Amp_13q12.13	0.624	1
CTNNB1	22q-Del	0.624	1
9p-Amp	Del_4q35.1	0.624	1
17p-Del	Amp_2q33.1	0.624	1
SOX9	TOP2B	0.625	1
CDH1	Amp_11p15.5	0.625	1
SMAD2	7q-Amp	0.625	1
STARD3NL	Del_17q24.3	0.625	1
FAM9A	20p-Amp	0.625	1
NF1	Del_7q31.1	0.625	1
NR1H3	DIP2B	0.625	1
NR1H3	LARP4B	0.625	1
NR1H3	9p-Amp	0.625	1
NR1H3	Del_17q24.3	0.625	1
DIP2B	PCBP1	0.625	1
DIP2B	GPATCH8	0.625	1
DIP2B	16q-Amp	0.625	1
PCBP1	Del_17q24.3	0.625	1
LARP4B	16q-Amp	0.625	1
PRPS1	Amp_8p11.21	0.625	1
PTGDR	Amp_8p11.21	0.625	1
CREBBP	Del_12p13.1	0.625	1
CTNNB1	Amp_16p11.2	0.625	1
16q-Amp	9p-Amp	0.625	1
20p-Amp	Del_2q22.1	0.625	1
7q-Amp	Del_1p36.11	0.625	1
Del_12p13.1	Del_15q22.33	0.625	1
RNF43	12p-Amp	0.626	1
GMNN	Del_8p22	0.626	1
FAM123B	Amp_12p13.32	0.627	1
CDH1	22q-Del	0.627	1
PTCH1	NEXN	0.627	1
PTCH1	Amp_2q33.1	0.627	1
PTCH1	Amp_19p13.2	0.627	1
PTCH1	Del_3q26.31	0.627	1
16q-Amp	8p-Del	0.627	1
NF1	Amp_10q22.3	0.628	1
ALPK2	4p-Del	0.628	1
PRRG1	Amp_8p11.21	0.628	1
13q-Amp	Amp_10q22.3	0.628	1
SOX9	THOC7	0.629	1
TXNDC2	C2orf29	0.629	1
TXNDC2	L1TD1	0.629	1
TXNDC2	ALDH1A3	0.629	1
TXNDC2	Del_16p13.3	0.629	1
SELPLG	Del_6p25.3	0.629	1
SELPLG	Del_15q21.1	0.629	1
ASXL1	Del_1p36.11	0.629	1
C2orf29	TOP2B	0.629	1
C2orf29	Del_6p25.3	0.629	1
C2orf29	Del_6q26	0.629	1
C2orf29	Del_15q21.1	0.629	1
C2orf29	Del_19p13.3	0.629	1
SLC26A8	Del_6p25.3	0.629	1
L1TD1	Del_6q26	0.629	1
PTEN	GMNN	0.629	1
ALDH1A3	Del_6p25.3	0.629	1
ALDH1A3	Del_6q26	0.629	1
CDH1	Del_19p13.3	0.63	1
MLH1	16p-Amp	0.63	1
MLH1	Del_8q11.1	0.63	1
ATXN3L	Amp_20q13.31	0.63	1
TXNDC2	Del_4q22.1	0.631	1
PRPS1	8p-Amp	0.631	1
RPTN	Amp_16p11.2	0.632	1
CHUK	ATXN3L	0.632	1
CHUK	Del_3q26.31	0.632	1
PIK3R1	Del_5q22.2	0.632	1
RBBP7	Amp_16p11.2	0.632	1
RB1	1q-Amp	0.632	1
NEXN	Amp_6p21.1	0.632	1
CREBBP	Del_4q35.1	0.632	1
5q-Del	Amp_6p21.1	0.632	1
5q-Del	Del_3p26.3	0.632	1
Amp_2q33.1	Del_3p26.3	0.632	1
Amp_16p11.2	Del_8q11.1	0.632	1
ROS1	Del_1p33	0.633	1
RB1	Amp_8q12.1	0.633	1
FMN2	RBPJ	0.634	1
C2orf29	Amp_8p11.21	0.634	1
ALDH1A3	Amp_8p11.21	0.634	1
MAP4K3	Del_12p13.1	0.634	1
SETD2	Del_15q21.1	0.634	1
IDH1	17q-Amp	0.634	1
12p-Amp	Del_21q11.2	0.634	1
1q-Amp	4q-Del	0.634	1
20p-Amp	Amp_10q22.3	0.634	1
Amp_8p11.21	Del_16p13.3	0.634	1
ARID1A	Del_5q22.2	0.635	1
CDH1	Del_15q15.2	0.635	1
PRKDC	17q-Amp	0.635	1
RB1	Amp_19p13.2	0.635	1
ARID1A	Del_14q11.2	0.636	1
CRIPAK	DDX26B	0.636	1
CRIPAK	GMPS	0.636	1
BCOR	OR4D10	0.636	1
BCOR	RBPJ	0.636	1
PIK3R1	Amp_2q33.1	0.636	1
SMAD4	Amp_8q24.21	0.636	1
8p-Amp	Del_3q26.31	0.636	1
PCBP1	Del_10q21.1	0.637	1
ROS1	Amp_8q12.1	0.637	1
DCLK2	Del_10q21.1	0.637	1
FYN	Del_10q21.1	0.637	1
GGT1	ALPK2	0.638	1
FAM9A	Amp_11p15.5	0.638	1
MVK	Del_21q11.2	0.638	1
GRB2	Del_1p13.2	0.638	1
BIRC3	Del_21q11.2	0.638	1
HIST1H1T	Amp_13q12.2	0.638	1
Amp_11p15.5	Del_2q22.1	0.638	1
Amp_17q24.1	Del_16q23.1	0.638	1
APC	RPTN	0.639	1
APC	16p-Amp	0.639	1
ARID1A	12p-Amp	0.639	1
SELPLG	Amp_8p11.23	0.639	1
MAPK6	Amp_8p11.23	0.639	1
C2orf29	Amp_8p11.23	0.639	1
6p-Amp	Del_8p22	0.639	1
Amp_11p15.5	Del_6p25.3	0.639	1
Del_1p13.2	Del_19p13.3	0.639	1
FAM123B	ZFP36L2	0.64	1
FAM123B	Del_8q11.1	0.64	1
TXNDC2	Amp_8p11.21	0.64	1
MLH1	Del_4p16.2	0.64	1
8p-Del	Amp_1q31.1	0.64	1
CRIPAK	Del_4p16.2	0.641	1
TXNDC2	Amp_20q12	0.641	1
SELPLG	Del_4p16.2	0.641	1
RHOA	Amp_1q31.1	0.641	1
ERBB2	IFT57	0.641	1
IQCD	Amp_17q24.1	0.641	1
ZNF486	Amp_1q31.1	0.641	1
SMAD2	ASXL1	0.642	1
SMAD2	Amp_17q12	0.642	1
NF2	Del_5q22.2	0.642	1
EGR1	Del_10q23.31	0.642	1
CHUK	Del_3p14.2	0.642	1
PLEKHF2	Del_10q23.31	0.642	1
ALPK2	Amp_5q22.3	0.642	1
ALPK2	Del_12p13.1	0.642	1
NLRC4	Del_10q23.31	0.642	1
ZFP36L2	20p-Amp	0.643	1
NF2	PCBP1	0.643	1
NF2	16q-Amp	0.643	1
NR1H3	Del_4q35.1	0.643	1
MAP4K3	8q-Amp	0.643	1
IDH1	8q-Amp	0.643	1
GGT1	8p-Del	0.644	1
SELPLG	1q-Amp	0.644	1
TPRKB	8p-Del	0.644	1
C2orf29	1q-Amp	0.644	1
FKBP9	1q-Amp	0.644	1
PTEN	2p-Amp	0.644	1
PTEN	6p-Amp	0.644	1
NEXN	13q-Amp	0.644	1
HIST1H1T	8p-Del	0.644	1
GMNN	20q-Amp	0.644	1
CTNNB1	17q-Amp	0.644	1
CTNNB1	Amp_5q22.3	0.644	1
APC	17q-Amp	0.645	1
FAM123B	Del_10q25.2	0.645	1
MLH1	2p-Amp	0.645	1
MLH1	6p-Amp	0.645	1
MGA	ERBB2	0.645	1
MGA	Amp_1q31.1	0.645	1
SMAD4	1q-Amp	0.645	1
HIST1H1T	17p-Del	0.645	1
Amp_1q31.1	Del_5q12.1	0.645	1
ZFP36L2	Del_16q23.1	0.646	1
SMAD2	PTEN	0.646	1
RPTN	Del_16q23.1	0.646	1
NF1	Amp_13q12.2	0.646	1
PTEN	Amp_5q22.3	0.646	1
PTEN	Del_12p13.1	0.646	1
HLA-A	Del_16q23.1	0.646	1
Amp_12p13.32	Del_5q12.1	0.646	1
THOC7	MGA	0.647	1
THOC7	Del_5q12.1	0.647	1
RSPH3	Del_5q12.1	0.647	1
8p-Amp	Del_10q21.1	0.647	1
Del_1p36.11	Del_3q26.31	0.647	1
SOX9	1q-Amp	0.648	1
ZFP36L2	17p-Del	0.648	1
TXNDC2	ATXN3L	0.648	1
TXNDC2	Amp_19p13.2	0.648	1
RPTN	17p-Del	0.648	1
THOC7	7q-Amp	0.648	1
ATXN3L	Del_6q26	0.648	1
RSPH3	7q-Amp	0.648	1
C2orf29	Del_15q11.2	0.648	1
TOP2B	5q-Del	0.648	1
TOP2B	Amp_2q33.1	0.648	1
TOP2B	Del_3q26.31	0.648	1
NEXN	Del_19p13.3	0.648	1
5q-Del	Del_6p25.3	0.648	1
5q-Del	Del_6q26	0.648	1
Amp_2q33.1	Del_6q26	0.648	1
Amp_2q33.1	Del_19p13.3	0.648	1
Amp_19p13.2	Del_6p25.3	0.648	1
Del_3q26.31	Del_6q26	0.648	1
Del_15q11.2	Del_16p13.3	0.648	1
ZFP36L2	Amp_12p13.32	0.649	1
RHOA	ATM	0.649	1
DDX26B	9p-Amp	0.649	1
HLA-A	Amp_12p13.32	0.649	1
8p-Amp	15q-Del	0.649	1
PCBP1	CDK12	0.65	1
SMAD2	17q-Amp	0.651	1
SMAD2	Amp_5q22.3	0.651	1
SELPLG	21q-Del	0.651	1
SELPLG	22q-Del	0.651	1
CHUK	MAP4K3	0.651	1
C2orf29	21q-Del	0.651	1
L1TD1	21q-Del	0.651	1
IDH1	Del_3p26.3	0.651	1
GMNN	7q-Amp	0.651	1
20p-Amp	Amp_19p13.2	0.651	1
8q-Amp	Del_21q11.2	0.651	1
APC	Amp_16p11.2	0.652	1
FAM123B	6p-Amp	0.652	1
TXNDC2	12p-Amp	0.652	1
TXNDC2	Amp_8q12.1	0.652	1
FBXW7	Amp_2q33.1	0.652	1
ERBB2	Del_8p22	0.652	1
PLEKHF2	4q-Del	0.652	1
VCX2	4q-Del	0.652	1
FYN	Del_15q22.33	0.652	1
NEXN	Amp_8q12.1	0.652	1
12p-Amp	Del_19p13.3	0.652	1
Amp_8q12.1	Del_6p25.3	0.652	1
Amp_8q12.1	Del_6q26	0.652	1
CDH1	12p-Amp	0.653	1
CDH1	Del_5q12.1	0.653	1
BCL9	Amp_12p13.32	0.653	1
RLIM	Amp_13q12.2	0.653	1
RLIM	Amp_16p11.2	0.653	1
MPHOSPH10	Amp_16p11.2	0.653	1
C14orf184	Del_4q35.1	0.653	1
SLC12A6	Amp_12p13.32	0.653	1
CDK12	Del_15q11.2	0.653	1
ATM	Del_3p26.3	0.653	1
2q-Amp	Del_4q35.1	0.653	1
RNF43	SMAD2	0.654	1
ACVR1B	Del_1p36.11	0.654	1
CDH1	Del_1p33	0.654	1
SMAD4	8p-Amp	0.654	1
SETD2	Amp_6p21.1	0.654	1
PRPS1	Del_5q21.2	0.654	1
PTGDR	Del_4p16.2	0.654	1
CRIPAK	21q-Del	0.655	1
CRIPAK	22q-Del	0.655	1
CDH1	Del_15q21.1	0.655	1
MLH1	Amp_16p11.2	0.655	1
BCOR	21q-Del	0.655	1
BCOR	22q-Del	0.655	1
SLC12A6	Amp_8p11.23	0.655	1
GMPS	Amp_8q12.1	0.655	1
12p-Amp	Del_18q12.2	0.655	1
ZFP36L2	8q-Amp	0.656	1
GGT1	RB1	0.656	1
FBXW7	ERBB2	0.656	1
GRB2	Del_3p14.2	0.656	1
BCORL1	4q-Del	0.656	1
SLC12A6	4q-Del	0.656	1
GMNN	Amp_20q11.21	0.656	1
17q-Amp	Del_21q11.2	0.656	1
8q-Amp	Del_8q11.1	0.656	1
Amp_1q31.1	Amp_8q12.1	0.656	1
Amp_1q31.1	Del_18q21.2	0.656	1
Amp_5q22.3	Del_21q11.2	0.656	1
Del_2q22.1	Del_3p14.2	0.656	1
Amp_19p13.2	Del_15q15.2	0.657	1
Del_3q26.31	Del_15q15.2	0.657	1
CRIPAK	ERBB2	0.658	1
CDH1	Del_10q21.1	0.658	1
PTEN	Del_2q22.1	0.658	1
SETD2	Del_10q25.2	0.658	1
BIRC3	Del_10q25.2	0.658	1
APC	CDK12	0.659	1
CRIPAK	RPTN	0.659	1
CRIPAK	RBBP7	0.659	1
BCOR	RPTN	0.659	1
BCOR	HLA-A	0.659	1
BCOR	16p-Amp	0.659	1
BCOR	Del_8q11.1	0.659	1
SELPLG	BCL9	0.659	1
RHOA	Del_15q21.1	0.659	1
BCL9	C2orf29	0.659	1
ASXL1	Del_15q22.33	0.659	1
NLRC4	Del_16p13.3	0.659	1
C2orf29	BCORL1	0.659	1
C2orf29	SLC12A6	0.659	1
ZNF486	Del_14q11.2	0.659	1
16p-Amp	Del_5q22.2	0.659	1
Del_5q22.2	Del_8q11.1	0.659	1
MLH1	22q-Del	0.66	1
MLH1	Amp_8p11.21	0.66	1
EGR1	FBXW7	0.66	1
NR1H3	Del_22q13.32	0.66	1
PCBP1	Amp_13q12.13	0.66	1
RLIM	Amp_8q24.21	0.66	1
RLIM	Amp_13q22.1	0.66	1
CREBBP	Del_5q22.2	0.66	1
16q-Amp	Del_22q13.32	0.66	1
1q-Amp	Del_4q22.1	0.66	1
Amp_8q24.21	Del_6q26	0.66	1
Del_16q23.1	Del_18q22.1	0.66	1
SOX9	EGR1	0.661	1
SOX9	ST3GAL6	0.661	1
SOX9	PLEKHF2	0.661	1
THOC7	CTNNB1	0.661	1
DIP2B	Del_10q25.2	0.661	1
RSPH3	CTNNB1	0.661	1
LARP4B	Del_10q25.2	0.661	1
PRPS1	21q-Del	0.661	1
PTGDR	22q-Del	0.661	1
KDM6A	Amp_8q24.21	0.661	1
9p-Amp	Del_10q25.2	0.661	1
22q-Del	Del_7q31.1	0.661	1
Amp_8p11.21	Del_10q23.31	0.661	1
Del_2p12	Del_14q11.2	0.661	1
B2M	Del_10q21.1	0.662	1
WNT1	SMAD4	0.662	1
ERBB2	4p-Del	0.662	1
DDX26B	Del_10q21.1	0.662	1
RBPJ	Del_10q21.1	0.662	1
SMAD4	C14orf184	0.662	1
4p-Del	Amp_17q24.1	0.662	1
Amp_1q31.1	Del_3p14.2	0.662	1
Del_7q31.1	Del_18q12.2	0.662	1
MAP4K3	8p-Amp	0.663	1
14q-Del	Amp_8q24.21	0.663	1
Amp_16p11.2	Del_10q23.31	0.663	1
PRKDC	2q-Amp	0.664	1
C14orf184	Del_22q13.32	0.664	1
1q-Amp	Del_3q26.31	0.664	1
7p-Amp	Del_8q11.1	0.664	1
TXNDC2	4p-Del	0.665	1
EGR1	Amp_8q24.21	0.665	1
THOC7	SETD2	0.665	1
ST3GAL6	Amp_8q24.21	0.665	1
PLEKHF2	Amp_8q24.21	0.665	1
DIP2B	Del_4p16.2	0.665	1
DIP2B	Del_5q21.2	0.665	1
PRRG1	Del_8p22	0.665	1
RSPH3	SETD2	0.665	1
RB1	Del_10q21.1	0.665	1
4p-Del	Del_6p25.3	0.665	1
TXNDC2	18p-Del	0.666	1
RHOA	Amp_8p11.23	0.666	1
IQCD	Amp_8p11.23	0.666	1
PIK3R1	Del_4q22.1	0.666	1
Amp_19p13.2	Del_15q21.1	0.666	1
Del_3q26.31	Del_15q21.1	0.666	1
TXNDC2	IDH1	0.667	1
PRKDC	Amp_6p21.1	0.667	1
ZBTB20	Del_6p25.3	0.667	1
MPHOSPH10	Del_16q23.1	0.667	1
MAP4K3	Del_19p13.3	0.667	1
7p-Amp	Del_21q11.2	0.667	1
Amp_8p11.21	Del_4q22.1	0.667	1
Amp_12p13.32	Del_3p14.2	0.667	1
RPTN	15q-Del	0.668	1
CHUK	Amp_5q22.3	0.668	1
PTCH1	MAP4K3	0.668	1
PTCH1	IDH1	0.668	1
C11orf30	17q-Amp	0.668	1
HIST1H1T	Amp_13q12.13	0.668	1
17q-Amp	Del_3p26.3	0.668	1
Amp_5q22.3	Amp_6p21.1	0.668	1
ATXN3L	Del_4p16.2	0.669	1
ATXN3L	Del_5q21.2	0.669	1
MVK	ERBB2	0.669	1
MVK	Amp_1q31.1	0.669	1
PRRG1	Amp_17q24.1	0.669	1
NEXN	Del_5q21.2	0.669	1
BIRC3	Amp_1q31.1	0.669	1
BIRC3	Amp_17q24.1	0.669	1
CREBBP	22q-Del	0.669	1
Amp_10q22.3	Amp_17q24.1	0.669	1
Del_3q26.31	Del_5q21.2	0.669	1
GGT1	PIK3R1	0.67	1
RHOA	Amp_13q12.2	0.67	1
TPRKB	PIK3R1	0.67	1
PLEKHF2	Del_1p13.2	0.67	1
PIK3R1	HIST1H1T	0.67	1
PIK3R1	Del_5q21.2	0.67	1
VCX2	Amp_11p15.5	0.67	1
SMAD4	Del_15q22.33	0.67	1
HIST1H1T	8p-Amp	0.67	1
FMN2	2p-Amp	0.671	1
PTEN	Amp_10q22.3	0.671	1
C14orf184	18q-Del	0.671	1
CRIPAK	7q-Amp	0.672	1
FAM123B	1p-Del	0.672	1
ZFP36L2	DIP2B	0.672	1
ZFP36L2	Del_17q24.3	0.672	1
RHOA	Del_10q23.31	0.672	1
RPTN	DIP2B	0.672	1
RPTN	9p-Amp	0.672	1
RPTN	Del_17q24.3	0.672	1
PTCH1	Del_4q35.1	0.672	1
DIP2B	16p-Amp	0.672	1
IFT57	Del_10q23.31	0.672	1
HLA-A	Del_17q24.3	0.672	1
LARP4B	16p-Amp	0.672	1
ZNF486	Del_10q23.31	0.672	1
16p-Amp	9p-Amp	0.672	1
9p-Amp	Del_8q11.1	0.672	1
THOC7	ALPK2	0.673	1
THOC7	ASXL1	0.673	1
NR1H3	BMPR2	0.673	1
ASXL1	GRB2	0.673	1
ASXL1	Del_2q22.1	0.673	1
PCBP1	BMPR2	0.673	1
PTGDR	Amp_8q24.21	0.673	1
9p-Amp	14q-Del	0.673	1
Amp_17q12	Del_14q31.1	0.673	1
ACVR1B	SELPLG	0.674	1
ACVR1B	C2orf29	0.674	1
CDH1	L1TD1	0.674	1
CDH1	Del_16p13.3	0.674	1
SELPLG	KDM6A	0.674	1
FBXW7	6p-Amp	0.674	1
RBPJ	CDK12	0.674	1
RBPJ	20p-Del	0.674	1
ALDH1A3	KDM6A	0.674	1
KDM6A	Del_16p13.3	0.674	1
Amp_8p11.21	Del_15q22.33	0.674	1
NEXN	Del_14q31.1	0.675	1
ZNF486	8q-Amp	0.675	1
Amp_8p11.23	Del_3q26.31	0.675	1
ARID1A	20p-Del	0.676	1
TXNDC2	Del_8p23.2	0.676	1
CDH1	Amp_8p11.23	0.676	1
WNT1	Del_21q11.2	0.676	1
FMN2	12p-Amp	0.676	1
NF2	Del_19p13.3	0.676	1
RHOA	Amp_13q22.1	0.676	1
VCX2	Del_8p23.2	0.676	1
BCORL1	15q-Del	0.676	1
2q-Amp	14q-Del	0.676	1
ZFP36L2	Del_4q22.1	0.677	1
MLH1	Del_1p33	0.677	1
RPTN	Del_4q22.1	0.677	1
NF1	Amp_2q33.1	0.677	1
NF1	Del_3q26.31	0.677	1
FBXW7	7p-Amp	0.677	1
ATXN3L	Amp_8p11.21	0.677	1
ERBB2	Del_17q24.3	0.677	1
GRB2	SMAD4	0.677	1
DIP2B	Amp_17q24.1	0.677	1
FYN	Del_21q11.2	0.677	1
LARP4B	Amp_1q31.1	0.677	1
GMNN	Amp_13q12.2	0.677	1
16q-Amp	Del_21q11.2	0.677	1
17p-Del	Amp_10q22.3	0.677	1
Amp_17q24.1	Del_17q24.3	0.677	1
CDH1	Del_3p14.2	0.678	1
NF2	20p-Del	0.678	1
NF1	PCBP1	0.678	1
BCL9	5q-Del	0.678	1
BCL9	Del_3q26.31	0.678	1
P2RY13	Amp_8p11.21	0.678	1
NLRC4	Del_3q26.31	0.678	1
PIK3R1	Del_5q12.1	0.678	1
DCLK2	Amp_8p11.21	0.678	1
GPATCH8	Amp_8p11.21	0.678	1
SETD2	Del_6p25.3	0.678	1
SLC12A6	Amp_19p13.2	0.678	1
SLC12A6	Del_3q26.31	0.678	1
GMNN	Amp_20q12	0.678	1
KDM6A	Del_8p23.2	0.678	1
6p-Amp	Del_4q22.1	0.678	1
EGR1	Del_5q12.1	0.679	1
NF1	1q-Amp	0.679	1
MGA	PLEKHF2	0.679	1
MGA	8q-Amp	0.679	1
PRRG1	Del_1p33	0.679	1
TP53	8p-Amp	0.68	1
TXNDC2	18q-Del	0.68	1
BCOR	RLIM	0.68	1
NF1	22q-Del	0.68	1
C14orf184	Amp_20q11.21	0.68	1
IDH1	Amp_13q12.2	0.68	1
GMNN	Amp_13q22.1	0.68	1
9p-Amp	Del_8p23.2	0.68	1
RNF43	THOC7	0.681	1
TXNDC2	Amp_20p11.21	0.681	1
MLH1	Del_16q23.1	0.681	1
IQCD	4q-Del	0.681	1
PIK3R1	Amp_20p11.21	0.681	1
RLIM	Amp_12p13.32	0.681	1
7q-Amp	Del_10q25.2	0.681	1
Del_7q31.1	Del_8p23.2	0.682	1
ERBB2	Amp_12p13.32	0.683	1
PTEN	16p-Amp	0.683	1
Amp_12p13.32	Amp_17q24.1	0.683	1
APC	B2M	0.684	1
SMAD2	Del_6p25.3	0.684	1
FMN2	Amp_12p13.32	0.684	1
RPTN	Del_10q21.1	0.684	1
ATXN3L	Del_15q11.2	0.684	1
P2RY13	Del_10q25.2	0.684	1
NR1H3	Del_10q25.2	0.684	1
NLRC4	7p-Amp	0.684	1
NLRC4	Amp_11p15.5	0.684	1
TOP2B	Amp_5q22.3	0.684	1
TOP2B	Del_12p13.1	0.684	1
HLA-A	Del_10q21.1	0.684	1
FYN	Del_10q25.2	0.684	1
CTNNB1	Del_15q15.2	0.684	1
17q-Amp	Del_6p25.3	0.684	1
Amp_5q22.3	Del_19p13.3	0.684	1
NF1	HIST1H1T	0.685	1
CHUK	Amp_6p21.1	0.685	1
CHUK	Del_3p26.3	0.685	1
SMAD4	Del_14q11.2	0.685	1
HIST1H1T	Amp_8p11.21	0.685	1
Amp_10q22.3	Amp_20q12	0.685	1
Amp_13q22.1	Del_3p14.2	0.685	1
TXNDC2	Del_15q22.33	0.686	1
GMNN	8p-Del	0.686	1
KDM6A	8p-Del	0.686	1
Amp_1q31.1	Del_8p23.2	0.686	1
CDH1	7p-Amp	0.687	1
SELPLG	18p-Del	0.687	1
SELPLG	Del_16q23.1	0.687	1
ATXN3L	Del_8p22	0.687	1
ASXL1	Del_15q11.2	0.687	1
C2orf29	18p-Del	0.687	1
L1TD1	Del_16q23.1	0.687	1
FKBP9	Del_16q23.1	0.687	1
ALDH1A3	Del_16q23.1	0.687	1
NEXN	Del_8p22	0.687	1
PRPS1	20q-Amp	0.687	1
PTGDR	20q-Amp	0.687	1
20q-Amp	Del_7q31.1	0.687	1
APC	FAM9A	0.688	1
APC	Del_2q22.1	0.688	1
EGR1	Del_3p14.2	0.688	1
ST3GAL6	Del_3p14.2	0.688	1
PLEKHF2	4p-Del	0.688	1
PLEKHF2	Del_3p14.2	0.688	1
VCX2	4p-Del	0.688	1
PTEN	Del_5q21.2	0.688	1
BCORL1	Del_4q22.1	0.688	1
SLC12A6	Del_4q22.1	0.688	1
1q-Amp	Del_3p14.2	0.688	1
Amp_8p11.21	Del_15q15.2	0.688	1
SMAD2	PIK3R1	0.689	1
PLAGL2	Amp_8q24.21	0.689	1
PIK3R1	Amp_5q22.3	0.689	1
PIK3R1	Del_12p13.1	0.689	1
RB1	Del_1p36.11	0.689	1
8p-Amp	Amp_5q22.3	0.689	1
ATXN3L	20q-Amp	0.69	1
CDK12	Del_15q22.33	0.69	1
Amp_17q12	Del_6p25.3	0.69	1
THOC7	Del_18q22.1	0.691	1
ROS1	9p-Amp	0.691	1
MLH1	L1TD1	0.692	1
MLH1	Del_16p13.3	0.692	1
GGT1	Del_5q21.2	0.692	1
SMAD4	Del_3p14.2	0.692	1
HIST1H1T	Del_5q21.2	0.692	1
Amp_12p13.32	Del_21q11.2	0.692	1
CRIPAK	Amp_8q12.1	0.693	1
FAM123B	Del_16q23.1	0.693	1
ACVR1B	ATXN3L	0.693	1
ACVR1B	Amp_19p13.2	0.693	1
FMN2	Del_1p36.11	0.693	1
PRRG1	Del_15q15.2	0.693	1
PCBP1	SMAD4	0.693	1
RLIM	9p-Amp	0.693	1
RLIM	Amp_13q12.13	0.693	1
NEXN	Amp_16p11.2	0.693	1
KDM6A	Amp_2q33.1	0.693	1
8q-Amp	Del_10q25.2	0.693	1
1p-Del	Del_17q24.3	0.693	1
5q-Del	Amp_16p11.2	0.693	1
Amp_2q33.1	Amp_16p11.2	0.693	1
Amp_16p11.2	Amp_19p13.2	0.693	1
Amp_16p11.2	Del_3q26.31	0.693	1
CDH1	ZNF486	0.694	1
STARD3NL	ERBB2	0.694	1
STARD3NL	Amp_1q31.1	0.694	1
P2RY13	Amp_17q24.1	0.694	1
RB1	Del_1p33	0.694	1
PTEN	Amp_2q33.1	0.694	1
FAM123B	Del_7q31.1	0.695	1
RLIM	7q-Amp	0.695	1
Amp_1q31.1	Del_10q21.1	0.695	1
Amp_17q24.1	Del_10q21.1	0.695	1
ZFP36L2	20p-Del	0.696	1
CDH1	BCORL1	0.696	1
CDH1	Del_4q22.1	0.696	1
RBPJ	Amp_13q12.2	0.696	1
RBPJ	Del_22q13.32	0.696	1
CDK12	16p-Amp	0.696	1
CDK12	Del_8q11.1	0.696	1
16p-Amp	20p-Del	0.696	1
EGR1	7q-Amp	0.697	1
BCL9	12p-Amp	0.697	1
PLEKHF2	SETD2	0.697	1
NLRC4	IDH1	0.697	1
BCORL1	IDH1	0.697	1
TXNDC2	7q-Amp	0.698	1
STARD3NL	13q-Amp	0.698	1
NF1	Del_22q13.32	0.698	1
VCX2	13q-Amp	0.698	1
RB1	20p-Del	0.698	1
FYN	13q-Amp	0.698	1
CREBBP	Del_4q22.1	0.698	1
GMNN	Amp_13q12.13	0.698	1
7q-Amp	Del_6q26	0.698	1
8p-Del	Amp_5q22.3	0.698	1
Amp_8p11.21	Del_22q13.32	0.698	1
TP53	SLC26A8	0.699	1
SMAD2	1q-Amp	0.699	1
BIRC3	Del_10q23.31	0.699	1
IDH1	Amp_8q12.1	0.699	1
GMNN	Amp_20q13.31	0.699	1
17q-Amp	1q-Amp	0.699	1
CRIPAK	SELPLG	0.7	1
CRIPAK	MAPK6	0.7	1
CRIPAK	C2orf29	0.7	1
CRIPAK	L1TD1	0.7	1
CRIPAK	FKBP9	0.7	1
BCOR	SELPLG	0.7	1
MAPK6	Amp_20p11.21	0.7	1
RHOA	Amp_11p15.5	0.7	1
PRRG1	Del_15q21.1	0.7	1
RLIM	13q-Amp	0.7	1
BIRC3	Del_14q11.2	0.7	1
HIST1H1T	22q-Del	0.7	1
Amp_10q22.3	Del_14q11.2	0.7	1
ARID1A	Amp_19p13.2	0.701	1
TXNDC2	Del_3p26.3	0.701	1
CHUK	Del_6p25.3	0.701	1
CHUK	Del_19p13.3	0.701	1
C11orf30	Del_6p25.3	0.701	1
C11orf30	Del_19p13.3	0.701	1
SETD2	1q-Amp	0.701	1
PRPS1	13q-Amp	0.701	1
PTGDR	Amp_20q11.21	0.701	1
12p-Amp	Del_10q23.31	0.701	1
13q-Amp	Del_7q31.1	0.701	1
RNF43	Del_6p25.3	0.702	1
FMN2	Amp_16p11.2	0.702	1
NF2	6p-Amp	0.702	1
RBPJ	Amp_13q22.1	0.702	1
2p-Amp	Del_4q35.1	0.702	1
6p-Amp	Del_4q35.1	0.702	1
15q-Del	Amp_16p11.2	0.702	1
CRIPAK	Del_10q23.31	0.703	1
C14orf184	Del_18q12.2	0.703	1
ATM	Del_6p25.3	0.703	1
14q-Del	Amp_17q12	0.703	1
NR1H3	20p-Amp	0.704	1
PTCH1	Del_2q22.1	0.704	1
ROS1	8p-Amp	0.704	1
MPHOSPH10	8q-Amp	0.704	1
Amp_13q12.2	Del_6p25.3	0.704	1
Amp_16p11.2	Del_1p13.2	0.704	1
APC	ARID1A	0.705	1
CRIPAK	MLH1	0.705	1
FAM9A	8p-Amp	0.705	1
EGR1	Amp_17q12	0.705	1
THOC7	PIK3R1	0.705	1
ST3GAL6	ASXL1	0.705	1
NR1H3	Del_1p33	0.705	1
GRB2	PIK3R1	0.705	1
RSPH3	8p-Amp	0.705	1
RB1	Amp_16p11.2	0.705	1
DCLK2	Del_1p33	0.705	1
C14orf184	Amp_20q12	0.705	1
PTGDR	20p-Amp	0.705	1
20p-Amp	Del_7q31.1	0.705	1
8p-Amp	Del_2q22.1	0.705	1
Del_3q26.31	Del_18q22.1	0.705	1
APC	ALPK2	0.706	1
APC	8p-Del	0.706	1
ZFP36L2	Amp_8q12.1	0.706	1
SMAD2	PTCH1	0.706	1
THOC7	Del_18q21.2	0.706	1
FBXW7	16p-Amp	0.706	1
ATXN3L	Del_16q23.1	0.706	1
PTCH1	17q-Amp	0.706	1
DIP2B	SMAD4	0.706	1
SMAD4	9p-Amp	0.706	1
NEXN	Del_16q23.1	0.706	1
PTGDR	8q-Amp	0.706	1
Amp_8q12.1	Del_8q11.1	0.706	1
Del_3q26.31	Del_16q23.1	0.706	1
RNF43	Amp_1q31.1	0.707	1
B2M	Del_10q25.2	0.707	1
PTCH1	12p-Amp	0.707	1
MPHOSPH10	20p-Amp	0.707	1
DDX26B	Del_10q25.2	0.707	1
SMAD4	L1TD1	0.707	1
SMAD4	Del_16p13.3	0.707	1
CREBBP	2p-Amp	0.707	1
CREBBP	6p-Amp	0.707	1
8q-Amp	Del_22q13.32	0.707	1
C14orf184	Del_1p36.11	0.708	1
RHOA	12p-Amp	0.709	1
FAM9A	Amp_20p11.21	0.709	1
IQCD	Del_5q12.1	0.709	1
PRRG1	4q-Del	0.709	1
IFT57	12p-Amp	0.709	1
BCORL1	4p-Del	0.709	1
ZNF486	12p-Amp	0.709	1
15q-Del	Amp_1q31.1	0.709	1
CDH1	5q-Del	0.71	1
THOC7	RB1	0.71	1
RB1	Del_2q22.1	0.71	1
Amp_8p11.21	Del_14q11.2	0.71	1
Amp_8p11.21	Del_15q21.1	0.71	1
ACVR1B	IDH1	0.711	1
MAPK6	Amp_12p13.32	0.711	1
ZBTB20	KDM6A	0.711	1
ASXL1	Del_1p33	0.711	1
RLIM	7p-Amp	0.711	1
L1TD1	Amp_12p13.32	0.711	1
FKBP9	Amp_12p13.32	0.711	1
ATM	4p-Del	0.711	1
13q-Amp	Del_2p12	0.711	1
7p-Amp	1p-Del	0.711	1
21q-Del	8p-Del	0.711	1
Amp_8q24.21	Del_16q23.1	0.711	1
CRIPAK	Del_1p36.11	0.712	1
B2M	Del_21q11.2	0.712	1
NF2	16p-Amp	0.712	1
RPTN	Del_4q35.1	0.712	1
ERBB2	20p-Del	0.712	1
ALPK2	Amp_8q24.21	0.712	1
DDX26B	Del_21q11.2	0.712	1
RBPJ	14q-Del	0.712	1
CDK12	Amp_1q31.1	0.712	1
16p-Amp	Del_4q35.1	0.712	1
7p-Amp	Del_10q21.1	0.712	1
20p-Del	Amp_1q31.1	0.712	1
20p-Del	Amp_17q24.1	0.712	1
RNF43	VCX2	0.713	1
WNT1	Del_15q15.2	0.713	1
SELPLG	9p-Amp	0.713	1
MAPK6	9p-Amp	0.713	1
MAPK6	Del_17q24.3	0.713	1
PRKDC	2p-Amp	0.713	1
CHUK	8p-Amp	0.713	1
PIK3R1	Del_3p26.3	0.713	1
C2orf29	9p-Amp	0.713	1
FKBP9	Del_17q24.3	0.713	1
ALDH1A3	9p-Amp	0.713	1
LARP4B	Del_16p13.3	0.713	1
6p-Amp	Del_22q13.32	0.713	1
9p-Amp	Del_16p13.3	0.713	1
SMAD2	BCORL1	0.714	1
SMAD2	SLC12A6	0.714	1
RPTN	Del_17p12	0.714	1
NLRC4	17q-Amp	0.714	1
PRRG1	Del_15q11.2	0.714	1
BCORL1	Amp_5q22.3	0.714	1
SETD2	8p-Amp	0.714	1
SLC12A6	Amp_5q22.3	0.714	1
SLC12A6	Del_12p13.1	0.714	1
PRPS1	15q-Del	0.714	1
PTGDR	15q-Del	0.714	1
GMNN	Amp_8p11.21	0.714	1
1q-Amp	Del_15q22.33	0.714	1
Amp_5q22.3	Del_1p36.11	0.714	1
Amp_8q24.21	Del_12p13.1	0.715	1
SOX9	ROS1	0.716	1
CDH1	Amp_8p11.21	0.716	1
RBBP7	8p-Del	0.716	1
TOP2B	Del_6p25.3	0.716	1
TOP2B	Del_19p13.3	0.716	1
TOP2B	Del_21q11.2	0.716	1
CTNNB1	Del_19p13.3	0.716	1
1q-Amp	Del_3p26.3	0.716	1
7q-Amp	Amp_11p15.5	0.716	1
Amp_8p11.21	Del_10q21.1	0.716	1
Del_5q22.2	Del_16q23.1	0.716	1
Del_7q31.1	Del_18q22.1	0.716	1
ACVR1B	Del_5q12.1	0.717	1
FBXW7	IFT57	0.717	1
IQCD	4p-Del	0.717	1
IQCD	Amp_8q12.1	0.717	1
IFT57	Del_3p14.2	0.717	1
ROS1	Amp_8q24.21	0.717	1
MAP4K3	Amp_8p11.21	0.717	1
ZNF486	Amp_8q12.1	0.717	1
12p-Amp	Del_1p36.11	0.717	1
12p-Amp	Del_8p22	0.717	1
Amp_16p11.2	Del_5q12.1	0.717	1
TP53	B2M	0.718	1
TP53	OR4D10	0.718	1
SOX9	BIRC3	0.718	1
B2M	ERBB2	0.718	1
B2M	Amp_17q24.1	0.718	1
WNT1	Del_15q21.1	0.718	1
NF1	Amp_17q24.1	0.718	1
MGA	4q-Del	0.718	1
ERBB2	DDX26B	0.718	1
PLAGL2	7q-Amp	0.718	1
DDX26B	Amp_1q31.1	0.718	1
RBPJ	Amp_1q31.1	0.718	1
RBPJ	Amp_17q24.1	0.718	1
ALDH1A3	Amp_8q24.21	0.718	1
12p-Amp	4q-Del	0.718	1
7q-Amp	Del_2p12	0.718	1
CRIPAK	5q-Del	0.719	1
CRIPAK	Amp_2q33.1	0.719	1
SOX9	Amp_11p15.5	0.719	1
BCOR	Amp_19p13.2	0.719	1
SMAD2	Amp_20p11.21	0.719	1
RPTN	BMPR2	0.719	1
C2orf29	Amp_13q12.2	0.719	1
BMPR2	Del_8q11.1	0.719	1
Amp_20p11.21	Del_12p13.1	0.719	1
MLH1	Amp_2q33.1	0.72	1
MLH1	Amp_19p13.2	0.72	1
SELPLG	Del_5q22.2	0.72	1
DIP2B	Amp_20p11.21	0.72	1
C2orf29	Del_5q22.2	0.72	1
ALDH1A3	Del_5q22.2	0.72	1
Amp_10q22.3	Amp_20q13.31	0.72	1
ARID1A	4q-Del	0.721	1
TXNDC2	20q-Amp	0.721	1
SMAD2	Del_4p16.2	0.721	1
RPTN	Del_15q22.33	0.721	1
PTGDR	Del_4q22.1	0.721	1
ERBB2	Del_4q22.1	0.722	1
CDK12	21q-Del	0.722	1
IDH1	Amp_13q12.13	0.722	1
CTNNB1	Del_22q13.32	0.722	1
Amp_1q31.1	Del_4q22.1	0.722	1
APC	LARP4B	0.723	1
APC	9p-Amp	0.723	1
APC	Amp_2q33.1	0.723	1
WNT1	Amp_8p11.23	0.723	1
STARD3NL	Del_1p36.11	0.723	1
NR1H3	Del_1p36.11	0.723	1
PTCH1	16p-Amp	0.723	1
PCBP1	Del_1p36.11	0.723	1
FYN	Del_1p36.11	0.723	1
GMPS	Amp_8p11.21	0.723	1
17q-Amp	Del_15q15.2	0.723	1
2q-Amp	Del_14q31.1	0.723	1
RNF43	1q-Amp	0.724	1
TP53	Del_6q26	0.724	1
NF1	Amp_17q12	0.724	1
P2RY13	Del_10q23.31	0.724	1
NR1H3	Del_10q23.31	0.724	1
ASXL1	Amp_8p11.21	0.724	1
PCBP1	Del_10q23.31	0.724	1
MAP4K3	Del_16q23.1	0.724	1
CDK12	Del_21q11.2	0.724	1
GMPS	Amp_8q24.21	0.724	1
IDH1	Del_16q23.1	0.724	1
12p-Amp	Del_5q21.2	0.724	1
16q-Amp	Del_10q23.31	0.724	1
6p-Amp	Del_21q11.2	0.724	1
FMN2	Del_14q11.2	0.725	1
SELPLG	Del_10q21.1	0.725	1
SLC26A8	Del_10q21.1	0.725	1
Amp_17q24.1	Del_15q15.2	0.725	1
SELPLG	Amp_13q22.1	0.726	1
SMAD4	Del_1p36.11	0.726	1
8q-Amp	Del_4p16.2	0.726	1
17p-Del	Amp_5q22.3	0.726	1
RNF43	Amp_12p13.32	0.727	1
MLH1	TPRKB	0.727	1
MLH1	HIST1H1T	0.727	1
WNT1	Del_15q11.2	0.727	1
FMN2	Del_16q23.1	0.727	1
THOC7	Del_5q21.2	0.727	1
ERBB2	17p-Del	0.727	1
GRB2	Del_4p16.2	0.727	1
PRRG1	Del_1p13.2	0.727	1
RSPH3	Del_5q21.2	0.727	1
BMPR2	Amp_8q12.1	0.727	1
BIRC3	Del_1p13.2	0.727	1
Amp_10q22.3	Amp_20p11.21	0.727	1
Del_2q22.1	Del_4p16.2	0.727	1
Del_8p23.2	Del_16q23.1	0.727	1
APC	GPATCH8	0.728	1
APC	16q-Amp	0.728	1
ARID1A	Amp_10q22.3	0.728	1
ACVR1B	SMAD2	0.728	1
ACVR1B	Amp_5q22.3	0.728	1
SMAD2	Amp_16p11.2	0.728	1
NF2	8p-Amp	0.728	1
THOC7	Amp_13q22.1	0.728	1
PTCH1	Del_16q23.1	0.728	1
DDX26B	Del_1p33	0.728	1
RBPJ	Del_1p33	0.728	1
RB1	Del_8p23.2	0.728	1
GMPS	Del_1p33	0.728	1
PRPS1	Amp_20q12	0.728	1
PTGDR	Amp_20q12	0.728	1
KDM6A	Del_12p13.1	0.728	1
FAM123B	ATXN3L	0.729	1
FAM123B	Amp_2q33.1	0.729	1
FMN2	SELPLG	0.729	1
FMN2	ALDH1A3	0.729	1
FMN2	Del_16p13.3	0.729	1
RPTN	Del_10q25.2	0.729	1
CHUK	8q-Amp	0.729	1
PLEKHF2	Del_8p22	0.729	1
VCX2	Del_8p22	0.729	1
RBBP7	Del_22q13.32	0.729	1
C14orf184	Amp_20q13.31	0.729	1
HLA-A	Del_10q25.2	0.729	1
HLA-A	Del_22q13.32	0.729	1
16p-Amp	Del_10q25.2	0.729	1
Del_7q31.1	Del_18q21.2	0.729	1
SOX9	BCOR	0.73	1
ACVR1B	Del_3p14.2	0.73	1
FMN2	Del_1p33	0.73	1
NLRC4	Amp_6p21.1	0.73	1
ROS1	Amp_8p11.23	0.73	1
FYN	Del_15q15.2	0.73	1
LARP4B	Amp_8q12.1	0.73	1
BCORL1	Amp_6p21.1	0.73	1
SLC12A6	Amp_6p21.1	0.73	1
SLC12A6	Del_3p26.3	0.73	1
16q-Amp	Del_15q15.2	0.73	1
SELPLG	Del_8p23.2	0.731	1
MAPK6	7q-Amp	0.731	1
ASXL1	8p-Amp	0.731	1
C2orf29	7q-Amp	0.731	1
C2orf29	Del_8p23.2	0.731	1
ALDH1A3	7q-Amp	0.731	1
17q-Amp	Del_15q21.1	0.731	1
1q-Amp	Del_6p25.3	0.731	1
18q-Del	Del_3q26.31	0.731	1
ZFP36L2	18p-Del	0.732	1
ATXN3L	9p-Amp	0.732	1
ATXN3L	Del_17q24.3	0.732	1
RBPJ	Amp_13q12.13	0.732	1
SETD2	Del_10q23.31	0.732	1
NEXN	9p-Amp	0.732	1
ATM	Del_16q23.1	0.732	1
17q-Amp	21q-Del	0.732	1
7q-Amp	14q-Del	0.732	1
9p-Amp	5q-Del	0.732	1
9p-Amp	Amp_2q33.1	0.732	1
9p-Amp	Amp_19p13.2	0.732	1
21q-Del	Amp_5q22.3	0.732	1
Amp_2q33.1	Del_17q24.3	0.732	1
Amp_8p11.23	Del_15q22.33	0.732	1
FAM123B	GGT1	0.733	1
FAM123B	TPRKB	0.733	1
ACVR1B	SMAD4	0.733	1
PTCH1	Del_3p14.2	0.733	1
8p-Del	Del_3p26.3	0.733	1
SOX9	Del_5q12.1	0.734	1
RHOA	ALPK2	0.734	1
RHOA	ASXL1	0.734	1
THOC7	22q-Del	0.734	1
P2RY13	4q-Del	0.734	1
IQCD	Amp_8q24.21	0.734	1
IQCD	Amp_17q12	0.734	1
PCBP1	4q-Del	0.734	1
RSPH3	21q-Del	0.734	1
RSPH3	22q-Del	0.734	1
RB1	Del_8p22	0.734	1
DCLK2	4q-Del	0.734	1
GPATCH8	4q-Del	0.734	1
ZNF486	Amp_8q24.21	0.734	1
16q-Amp	4q-Del	0.734	1
22q-Del	Del_2q22.1	0.734	1
APC	8p-Amp	0.735	1
PIK3R1	Del_15q15.2	0.735	1
8p-Amp	Del_15q15.2	0.735	1
FMN2	Del_4q22.1	0.736	1
CHUK	7p-Amp	0.736	1
MGA	Amp_10q22.3	0.736	1
MVK	12p-Amp	0.736	1
PIK3R1	VCX2	0.736	1
PIK3R1	Del_19p13.3	0.736	1
VCX2	8p-Amp	0.736	1
TOP2B	8p-Amp	0.736	1
BIRC3	12p-Amp	0.736	1
BIRC3	Del_5q12.1	0.736	1
12p-Amp	Amp_10q22.3	0.736	1
7q-Amp	Del_1p33	0.736	1
8p-Amp	Del_6q26	0.736	1
Del_7q31.1	Del_18p11.31	0.736	1
ARID1A	C14orf184	0.737	1
ARID1A	2q-Amp	0.737	1
CRIPAK	ZBTB20	0.737	1
SELPLG	20p-Del	0.737	1
NF1	Del_2q22.1	0.737	1
ERBB2	Del_14q11.2	0.737	1
SMAD4	6p-Amp	0.737	1
SMAD4	Amp_13q12.13	0.737	1
L1TD1	20p-Del	0.737	1
FYN	Del_15q21.1	0.737	1
ALDH1A3	20p-Del	0.737	1
CDK12	8q-Amp	0.737	1
CDK12	Del_16p13.3	0.737	1
16q-Amp	Del_15q21.1	0.737	1
Amp_1q31.1	Del_14q11.2	0.737	1
Amp_8p11.21	Del_2q22.1	0.737	1
Amp_17q24.1	Del_15q21.1	0.737	1
TXNDC2	Del_18q12.2	0.738	1
C2orf29	Del_4q22.1	0.738	1
NEXN	Amp_12p13.32	0.738	1
5q-Del	Amp_12p13.32	0.738	1
FAM123B	9p-Amp	0.739	1
FBXW7	PTGDR	0.739	1
MGA	21q-Del	0.739	1
BMPR2	1p-Del	0.739	1
Amp_8q12.1	Del_7q31.1	0.739	1
Amp_11p15.5	Del_15q22.33	0.739	1
TP53	IDH1	0.74	1
ZFP36L2	ERBB2	0.74	1
ZFP36L2	Amp_1q31.1	0.74	1
ZFP36L2	Del_18q12.2	0.74	1
RHOA	7q-Amp	0.74	1
RPTN	Amp_17q24.1	0.74	1
TPRKB	Amp_12p13.32	0.74	1
ERBB2	Del_8q11.1	0.74	1
IQCD	7q-Amp	0.74	1
IFT57	7q-Amp	0.74	1
RBBP7	Amp_1q31.1	0.74	1
RBBP7	Amp_17q24.1	0.74	1
BCORL1	Del_15q22.33	0.74	1
15q-Del	Amp_8p11.23	0.74	1
CDH1	2q-Amp	0.741	1
SMAD2	FBXW7	0.741	1
SMAD2	Del_16q23.1	0.741	1
THOC7	ROS1	0.741	1
PTCH1	Amp_6p21.1	0.741	1
ROS1	17q-Amp	0.741	1
ROS1	Amp_5q22.3	0.741	1
Amp_5q22.3	Del_16q23.1	0.741	1
TP53	IQCD	0.742	1
PIK3R1	Del_15q22.33	0.742	1
SETD2	Amp_16p11.2	0.742	1
8p-Amp	Del_15q22.33	0.742	1
Del_3p14.2	Del_5q21.2	0.742	1
SOX9	STARD3NL	0.743	1
SOX9	NR1H3	0.743	1
SOX9	GPATCH8	0.743	1
SOX9	16q-Amp	0.743	1
BCOR	Del_1p13.2	0.743	1
CHUK	Del_1p36.11	0.743	1
RLIM	Del_4q35.1	0.743	1
14q-Del	Amp_8p11.21	0.743	1
Amp_19p13.2	Del_10q21.1	0.743	1
ZFP36L2	Amp_20p11.21	0.744	1
ZFP36L2	Del_21q11.2	0.744	1
THOC7	ATM	0.744	1
NR1H3	Amp_8p11.23	0.744	1
PRRG1	4p-Del	0.744	1
PRRG1	Del_3p14.2	0.744	1
ROS1	15q-Del	0.744	1
ROS1	Del_15q11.2	0.744	1
RBBP7	14q-Del	0.744	1
PTEN	1p-Del	0.744	1
PTEN	Amp_12p13.32	0.744	1
PTGDR	Del_4q35.1	0.744	1
BIRC3	Del_3p14.2	0.744	1
ATM	Del_2q22.1	0.744	1
16p-Amp	Del_21q11.2	0.744	1
Amp_10q22.3	Del_3p14.2	0.744	1
TXNDC2	BCL9	0.745	1
MLH1	MAP4K3	0.745	1
BCL9	Del_19p13.3	0.745	1
RB1	4p-Del	0.745	1
RB1	Del_3p14.2	0.745	1
SLC12A6	Del_6q26	0.745	1
SLC12A6	Del_19p13.3	0.745	1
Del_3p26.3	Del_5q21.2	0.745	1
CRIPAK	Del_18q21.2	0.746	1
MLH1	Del_1p36.11	0.746	1
GGT1	Del_5q22.2	0.746	1
HIST1H1T	Del_5q22.2	0.746	1
CTNNB1	Del_16p13.3	0.746	1
Amp_13q12.13	Del_6p25.3	0.746	1
Amp_17q12	Del_10q23.31	0.746	1
ATXN3L	Del_5q22.2	0.747	1
DDX26B	Del_10q23.31	0.747	1
NEXN	Del_5q22.2	0.747	1
8q-Amp	Del_16p13.3	0.747	1
SOX9	DIP2B	0.748	1
ERBB2	Del_14q31.1	0.748	1
HIST1H1T	Amp_8q24.21	0.748	1
17q-Amp	Del_15q11.2	0.748	1
MLH1	Del_10q21.1	0.749	1
BCOR	15q-Del	0.749	1
NF1	Amp_13q12.13	0.749	1
ZBTB20	9p-Amp	0.749	1
NLRC4	Del_22q13.32	0.749	1
PIK3R1	Del_14q11.2	0.749	1
PIK3R1	Del_15q21.1	0.749	1
RB1	Amp_6p21.1	0.749	1
C14orf184	Del_18q22.1	0.749	1
BMPR2	Del_5q21.2	0.749	1
SLC12A6	Del_22q13.32	0.749	1
PRPS1	CREBBP	0.749	1
PRPS1	Del_15q22.33	0.749	1
PTGDR	Del_15q22.33	0.749	1
IDH1	9p-Amp	0.749	1
CREBBP	Del_7q31.1	0.749	1
ZFP36L2	Del_1p33	0.75	1
ATXN3L	Amp_20q12	0.75	1
DIP2B	Amp_12p13.32	0.75	1
SMAD4	Del_4p16.2	0.75	1
LARP4B	Amp_12p13.32	0.75	1
Amp_8q24.21	Del_4p16.2	0.75	1
Amp_12p13.32	Del_17q24.3	0.75	1
Amp_20q12	Del_3q26.31	0.75	1
ARID1A	21q-Del	0.751	1
STARD3NL	Del_1p13.2	0.751	1
P2RY13	Amp_11p15.5	0.751	1
PCBP1	Amp_11p15.5	0.751	1
MPHOSPH10	Amp_8q12.1	0.751	1
DCLK2	Amp_11p15.5	0.751	1
DCLK2	Del_1p13.2	0.751	1
FYN	Amp_11p15.5	0.751	1
FYN	Del_1p13.2	0.751	1
CTNNB1	Del_10q21.1	0.751	1
ARID1A	Del_15q21.1	0.752	1
FMN2	GGT1	0.752	1
TPRKB	15q-Del	0.752	1
8q-Amp	21q-Del	0.752	1
Amp_8p11.21	Del_15q11.2	0.752	1
BCOR	17q-Amp	0.753	1
BCOR	Amp_5q22.3	0.753	1
SMAD2	NF1	0.753	1
SMAD2	Amp_8p11.21	0.753	1
MPHOSPH10	8p-Del	0.753	1
SMAD4	Del_3q26.31	0.753	1
PTGDR	Amp_20q13.31	0.754	1
14q-Del	Amp_8q12.1	0.754	1
APC	Del_19p13.3	0.755	1
PRKDC	PRPS1	0.755	1
PRKDC	8p-Amp	0.755	1
PRKDC	Del_7q31.1	0.755	1
ATXN3L	20p-Del	0.755	1
MGA	Amp_8q12.1	0.755	1
C11orf30	21q-Del	0.755	1
CDK12	NEXN	0.755	1
PTGDR	Del_22q13.32	0.755	1
2p-Amp	Del_1p36.11	0.755	1
6p-Amp	Del_1p36.11	0.755	1
8q-Amp	14q-Del	0.755	1
20p-Del	Del_3q26.31	0.755	1
Del_7q31.1	Del_22q13.32	0.755	1
FMN2	Del_3q26.31	0.756	1
C2orf29	Amp_13q12.13	0.756	1
KDM6A	Del_8p22	0.756	1
15q-Del	Amp_2q33.1	0.756	1
Amp_8q12.1	Del_14q11.2	0.756	1
CHUK	Del_16q23.1	0.757	1
RBPJ	Del_1p36.11	0.757	1
EGR1	Del_5q21.2	0.758	1
ST3GAL6	Del_5q21.2	0.758	1
RLIM	Del_22q13.32	0.758	1
BMPR2	Del_16p13.3	0.758	1
ATM	7q-Amp	0.758	1
HIST1H1T	Del_4q22.1	0.758	1
9p-Amp	Del_14q11.2	0.758	1
ACVR1B	Del_6p25.3	0.759	1
ATXN3L	Amp_20p11.21	0.759	1
TOP2B	Amp_16p11.2	0.759	1
C14orf184	Del_18q21.2	0.759	1
BMPR2	Del_1p33	0.759	1
BCORL1	Amp_8q24.21	0.759	1
CREBBP	Del_10q25.2	0.759	1
KDM6A	Del_6p25.3	0.759	1
KDM6A	Del_19p13.3	0.759	1
Amp_8p11.23	Del_4q22.1	0.759	1
Amp_16p11.2	Del_6q26	0.759	1
Amp_19p13.2	Amp_20p11.21	0.759	1
APC	MAPK6	0.76	1
APC	SLC26A8	0.76	1
APC	FKBP9	0.76	1
RNF43	Del_10q23.31	0.76	1
FAM123B	Del_10q21.1	0.76	1
MGA	PCBP1	0.76	1
BCL9	1q-Amp	0.76	1
ERBB2	MPHOSPH10	0.76	1
NR1H3	12p-Amp	0.76	1
ASXL1	PRRG1	0.76	1
ASXL1	Amp_10q22.3	0.76	1
NLRC4	1q-Amp	0.76	1
PRRG1	Amp_17q12	0.76	1
PCBP1	12p-Amp	0.76	1
PCBP1	Del_5q12.1	0.76	1
RLIM	Amp_1q31.1	0.76	1
FYN	12p-Amp	0.76	1
BCORL1	1q-Amp	0.76	1
GPATCH8	12p-Amp	0.76	1
SLC12A6	1q-Amp	0.76	1
16q-Amp	Del_5q12.1	0.76	1
9p-Amp	Del_1p13.2	0.76	1
1p-Del	Amp_1q31.1	0.76	1
Amp_8q24.21	Del_14q31.1	0.76	1
Amp_11p15.5	Del_17q24.3	0.76	1
Del_1p13.2	Del_17q24.3	0.76	1
MLH1	Del_22q13.32	0.761	1
CRIPAK	Del_17p12	0.762	1
SELPLG	20p-Amp	0.762	1
TPRKB	8q-Amp	0.762	1
ALPK2	4q-Del	0.762	1
C2orf29	20p-Amp	0.762	1
HIST1H1T	8q-Amp	0.762	1
ACVR1B	PTEN	0.763	1
RBBP7	Amp_8p11.21	0.763	1
IDH1	Amp_12p13.32	0.763	1
Amp_8p11.21	Del_8q11.1	0.763	1
ARID1A	Amp_5q22.3	0.764	1
OR4D10	20p-Amp	0.764	1
RHOA	8p-Amp	0.764	1
ATXN3L	7q-Amp	0.764	1
IQCD	8p-Amp	0.764	1
DIP2B	17p-Del	0.764	1
IFT57	13q-Amp	0.764	1
IFT57	8p-Amp	0.764	1
GMPS	20p-Amp	0.764	1
4q-Del	Amp_12p13.32	0.764	1
Amp_16p11.2	Del_15q22.33	0.764	1
FAM123B	8p-Amp	0.765	1
SOX9	B2M	0.765	1
ZFP36L2	Amp_20q11.21	0.765	1
TXNDC2	8q-Amp	0.765	1
SMAD2	9p-Amp	0.765	1
NF2	Del_3p14.2	0.765	1
PLEKHF2	22q-Del	0.765	1
DIP2B	17q-Amp	0.765	1
DIP2B	Amp_5q22.3	0.765	1
VCX2	21q-Del	0.765	1
VCX2	22q-Del	0.765	1
PTEN	Del_8p22	0.765	1
LARP4B	Amp_5q22.3	0.765	1
LARP4B	Del_12p13.1	0.765	1
17q-Amp	9p-Amp	0.765	1
17q-Amp	Del_17q24.3	0.765	1
4p-Del	Amp_11p15.5	0.765	1
Amp_12p13.32	Del_4q35.1	0.765	1
PRPS1	Del_21q11.2	0.766	1
FAM123B	THOC7	0.767	1
TXNDC2	Del_4p16.2	0.767	1
BCOR	4p-Del	0.767	1
TPRKB	7p-Amp	0.767	1
ALPK2	8q-Amp	0.767	1
TOP2B	Del_4p16.2	0.767	1
TOP2B	Del_5q21.2	0.767	1
ATM	Del_10q23.31	0.767	1
HIST1H1T	7p-Amp	0.767	1
7p-Amp	Del_1p33	0.767	1
RNF43	Amp_10q22.3	0.768	1
STARD3NL	Del_3p14.2	0.768	1
BCL9	14q-Del	0.768	1
P2RY13	4p-Del	0.768	1
DIP2B	Amp_8p11.23	0.768	1
PCBP1	Del_3p14.2	0.768	1
PIK3R1	7q-Amp	0.768	1
HLA-A	Del_10q23.31	0.768	1
FYN	Del_3p14.2	0.768	1
GPATCH8	4p-Del	0.768	1
SLC12A6	Del_21q11.2	0.768	1
20p-Amp	Amp_12p13.32	0.768	1
9p-Amp	Del_14q31.1	0.768	1
Amp_8p11.23	Del_3p26.3	0.768	1
CRIPAK	C11orf30	0.769	1
CRIPAK	Amp_6p21.1	0.769	1
CRIPAK	Del_3p26.3	0.769	1
MLH1	17q-Amp	0.769	1
MLH1	20p-Del	0.769	1
MLH1	Amp_5q22.3	0.769	1
MLH1	Del_12p13.1	0.769	1
BCOR	Del_3p26.3	0.769	1
SELPLG	Del_10q25.2	0.769	1
RHOA	20p-Amp	0.769	1
C2orf29	Del_10q25.2	0.769	1
SLC26A8	Del_10q25.2	0.769	1
L1TD1	Del_10q25.2	0.769	1
ZNF486	20p-Amp	0.769	1
2p-Amp	18q-Del	0.769	1
TXNDC2	Del_1p36.11	0.77	1
CDH1	FYN	0.77	1
CDH1	16q-Amp	0.77	1
BCOR	Del_8p23.2	0.77	1
ATXN3L	Amp_8q24.21	0.77	1
RLIM	Del_1p33	0.77	1
RBPJ	Del_14q11.2	0.77	1
SMAD4	8q-Amp	0.77	1
NEXN	Amp_8q24.21	0.77	1
GMNN	7p-Amp	0.77	1
TXNDC2	Del_16q23.1	0.771	1
FMN2	9p-Amp	0.771	1
CTNNB1	Del_1p36.11	0.771	1
12p-Amp	Del_18q22.1	0.771	1
9p-Amp	15q-Del	0.771	1
8p-Del	Amp_17q12	0.771	1
Del_6p25.3	Del_16q23.1	0.771	1
Del_16q23.1	Del_19p13.3	0.771	1
CDH1	17q-Amp	0.772	1
WNT1	7q-Amp	0.772	1
ZBTB20	Del_5q22.2	0.772	1
NR1H3	8q-Amp	0.772	1
ALPK2	Del_16q23.1	0.772	1
ALG12	7q-Amp	0.772	1
RB1	Amp_8q24.21	0.772	1
DCLK2	8q-Amp	0.772	1
MAP4K3	Del_5q22.2	0.772	1
SETD2	Del_15q15.2	0.772	1
12p-Amp	Del_17q24.3	0.772	1
9p-Amp	Del_5q12.1	0.772	1
TXNDC2	7p-Amp	0.773	1
RSPH3	Amp_12p13.32	0.773	1
PTGDR	Amp_20p11.21	0.773	1
MLH1	Del_1p13.2	0.774	1
ERBB2	Amp_1q31.1	0.774	1
PIK3R1	Del_15q11.2	0.774	1
DDX26B	Amp_11p15.5	0.774	1
RBPJ	Del_1p13.2	0.774	1
8p-Amp	Del_15q11.2	0.774	1
ALPK2	Del_4p16.2	0.775	1
ASXL1	Del_4p16.2	0.775	1
RB1	4q-Del	0.775	1
4p-Del	Amp_8p11.23	0.775	1
TXNDC2	22q-Del	0.776	1
PTEN	Del_5q22.2	0.776	1
SETD2	16q-Amp	0.776	1
NEXN	Amp_13q12.2	0.776	1
22q-Del	Del_6p25.3	0.776	1
TP53	Del_10q21.1	0.777	1
FAM123B	Del_22q13.32	0.777	1
ZFP36L2	4q-Del	0.777	1
OR4D10	Amp_8p11.23	0.777	1
RPTN	4q-Del	0.777	1
BCL9	8p-Amp	0.777	1
NLRC4	8p-Amp	0.777	1
ROS1	8q-Amp	0.777	1
RBPJ	Del_14q31.1	0.777	1
RBBP7	4q-Del	0.777	1
HLA-A	4q-Del	0.777	1
GMPS	Amp_8p11.23	0.777	1
CREBBP	4p-Del	0.777	1
17q-Amp	Del_10q21.1	0.777	1
Amp_5q22.3	Del_10q21.1	0.777	1
CRIPAK	SETD2	0.778	1
MLH1	Del_5q22.2	0.778	1
PRRG1	7q-Amp	0.778	1
DCLK2	7p-Amp	0.778	1
BIRC3	7q-Amp	0.778	1
HIST1H1T	20p-Amp	0.778	1
ZFP36L2	Amp_8q24.21	0.779	1
SELPLG	Amp_1q31.1	0.779	1
SELPLG	Amp_17q24.1	0.779	1
FAM9A	Del_5q22.2	0.779	1
RPTN	Amp_8q24.21	0.779	1
THOC7	Del_5q22.2	0.779	1
CHUK	Amp_8q12.1	0.779	1
MGA	4p-Del	0.779	1
ERBB2	SLC26A8	0.779	1
ERBB2	L1TD1	0.779	1
C2orf29	Amp_1q31.1	0.779	1
SLC26A8	Amp_17q24.1	0.779	1
FKBP9	Amp_1q31.1	0.779	1
CTNNB1	Amp_2q33.1	0.779	1
CTNNB1	Del_3q26.31	0.779	1
Amp_1q31.1	Del_15q22.33	0.779	1
Amp_17q24.1	Del_15q22.33	0.779	1
Del_3q26.31	Del_18q12.2	0.779	1
GGT1	NF2	0.78	1
TPRKB	Del_4q35.1	0.78	1
ALG12	CTNNB1	0.78	1
HIST1H1T	Del_4q35.1	0.78	1
IDH1	15q-Del	0.78	1
CHUK	Del_17q24.3	0.781	1
DIP2B	Amp_6p21.1	0.781	1
DIP2B	Del_3p26.3	0.781	1
PIK3R1	14q-Del	0.781	1
C14orf184	Del_8p23.2	0.781	1
2q-Amp	Del_8p23.2	0.781	1
OR4D10	12p-Amp	0.782	1
DDX26B	12p-Amp	0.782	1
NEXN	Amp_13q22.1	0.782	1
GMPS	12p-Amp	0.782	1
ARID1A	2p-Amp	0.783	1
ARID1A	6p-Amp	0.783	1
PRKDC	Amp_8q24.21	0.783	1
LARP4B	Del_3p14.2	0.783	1
4p-Del	Amp_8q12.1	0.783	1
CRIPAK	TOP2B	0.784	1
CRIPAK	Del_6p25.3	0.784	1
CRIPAK	Del_6q26	0.784	1
CRIPAK	Del_19p13.3	0.784	1
BCOR	Del_6q26	0.784	1
P2RY13	Amp_17q12	0.784	1
ALPK2	16q-Amp	0.784	1
ASXL1	PCBP1	0.784	1
DCLK2	Amp_17q12	0.784	1
Amp_13q12.2	Del_7q31.1	0.784	1
SELPLG	Del_22q13.32	0.785	1
IQCD	8p-Del	0.785	1
GRB2	15q-Del	0.785	1
ROS1	Del_19p13.3	0.785	1
C2orf29	Del_22q13.32	0.785	1
L1TD1	Del_22q13.32	0.785	1
BMPR2	Del_10q23.31	0.785	1
NEXN	8q-Amp	0.785	1
ZNF486	Del_4p16.2	0.785	1
ZNF486	Del_5q21.2	0.785	1
1q-Amp	Del_16q23.1	0.785	1
Amp_17q24.1	Del_5q21.2	0.785	1
SOX9	RBBP7	0.786	1
SOX9	16p-Amp	0.786	1
SOX9	Del_8q11.1	0.786	1
CHUK	Amp_8p11.21	0.786	1
TPRKB	Del_15q22.33	0.786	1
NLRC4	Amp_16p11.2	0.786	1
BCORL1	Amp_16p11.2	0.786	1
SLC12A6	Amp_16p11.2	0.786	1
HIST1H1T	CREBBP	0.786	1
Amp_20q13.31	Del_3q26.31	0.786	1
ZFP36L2	Del_1p36.11	0.787	1
ACVR1B	7q-Amp	0.787	1
CDH1	6p-Amp	0.787	1
SELPLG	8p-Del	0.787	1
MAPK6	8p-Del	0.787	1
ERBB2	Del_1p33	0.787	1
16p-Amp	Del_1p36.11	0.787	1
Amp_17q24.1	Del_1p33	0.787	1
FMN2	4q-Del	0.788	1
ROS1	7p-Amp	0.788	1
MPHOSPH10	Del_10q23.31	0.788	1
SLC26A8	Del_1p33	0.788	1
PTEN	Del_10q23.31	0.788	1
ALDH1A3	Del_1p33	0.788	1
PRPS1	Amp_13q22.1	0.788	1
ATM	2p-Amp	0.788	1
ATM	Del_5q21.2	0.788	1
ATM	Del_8p23.2	0.788	1
12p-Amp	Del_10q21.1	0.788	1
20p-Del	Amp_5q22.3	0.788	1
ZFP36L2	Del_8p23.2	0.789	1
RPTN	Del_8p23.2	0.789	1
FBXW7	GMNN	0.789	1
GMNN	Amp_8q12.1	0.789	1
CTNNB1	Amp_10q22.3	0.789	1
8p-Amp	Del_18p11.31	0.789	1
ARID1A	Amp_8p11.21	0.79	1
SELPLG	Del_8p22	0.79	1
OR4D10	Del_3p14.2	0.79	1
THOC7	Del_4q22.1	0.79	1
ERBB2	Amp_8q12.1	0.79	1
PIK3R1	Amp_10q22.3	0.79	1
C2orf29	Del_8p22	0.79	1
DDX26B	Del_3p14.2	0.79	1
RBPJ	4p-Del	0.79	1
GMPS	Del_3p14.2	0.79	1
BIRC3	8p-Amp	0.79	1
ACVR1B	Del_21q11.2	0.791	1
MLH1	Del_3p26.3	0.791	1
FMN2	Del_10q21.1	0.791	1
MAPK6	Amp_8q12.1	0.791	1
MVK	Amp_8q24.21	0.791	1
PRRG1	Amp_8q24.21	0.791	1
SMAD4	Del_8q11.1	0.791	1
FKBP9	Amp_8q12.1	0.791	1
ALDH1A3	Amp_8q12.1	0.791	1
HIST1H1T	Del_22q13.32	0.791	1
Amp_8p11.23	Del_10q21.1	0.791	1
Amp_16p11.2	Del_21q11.2	0.791	1
Amp_17q12	Del_15q15.2	0.791	1
ZFP36L2	Amp_13q12.13	0.792	1
CHUK	Del_10q21.1	0.792	1
ASXL1	Del_1p13.2	0.792	1
IFT57	21q-Del	0.792	1
Amp_8p11.23	Del_15q15.2	0.792	1
TP53	ATXN3L	0.793	1
TP53	Amp_2q33.1	0.793	1
RBBP7	Del_15q15.2	0.793	1
HIST1H1T	Amp_8q12.1	0.793	1
1q-Amp	Del_18q12.2	0.793	1
Amp_20p11.21	Del_1p33	0.793	1
ZFP36L2	Del_1p13.2	0.794	1
TOP2B	Amp_8p11.23	0.794	1
SETD2	9p-Amp	0.794	1
CREBBP	Del_4p16.2	0.794	1
16p-Amp	Del_1p13.2	0.794	1
17q-Amp	Del_5q22.2	0.794	1
NF2	Del_3q26.31	0.795	1
PRKDC	Del_16q23.1	0.795	1
FBXW7	20p-Del	0.795	1
DIP2B	Del_6p25.3	0.795	1
DIP2B	Del_6q26	0.795	1
DIP2B	Del_19p13.3	0.795	1
RB1	Del_4q35.1	0.795	1
TOP2B	9p-Amp	0.795	1
LARP4B	Del_6q26	0.795	1
SETD2	Amp_8p11.23	0.795	1
PTGDR	Del_1p36.11	0.795	1
CTNNB1	17p-Del	0.795	1
9p-Amp	Del_6q26	0.795	1
9p-Amp	Del_19p13.3	0.795	1
FAM123B	VCX2	0.796	1
ATXN3L	Amp_17q24.1	0.796	1
ERBB2	5q-Del	0.796	1
ERBB2	Amp_2q33.1	0.796	1
ERBB2	Amp_19p13.2	0.796	1
PTEN	Del_16p13.3	0.796	1
NEXN	Amp_1q31.1	0.796	1
NEXN	Amp_17q24.1	0.796	1
1q-Amp	21q-Del	0.796	1
22q-Del	Amp_8p11.21	0.796	1
5q-Del	Amp_1q31.1	0.796	1
5q-Del	Amp_17q24.1	0.796	1
Amp_17q24.1	Amp_19p13.2	0.796	1
ZFP36L2	Amp_20q12	0.797	1
MLH1	Del_5q21.2	0.797	1
NF2	22q-Del	0.797	1
RLIM	4q-Del	0.797	1
BMPR2	8q-Amp	0.797	1
12p-Amp	Del_18q21.2	0.797	1
BCOR	Del_4q35.1	0.798	1
THOC7	18q-Del	0.798	1
TPRKB	Del_8p22	0.798	1
ALG12	20p-Amp	0.798	1
VCX2	Amp_13q22.1	0.798	1
C14orf184	20p-Amp	0.798	1
ATM	Del_8p22	0.798	1
2p-Amp	Del_18q12.2	0.798	1
8p-Amp	Del_10q23.31	0.798	1
Amp_11p15.5	Amp_12p13.32	0.798	1
Amp_13q12.13	Del_2p12	0.798	1
ARID1A	Del_4q22.1	0.799	1
FAM123B	Del_3p26.3	0.799	1
SELPLG	Del_21q11.2	0.799	1
BCL9	13q-Amp	0.799	1
BCL9	Del_16q23.1	0.799	1
PTCH1	Amp_17q24.1	0.799	1
NLRC4	Del_16q23.1	0.799	1
SLC26A8	Del_21q11.2	0.799	1
L1TD1	Del_21q11.2	0.799	1
KDM6A	Amp_16p11.2	0.799	1
RPTN	Del_14q11.2	0.8	1
ASXL1	Del_4q35.1	0.8	1
RBBP7	Del_14q11.2	0.8	1
RBBP7	Del_15q21.1	0.8	1
RB1	Del_16p13.3	0.8	1
PRPS1	Del_15q15.2	0.8	1
C2orf29	Del_18p11.31	0.801	1
BMPR2	Amp_8p11.21	0.801	1
Amp_20p11.21	Del_22q13.32	0.801	1
SMAD2	FMN2	0.802	1
FMN2	17q-Amp	0.802	1
RPTN	12p-Amp	0.802	1
MGA	16p-Amp	0.802	1
ASXL1	Del_14q11.2	0.802	1
VCX2	Amp_12p13.32	0.802	1
RBBP7	12p-Amp	0.802	1
IDH1	Del_10q25.2	0.802	1
CTNNB1	15q-Del	0.802	1
Amp_17q12	Del_15q21.1	0.802	1
CHUK	20p-Del	0.803	1
CDK12	Del_3p26.3	0.803	1
CREBBP	Amp_19p13.2	0.803	1
12p-Amp	20p-Del	0.803	1
2q-Amp	8p-Del	0.803	1
Amp_2q33.1	Del_15q22.33	0.803	1
FAM123B	Amp_8p11.23	0.804	1
STARD3NL	Amp_13q12.2	0.804	1
ATXN3L	13q-Amp	0.804	1
PCBP1	Amp_13q12.2	0.804	1
PIK3R1	15q-Del	0.804	1
FYN	Amp_13q12.2	0.804	1
PRPS1	Del_15q21.1	0.804	1
SOX9	RLIM	0.805	1
ALPK2	Del_17q24.3	0.805	1
ASXL1	Del_17q24.3	0.805	1
RBPJ	Amp_17q12	0.805	1
SLC12A6	Del_5q21.2	0.805	1
GMPS	Amp_17q12	0.805	1
CTNNB1	Del_15q21.1	0.805	1
Amp_2q33.1	Del_1p33	0.805	1
APC	20p-Del	0.806	1
CRIPAK	Amp_8p11.21	0.806	1
ZFP36L2	Del_14q31.1	0.806	1
BCOR	Amp_8p11.21	0.806	1
SELPLG	Del_10q23.31	0.806	1
PRKDC	8p-Del	0.806	1
CHUK	20p-Amp	0.806	1
ASXL1	Del_5q12.1	0.806	1
C2orf29	Del_10q23.31	0.806	1
RBBP7	Amp_8p11.23	0.806	1
RBBP7	Del_14q31.1	0.806	1
TOP2B	Del_10q21.1	0.806	1
Amp_13q12.13	Del_7q31.1	0.806	1
CDH1	Del_22q13.32	0.807	1
MLH1	4p-Del	0.807	1
MLH1	Del_3p14.2	0.807	1
BCOR	Del_15q22.33	0.807	1
FMN2	18p-Del	0.807	1
CHUK	Amp_12p13.32	0.807	1
ST3GAL6	Del_5q22.2	0.807	1
PLEKHF2	Del_5q22.2	0.807	1
1q-Amp	Del_18p11.31	0.807	1
Amp_12p13.32	Del_3p26.3	0.807	1
TXNDC2	17p-Del	0.808	1
STARD3NL	Amp_13q22.1	0.808	1
PRKDC	Del_5q22.2	0.808	1
PCBP1	Amp_13q22.1	0.808	1
BMPR2	Amp_5q22.3	0.808	1
BMPR2	Del_12p13.1	0.808	1
FYN	Amp_13q22.1	0.808	1
PRPS1	Del_14q31.1	0.808	1
TP53	EGR1	0.809	1
STARD3NL	FBXW7	0.809	1
FAM9A	Amp_8q24.21	0.809	1
FBXW7	FYN	0.809	1
ERBB2	14q-Del	0.809	1
DIP2B	1q-Amp	0.809	1
DCLK2	Amp_8q12.1	0.809	1
PTEN	Del_10q21.1	0.809	1
LARP4B	1q-Amp	0.809	1
GPATCH8	Amp_8q12.1	0.809	1
NEXN	Amp_13q12.13	0.809	1
HIST1H1T	Amp_20q11.21	0.809	1
1q-Amp	9p-Amp	0.809	1
20p-Amp	5q-Del	0.809	1
20p-Amp	Del_3q26.31	0.809	1
20q-Amp	Amp_10q22.3	0.809	1
14q-Del	Amp_1q31.1	0.809	1
CRIPAK	BCL9	0.81	1
CRIPAK	BCORL1	0.81	1
ZFP36L2	4p-Del	0.81	1
SMAD2	Del_4q22.1	0.81	1
PRRG1	Del_4p16.2	0.81	1
RBBP7	4p-Del	0.81	1
RB1	2q-Amp	0.81	1
RB1	Amp_13q22.1	0.81	1
HLA-A	4p-Del	0.81	1
ATM	Del_1p36.11	0.81	1
Amp_10q22.3	Del_5q21.2	0.81	1
OR4D10	8q-Amp	0.811	1
NF2	Del_4q22.1	0.811	1
DIP2B	8q-Amp	0.811	1
LARP4B	8q-Amp	0.811	1
GMPS	8q-Amp	0.811	1
KDM6A	Del_16q23.1	0.811	1
Amp_16p11.2	Del_16q23.1	0.811	1
APC	ZNF486	0.812	1
RNF43	OR4D10	0.812	1
NF2	THOC7	0.812	1
RPTN	Del_15q11.2	0.812	1
THOC7	Del_4q35.1	0.812	1
FBXW7	Del_6p25.3	0.812	1
ERBB2	MAP4K3	0.812	1
ROS1	Del_4q35.1	0.812	1
IDH1	Amp_17q24.1	0.812	1
8p-Amp	Del_16q23.1	0.812	1
TXNDC2	Del_18q22.1	0.813	1
PLEKHF2	15q-Del	0.813	1
ASXL1	Amp_8p11.23	0.813	1
RLIM	Amp_11p15.5	0.813	1
RLIM	Del_1p13.2	0.813	1
MPHOSPH10	Amp_11p15.5	0.813	1
C14orf184	Del_8p22	0.813	1
PRPS1	Del_15q11.2	0.813	1
2q-Amp	Del_8p22	0.813	1
1p-Del	Amp_11p15.5	0.813	1
SELPLG	4q-Del	0.814	1
FAM9A	7p-Amp	0.814	1
RPTN	20p-Amp	0.814	1
BCL9	21q-Del	0.814	1
BCL9	22q-Del	0.814	1
ZBTB20	Amp_8q24.21	0.814	1
NLRC4	22q-Del	0.814	1
C2orf29	4q-Del	0.814	1
BCORL1	21q-Del	0.814	1
BCORL1	22q-Del	0.814	1
MAP4K3	Amp_8q24.21	0.814	1
SLC12A6	21q-Del	0.814	1
SLC12A6	22q-Del	0.814	1
IDH1	Amp_8q24.21	0.814	1
20p-Amp	Del_8q11.1	0.814	1
20p-Del	Del_3p14.2	0.814	1
RNF43	9p-Amp	0.815	1
FMN2	13q-Amp	0.815	1
CHUK	Del_5q22.2	0.815	1
Amp_8p11.21	Del_6q26	0.815	1
Del_3p26.3	Del_5q22.2	0.815	1
CRIPAK	18q-Del	0.816	1
TP53	WNT1	0.816	1
TP53	ALG12	0.816	1
MGA	Amp_8q24.21	0.816	1
ROS1	Amp_8p11.21	0.816	1
RBPJ	7p-Amp	0.816	1
RB1	Del_4q22.1	0.816	1
TOP2B	20p-Del	0.816	1
PTEN	2q-Amp	0.816	1
CDK12	Del_6p25.3	0.816	1
BIRC3	22q-Del	0.816	1
20p-Del	Del_6p25.3	0.816	1
20p-Del	Del_19p13.3	0.816	1
Amp_8p11.23	Del_4p16.2	0.816	1
CDH1	4p-Del	0.817	1
BCL9	Del_1p36.11	0.817	1
GRB2	Del_15q22.33	0.817	1
RSPH3	Del_8p23.2	0.817	1
SMAD4	Del_1p33	0.817	1
PTEN	Del_1p33	0.817	1
SETD2	16p-Amp	0.817	1
SETD2	Del_8q11.1	0.817	1
APC	SMAD2	0.818	1
TP53	LARP4B	0.818	1
ST3GAL6	Del_4q22.1	0.818	1
PLEKHF2	Del_4q22.1	0.818	1
RB1	8p-Del	0.818	1
FAM123B	Del_19p13.3	0.819	1
ALPK2	Del_3p14.2	0.819	1
ASXL1	4p-Del	0.819	1
ASXL1	Del_3p14.2	0.819	1
C14orf184	Del_18p11.31	0.819	1
17p-Del	Del_16q23.1	0.819	1
4p-Del	Amp_17q12	0.819	1
Amp_20q13.31	Del_6p25.3	0.819	1
IQCD	Amp_8p11.21	0.82	1
PRRG1	8p-Del	0.82	1
RLIM	Del_15q15.2	0.82	1
SMAD4	Del_4q22.1	0.82	1
BMPR2	Del_1p13.2	0.82	1
7p-Amp	Del_10q23.31	0.82	1
15q-Del	Amp_11p15.5	0.82	1
THOC7	Del_22q13.32	0.821	1
MGA	1p-Del	0.821	1
ZBTB20	Del_1p33	0.821	1
PTCH1	Del_1p33	0.821	1
PCBP1	CTNNB1	0.821	1
FYN	CTNNB1	0.821	1
BCORL1	9p-Amp	0.821	1
BCORL1	Del_17q24.3	0.821	1
SLC12A6	9p-Amp	0.821	1
CRIPAK	ACVR1B	0.822	1
CRIPAK	Amp_16p11.2	0.822	1
TP53	ALPK2	0.822	1
FAM123B	IFT57	0.822	1
SOX9	SELPLG	0.822	1
SOX9	ALDH1A3	0.822	1
ALPK2	Del_22q13.32	0.822	1
ASXL1	Del_22q13.32	0.822	1
ROS1	Amp_10q22.3	0.822	1
SMAD4	13q-Amp	0.822	1
BMPR2	Amp_6p21.1	0.822	1
NEXN	Del_10q23.31	0.822	1
Amp_2q33.1	Del_10q23.31	0.822	1
Del_3q26.31	Del_10q23.31	0.822	1
Del_16q23.1	Del_18q12.2	0.822	1
CDH1	Del_6p25.3	0.823	1
FMN2	Del_3p26.3	0.823	1
CHUK	15q-Del	0.823	1
ASXL1	Del_8p22	0.823	1
KDM6A	Del_5q21.2	0.823	1
Amp_10q22.3	Amp_20q11.21	0.823	1
FAM123B	22q-Del	0.824	1
ZFP36L2	ASXL1	0.824	1
ERBB2	4q-Del	0.824	1
ALPK2	16p-Amp	0.824	1
ALPK2	Del_8q11.1	0.824	1
ASXL1	Del_8q11.1	0.824	1
PIK3R1	Del_17p12	0.824	1
ROS1	Del_15q22.33	0.824	1
MPHOSPH10	Amp_8q24.21	0.824	1
1p-Del	Amp_8q24.21	0.824	1
22q-Del	Amp_20p11.21	0.824	1
4q-Del	Amp_17q24.1	0.824	1
FBXW7	21q-Del	0.825	1
BMPR2	Amp_8q24.21	0.825	1
IDH1	Del_15q22.33	0.825	1
12p-Amp	Del_5q22.2	0.825	1
APC	Amp_1q31.1	0.826	1
SMAD2	Amp_1q31.1	0.826	1
SMAD2	Amp_17q24.1	0.826	1
FBXW7	Amp_19p13.2	0.826	1
ERBB2	Amp_5q22.3	0.826	1
RLIM	Del_15q21.1	0.826	1
FAM123B	7q-Amp	0.827	1
ZFP36L2	Amp_20q13.31	0.827	1
WNT1	Amp_8p11.21	0.827	1
IFT57	Amp_12p13.32	0.827	1
ZNF486	Amp_12p13.32	0.827	1
CRIPAK	8p-Amp	0.828	1
FBXW7	8p-Amp	0.828	1
RLIM	4p-Del	0.828	1
SMAD4	GMNN	0.828	1
SMAD4	Amp_13q22.1	0.828	1
SLC12A6	8q-Amp	0.828	1
ATM	Del_3q26.31	0.828	1
CDH1	16p-Amp	0.829	1
SELPLG	Amp_8p11.21	0.829	1
THOC7	Del_18q12.2	0.829	1
GRB2	Del_18q12.2	0.829	1
PLAGL2	7p-Amp	0.829	1
RB1	Amp_2q33.1	0.829	1
FKBP9	Amp_8p11.21	0.829	1
4p-Del	Amp_12p13.32	0.829	1
RNF43	Del_3p14.2	0.83	1
TXNDC2	Del_18q21.2	0.83	1
STARD3NL	Amp_13q12.13	0.83	1
RBPJ	Amp_20q11.21	0.83	1
L1TD1	Amp_11p15.5	0.83	1
L1TD1	Del_1p13.2	0.83	1
FKBP9	Del_1p13.2	0.83	1
FYN	Amp_13q12.13	0.83	1
ALDH1A3	Del_1p13.2	0.83	1
1q-Amp	Del_17p12	0.83	1
20q-Amp	Del_3q26.31	0.83	1
8q-Amp	Del_14q11.2	0.83	1
Amp_11p15.5	Del_16p13.3	0.83	1
CRIPAK	Del_21q11.2	0.831	1
RNF43	Del_8q11.1	0.831	1
TP53	MGA	0.831	1
ACVR1B	22q-Del	0.831	1
STARD3NL	Del_5q21.2	0.831	1
FAM9A	14q-Del	0.831	1
BCL9	Del_10q21.1	0.831	1
P2RY13	Del_4p16.2	0.831	1
NR1H3	Del_4p16.2	0.831	1
PTCH1	Del_5q12.1	0.831	1
GRB2	Del_21q11.2	0.831	1
NLRC4	Del_10q21.1	0.831	1
PIK3R1	Del_4p16.2	0.831	1
RSPH3	14q-Del	0.831	1
RSPH3	Del_21q11.2	0.831	1
DCLK2	Del_4p16.2	0.831	1
BMPR2	12p-Amp	0.831	1
FYN	Del_4p16.2	0.831	1
FYN	Del_5q21.2	0.831	1
LARP4B	Amp_8p11.21	0.831	1
BCORL1	Del_10q21.1	0.831	1
HIST1H1T	Amp_20q12	0.831	1
16q-Amp	Del_5q21.2	0.831	1
14q-Del	Del_2q22.1	0.831	1
21q-Del	Amp_16p11.2	0.831	1
B2M	8p-Amp	0.832	1
BCL9	Del_14q11.2	0.832	1
ERBB2	13q-Amp	0.832	1
RSPH3	13q-Amp	0.832	1
DDX26B	8p-Amp	0.832	1
BCORL1	Del_15q21.1	0.832	1
ARID1A	Del_15q15.2	0.833	1
ACVR1B	9p-Amp	0.833	1
ACVR1B	Del_17q24.3	0.833	1
DIP2B	Amp_16p11.2	0.833	1
IFT57	Del_5q22.2	0.833	1
PTEN	8p-Del	0.833	1
LARP4B	Amp_16p11.2	0.833	1
ZNF486	Del_5q22.2	0.833	1
KDM6A	Del_17q24.3	0.833	1
9p-Amp	Amp_16p11.2	0.833	1
CRIPAK	Del_16q23.1	0.834	1
BCOR	7q-Amp	0.834	1
FMN2	8q-Amp	0.834	1
MVK	SMAD4	0.834	1
ASXL1	20p-Del	0.834	1
TOP2B	Del_5q22.2	0.834	1
BCORL1	7p-Amp	0.834	1
20p-Del	Amp_17q12	0.834	1
Amp_8p11.23	Del_15q11.2	0.834	1
Del_5q22.2	Del_6q26	0.834	1
SOX9	Amp_1q31.1	0.835	1
SOX9	Amp_17q24.1	0.835	1
SMAD2	Del_1p33	0.835	1
FMN2	Del_5q12.1	0.835	1
Del_16q23.1	Del_17p12	0.835	1
APC	BCORL1	0.836	1
CRIPAK	Del_18q22.1	0.836	1
2p-Amp	Del_18q22.1	0.836	1
6p-Amp	Del_18q22.1	0.836	1
SOX9	Amp_20p11.21	0.837	1
ZFP36L2	Del_8p22	0.837	1
SELPLG	12p-Amp	0.837	1
SELPLG	Del_5q12.1	0.837	1
MAPK6	Del_5q12.1	0.837	1
RPTN	Del_8p22	0.837	1
THOC7	FBXW7	0.837	1
FBXW7	Del_2q22.1	0.837	1
P2RY13	22q-Del	0.837	1
NR1H3	21q-Del	0.837	1
NR1H3	22q-Del	0.837	1
PCBP1	21q-Del	0.837	1
RLIM	Amp_20q11.21	0.837	1
RLIM	Del_15q11.2	0.837	1
MPHOSPH10	Del_15q11.2	0.837	1
SLC26A8	Del_5q12.1	0.837	1
L1TD1	12p-Amp	0.837	1
DCLK2	21q-Del	0.837	1
DCLK2	22q-Del	0.837	1
FKBP9	12p-Amp	0.837	1
FYN	22q-Del	0.837	1
GPATCH8	21q-Del	0.837	1
HIST1H1T	Amp_20p11.21	0.837	1
16q-Amp	21q-Del	0.837	1
SOX9	Del_3q26.31	0.838	1
SMAD2	NF2	0.838	1
STARD3NL	Amp_8q24.21	0.838	1
SELPLG	Del_1p36.11	0.838	1
NF2	Amp_5q22.3	0.838	1
NF2	Del_12p13.1	0.838	1
RHOA	15q-Del	0.838	1
ST3GAL6	Del_4q35.1	0.838	1
IQCD	15q-Del	0.838	1
VCX2	Del_4q35.1	0.838	1
SLC26A8	Del_1p36.11	0.838	1
L1TD1	Del_1p36.11	0.838	1
DCLK2	Amp_8q24.21	0.838	1
Amp_16p11.2	Del_1p36.11	0.838	1
MLH1	Amp_10q22.3	0.839	1
BCL9	Amp_8p11.23	0.839	1
BCL9	Del_14q31.1	0.839	1
PTEN	5q-Del	0.839	1
BCORL1	Del_14q31.1	0.839	1
13q-Amp	Del_6q26	0.839	1
Amp_13q22.1	Del_6p25.3	0.839	1
Del_3p14.2	Del_5q22.2	0.839	1
OR4D10	Amp_20p11.21	0.84	1
ERBB2	Amp_6p21.1	0.84	1
ERBB2	Del_3p26.3	0.84	1
C11orf30	Amp_17q24.1	0.84	1
DIP2B	20p-Amp	0.84	1
RBPJ	7q-Amp	0.84	1
GMPS	Amp_20p11.21	0.84	1
17p-Del	Amp_1q31.1	0.84	1
APC	Amp_12p13.32	0.841	1
TP53	SELPLG	0.841	1
TP53	ALDH1A3	0.841	1
TP53	CDK12	0.841	1
FMN2	Del_6p25.3	0.841	1
PRKDC	Del_10q23.31	0.841	1
HIST1H1T	Amp_8p11.23	0.841	1
1q-Amp	17p-Del	0.841	1
ALPK2	1p-Del	0.842	1
ALPK2	Del_21q11.2	0.842	1
ASXL1	1p-Del	0.842	1
ASXL1	Del_21q11.2	0.842	1
PTCH1	Del_15q11.2	0.842	1
PIK3R1	9p-Amp	0.842	1
PIK3R1	21q-Del	0.842	1
PTEN	Del_8q11.1	0.842	1
8p-Amp	21q-Del	0.842	1
APC	2p-Amp	0.843	1
ZFP36L2	18q-Del	0.843	1
RPTN	18q-Del	0.843	1
MGA	Del_10q25.2	0.843	1
PLEKHF2	Del_15q22.33	0.843	1
ASXL1	Amp_17q12	0.843	1
ROS1	16q-Amp	0.843	1
FKBP9	Del_15q15.2	0.843	1
PTEN	20p-Del	0.843	1
MAP4K3	8p-Del	0.843	1
ZNF486	Del_4q22.1	0.843	1
CREBBP	Del_10q21.1	0.843	1
20q-Amp	Del_6p25.3	0.843	1
Amp_16p11.2	Del_10q21.1	0.843	1
Del_15q15.2	Del_16p13.3	0.843	1
FAM123B	MVK	0.844	1
TXNDC2	Del_10q25.2	0.844	1
CDH1	20p-Del	0.844	1
SELPLG	Del_3p14.2	0.844	1
MAPK6	Del_3p14.2	0.844	1
ATXN3L	Amp_20q11.21	0.844	1
TOP2B	20p-Amp	0.844	1
TOP2B	Del_10q25.2	0.844	1
FKBP9	4p-Del	0.844	1
ALDH1A3	Del_3p14.2	0.844	1
IDH1	13q-Amp	0.844	1
IDH1	Del_21q11.2	0.844	1
2p-Amp	8p-Del	0.844	1
6p-Amp	8p-Del	0.844	1
Del_3q26.31	Del_18p11.31	0.844	1
SMAD2	Del_15q22.33	0.845	1
FMN2	Del_5q21.2	0.845	1
MGA	Del_4q22.1	0.845	1
TPRKB	Del_15q11.2	0.845	1
BCL9	Del_15q11.2	0.845	1
ALG12	Amp_20p11.21	0.845	1
RBBP7	8q-Amp	0.845	1
RB1	Amp_8p11.21	0.845	1
BCORL1	Del_15q11.2	0.845	1
CREBBP	Amp_5q22.3	0.845	1
CTNNB1	Del_4p16.2	0.845	1
2p-Amp	Del_18q21.2	0.845	1
6p-Amp	Del_18q21.2	0.845	1
Amp_11p15.5	Del_15q15.2	0.845	1
Amp_16p11.2	Del_15q15.2	0.845	1
Amp_17q24.1	Del_1p13.2	0.845	1
ZFP36L2	Del_18p11.31	0.846	1
CDH1	Del_10q23.31	0.846	1
FMN2	14q-Del	0.846	1
GGT1	SMAD4	0.846	1
NF2	8q-Amp	0.846	1
ERBB2	Amp_8p11.21	0.846	1
P2RY13	Del_8p23.2	0.846	1
NR1H3	Del_8p23.2	0.846	1
DCLK2	Del_8p23.2	0.846	1
PTEN	Del_10q25.2	0.846	1
1q-Amp	18p-Del	0.846	1
TPRKB	Amp_13q12.2	0.847	1
PIK3R1	18p-Del	0.847	1
8q-Amp	Del_14q31.1	0.847	1
ARID1A	1p-Del	0.848	1
SMAD2	8q-Amp	0.848	1
EGR1	8q-Amp	0.848	1
IFT57	Amp_13q12.2	0.848	1
TOP2B	Del_4q22.1	0.848	1
CREBBP	4q-Del	0.848	1
MVK	Amp_12p13.32	0.849	1
SLC26A8	Del_15q21.1	0.849	1
FKBP9	Del_15q21.1	0.849	1
BIRC3	Amp_12p13.32	0.849	1
IDH1	20p-Amp	0.849	1
Del_15q21.1	Del_16p13.3	0.849	1
APC	EGR1	0.85	1
RPTN	8p-Amp	0.85	1
PTCH1	4p-Del	0.85	1
PTCH1	Amp_16p11.2	0.85	1
RBPJ	Del_4p16.2	0.85	1
RBPJ	Del_5q21.2	0.85	1
BIRC3	Del_18p11.31	0.85	1
Amp_10q22.3	Del_18p11.31	0.85	1
CRIPAK	Amp_13q12.13	0.851	1
PRKDC	Amp_5q22.3	0.851	1
ERBB2	Amp_20p11.21	0.851	1
RB1	2p-Amp	0.851	1
HIST1H1T	Amp_20q13.31	0.851	1
13q-Amp	1p-Del	0.851	1
17q-Amp	Del_10q23.31	0.851	1
7q-Amp	Del_7q31.1	0.851	1
Amp_5q22.3	Del_10q23.31	0.851	1
Amp_16p11.2	Del_15q21.1	0.851	1
SOX9	ZBTB20	0.852	1
SOX9	MAP4K3	0.852	1
ACVR1B	20p-Del	0.852	1
FMN2	Amp_13q12.2	0.852	1
EGR1	7p-Amp	0.852	1
ATXN3L	12p-Amp	0.852	1
MGA	5q-Del	0.852	1
MGA	Amp_19p13.2	0.852	1
ST3GAL6	7p-Amp	0.852	1
IFT57	Amp_13q22.1	0.852	1
SETD2	Del_5q22.2	0.852	1
NEXN	12p-Amp	0.852	1
NEXN	Del_5q12.1	0.852	1
KDM6A	20p-Del	0.852	1
12p-Amp	Del_3q26.31	0.852	1
20p-Del	Amp_16p11.2	0.852	1
Amp_2q33.1	Del_5q12.1	0.852	1
ACVR1B	8q-Amp	0.853	1
CDH1	Amp_8q12.1	0.853	1
BCOR	Del_4p16.2	0.853	1
SMAD2	7p-Amp	0.853	1
THOC7	Del_8p22	0.853	1
ERBB2	Del_6p25.3	0.853	1
ERBB2	Del_19p13.3	0.853	1
RSPH3	Del_8p22	0.853	1
CRIPAK	9p-Amp	0.854	1
PIK3R1	Del_8p22	0.854	1
FKBP9	Amp_8p11.23	0.854	1
BIRC3	Del_5q22.2	0.854	1
8p-Amp	Del_8p22	0.854	1
Amp_8q12.1	Del_14q31.1	0.854	1
Amp_10q22.3	Del_5q22.2	0.854	1
Amp_11p15.5	Del_15q21.1	0.854	1
NF1	5q-Del	0.855	1
NF1	Amp_19p13.2	0.855	1
MGA	Amp_17q24.1	0.855	1
PTCH1	PCBP1	0.855	1
RBPJ	Amp_20q12	0.855	1
PTEN	4p-Del	0.855	1
NEXN	Amp_8p11.21	0.855	1
CTNNB1	Amp_8q24.21	0.855	1
Amp_1q31.1	Del_18q12.2	0.855	1
Amp_8p11.21	Del_3q26.31	0.855	1
Amp_17q24.1	Del_5q12.1	0.855	1
Del_3q26.31	Del_18q21.2	0.855	1
CDH1	Del_4p16.2	0.856	1
OR4D10	22q-Del	0.856	1
FBXW7	9p-Amp	0.856	1
PLEKHF2	14q-Del	0.856	1
GRB2	Del_1p36.11	0.856	1
DIP2B	Amp_8q12.1	0.856	1
PIK3R1	Del_10q21.1	0.856	1
RSPH3	Del_1p36.11	0.856	1
DDX26B	22q-Del	0.856	1
RBPJ	21q-Del	0.856	1
RBPJ	22q-Del	0.856	1
RB1	Amp_13q12.2	0.856	1
CTNNB1	Del_3p26.3	0.856	1
1q-Amp	18q-Del	0.856	1
Del_1p36.11	Del_16q23.1	0.856	1
FMN2	22q-Del	0.857	1
FBXW7	Del_15q22.33	0.857	1
CHUK	Del_4q35.1	0.857	1
ACVR1B	Amp_8p11.23	0.858	1
SMAD2	4q-Del	0.858	1
ASXL1	Del_16p13.3	0.858	1
SLC26A8	Amp_17q12	0.858	1
L1TD1	Amp_17q12	0.858	1
17q-Amp	4q-Del	0.858	1
Amp_20q11.21	Del_6p25.3	0.858	1
FAM123B	Del_1p33	0.859	1
ACVR1B	7p-Amp	0.859	1
NF2	8p-Del	0.859	1
ATXN3L	Del_1p36.11	0.859	1
NR1H3	RB1	0.859	1
GRB2	Del_18p11.31	0.859	1
PRRG1	15q-Del	0.859	1
PCBP1	RB1	0.859	1
RSPH3	Del_18p11.31	0.859	1
RB1	16q-Amp	0.859	1
NEXN	4p-Del	0.859	1
NEXN	Del_1p36.11	0.859	1
NEXN	Del_3p14.2	0.859	1
BIRC3	15q-Del	0.859	1
IDH1	Amp_11p15.5	0.859	1
4p-Del	Amp_2q33.1	0.859	1
Amp_2q33.1	Del_1p36.11	0.859	1
MLH1	Amp_20p11.21	0.86	1
FAM9A	Del_15q15.2	0.86	1
NLRC4	Amp_12p13.32	0.86	1
SMAD4	Amp_6p21.1	0.86	1
FKBP9	Del_15q11.2	0.86	1
CDK12	Amp_8q24.21	0.86	1
Amp_8p11.21	Amp_11p15.5	0.86	1
Amp_8p11.21	Del_1p13.2	0.86	1
CRIPAK	Del_18q12.2	0.861	1
TXNDC2	Del_1p33	0.861	1
IQCD	Del_4q35.1	0.861	1
RLIM	17p-Del	0.861	1
TOP2B	Del_1p33	0.861	1
BIRC3	17p-Del	0.861	1
21q-Del	Amp_8q24.21	0.861	1
ZFP36L2	Del_17p12	0.862	1
CDH1	4q-Del	0.862	1
ATXN3L	Del_17p12	0.862	1
PCBP1	13q-Amp	0.862	1
ROS1	4q-Del	0.862	1
C2orf29	Amp_8q24.21	0.862	1
C2orf29	Amp_13q22.1	0.862	1
SLC26A8	Amp_8q24.21	0.862	1
CTNNB1	Amp_1q31.1	0.862	1
CTNNB1	Amp_17q24.1	0.862	1
8p-Amp	Del_3p14.2	0.862	1
Amp_8p11.23	Amp_11p15.5	0.862	1
Amp_17q24.1	Del_5q22.2	0.862	1
TP53	GMPS	0.863	1
SMAD2	Del_21q11.2	0.863	1
FMN2	17p-Del	0.863	1
CHUK	Del_15q22.33	0.863	1
SMAD4	21q-Del	0.863	1
CREBBP	Amp_6p21.1	0.863	1
CREBBP	Del_3p26.3	0.863	1
20p-Del	Del_16q23.1	0.863	1
CRIPAK	Del_10q21.1	0.864	1
RNF43	SELPLG	0.864	1
FAM9A	Del_14q11.2	0.864	1
FAM9A	Del_15q21.1	0.864	1
RPTN	7q-Amp	0.864	1
NF1	Amp_13q22.1	0.864	1
PLEKHF2	Del_8p23.2	0.864	1
ALPK2	Del_5q22.2	0.864	1
DIP2B	Del_17q24.3	0.864	1
PRRG1	Del_4q22.1	0.864	1
RSPH3	Del_14q11.2	0.864	1
9p-Amp	Del_17q24.3	0.864	1
Amp_6p21.1	Del_10q23.31	0.864	1
Amp_16p11.2	Del_15q11.2	0.864	1
Del_2q22.1	Del_14q11.2	0.864	1
FAM123B	Del_4q35.1	0.865	1
STARD3NL	20p-Amp	0.865	1
TPRKB	Amp_13q12.13	0.865	1
DCLK2	20p-Amp	0.865	1
8p-Amp	Del_15q21.1	0.865	1
CRIPAK	Amp_8q24.21	0.866	1
SOX9	SMAD2	0.866	1
SOX9	17q-Amp	0.866	1
SOX9	Del_12p13.1	0.866	1
RHOA	CREBBP	0.866	1
RHOA	Del_15q22.33	0.866	1
ZBTB20	Del_5q12.1	0.866	1
IQCD	Del_15q22.33	0.866	1
TOP2B	7q-Amp	0.866	1
SETD2	5q-Del	0.866	1
SETD2	Amp_2q33.1	0.866	1
9p-Amp	Del_4p16.2	0.866	1
8p-Del	Del_12p13.1	0.866	1
BCL9	Del_5q22.2	0.867	1
ERBB2	Del_15q15.2	0.867	1
NLRC4	Amp_8q12.1	0.867	1
NLRC4	Del_10q25.2	0.867	1
RB1	Del_10q23.31	0.867	1
HLA-A	Del_4p16.2	0.867	1
SLC12A6	Amp_8q12.1	0.867	1
SLC12A6	Del_5q22.2	0.867	1
CTNNB1	Del_17q24.3	0.867	1
16p-Amp	Del_5q21.2	0.867	1
Amp_1q31.1	Del_15q15.2	0.867	1
APC	BMPR2	0.868	1
TP53	SLC12A6	0.868	1
FAM123B	ACVR1B	0.868	1
FAM9A	Amp_8p11.23	0.868	1
FAM9A	Del_14q31.1	0.868	1
TPRKB	17p-Del	0.868	1
RSPH3	Amp_8p11.23	0.868	1
SETD2	Amp_8q24.21	0.868	1
Amp_11p15.5	Del_4p16.2	0.868	1
Amp_11p15.5	Del_5q21.2	0.868	1
TP53	GRB2	0.869	1
PRKDC	Del_3p26.3	0.869	1
PCBP1	Amp_12p13.32	0.869	1
IFT57	Amp_13q12.13	0.869	1
SMAD4	FYN	0.869	1
GPATCH8	Amp_12p13.32	0.869	1
Amp_12p13.32	Del_17p12	0.869	1
ACVR1B	BMPR2	0.87	1
WNT1	8q-Amp	0.87	1
MAPK6	Del_8p23.2	0.87	1
IQCD	Del_22q13.32	0.87	1
ASXL1	Del_10q25.2	0.87	1
SMAD4	Del_5q12.1	0.87	1
15q-Del	Amp_17q24.1	0.87	1
Amp_8p11.21	Del_4p16.2	0.87	1
ARID1A	Del_15q11.2	0.871	1
CDH1	8p-Del	0.871	1
CHUK	4q-Del	0.871	1
PTCH1	Amp_5q22.3	0.871	1
RSPH3	Del_17p12	0.871	1
2p-Amp	Del_8p22	0.871	1
CRIPAK	20p-Del	0.872	1
BCOR	20p-Del	0.872	1
SMAD2	Del_1p13.2	0.872	1
FAM9A	Del_15q11.2	0.872	1
ALPK2	Amp_19p13.2	0.872	1
ASXL1	Amp_2q33.1	0.872	1
PCBP1	18q-Del	0.872	1
WNT1	7p-Amp	0.873	1
NF2	Del_6p25.3	0.873	1
RPTN	22q-Del	0.873	1
PLEKHF2	Amp_8q12.1	0.873	1
ALG12	7p-Amp	0.873	1
PTCH1	8p-Del	0.873	1
NLRC4	15q-Del	0.873	1
PCBP1	Del_5q22.2	0.873	1
RLIM	8q-Amp	0.873	1
RBBP7	21q-Del	0.873	1
HLA-A	21q-Del	0.873	1
LARP4B	Del_10q21.1	0.873	1
MAP4K3	4p-Del	0.873	1
SETD2	Amp_1q31.1	0.873	1
CDK12	Amp_8p11.21	0.873	1
IDH1	4p-Del	0.873	1
CTNNB1	16p-Amp	0.873	1
12p-Amp	18q-Del	0.873	1
16p-Amp	21q-Del	0.873	1
16q-Amp	Del_5q22.2	0.873	1
8q-Amp	1p-Del	0.873	1
Amp_8q12.1	Del_22q13.32	0.873	1
Amp_8q24.21	Del_14q11.2	0.873	1
OR4D10	Del_18q22.1	0.874	1
RHOA	20q-Amp	0.874	1
ATXN3L	18p-Del	0.874	1
ATXN3L	Amp_8p11.23	0.874	1
ERBB2	Amp_13q22.1	0.874	1
ERBB2	Del_15q21.1	0.874	1
PTCH1	15q-Del	0.874	1
PIK3R1	Amp_8p11.23	0.874	1
PIK3R1	Del_14q31.1	0.874	1
RBBP7	Amp_8q12.1	0.874	1
NEXN	Amp_8p11.23	0.874	1
9p-Amp	22q-Del	0.874	1
18p-Del	Del_3q26.31	0.874	1
Amp_1q31.1	Del_15q21.1	0.874	1
RPTN	Del_18q12.2	0.875	1
BCL9	Amp_1q31.1	0.875	1
ERBB2	BCORL1	0.875	1
PCBP1	20q-Amp	0.875	1
SMAD4	Del_18q12.2	0.875	1
DCLK2	20q-Amp	0.875	1
BCORL1	Amp_1q31.1	0.875	1
SLC12A6	Amp_1q31.1	0.875	1
CREBBP	Del_1p13.2	0.875	1
CTNNB1	Del_5q12.1	0.875	1
KDM6A	Amp_12p13.32	0.875	1
Amp_8p11.23	Del_16q23.1	0.875	1
CRIPAK	Del_8p23.2	0.876	1
RB1	17q-Amp	0.876	1
6p-Amp	Del_18p11.31	0.876	1
Amp_8p11.23	Del_21q11.2	0.876	1
ZFP36L2	20q-Amp	0.877	1
ACVR1B	Del_10q25.2	0.877	1
CDH1	Amp_13q12.2	0.877	1
PTEN	Del_1p13.2	0.877	1
MAP4K3	Del_1p36.11	0.877	1
IDH1	Del_1p36.11	0.877	1
Amp_13q12.2	Del_16q23.1	0.877	1
Amp_16p11.2	Del_10q25.2	0.877	1
APC	12p-Amp	0.878	1
ARID1A	THOC7	0.878	1
ARID1A	Del_2q22.1	0.878	1
RNF43	Del_3q26.31	0.878	1
SOX9	Del_3p26.3	0.878	1
RHOA	14q-Del	0.878	1
FBXW7	Del_5q22.2	0.878	1
PCBP1	15q-Del	0.878	1
ROS1	Del_4q22.1	0.878	1
DCLK2	15q-Del	0.878	1
FYN	15q-Del	0.878	1
ZNF486	14q-Del	0.878	1
CRIPAK	Del_15q15.2	0.879	1
MLH1	Amp_20q12	0.879	1
SMAD2	Del_5q12.1	0.879	1
STARD3NL	Amp_8p11.21	0.879	1
NF2	12p-Amp	0.879	1
NF2	Del_1p36.11	0.879	1
NF2	Del_5q12.1	0.879	1
RHOA	8q-Amp	0.879	1
PRKDC	Amp_8p11.21	0.879	1
NF1	Del_14q11.2	0.879	1
MGA	17q-Amp	0.879	1
MGA	Amp_5q22.3	0.879	1
MGA	Del_5q21.2	0.879	1
MGA	Del_12p13.1	0.879	1
BCL9	Del_4q22.1	0.879	1
IQCD	8q-Amp	0.879	1
NR1H3	Amp_8p11.21	0.879	1
SMAD4	Del_2p12	0.879	1
CDK12	14q-Del	0.879	1
NEXN	Del_15q11.2	0.879	1
IDH1	Del_18p11.31	0.879	1
CREBBP	Del_6p25.3	0.879	1
CREBBP	Del_19p13.3	0.879	1
12p-Amp	Del_4p16.2	0.879	1
12p-Amp	Del_12p13.1	0.879	1
17q-Amp	Del_5q12.1	0.879	1
CDH1	Del_15q22.33	0.88	1
TPRKB	7q-Amp	0.88	1
ERBB2	Amp_8q24.21	0.88	1
ST3GAL6	20p-Amp	0.88	1
PLEKHF2	20p-Amp	0.88	1
C11orf30	Del_21q11.2	0.88	1
RSPH3	18p-Del	0.88	1
VCX2	Del_1p36.11	0.88	1
ACVR1B	Del_5q22.2	0.881	1
CDH1	Amp_16p11.2	0.881	1
CDH1	Del_15q11.2	0.881	1
SMAD2	Amp_8q12.1	0.881	1
MAPK6	8p-Amp	0.881	1
FBXW7	17q-Amp	0.881	1
ALPK2	Amp_1q31.1	0.881	1
ASXL1	Amp_1q31.1	0.881	1
DIP2B	20p-Del	0.881	1
C2orf29	8p-Amp	0.881	1
L1TD1	8p-Amp	0.881	1
FKBP9	8p-Amp	0.881	1
LARP4B	20p-Del	0.881	1
CDK12	9p-Amp	0.881	1
BIRC3	Del_4q35.1	0.881	1
7p-Amp	Amp_11p15.5	0.881	1
Amp_13q22.1	Del_16q23.1	0.881	1
Amp_16p11.2	Del_5q22.2	0.881	1
CDH1	Del_2q22.1	0.882	1
FMN2	Del_18p11.31	0.882	1
P2RY13	Del_4q22.1	0.882	1
PTCH1	Del_15q22.33	0.882	1
NLRC4	Del_1p33	0.882	1
NLRC4	Del_8p23.2	0.882	1
PIK3R1	Amp_17q12	0.882	1
DCLK2	Del_4q22.1	0.882	1
BCORL1	Del_1p33	0.882	1
SLC12A6	Del_1p33	0.882	1
NEXN	Amp_20p11.21	0.882	1
IDH1	Del_15q15.2	0.882	1
CTNNB1	Del_14q11.2	0.882	1
16q-Amp	Del_4q22.1	0.882	1
APC	Del_6q26	0.883	1
CRIPAK	8p-Del	0.883	1
RHOA	7p-Amp	0.883	1
P2RY13	Del_8p22	0.883	1
IQCD	7p-Amp	0.883	1
NR1H3	Del_8p22	0.883	1
ALG12	20q-Amp	0.883	1
GRB2	Amp_20q11.21	0.883	1
IFT57	7p-Amp	0.883	1
RLIM	Del_4p16.2	0.883	1
MPHOSPH10	Del_5q21.2	0.883	1
SMAD4	17p-Del	0.883	1
RB1	Del_7q31.1	0.883	1
DCLK2	Del_8p22	0.883	1
C14orf184	20q-Amp	0.883	1
ARID1A	Amp_11p15.5	0.884	1
ARID1A	Del_1p13.2	0.884	1
TXNDC2	Del_22q13.32	0.884	1
EGR1	Del_15q15.2	0.884	1
PRKDC	Del_6q26	0.884	1
CHUK	Amp_20p11.21	0.884	1
CHUK	Del_1p13.2	0.884	1
ST3GAL6	Del_15q15.2	0.884	1
PLEKHF2	Del_15q15.2	0.884	1
C11orf30	Amp_11p15.5	0.884	1
C11orf30	Del_1p13.2	0.884	1
ROS1	Del_4p16.2	0.884	1
PRPS1	Amp_20q11.21	0.884	1
Amp_11p15.5	Del_3p26.3	0.884	1
CRIPAK	Del_15q21.1	0.885	1
CDH1	Amp_13q22.1	0.885	1
MLH1	Amp_8p11.23	0.885	1
SMAD2	4p-Del	0.885	1
SMAD2	Del_3p14.2	0.885	1
PTCH1	Del_14q11.2	0.885	1
PRRG1	Del_15q22.33	0.885	1
PCBP1	Amp_20q11.21	0.885	1
ROS1	Amp_11p15.5	0.885	1
ROS1	Del_1p13.2	0.885	1
BIRC3	Del_15q22.33	0.885	1
KDM6A	Amp_17q24.1	0.885	1
Amp_20q12	Del_6p25.3	0.885	1
TP53	Del_16q23.1	0.886	1
THOC7	Amp_20p11.21	0.886	1
GRB2	Amp_20p11.21	0.886	1
PIK3R1	Del_18q21.2	0.886	1
RSPH3	Amp_20p11.21	0.886	1
C2orf29	13q-Amp	0.886	1
GMPS	Amp_12p13.32	0.886	1
18q-Del	Amp_1q31.1	0.886	1
CDH1	15q-Del	0.887	1
MLH1	4q-Del	0.887	1
WNT1	Amp_8q12.1	0.887	1
EGR1	Del_15q21.1	0.887	1
ZBTB20	Del_15q21.1	0.887	1
ERBB2	Del_15q11.2	0.887	1
PLEKHF2	Del_14q11.2	0.887	1
PLEKHF2	Del_15q21.1	0.887	1
RLIM	21q-Del	0.887	1
RLIM	Amp_20q13.31	0.887	1
PTEN	22q-Del	0.887	1
IDH1	Del_15q21.1	0.887	1
APC	WNT1	0.888	1
ARID1A	5q-Del	0.888	1
ARID1A	Amp_2q33.1	0.888	1
SOX9	Del_6p25.3	0.888	1
SOX9	Del_19p13.3	0.888	1
RPTN	Amp_20q11.21	0.888	1
DIP2B	Del_1p36.11	0.888	1
CDK12	7q-Amp	0.888	1
Amp_8p11.23	Del_15q21.1	0.888	1
APC	NR1H3	0.889	1
SOX9	20p-Amp	0.889	1
ACVR1B	Amp_8q12.1	0.889	1
PRKDC	Amp_10q22.3	0.889	1
ALG12	Amp_20q11.21	0.889	1
PCBP1	Del_18p11.31	0.889	1
SMAD4	Amp_2q33.1	0.889	1
FYN	Del_18p11.31	0.889	1
APC	RNF43	0.89	1
CRIPAK	Amp_8p11.23	0.89	1
BCOR	Amp_8p11.23	0.89	1
BCOR	Del_14q31.1	0.89	1
SELPLG	17p-Del	0.89	1
CHUK	12p-Amp	0.89	1
PLEKHF2	Del_14q31.1	0.89	1
ASXL1	Amp_8q24.21	0.89	1
DDX26B	Del_5q22.2	0.89	1
RBPJ	Del_5q22.2	0.89	1
SMAD4	Amp_20q13.31	0.89	1
PTGDR	Del_8p23.2	0.89	1
12p-Amp	Del_3p26.3	0.89	1
Amp_6p21.1	Del_5q12.1	0.89	1
Amp_10q22.3	Amp_13q12.2	0.89	1
ZFP36L2	Amp_13q12.2	0.891	1
ALPK2	Del_1p33	0.891	1
SMAD4	Del_18q21.2	0.891	1
SETD2	Amp_5q22.3	0.891	1
Amp_8p11.21	Del_14q31.1	0.891	1
ACVR1B	Del_1p33	0.892	1
ACVR1B	Del_4q22.1	0.892	1
CDH1	Amp_19p13.2	0.892	1
CDH1	Del_3q26.31	0.892	1
CDH1	Del_10q25.2	0.892	1
NF2	Del_5q21.2	0.892	1
NF1	Del_3p14.2	0.892	1
ALPK2	Del_1p36.11	0.892	1
DIP2B	Amp_8q24.21	0.892	1
PIK3R1	Del_21q11.2	0.892	1
ROS1	1p-Del	0.892	1
LARP4B	Amp_8q24.21	0.892	1
2q-Amp	18q-Del	0.892	1
8p-Amp	Del_21q11.2	0.892	1
4p-Del	Amp_8p11.21	0.892	1
Amp_16p11.2	Del_1p33	0.892	1
APC	Amp_11p15.5	0.893	1
MLH1	Amp_20q11.21	0.893	1
P2RY13	17p-Del	0.893	1
DIP2B	Del_15q15.2	0.893	1
PCBP1	17p-Del	0.893	1
RSPH3	Amp_13q12.2	0.893	1
ROS1	21q-Del	0.893	1
ROS1	22q-Del	0.893	1
DCLK2	17p-Del	0.893	1
CREBBP	1q-Amp	0.893	1
6p-Amp	18p-Del	0.893	1
Amp_8q24.21	Del_21q11.2	0.893	1
CRIPAK	13q-Amp	0.894	1
TP53	Del_2p12	0.894	1
FAM123B	4q-Del	0.894	1
ZFP36L2	Amp_13q22.1	0.894	1
TXNDC2	Del_17p12	0.894	1
OR4D10	15q-Del	0.894	1
EGR1	Del_15q11.2	0.894	1
FBXW7	7q-Amp	0.894	1
ATXN3L	PIK3R1	0.894	1
ATXN3L	8p-Amp	0.894	1
PLEKHF2	Del_15q11.2	0.894	1
PTCH1	Del_22q13.32	0.894	1
PIK3R1	Amp_19p13.2	0.894	1
RB1	Del_14q11.2	0.894	1
IDH1	Amp_20q11.21	0.894	1
Amp_1q31.1	Del_16q23.1	0.894	1
Amp_12p13.32	Del_22q13.32	0.894	1
TXNDC2	14q-Del	0.895	1
TXNDC2	Del_1p13.2	0.895	1
FMN2	Amp_13q12.13	0.895	1
RHOA	Amp_8q24.21	0.895	1
RB1	Del_3p26.3	0.895	1
TOP2B	Amp_11p15.5	0.895	1
HIST1H1T	18q-Del	0.895	1
IDH1	Del_18q21.2	0.895	1
Del_8p22	Del_16q23.1	0.895	1
FAM123B	16p-Amp	0.896	1
BCOR	Del_10q25.2	0.896	1
SELPLG	Del_5q21.2	0.896	1
MAPK6	Del_4p16.2	0.896	1
MAPK6	Del_5q21.2	0.896	1
CHUK	4p-Del	0.896	1
BCL9	Del_10q23.31	0.896	1
ZBTB20	Del_15q11.2	0.896	1
ASXL1	Del_12p13.1	0.896	1
RSPH3	Amp_13q22.1	0.896	1
C2orf29	Del_5q21.2	0.896	1
SLC26A8	8q-Amp	0.896	1
L1TD1	Del_5q21.2	0.896	1
FKBP9	8q-Amp	0.896	1
FKBP9	Del_4p16.2	0.896	1
FKBP9	Del_5q21.2	0.896	1
ALDH1A3	8q-Amp	0.896	1
ALDH1A3	Del_5q21.2	0.896	1
PTGDR	Del_18q22.1	0.896	1
IDH1	Del_15q11.2	0.896	1
ARID1A	Amp_8q12.1	0.897	1
ARID1A	Del_5q12.1	0.897	1
NF2	Del_14q11.2	0.897	1
FBXW7	Del_8p22	0.897	1
PRRG1	14q-Del	0.897	1
PCBP1	Del_18q12.2	0.897	1
BMPR2	9p-Amp	0.897	1
BIRC3	14q-Del	0.897	1
14q-Del	Amp_10q22.3	0.897	1
Del_16q23.1	Del_18q21.2	0.897	1
CRIPAK	20p-Amp	0.898	1
FAM123B	8p-Del	0.898	1
B2M	Del_4q22.1	0.898	1
SELPLG	Del_18q22.1	0.898	1
FBXW7	Del_15q21.1	0.898	1
P2RY13	Del_4q35.1	0.898	1
PCBP1	Del_4q35.1	0.898	1
C2orf29	Del_18q22.1	0.898	1
RB1	13q-Amp	0.898	1
TOP2B	7p-Amp	0.898	1
DCLK2	Del_4q35.1	0.898	1
GPATCH8	Del_4q35.1	0.898	1
SETD2	Del_5q21.2	0.898	1
CDK12	20p-Del	0.898	1
CDK12	Amp_8q12.1	0.898	1
16q-Amp	Del_4q35.1	0.898	1
MLH1	Del_17q24.3	0.899	1
NF1	Del_8p22	0.899	1
FBXW7	1p-Del	0.899	1
ERBB2	Del_17p12	0.899	1
GRB2	Amp_20q12	0.899	1
DIP2B	8p-Del	0.899	1
DIP2B	Del_15q21.1	0.899	1
LARP4B	Del_15q21.1	0.899	1
SLC12A6	13q-Amp	0.899	1
CTNNB1	20p-Del	0.899	1
Amp_1q31.1	Del_17p12	0.899	1
CRIPAK	7p-Amp	0.9	1
TP53	FAM123B	0.9	1
BCOR	7p-Amp	0.9	1
NF2	14q-Del	0.9	1
MAPK6	7p-Amp	0.9	1
RHOA	Del_1p36.11	0.9	1
RPTN	Amp_12p13.32	0.9	1
BCL9	Amp_13q12.2	0.9	1
IQCD	Del_1p36.11	0.9	1
IQCD	Del_8p23.2	0.9	1
PIK3R1	Del_10q25.2	0.9	1
IFT57	Del_1p36.11	0.9	1
RBBP7	Amp_12p13.32	0.9	1
TOP2B	Del_5q12.1	0.9	1
FKBP9	7p-Amp	0.9	1
PTEN	12p-Amp	0.9	1
PTEN	Del_22q13.32	0.9	1
ALDH1A3	7p-Amp	0.9	1
BCORL1	7q-Amp	0.9	1
CREBBP	Del_5q21.2	0.9	1
12p-Amp	Del_6p25.3	0.9	1
21q-Del	Amp_8q12.1	0.9	1
22q-Del	Amp_8q12.1	0.9	1
Del_5q12.1	Del_6p25.3	0.9	1
RNF43	Amp_5q22.3	0.901	1
RNF43	Del_12p13.1	0.901	1
MAPK6	21q-Del	0.901	1
RHOA	Amp_8q12.1	0.901	1
NLRC4	Del_4q35.1	0.901	1
PCBP1	Del_17p12	0.901	1
C2orf29	22q-Del	0.901	1
SMAD4	Amp_12p13.32	0.901	1
SLC26A8	21q-Del	0.901	1
ALDH1A3	21q-Del	0.901	1
BCORL1	Del_4q35.1	0.901	1
SLC12A6	Del_4q35.1	0.901	1
BCOR	Amp_1q31.1	0.902	1
FBXW7	Amp_6p21.1	0.902	1
ASXL1	7q-Amp	0.902	1
ALG12	Amp_20q12	0.902	1
PCBP1	Del_15q22.33	0.902	1
RSPH3	17p-Del	0.902	1
RB1	Del_22q13.32	0.902	1
DCLK2	Del_15q22.33	0.902	1
CREBBP	16q-Amp	0.902	1
Amp_8q12.1	Del_21q11.2	0.902	1
Amp_13q12.13	Del_16q23.1	0.902	1
ARID1A	14q-Del	0.903	1
RHOA	Del_15q15.2	0.903	1
FAM9A	7q-Amp	0.903	1
BCL9	Amp_13q22.1	0.903	1
IQCD	Del_15q15.2	0.903	1
APC	Amp_17q12	0.904	1
CRIPAK	Amp_13q12.2	0.904	1
TP53	P2RY13	0.904	1
TP53	PCBP1	0.904	1
TP53	DCLK2	0.904	1
FMN2	Del_10q23.31	0.904	1
NF2	Amp_1q31.1	0.904	1
PRKDC	Del_3p14.2	0.904	1
PCBP1	Amp_20q12	0.904	1
ROS1	4p-Del	0.904	1
RB1	16p-Amp	0.904	1
DCLK2	Amp_20q12	0.904	1
HLA-A	Del_5q22.2	0.904	1
BMPR2	Del_21q11.2	0.904	1
12p-Amp	Del_8p23.2	0.904	1
Amp_8p11.21	Del_21q11.2	0.904	1
ACVR1B	Del_10q23.31	0.905	1
CDH1	13q-Amp	0.905	1
CDH1	Amp_1q31.1	0.905	1
CDH1	Amp_17q24.1	0.905	1
MLH1	1p-Del	0.905	1
NF2	Del_14q31.1	0.905	1
ATM	Del_2p12	0.905	1
IDH1	18p-Del	0.905	1
TP53	2p-Amp	0.906	1
MAPK6	Del_8p22	0.906	1
RHOA	Del_14q11.2	0.906	1
CHUK	Amp_17q12	0.906	1
BCL9	Del_15q22.33	0.906	1
P2RY13	Del_22q13.32	0.906	1
IQCD	Del_15q21.1	0.906	1
NLRC4	Del_15q22.33	0.906	1
C11orf30	Amp_17q12	0.906	1
PIK3R1	Amp_8q24.21	0.906	1
RBBP7	Amp_8q24.21	0.906	1
DCLK2	Del_22q13.32	0.906	1
FYN	Del_22q13.32	0.906	1
SETD2	Amp_8p11.21	0.906	1
ATM	Del_14q11.2	0.906	1
Amp_17q12	Del_4p16.2	0.906	1
FAM123B	FMN2	0.907	1
NF2	Del_8p22	0.907	1
PRKDC	Del_4p16.2	0.907	1
PRKDC	Del_5q21.2	0.907	1
RPTN	Amp_20q12	0.907	1
PRRG1	7p-Amp	0.907	1
BIRC3	7p-Amp	0.907	1
Amp_10q22.3	Amp_13q12.13	0.907	1
CRIPAK	Amp_13q22.1	0.908	1
SOX9	BCL9	0.908	1
FMN2	Del_8q11.1	0.908	1
SELPLG	Del_18q21.2	0.908	1
FAM9A	Amp_13q12.13	0.908	1
ASXL1	Del_10q23.31	0.908	1
PTCH1	Del_6p25.3	0.908	1
PTCH1	Del_19p13.3	0.908	1
C11orf30	Del_1p36.11	0.908	1
RSPH3	Amp_13q12.13	0.908	1
C2orf29	Del_18q21.2	0.908	1
NEXN	Del_4p16.2	0.908	1
2q-Amp	Del_18q12.2	0.908	1
Amp_2q33.1	Del_4p16.2	0.908	1
CRIPAK	Del_1p33	0.909	1
BCOR	Del_1p33	0.909	1
OR4D10	18q-Del	0.909	1
RHOA	Del_14q31.1	0.909	1
DIP2B	Del_15q11.2	0.909	1
PCBP1	18p-Del	0.909	1
IFT57	Amp_8p11.23	0.909	1
RB1	7q-Amp	0.909	1
RB1	9p-Amp	0.909	1
FYN	18p-Del	0.909	1
ZNF486	Del_14q31.1	0.909	1
CREBBP	Amp_1q31.1	0.909	1
MGA	1q-Amp	0.91	1
DIP2B	Amp_1q31.1	0.91	1
12p-Amp	Del_1p13.2	0.91	1
BCL9	Del_22q13.32	0.911	1
ALPK2	Del_4q35.1	0.911	1
PIK3R1	Del_18q12.2	0.911	1
RB1	Amp_13q12.13	0.911	1
BCORL1	Del_22q13.32	0.911	1
SETD2	Del_6q26	0.911	1
STARD3NL	14q-Del	0.912	1
RHOA	Del_15q11.2	0.912	1
EGR1	SMAD4	0.912	1
NF1	4q-Del	0.912	1
CHUK	Del_15q15.2	0.912	1
ST3GAL6	SMAD4	0.912	1
IQCD	Del_15q11.2	0.912	1
NR1H3	Del_21q11.2	0.912	1
PTCH1	22q-Del	0.912	1
C11orf30	Del_15q15.2	0.912	1
PCBP1	14q-Del	0.912	1
PCBP1	Del_21q11.2	0.912	1
MPHOSPH10	Amp_20p11.21	0.912	1
RBBP7	Del_4q22.1	0.912	1
RBBP7	Del_8p23.2	0.912	1
TOP2B	Amp_20p11.21	0.912	1
DCLK2	14q-Del	0.912	1
DCLK2	Del_21q11.2	0.912	1
HLA-A	Del_4q22.1	0.912	1
BMPR2	20p-Del	0.912	1
FYN	14q-Del	0.912	1
GPATCH8	Del_21q11.2	0.912	1
NEXN	21q-Del	0.912	1
PTGDR	Del_8p22	0.912	1
ZNF486	Del_15q11.2	0.912	1
18p-Del	Amp_1q31.1	0.912	1
21q-Del	Amp_2q33.1	0.912	1
22q-Del	Amp_2q33.1	0.912	1
ZFP36L2	Del_18q22.1	0.913	1
ACVR1B	Del_4q35.1	0.913	1
FMN2	18q-Del	0.913	1
FMN2	Amp_13q22.1	0.913	1
RPTN	Del_18q22.1	0.913	1
ATXN3L	17p-Del	0.913	1
BCL9	Amp_11p15.5	0.913	1
ASXL1	21q-Del	0.913	1
RBPJ	Del_4q35.1	0.913	1
BCORL1	Amp_11p15.5	0.913	1
BCORL1	Del_1p13.2	0.913	1
SLC12A6	Amp_11p15.5	0.913	1
NEXN	17p-Del	0.913	1
ATM	Amp_6p21.1	0.913	1
TP53	SMAD2	0.914	1
NF2	Del_1p33	0.914	1
NR1H3	Amp_20p11.21	0.914	1
ALG12	Amp_20q13.31	0.914	1
GRB2	Amp_20q13.31	0.914	1
ROS1	Del_15q15.2	0.914	1
RB1	Del_15q11.2	0.914	1
PTEN	Del_7q31.1	0.914	1
CREBBP	Amp_8p11.23	0.914	1
CTNNB1	Amp_17q12	0.914	1
FAM123B	Del_4q22.1	0.915	1
PRKDC	Amp_17q24.1	0.915	1
NF1	Del_3p26.3	0.915	1
C11orf30	Amp_8p11.21	0.915	1
DIP2B	Del_5q22.2	0.915	1
SMAD4	2q-Amp	0.915	1
IDH1	Amp_20q12	0.915	1
FAM123B	Del_4p16.2	0.916	1
SOX9	Amp_16p11.2	0.916	1
SOX9	Del_5q22.2	0.916	1
TXNDC2	Amp_17q12	0.916	1
OR4D10	Del_15q22.33	0.916	1
PRKDC	21q-Del	0.916	1
CHUK	Del_15q21.1	0.916	1
ATXN3L	8q-Amp	0.916	1
ALPK2	Del_6p25.3	0.916	1
ASXL1	Del_6p25.3	0.916	1
ASXL1	Del_6q26	0.916	1
ASXL1	Del_19p13.3	0.916	1
C11orf30	Del_15q21.1	0.916	1
DIP2B	13q-Amp	0.916	1
PRRG1	Del_1p36.11	0.916	1
PIK3R1	17q-Amp	0.916	1
ROS1	5q-Del	0.916	1
ROS1	Amp_2q33.1	0.916	1
ROS1	Del_3q26.31	0.916	1
LARP4B	Del_1p33	0.916	1
NEXN	20p-Amp	0.916	1
PRPS1	Del_18p11.31	0.916	1
PTGDR	Del_18p11.31	0.916	1
ATM	Amp_16p11.2	0.916	1
8p-Amp	Del_8p23.2	0.916	1
Amp_10q22.3	Del_1p36.11	0.916	1
Del_1p33	Del_17q24.3	0.916	1
MLH1	21q-Del	0.917	1
SELPLG	18q-Del	0.917	1
C2orf29	18q-Del	0.917	1
CREBBP	Amp_16p11.2	0.917	1
12p-Amp	Del_5q12.1	0.917	1
8q-Amp	22q-Del	0.917	1
Amp_11p15.5	Del_3p14.2	0.917	1
ARID1A	SMAD2	0.918	1
CRIPAK	Del_8p22	0.918	1
TP53	ZFP36L2	0.918	1
TP53	TPRKB	0.918	1
TP53	RBBP7	0.918	1
BCOR	Del_8p22	0.918	1
OR4D10	17p-Del	0.918	1
FBXW7	2p-Amp	0.918	1
BCL9	Del_5q12.1	0.918	1
PTCH1	1p-Del	0.918	1
PTCH1	Del_10q21.1	0.918	1
NLRC4	12p-Amp	0.918	1
NLRC4	Del_5q12.1	0.918	1
RB1	22q-Del	0.918	1
PTEN	Del_3p14.2	0.918	1
BCORL1	Del_5q12.1	0.918	1
CDK12	Del_10q25.2	0.918	1
CTNNB1	Del_17p12	0.918	1
OR4D10	Del_18p11.31	0.919	1
NF1	Del_10q25.2	0.919	1
MVK	Del_15q15.2	0.919	1
BCL9	Del_21q11.2	0.919	1
ZBTB20	Del_5q21.2	0.919	1
BCORL1	14q-Del	0.919	1
BCORL1	Del_21q11.2	0.919	1
MAP4K3	Del_4p16.2	0.919	1
MAP4K3	Del_5q21.2	0.919	1
NEXN	7p-Amp	0.919	1
NEXN	7q-Amp	0.919	1
BIRC3	Del_15q15.2	0.919	1
IDH1	Del_4p16.2	0.919	1
IDH1	Del_5q21.2	0.919	1
CREBBP	Del_1p33	0.919	1
22q-Del	Amp_8q24.21	0.919	1
Amp_8p11.21	Del_10q25.2	0.919	1
Amp_12p13.32	Del_1p13.2	0.919	1
SMAD2	Del_17p12	0.92	1
OR4D10	Del_22q13.32	0.92	1
FBXW7	Del_6q26	0.92	1
CHUK	Amp_8p11.23	0.92	1
C11orf30	Amp_8p11.23	0.92	1
DIP2B	15q-Del	0.92	1
PCBP1	Amp_20q13.31	0.92	1
PIK3R1	18q-Del	0.92	1
RLIM	20q-Amp	0.92	1
ROS1	Amp_17q12	0.92	1
ROS1	Del_15q21.1	0.92	1
DDX26B	Del_22q13.32	0.92	1
SMAD4	Amp_11p15.5	0.92	1
SMAD4	Del_1p13.2	0.92	1
DCLK2	Amp_20q13.31	0.92	1
LARP4B	15q-Del	0.92	1
CTNNB1	14q-Del	0.92	1
Amp_12p13.32	Del_10q21.1	0.92	1
RNF43	21q-Del	0.921	1
FAM123B	18p-Del	0.921	1
FAM123B	Del_5q12.1	0.921	1
SOX9	Del_1p36.11	0.921	1
ZFP36L2	Del_18q21.2	0.921	1
ACVR1B	13q-Amp	0.921	1
OR4D10	20q-Amp	0.921	1
RPTN	Del_18q21.2	0.921	1
BCL9	Amp_13q12.13	0.921	1
ST3GAL6	Amp_20p11.21	0.921	1
PIK3R1	Del_18q22.1	0.921	1
RBPJ	20q-Amp	0.921	1
RB1	1p-Del	0.921	1
PTEN	Amp_20q11.21	0.921	1
PTEN	Del_4p16.2	0.921	1
RNF43	Amp_8q12.1	0.922	1
FAM123B	Del_18q22.1	0.922	1
SOX9	15q-Del	0.922	1
ACVR1B	Del_22q13.32	0.922	1
MLH1	20q-Amp	0.922	1
PRKDC	Del_14q31.1	0.922	1
MVK	Del_15q21.1	0.922	1
ST3GAL6	7q-Amp	0.922	1
PLEKHF2	7q-Amp	0.922	1
PRRG1	Del_14q11.2	0.922	1
RB1	14q-Del	0.922	1
DCLK2	Amp_13q12.2	0.922	1
PTEN	Del_14q11.2	0.922	1
CDK12	Del_14q11.2	0.922	1
BIRC3	Del_15q21.1	0.922	1
IDH1	Del_18q12.2	0.922	1
7p-Amp	22q-Del	0.922	1
ZFP36L2	13q-Amp	0.923	1
SELPLG	Del_17p12	0.923	1
RPTN	13q-Amp	0.923	1
THOC7	8p-Del	0.923	1
BCL9	Del_3p14.2	0.923	1
ZBTB20	21q-Del	0.923	1
NLRC4	4p-Del	0.923	1
NLRC4	Del_3p14.2	0.923	1
RSPH3	8p-Del	0.923	1
RB1	Del_5q12.1	0.923	1
MAP4K3	21q-Del	0.923	1
MAP4K3	22q-Del	0.923	1
MAP4K3	Del_8p23.2	0.923	1
SLC12A6	4p-Del	0.923	1
BIRC3	Amp_8q12.1	0.923	1
BIRC3	Amp_8q24.21	0.923	1
IDH1	21q-Del	0.923	1
IDH1	Amp_13q22.1	0.923	1
Amp_12p13.32	Del_4p16.2	0.923	1
Amp_12p13.32	Del_5q21.2	0.923	1
CRIPAK	Del_18p11.31	0.924	1
FAM123B	20p-Del	0.924	1
ACVR1B	20p-Amp	0.924	1
BCOR	Amp_8q12.1	0.924	1
SELPLG	Amp_12p13.32	0.924	1
PRKDC	Del_1p33	0.924	1
RPTN	Amp_20q13.31	0.924	1
CHUK	Del_15q11.2	0.924	1
MGA	Del_3p14.2	0.924	1
TPRKB	Del_8p23.2	0.924	1
PLEKHF2	20q-Amp	0.924	1
ALPK2	1q-Amp	0.924	1
ASXL1	1q-Amp	0.924	1
C11orf30	Del_15q11.2	0.924	1
PIK3R1	8q-Amp	0.924	1
RLIM	Del_4q22.1	0.924	1
ROS1	Del_22q13.32	0.924	1
TOP2B	Del_15q15.2	0.924	1
PTGDR	Del_17p12	0.924	1
GMNN	Amp_20p11.21	0.924	1
NF2	Amp_8q24.21	0.925	1
NF2	Del_8q11.1	0.925	1
NF1	Del_15q22.33	0.925	1
ERBB2	Del_21q11.2	0.925	1
C11orf30	8p-Amp	0.925	1
DIP2B	Del_4q22.1	0.925	1
PRRG1	Del_14q31.1	0.925	1
RBBP7	Del_4q35.1	0.925	1
HLA-A	Del_4q35.1	0.925	1
GPATCH8	8q-Amp	0.925	1
SETD2	14q-Del	0.925	1
BIRC3	Amp_8p11.23	0.925	1
BIRC3	Del_14q31.1	0.925	1
8p-Amp	Del_3p26.3	0.925	1
9p-Amp	Del_4q22.1	0.925	1
Amp_1q31.1	Del_21q11.2	0.925	1
Amp_8p11.23	Amp_10q22.3	0.925	1
Amp_11p15.5	Del_5q22.2	0.925	1
ARID1A	Del_4p16.2	0.926	1
TP53	BCOR	0.926	1
TP53	TOP2B	0.926	1
B2M	14q-Del	0.926	1
BCOR	4q-Del	0.926	1
OR4D10	14q-Del	0.926	1
ERBB2	Del_5q21.2	0.926	1
DIP2B	Amp_13q12.2	0.926	1
RBPJ	Del_21q11.2	0.926	1
CDK12	8p-Del	0.926	1
CTNNB1	Del_18q12.2	0.926	1
KDM6A	12p-Amp	0.926	1
KDM6A	Del_5q12.1	0.926	1
Amp_17q24.1	Del_4p16.2	0.926	1
APC	Del_2p12	0.927	1
FAM123B	7p-Amp	0.927	1
SOX9	Del_4q22.1	0.927	1
FBXW7	Del_5q12.1	0.927	1
MVK	Del_15q11.2	0.927	1
P2RY13	7p-Amp	0.927	1
NR1H3	7p-Amp	0.927	1
C14orf184	17p-Del	0.927	1
FYN	7p-Amp	0.927	1
LARP4B	Del_10q23.31	0.927	1
GPATCH8	7p-Amp	0.927	1
CDK12	Del_14q31.1	0.927	1
BIRC3	Del_15q11.2	0.927	1
CTNNB1	Amp_20q13.31	0.927	1
13q-Amp	Del_6p25.3	0.927	1
MLH1	Del_3q26.31	0.928	1
OR4D10	Amp_20q11.21	0.928	1
MAPK6	Del_5q22.2	0.928	1
ERBB2	8q-Amp	0.928	1
PLEKHF2	17p-Del	0.928	1
PTCH1	Del_15q15.2	0.928	1
PCBP1	Del_18q22.1	0.928	1
SMAD4	Del_18q22.1	0.928	1
TOP2B	Del_15q21.1	0.928	1
FKBP9	Del_5q22.2	0.928	1
PTEN	17p-Del	0.928	1
PTEN	Del_15q22.33	0.928	1
BIRC3	Del_8p23.2	0.928	1
17q-Amp	Del_5q21.2	0.928	1
2q-Amp	Del_18q22.1	0.928	1
8q-Amp	Del_7q31.1	0.928	1
18p-Del	Del_16q23.1	0.928	1
Amp_11p15.5	Del_16q23.1	0.928	1
SOX9	CTNNB1	0.929	1
FMN2	8p-Del	0.929	1
OR4D10	Del_18q12.2	0.929	1
EGR1	Amp_13q22.1	0.929	1
NF1	8p-Del	0.929	1
NF1	Del_19p13.3	0.929	1
ATXN3L	Del_18q22.1	0.929	1
IQCD	Del_18p11.31	0.929	1
ALPK2	Amp_11p15.5	0.929	1
DIP2B	Amp_13q22.1	0.929	1
IFT57	Del_18p11.31	0.929	1
ROS1	Del_10q25.2	0.929	1
RBBP7	Del_15q22.33	0.929	1
TOP2B	Amp_8p11.21	0.929	1
PRPS1	18p-Del	0.929	1
PTGDR	18p-Del	0.929	1
HIST1H1T	20q-Amp	0.929	1
CREBBP	16p-Amp	0.929	1
CREBBP	Del_8q11.1	0.929	1
Amp_8p11.23	Del_1p36.11	0.929	1
Amp_8p11.21	Del_6p25.3	0.929	1
ARID1A	Amp_6p21.1	0.93	1
TP53	L1TD1	0.93	1
ACVR1B	14q-Del	0.93	1
BCOR	17p-Del	0.93	1
SMAD2	SMAD4	0.93	1
FMN2	Amp_11p15.5	0.93	1
NF1	Del_8p23.2	0.93	1
CHUK	Del_18p11.31	0.93	1
P2RY13	Del_1p36.11	0.93	1
PTCH1	Del_8p23.2	0.93	1
PTCH1	Del_8p22	0.93	1
SMAD4	17q-Amp	0.93	1
DCLK2	Del_1p36.11	0.93	1
FKBP9	8p-Del	0.93	1
BMPR2	Del_10q25.2	0.93	1
ALDH1A3	8p-Del	0.93	1
FAM123B	5q-Del	0.931	1
FAM123B	Del_3q26.31	0.931	1
TXNDC2	Del_14q31.1	0.931	1
MLH1	Amp_8q24.21	0.931	1
PRKDC	Del_8q11.1	0.931	1
RPTN	Del_22q13.32	0.931	1
TPRKB	13q-Amp	0.931	1
ERBB2	21q-Del	0.931	1
ERBB2	Amp_13q12.2	0.931	1
PLEKHF2	Amp_20q11.21	0.931	1
GRB2	18q-Del	0.931	1
PLAGL2	Del_8p23.2	0.931	1
FKBP9	15q-Del	0.931	1
ATM	Del_6q26	0.931	1
HIST1H1T	13q-Amp	0.931	1
KDM6A	Del_3p14.2	0.931	1
Amp_16p11.2	Del_3p14.2	0.931	1
SMAD2	21q-Del	0.932	1
SMAD2	22q-Del	0.932	1
NF1	18p-Del	0.932	1
FBXW7	Del_15q15.2	0.932	1
MGA	Del_5q22.2	0.932	1
BCL9	8p-Del	0.932	1
DIP2B	4q-Del	0.932	1
PTEN	Del_1p36.11	0.932	1
MAP4K3	17p-Del	0.932	1
IDH1	17p-Del	0.932	1
IDH1	Amp_20q13.31	0.932	1
17q-Amp	22q-Del	0.932	1
9p-Amp	4q-Del	0.932	1
TXNDC2	8p-Amp	0.933	1
MLH1	Del_4q35.1	0.933	1
GGT1	20p-Amp	0.933	1
P2RY13	Del_15q15.2	0.933	1
ASXL1	14q-Del	0.933	1
PCBP1	Del_15q15.2	0.933	1
PIK3R1	Del_6p25.3	0.933	1
PIK3R1	Del_6q26	0.933	1
SMAD4	12p-Amp	0.933	1
DCLK2	Del_15q15.2	0.933	1
ATM	14q-Del	0.933	1
ATM	Del_21q11.2	0.933	1
2q-Amp	Del_18q21.2	0.933	1
6p-Amp	18q-Del	0.933	1
8p-Amp	Del_19p13.3	0.933	1
ARID1A	Del_15q22.33	0.934	1
CDH1	Amp_6p21.1	0.934	1
CDH1	Del_3p26.3	0.934	1
SELPLG	Del_4q22.1	0.934	1
MAPK6	Del_4q22.1	0.934	1
NF1	Del_4p16.2	0.934	1
FBXW7	8p-Del	0.934	1
FBXW7	Del_10q23.31	0.934	1
ATXN3L	Amp_12p13.32	0.934	1
IFT57	SMAD4	0.934	1
SLC26A8	Del_4q22.1	0.934	1
RB1	8p-Amp	0.934	1
L1TD1	Del_4q22.1	0.934	1
ALDH1A3	Del_4q22.1	0.934	1
ATM	Del_15q15.2	0.934	1
Amp_12p13.32	Del_3q26.31	0.934	1
CRIPAK	Amp_11p15.5	0.935	1
CRIPAK	Del_1p13.2	0.935	1
BCOR	Amp_11p15.5	0.935	1
STARD3NL	Del_14q11.2	0.935	1
OR4D10	18p-Del	0.935	1
ATXN3L	Del_18p11.31	0.935	1
MGA	Amp_17q12	0.935	1
P2RY13	Del_15q21.1	0.935	1
ASXL1	12p-Amp	0.935	1
PCBP1	Del_15q21.1	0.935	1
PCBP1	Del_18q21.2	0.935	1
RLIM	Amp_8p11.21	0.935	1
ROS1	Del_12p13.1	0.935	1
TOP2B	Del_15q11.2	0.935	1
DCLK2	Amp_13q12.13	0.935	1
DCLK2	Del_14q11.2	0.935	1
DCLK2	Del_15q21.1	0.935	1
FYN	Del_14q11.2	0.935	1
ATM	Del_5q12.1	0.935	1
1p-Del	Amp_8p11.21	0.935	1
ARID1A	8q-Amp	0.936	1
NF2	1p-Del	0.936	1
PRKDC	7p-Amp	0.936	1
CHUK	Del_5q21.2	0.936	1
ATXN3L	Amp_8q12.1	0.936	1
ATXN3L	Del_18q21.2	0.936	1
ERBB2	BMPR2	0.936	1
ASXL1	7p-Amp	0.936	1
PTCH1	Del_15q21.1	0.936	1
PLAGL2	13q-Amp	0.936	1
PRRG1	13q-Amp	0.936	1
C2orf29	Amp_20p11.21	0.936	1
PTEN	Amp_17q24.1	0.936	1
BMPR2	Amp_1q31.1	0.936	1
ATM	2q-Amp	0.936	1
ATM	20p-Del	0.936	1
CREBBP	Del_10q23.31	0.936	1
7p-Amp	Del_22q13.32	0.936	1
ZFP36L2	14q-Del	0.937	1
MLH1	Amp_17q12	0.937	1
BCOR	Amp_8q24.21	0.937	1
SMAD2	Amp_8q24.21	0.937	1
FMN2	20p-Del	0.937	1
SELPLG	Del_18q12.2	0.937	1
RHOA	Del_17p12	0.937	1
FAM9A	Amp_8p11.21	0.937	1
RPTN	14q-Del	0.937	1
RPTN	Del_21q11.2	0.937	1
PTCH1	7p-Amp	0.937	1
PLAGL2	20p-Amp	0.937	1
RSPH3	Amp_8p11.21	0.937	1
C2orf29	Del_18q12.2	0.937	1
RBBP7	Del_8p22	0.937	1
RBBP7	Del_21q11.2	0.937	1
PTEN	Amp_20q13.31	0.937	1
HLA-A	17p-Del	0.937	1
HLA-A	Del_8p22	0.937	1
HLA-A	Del_21q11.2	0.937	1
ZNF486	Del_17p12	0.937	1
APC	ZBTB20	0.938	1
STARD3NL	Del_14q31.1	0.938	1
MGA	7q-Amp	0.938	1
P2RY13	Del_14q31.1	0.938	1
PCBP1	Amp_8p11.23	0.938	1
PCBP1	Del_14q31.1	0.938	1
DCLK2	Amp_8p11.23	0.938	1
DCLK2	Del_14q31.1	0.938	1
FYN	Del_14q31.1	0.938	1
BIRC3	20p-Amp	0.938	1
ATM	21q-Del	0.938	1
8p-Amp	4q-Del	0.938	1
CRIPAK	12p-Amp	0.939	1
FAM123B	Del_1p36.11	0.939	1
BCOR	Del_5q12.1	0.939	1
EGR1	8p-Del	0.939	1
PLEKHF2	8p-Del	0.939	1
ALPK2	Amp_16p11.2	0.939	1
RLIM	Del_15q22.33	0.939	1
VCX2	8p-Del	0.939	1
RBPJ	Amp_20p11.21	0.939	1
13q-Amp	Del_16q23.1	0.939	1
8q-Amp	Del_1p33	0.939	1
18q-Del	Del_16q23.1	0.939	1
Amp_1q31.1	Del_18p11.31	0.939	1
CRIPAK	PRKDC	0.94	1
FMN2	Amp_2q33.1	0.94	1
FMN2	Amp_8q24.21	0.94	1
FMN2	Amp_19p13.2	0.94	1
PRKDC	7q-Amp	0.94	1
CHUK	21q-Del	0.94	1
P2RY13	Del_15q11.2	0.94	1
C11orf30	22q-Del	0.94	1
PCBP1	Del_15q11.2	0.94	1
PIK3R1	1q-Amp	0.94	1
SMAD4	Amp_16p11.2	0.94	1
DCLK2	Del_15q11.2	0.94	1
FYN	Del_15q11.2	0.94	1
ATM	8p-Del	0.94	1
CTNNB1	18q-Del	0.94	1
7q-Amp	Del_22q13.32	0.94	1
8p-Amp	Del_14q11.2	0.94	1
8q-Amp	Del_1p13.2	0.94	1
APC	1q-Amp	0.941	1
ARID1A	7p-Amp	0.941	1
ARID1A	15q-Del	0.941	1
ARID1A	Del_6q26	0.941	1
ARID1A	Del_19p13.3	0.941	1
B2M	8q-Amp	0.941	1
FMN2	21q-Del	0.941	1
NF2	9p-Amp	0.941	1
NF2	Del_17q24.3	0.941	1
NF1	Del_1p33	0.941	1
FBXW7	NR1H3	0.941	1
ATXN3L	18q-Del	0.941	1
ERBB2	Del_10q25.2	0.941	1
NR1H3	Amp_8q12.1	0.941	1
PTCH1	VCX2	0.941	1
NLRC4	Del_1p36.11	0.941	1
SMAD4	2p-Amp	0.941	1
SMAD4	14q-Del	0.941	1
SMAD4	Del_21q11.2	0.941	1
RBBP7	Del_18p11.31	0.941	1
PTEN	Del_8p23.2	0.941	1
LARP4B	Del_1p13.2	0.941	1
BCORL1	Del_1p36.11	0.941	1
RNF43	8q-Amp	0.942	1
FAM123B	Del_18q12.2	0.942	1
MLH1	Del_10q25.2	0.942	1
OR4D10	Amp_20q12	0.942	1
PRKDC	1p-Del	0.942	1
FBXW7	Del_8p23.2	0.942	1
IQCD	18p-Del	0.942	1
PLEKHF2	Amp_20q12	0.942	1
ALPK2	8p-Del	0.942	1
ASXL1	8p-Del	0.942	1
PTCH1	Del_4q22.1	0.942	1
DIP2B	Del_18p11.31	0.942	1
RLIM	Amp_20q12	0.942	1
DDX26B	Del_1p36.11	0.942	1
CDK12	7p-Amp	0.942	1
RNF43	Amp_16p11.2	0.943	1
FAM123B	18q-Del	0.943	1
SOX9	Del_10q21.1	0.943	1
MLH1	Del_14q11.2	0.943	1
FMN2	4p-Del	0.943	1
PLAGL2	Del_8p22	0.943	1
ROS1	Amp_6p21.1	0.943	1
ROS1	Del_3p26.3	0.943	1
BMPR2	Amp_12p13.32	0.943	1
NEXN	Del_4q22.1	0.943	1
GMPS	7p-Amp	0.943	1
CTNNB1	Del_14q31.1	0.943	1
12p-Amp	Del_15q15.2	0.943	1
SOX9	8p-Amp	0.944	1
CDH1	Del_6q26	0.944	1
OR4D10	Del_15q15.2	0.944	1
NF1	Del_5q12.1	0.944	1
BCL9	Del_15q15.2	0.944	1
NR1H3	Amp_8q24.21	0.944	1
NLRC4	Del_15q15.2	0.944	1
DIP2B	Amp_13q12.13	0.944	1
DIP2B	Del_15q22.33	0.944	1
DDX26B	Del_15q15.2	0.944	1
PTEN	Del_15q15.2	0.944	1
FYN	Amp_8q24.21	0.944	1
LARP4B	Del_15q22.33	0.944	1
BCORL1	Del_15q15.2	0.944	1
GPATCH8	Amp_8q24.21	0.944	1
CDK12	4q-Del	0.944	1
NEXN	Del_17p12	0.944	1
GMPS	Del_15q15.2	0.944	1
HIST1H1T	Del_18p11.31	0.944	1
ZNF486	Del_18q22.1	0.944	1
CREBBP	9p-Amp	0.944	1
CREBBP	Del_17q24.3	0.944	1
KDM6A	7p-Amp	0.944	1
APC	BCOR	0.945	1
SELPLG	Del_4q35.1	0.945	1
FBXW7	Del_21q11.2	0.945	1
MGA	9p-Amp	0.945	1
MGA	Del_17q24.3	0.945	1
DIP2B	Del_5q12.1	0.945	1
RLIM	20p-Amp	0.945	1
L1TD1	Del_4q35.1	0.945	1
FKBP9	Del_4q35.1	0.945	1
PTEN	Del_6q26	0.945	1
PTEN	Del_15q11.2	0.945	1
BCORL1	17p-Del	0.945	1
GMPS	Amp_13q12.2	0.945	1
CTNNB1	Amp_20q11.21	0.945	1
ARID1A	18p-Del	0.946	1
TP53	RBPJ	0.946	1
B2M	Del_14q11.2	0.946	1
OR4D10	Del_14q11.2	0.946	1
OR4D10	Del_15q21.1	0.946	1
NF2	Del_22q13.32	0.946	1
RHOA	Amp_20p11.21	0.946	1
ERBB2	Amp_17q24.1	0.946	1
ASXL1	Amp_12p13.32	0.946	1
IFT57	Amp_20p11.21	0.946	1
DDX26B	Del_15q21.1	0.946	1
IDH1	Del_5q22.2	0.946	1
ZNF486	Amp_20p11.21	0.946	1
SOX9	18p-Del	0.947	1
BCOR	Del_21q11.2	0.947	1
FMN2	Del_18q21.2	0.947	1
MAPK6	Amp_8p11.21	0.947	1
RHOA	17p-Del	0.947	1
PRKDC	9p-Amp	0.947	1
PRKDC	4q-Del	0.947	1
THOC7	Del_8p23.2	0.947	1
CHUK	18p-Del	0.947	1
BCL9	Del_15q21.1	0.947	1
PTCH1	4q-Del	0.947	1
NLRC4	Del_15q21.1	0.947	1
IFT57	17p-Del	0.947	1
RLIM	Del_21q11.2	0.947	1
MPHOSPH10	Del_21q11.2	0.947	1
SMAD4	Del_18p11.31	0.947	1
SLC26A8	Amp_8p11.21	0.947	1
TOP2B	22q-Del	0.947	1
BMPR2	Del_5q22.2	0.947	1
LARP4B	7q-Amp	0.947	1
LARP4B	Del_22q13.32	0.947	1
BCORL1	Del_14q11.2	0.947	1
ZNF486	17p-Del	0.947	1
12p-Amp	Del_15q21.1	0.947	1
9p-Amp	Del_22q13.32	0.947	1
Amp_11p15.5	Del_15q11.2	0.947	1
CRIPAK	Amp_20q13.31	0.948	1
TP53	C11orf30	0.948	1
FAM123B	Amp_5q22.3	0.948	1
FAM123B	Del_12p13.1	0.948	1
B2M	Amp_8p11.23	0.948	1
B2M	Del_14q31.1	0.948	1
MLH1	Amp_1q31.1	0.948	1
MLH1	Amp_17q24.1	0.948	1
SMAD2	17p-Del	0.948	1
FMN2	Del_8p23.2	0.948	1
OR4D10	Del_14q31.1	0.948	1
MAPK6	Amp_8q24.21	0.948	1
ZBTB20	15q-Del	0.948	1
ASXL1	17p-Del	0.948	1
DDX26B	Amp_8p11.23	0.948	1
RB1	Amp_8p11.23	0.948	1
RB1	Del_14q31.1	0.948	1
FKBP9	Amp_8q24.21	0.948	1
FKBP9	Del_15q22.33	0.948	1
PTEN	4q-Del	0.948	1
PTEN	Del_5q12.1	0.948	1
ALDH1A3	Del_15q22.33	0.948	1
MAP4K3	Del_8p22	0.948	1
SETD2	Amp_8q12.1	0.948	1
IDH1	Del_8p22	0.948	1
CREBBP	Del_16p13.3	0.948	1
17q-Amp	17p-Del	0.948	1
FAM123B	Del_14q11.2	0.949	1
SOX9	Del_15q22.33	0.949	1
NF1	14q-Del	0.949	1
FBXW7	Del_10q21.1	0.949	1
PIK3R1	Del_1p13.2	0.949	1
LARP4B	4p-Del	0.949	1
IDH1	20q-Amp	0.949	1
KDM6A	20q-Amp	0.949	1
KDM6A	Del_1p36.11	0.949	1
9p-Amp	4p-Del	0.949	1
9p-Amp	Del_3p14.2	0.949	1
CRIPAK	Amp_20p11.21	0.95	1
FMN2	Del_18q12.2	0.95	1
OR4D10	Del_15q11.2	0.95	1
PRKDC	Del_16p13.3	0.95	1
TPRKB	Del_17p12	0.95	1
ERBB2	Amp_13q12.13	0.95	1
DDX26B	Del_15q11.2	0.95	1
RB1	Amp_17q12	0.95	1
ALDH1A3	Del_22q13.32	0.95	1
CTNNB1	Del_18q21.2	0.95	1
6p-Amp	17p-Del	0.95	1
8p-Amp	Del_22q13.32	0.95	1
TP53	2q-Amp	0.951	1
CDH1	Amp_13q12.13	0.951	1
CDH1	Del_8p23.2	0.951	1
RPTN	20q-Amp	0.951	1
FBXW7	Amp_17q24.1	0.951	1
BCL9	Amp_8p11.21	0.951	1
HLA-A	Del_1p36.11	0.951	1
MAP4K3	Del_4q22.1	0.951	1
SLC12A6	Amp_8p11.21	0.951	1
ATM	Del_1p33	0.951	1
IDH1	Del_18q22.1	0.951	1
Amp_20p11.21	Del_3p26.3	0.951	1
TP53	Del_10q25.2	0.952	1
CDH1	1q-Amp	0.952	1
MLH1	Amp_6p21.1	0.952	1
MLH1	Amp_20q13.31	0.952	1
RHOA	8p-Del	0.952	1
NF1	4p-Del	0.952	1
PLEKHF2	Amp_8p11.21	0.952	1
PLEKHF2	Amp_20q13.31	0.952	1
DIP2B	Del_17p12	0.952	1
PIK3R1	Amp_8q12.1	0.952	1
SMAD4	Del_14q31.1	0.952	1
RB1	17p-Del	0.952	1
SETD2	Del_1p36.11	0.952	1
SETD2	Del_17q24.3	0.952	1
ATM	Del_14q31.1	0.952	1
ZNF486	8p-Del	0.952	1
ZNF486	Amp_13q22.1	0.952	1
8q-Amp	Del_16q23.1	0.952	1
20p-Del	Amp_11p15.5	0.952	1
Amp_8p11.23	Del_10q25.2	0.952	1
Amp_8p11.21	Del_3p14.2	0.952	1
ARID1A	Del_21q11.2	0.953	1
TP53	DIP2B	0.953	1
TP53	MPHOSPH10	0.953	1
FAM123B	Amp_8q12.1	0.953	1
FAM123B	Del_14q31.1	0.953	1
MLH1	14q-Del	0.953	1
OR4D10	Amp_20q13.31	0.953	1
NF2	Amp_19p13.2	0.953	1
FAM9A	13q-Amp	0.953	1
MGA	7p-Amp	0.953	1
PTCH1	Del_4p16.2	0.953	1
NLRC4	Del_15q11.2	0.953	1
C11orf30	Amp_8q24.21	0.953	1
RBPJ	Amp_20q13.31	0.953	1
SMAD4	Amp_20q12	0.953	1
KDM6A	8p-Amp	0.953	1
Amp_8q24.21	Del_1p33	0.953	1
TP53	Del_7q31.1	0.954	1
FAM123B	Del_8p22	0.954	1
B2M	Amp_8q12.1	0.954	1
MLH1	13q-Amp	0.954	1
SMAD2	Amp_13q12.13	0.954	1
WNT1	Amp_8q24.21	0.954	1
PRKDC	Del_10q21.1	0.954	1
RPTN	8q-Amp	0.954	1
NF1	Del_1p36.11	0.954	1
P2RY13	13q-Amp	0.954	1
NR1H3	13q-Amp	0.954	1
GRB2	20p-Amp	0.954	1
RSPH3	20p-Amp	0.954	1
ROS1	Del_10q23.31	0.954	1
RBBP7	18p-Del	0.954	1
DCLK2	13q-Amp	0.954	1
HLA-A	8q-Amp	0.954	1
CDK12	Del_4q35.1	0.954	1
HIST1H1T	18p-Del	0.954	1
7p-Amp	Del_16q23.1	0.954	1
Amp_20p11.21	Del_3q26.31	0.954	1
ZFP36L2	Del_14q11.2	0.955	1
ACVR1B	Del_14q11.2	0.955	1
FMN2	Amp_17q12	0.955	1
FMN2	Del_8p22	0.955	1
SELPLG	14q-Del	0.955	1
MAPK6	Del_21q11.2	0.955	1
MGA	20p-Del	0.955	1
ALPK2	15q-Del	0.955	1
PLAGL2	Amp_20p11.21	0.955	1
C2orf29	Amp_20q11.21	0.955	1
SMAD4	18q-Del	0.955	1
FYN	18q-Del	0.955	1
ALDH1A3	Del_21q11.2	0.955	1
GMPS	Amp_13q12.13	0.955	1
CREBBP	Amp_8q12.1	0.955	1
WNT1	Del_8p23.2	0.956	1
FMN2	Del_4q35.1	0.956	1
RPTN	7p-Amp	0.956	1
BCL9	Del_5q21.2	0.956	1
IQCD	20q-Amp	0.956	1
ALPK2	9p-Amp	0.956	1
NLRC4	Del_4p16.2	0.956	1
NLRC4	Del_5q21.2	0.956	1
C11orf30	8q-Amp	0.956	1
PTEN	Del_16q23.1	0.956	1
FYN	20p-Amp	0.956	1
LARP4B	Amp_17q12	0.956	1
SLC12A6	Del_4p16.2	0.956	1
NEXN	Del_15q22.33	0.956	1
BIRC3	Del_17p12	0.956	1
CREBBP	Amp_2q33.1	0.956	1
KDM6A	Amp_20q11.21	0.956	1
12p-Amp	17p-Del	0.956	1
9p-Amp	Amp_17q12	0.956	1
ACVR1B	Amp_8q24.21	0.957	1
ACVR1B	Del_14q31.1	0.957	1
CDH1	14q-Del	0.957	1
CDH1	Del_1p13.2	0.957	1
RPTN	Amp_8p11.23	0.957	1
RPTN	Del_14q31.1	0.957	1
NF1	Del_4q35.1	0.957	1
FBXW7	Amp_17q12	0.957	1
ATXN3L	Del_18q12.2	0.957	1
ERBB2	Del_18q22.1	0.957	1
PTCH1	14q-Del	0.957	1
PIK3R1	Amp_20q11.21	0.957	1
SMAD4	Amp_20q11.21	0.957	1
SMAD4	Del_6q26	0.957	1
SMAD4	Del_19p13.3	0.957	1
RBBP7	Amp_20p11.21	0.957	1
PTEN	Amp_20p11.21	0.957	1
SETD2	Del_10q21.1	0.957	1
SLC12A6	Amp_13q12.2	0.957	1
CREBBP	20p-Del	0.957	1
KDM6A	17p-Del	0.957	1
12p-Amp	Del_4q35.1	0.957	1
OR4D10	Del_18q21.2	0.958	1
NF2	Amp_20p11.21	0.958	1
NF2	Del_4p16.2	0.958	1
PRKDC	Amp_2q33.1	0.958	1
PRKDC	Del_3q26.31	0.958	1
NF1	20p-Amp	0.958	1
ERBB2	Del_5q22.2	0.958	1
ALPK2	Del_4q22.1	0.958	1
NLRC4	13q-Amp	0.958	1
PLAGL2	Amp_13q12.2	0.958	1
DIP2B	18p-Del	0.958	1
DCLK2	Amp_20q11.21	0.958	1
PTEN	15q-Del	0.958	1
CREBBP	8q-Amp	0.958	1
8p-Amp	4p-Del	0.958	1
Amp_2q33.1	Del_22q13.32	0.958	1
Del_16q23.1	Del_18p11.31	0.958	1
TP53	Amp_12p13.32	0.959	1
STARD3NL	7q-Amp	0.959	1
P2RY13	7q-Amp	0.959	1
NR1H3	7q-Amp	0.959	1
ALPK2	7q-Amp	0.959	1
PTCH1	Del_1p36.11	0.959	1
NLRC4	21q-Del	0.959	1
PLAGL2	Amp_13q22.1	0.959	1
C11orf30	Del_5q22.2	0.959	1
PCBP1	7q-Amp	0.959	1
RBBP7	Del_15q11.2	0.959	1
PTEN	Amp_13q12.2	0.959	1
PTEN	Del_21q11.2	0.959	1
FYN	7q-Amp	0.959	1
GPATCH8	7q-Amp	0.959	1
SETD2	Del_14q11.2	0.959	1
SLC12A6	Amp_13q22.1	0.959	1
PRPS1	18q-Del	0.959	1
PTGDR	18q-Del	0.959	1
ATM	17q-Amp	0.959	1
ATM	9p-Amp	0.959	1
IDH1	18q-Del	0.959	1
IDH1	Del_17p12	0.959	1
ARID1A	Del_10q25.2	0.96	1
SOX9	14q-Del	0.96	1
SOX9	21q-Del	0.96	1
B2M	Amp_8q24.21	0.96	1
ACVR1B	Amp_8p11.21	0.96	1
FMN2	Del_15q22.33	0.96	1
MAPK6	20p-Amp	0.96	1
RHOA	Amp_20q11.21	0.96	1
FAM9A	8q-Amp	0.96	1
NF1	15q-Del	0.96	1
ERBB2	Amp_20q12	0.96	1
PTCH1	21q-Del	0.96	1
PIK3R1	Del_18p11.31	0.96	1
IFT57	Amp_20q11.21	0.96	1
ALDH1A3	20p-Amp	0.96	1
CDK12	Del_22q13.32	0.96	1
BIRC3	18p-Del	0.96	1
ATM	Del_4q35.1	0.96	1
IDH1	Del_4q35.1	0.96	1
CREBBP	Del_5q12.1	0.96	1
CTNNB1	Del_18q22.1	0.96	1
KDM6A	Del_15q11.2	0.96	1
Amp_20q13.31	Del_6q26	0.96	1
CRIPAK	8q-Amp	0.961	1
FAM123B	8q-Amp	0.961	1
FAM123B	Del_18p11.31	0.961	1
SOX9	Del_10q25.2	0.961	1
ACVR1B	Del_5q21.2	0.961	1
MLH1	Amp_13q12.2	0.961	1
SMAD2	8p-Del	0.961	1
WNT1	20p-Amp	0.961	1
FMN2	Amp_6p21.1	0.961	1
FMN2	Amp_17q24.1	0.961	1
FMN2	Del_15q15.2	0.961	1
FAM9A	20q-Amp	0.961	1
NF1	17p-Del	0.961	1
TPRKB	Amp_13q22.1	0.961	1
ERBB2	15q-Del	0.961	1
ALPK2	Del_15q15.2	0.961	1
PTCH1	Amp_11p15.5	0.961	1
PTCH1	Del_1p13.2	0.961	1
GRB2	20q-Amp	0.961	1
GRB2	Del_18q22.1	0.961	1
C11orf30	15q-Del	0.961	1
PRRG1	17p-Del	0.961	1
MPHOSPH10	Del_15q15.2	0.961	1
RB1	Del_21q11.2	0.961	1
PTEN	20q-Amp	0.961	1
SETD2	20p-Del	0.961	1
HIST1H1T	Amp_13q22.1	0.961	1
Amp_16p11.2	Del_5q21.2	0.961	1
ARID1A	Del_14q31.1	0.962	1
TP53	RHOA	0.962	1
SOX9	Del_18p11.31	0.962	1
CDH1	Amp_20p11.21	0.962	1
CDH1	Del_14q11.2	0.962	1
RHOA	Amp_8p11.21	0.962	1
RPTN	Amp_13q12.2	0.962	1
FBXW7	Del_1p13.2	0.962	1
ATXN3L	Del_21q11.2	0.962	1
ZBTB20	Del_15q22.33	0.962	1
IFT57	Amp_8p11.21	0.962	1
ROS1	8p-Del	0.962	1
SMAD4	Amp_17q12	0.962	1
RBBP7	Amp_13q12.2	0.962	1
SETD2	Del_14q31.1	0.962	1
NEXN	Del_21q11.2	0.962	1
BIRC3	8p-Del	0.962	1
Amp_12p13.32	Del_6p25.3	0.962	1
RNF43	Del_10q21.1	0.963	1
MLH1	1q-Amp	0.963	1
BCOR	8p-Amp	0.963	1
FMN2	Del_18q22.1	0.963	1
RPTN	Amp_13q22.1	0.963	1
PLAGL2	Amp_13q12.13	0.963	1
PRRG1	Amp_20p11.21	0.963	1
MPHOSPH10	Del_14q11.2	0.963	1
MPHOSPH10	Del_15q21.1	0.963	1
RBBP7	Amp_13q22.1	0.963	1
PTEN	17q-Amp	0.963	1
PTEN	Amp_13q12.13	0.963	1
BMPR2	Del_5q12.1	0.963	1
BIRC3	Amp_20p11.21	0.963	1
ATM	Amp_11p15.5	0.963	1
KDM6A	Amp_20p11.21	0.963	1
APC	Amp_6p21.1	0.964	1
FAM123B	Del_18q21.2	0.964	1
TXNDC2	Amp_8q24.21	0.964	1
CDH1	Del_8q11.1	0.964	1
MLH1	Del_4q22.1	0.964	1
FMN2	Del_15q21.1	0.964	1
FMN2	Del_22q13.32	0.964	1
FAM9A	Amp_20q11.21	0.964	1
PRKDC	IDH1	0.964	1
PRKDC	14q-Del	0.964	1
ERBB2	Del_18q21.2	0.964	1
ALPK2	Del_14q11.2	0.964	1
ALPK2	Del_15q21.1	0.964	1
GRB2	Del_18q21.2	0.964	1
C11orf30	Del_4q22.1	0.964	1
RLIM	Del_17p12	0.964	1
C2orf29	17p-Del	0.964	1
SMAD4	16q-Amp	0.964	1
RB1	Del_1p13.2	0.964	1
MAP4K3	Del_22q13.32	0.964	1
SETD2	8q-Amp	0.964	1
Amp_8p11.23	Del_1p33	0.964	1
ARID1A	4p-Del	0.965	1
ARID1A	Del_18p11.31	0.965	1
TP53	BMPR2	0.965	1
TXNDC2	Del_5q22.2	0.965	1
WNT1	Del_8p22	0.965	1
FMN2	20p-Amp	0.965	1
NF2	17p-Del	0.965	1
RPTN	Amp_8q12.1	0.965	1
NF1	Amp_20p11.21	0.965	1
PRRG1	Del_18q22.1	0.965	1
PIK3R1	Amp_13q12.2	0.965	1
PIK3R1	Amp_20q13.31	0.965	1
RB1	8q-Amp	0.965	1
HLA-A	Amp_8q12.1	0.965	1
SETD2	Del_8p22	0.965	1
CDK12	17p-Del	0.965	1
BIRC3	Del_18q22.1	0.965	1
1p-Del	Amp_8p11.23	0.965	1
Amp_12p13.32	Del_5q22.2	0.965	1
Amp_20p11.21	Del_6p25.3	0.965	1
CDH1	Del_8p22	0.966	1
CDH1	Del_14q31.1	0.966	1
SMAD2	Del_4q35.1	0.966	1
NF2	17q-Amp	0.966	1
MAPK6	Del_1p36.11	0.966	1
BCL9	Del_18q12.2	0.966	1
P2RY13	Del_18p11.31	0.966	1
NR1H3	Del_18p11.31	0.966	1
ROS1	Amp_16p11.2	0.966	1
C2orf29	Del_1p36.11	0.966	1
RB1	Amp_17q24.1	0.966	1
DCLK2	Del_18p11.31	0.966	1
FKBP9	Del_1p36.11	0.966	1
BMPR2	4p-Del	0.966	1
BMPR2	Del_3p14.2	0.966	1
FYN	Del_18q12.2	0.966	1
ALDH1A3	Del_1p36.11	0.966	1
LARP4B	8p-Del	0.966	1
PTGDR	17p-Del	0.966	1
CREBBP	21q-Del	0.966	1
7q-Amp	22q-Del	0.966	1
Amp_8q12.1	Del_16q23.1	0.966	1
TP53	FYN	0.967	1
FMN2	Del_6q26	0.967	1
FMN2	Del_14q31.1	0.967	1
OR4D10	7q-Amp	0.967	1
NF1	Del_18p11.31	0.967	1
ERBB2	Amp_11p15.5	0.967	1
ASXL1	Del_14q31.1	0.967	1
ALG12	Del_18p11.31	0.967	1
GRB2	Del_17p12	0.967	1
PRRG1	Amp_13q12.2	0.967	1
RB1	Del_15q15.2	0.967	1
TOP2B	15q-Del	0.967	1
PTEN	Del_18p11.31	0.967	1
SLC12A6	Amp_13q12.13	0.967	1
GMPS	7q-Amp	0.967	1
PRPS1	Del_18q12.2	0.967	1
PTGDR	Del_18q12.2	0.967	1
BIRC3	Amp_13q12.2	0.967	1
21q-Del	Amp_8p11.23	0.967	1
Amp_8p11.21	Del_16q23.1	0.967	1
RHOA	Amp_20q12	0.968	1
FAM9A	Amp_8q12.1	0.968	1
EGR1	13q-Amp	0.968	1
PRKDC	4p-Del	0.968	1
CHUK	8p-Del	0.968	1
ZBTB20	Del_21q11.2	0.968	1
ERBB2	20q-Amp	0.968	1
IQCD	Amp_20q12	0.968	1
NLRC4	Del_8p22	0.968	1
C11orf30	Amp_8q12.1	0.968	1
PRRG1	Amp_13q22.1	0.968	1
PRRG1	Del_18q21.2	0.968	1
PIK3R1	8p-Del	0.968	1
IFT57	Amp_20q12	0.968	1
SLC26A8	Del_15q15.2	0.968	1
PTEN	Amp_11p15.5	0.968	1
MAP4K3	Del_21q11.2	0.968	1
GMPS	13q-Amp	0.968	1
BIRC3	Del_18q21.2	0.968	1
ATM	Del_10q21.1	0.968	1
ATM	Del_10q25.2	0.968	1
CTNNB1	Amp_20p11.21	0.968	1
12p-Amp	18p-Del	0.968	1
Amp_8q24.21	Del_1p13.2	0.968	1
CDH1	20p-Amp	0.969	1
SMAD2	Del_22q13.32	0.969	1
SELPLG	Del_14q11.2	0.969	1
EGR1	20p-Amp	0.969	1
PRKDC	22q-Del	0.969	1
PRKDC	Del_12p13.1	0.969	1
MGA	Del_21q11.2	0.969	1
ALPK2	Del_15q11.2	0.969	1
RBBP7	Del_18q22.1	0.969	1
TOP2B	17p-Del	0.969	1
ATM	Amp_10q22.3	0.969	1
ATM	Del_15q21.1	0.969	1
CTNNB1	Amp_20q12	0.969	1
17q-Amp	Del_22q13.32	0.969	1
TP53	Amp_1q31.1	0.97	1
TP53	Del_1p36.11	0.97	1
FAM123B	Amp_8q24.21	0.97	1
SOX9	7q-Amp	0.97	1
ACVR1B	Amp_13q22.1	0.97	1
CDH1	8q-Amp	0.97	1
BCOR	Del_5q21.2	0.97	1
FMN2	Del_15q11.2	0.97	1
FMN2	Del_21q11.2	0.97	1
STARD3NL	8p-Del	0.97	1
STARD3NL	Del_17p12	0.97	1
NF2	Amp_17q12	0.97	1
NF2	Del_10q25.2	0.97	1
RPTN	Amp_13q12.13	0.97	1
NF1	18q-Del	0.97	1
FBXW7	Amp_20p11.21	0.97	1
ERBB2	12p-Amp	0.97	1
P2RY13	8p-Del	0.97	1
P2RY13	Del_17p12	0.97	1
NR1H3	8p-Del	0.97	1
GRB2	18p-Del	0.97	1
PCBP1	8p-Del	0.97	1
RLIM	Amp_20p11.21	0.97	1
ROS1	Del_5q12.1	0.97	1
ROS1	Del_8p23.2	0.97	1
RBBP7	Amp_13q12.13	0.97	1
RB1	Del_17q24.3	0.97	1
L1TD1	Del_18p11.31	0.97	1
DCLK2	8p-Del	0.97	1
DCLK2	Del_17p12	0.97	1
C14orf184	Del_17p12	0.97	1
BMPR2	Del_22q13.32	0.97	1
FYN	8p-Del	0.97	1
FYN	Del_17p12	0.97	1
LARP4B	Del_15q15.2	0.97	1
GPATCH8	8p-Del	0.97	1
KDM6A	20p-Amp	0.97	1
1p-Del	Amp_20p11.21	0.97	1
ARID1A	Del_1p33	0.971	1
CDH1	1p-Del	0.971	1
FMN2	8p-Amp	0.971	1
FMN2	Del_17p12	0.971	1
SELPLG	Del_14q31.1	0.971	1
NF2	Amp_6p21.1	0.971	1
NF2	Del_3p26.3	0.971	1
FAM9A	Amp_20q12	0.971	1
FBXW7	15q-Del	0.971	1
IQCD	18q-Del	0.971	1
PTCH1	7q-Amp	0.971	1
IFT57	18q-Del	0.971	1
C2orf29	Del_14q31.1	0.971	1
SLC26A8	Amp_8p11.23	0.971	1
RB1	Del_15q21.1	0.971	1
L1TD1	Amp_8p11.23	0.971	1
TOP2B	Amp_13q22.1	0.971	1
FKBP9	Del_14q31.1	0.971	1
SETD2	17p-Del	0.971	1
SETD2	Del_4p16.2	0.971	1
BIRC3	Amp_8p11.21	0.971	1
ZNF486	18q-Del	0.971	1
SMAD2	Amp_20q11.21	0.972	1
STARD3NL	17p-Del	0.972	1
MAPK6	8q-Amp	0.972	1
CHUK	Del_8p22	0.972	1
ERBB2	Amp_20q13.31	0.972	1
PLEKHF2	7p-Amp	0.972	1
NR1H3	17p-Del	0.972	1
ASXL1	Amp_20p11.21	0.972	1
ALG12	18p-Del	0.972	1
C2orf29	8q-Amp	0.972	1
SLC26A8	Del_15q11.2	0.972	1
L1TD1	8q-Amp	0.972	1
FYN	17p-Del	0.972	1
Amp_20q11.21	Del_6q26	0.972	1
APC	Del_17q24.3	0.973	1
TP53	NLRC4	0.973	1
FAM123B	Amp_8p11.21	0.973	1
SOX9	Del_10q23.31	0.973	1
SMAD2	14q-Del	0.973	1
WNT1	Amp_20p11.21	0.973	1
MGA	Del_1p33	0.973	1
P2RY13	18p-Del	0.973	1
NR1H3	18p-Del	0.973	1
NR1H3	Amp_20q13.31	0.973	1
ALPK2	Del_15q22.33	0.973	1
NLRC4	Del_5q22.2	0.973	1
C11orf30	Del_15q22.33	0.973	1
PRRG1	Amp_13q12.13	0.973	1
C2orf29	Amp_20q13.31	0.973	1
SMAD4	20q-Amp	0.973	1
SLC26A8	7p-Amp	0.973	1
RB1	15q-Del	0.973	1
RB1	Del_15q22.33	0.973	1
TOP2B	13q-Amp	0.973	1
PTEN	20p-Amp	0.973	1
PTEN	Amp_6p21.1	0.973	1
PTEN	Del_4q35.1	0.973	1
BMPR2	7q-Amp	0.973	1
LARP4B	Del_4p16.2	0.973	1
SLC12A6	7q-Amp	0.973	1
NEXN	Del_15q15.2	0.973	1
BIRC3	Amp_13q12.13	0.973	1
ATM	15q-Del	0.973	1
1p-Del	Amp_8q12.1	0.973	1
Amp_8p11.23	Del_10q23.31	0.973	1
Amp_20p11.21	Del_16q23.1	0.973	1
ARID1A	Amp_17q12	0.974	1
ARID1A	Amp_20p11.21	0.974	1
TP53	FKBP9	0.974	1
FAM123B	Amp_16p11.2	0.974	1
BCOR	Del_17p12	0.974	1
FMN2	15q-Del	0.974	1
NF2	13q-Amp	0.974	1
RHOA	Amp_20q13.31	0.974	1
FAM9A	Amp_13q12.2	0.974	1
IQCD	Amp_20q13.31	0.974	1
C11orf30	Del_22q13.32	0.974	1
DIP2B	Del_8p22	0.974	1
PIK3R1	20p-Del	0.974	1
IFT57	Amp_8q24.21	0.974	1
IFT57	Amp_20q13.31	0.974	1
ROS1	Amp_20p11.21	0.974	1
RBPJ	Del_8p22	0.974	1
PTEN	Del_15q21.1	0.974	1
HLA-A	7q-Amp	0.974	1
HLA-A	Del_8p23.2	0.974	1
SETD2	22q-Del	0.974	1
NEXN	Del_15q21.1	0.974	1
IDH1	Del_8p23.2	0.974	1
8p-Amp	Del_4q22.1	0.974	1
Amp_17q12	Del_10q25.2	0.974	1
ARID1A	Del_16p13.3	0.975	1
NF2	Del_6q26	0.975	1
FAM9A	Amp_13q22.1	0.975	1
PRKDC	Amp_17q12	0.975	1
NF1	Amp_11p15.5	0.975	1
NF1	Del_1p13.2	0.975	1
TPRKB	18q-Del	0.975	1
BCL9	15q-Del	0.975	1
ERBB2	Del_15q22.33	0.975	1
IFT57	Del_8p23.2	0.975	1
TOP2B	Del_4q35.1	0.975	1
PTEN	9p-Amp	0.975	1
PTEN	18p-Del	0.975	1
FYN	Amp_20p11.21	0.975	1
LARP4B	22q-Del	0.975	1
LARP4B	Del_15q11.2	0.975	1
SETD2	Amp_17q24.1	0.975	1
BIRC3	20q-Amp	0.975	1
ATM	4q-Del	0.975	1
ATM	Amp_17q24.1	0.975	1
ZNF486	Del_8p23.2	0.975	1
CREBBP	Amp_17q24.1	0.975	1
21q-Del	Amp_8p11.21	0.975	1
ARID1A	7q-Amp	0.976	1
RNF43	Del_10q25.2	0.976	1
FAM123B	Del_1p13.2	0.976	1
SOX9	4q-Del	0.976	1
CDH1	Amp_17q12	0.976	1
MLH1	Amp_13q12.13	0.976	1
NF2	20p-Amp	0.976	1
FAM9A	Amp_20q13.31	0.976	1
ASXL1	Del_8p23.2	0.976	1
ALG12	Amp_13q22.1	0.976	1
KDM6A	Amp_20q13.31	0.976	1
ARID1A	13q-Amp	0.977	1
TP53	MAP4K3	0.977	1
TP53	SETD2	0.977	1
SOX9	Del_15q15.2	0.977	1
B2M	8p-Del	0.977	1
CDH1	17p-Del	0.977	1
PRKDC	Amp_1q31.1	0.977	1
CHUK	Del_21q11.2	0.977	1
ALPK2	22q-Del	0.977	1
NLRC4	Del_4q22.1	0.977	1
C11orf30	14q-Del	0.977	1
PIK3R1	8p-Amp	0.977	1
PIK3R1	Amp_13q12.13	0.977	1
ROS1	Del_17q24.3	0.977	1
RBPJ	8p-Del	0.977	1
RB1	Del_6q26	0.977	1
RB1	Del_19p13.3	0.977	1
TOP2B	Del_15q22.33	0.977	1
PTEN	Amp_13q22.1	0.977	1
CDK12	18p-Del	0.977	1
GMPS	8p-Del	0.977	1
PRPS1	Del_18q22.1	0.977	1
CREBBP	Del_6q26	0.977	1
CTNNB1	Amp_13q12.2	0.977	1
KDM6A	7q-Amp	0.977	1
APC	2q-Amp	0.978	1
ARID1A	Amp_8q24.21	0.978	1
ARID1A	Del_17q24.3	0.978	1
CRIPAK	18p-Del	0.978	1
SOX9	Del_15q21.1	0.978	1
MLH1	17p-Del	0.978	1
NF2	Del_15q15.2	0.978	1
PRKDC	Del_19p13.3	0.978	1
NF1	Del_17q24.3	0.978	1
BCL9	8q-Amp	0.978	1
ZBTB20	Del_15q15.2	0.978	1
P2RY13	Amp_13q12.2	0.978	1
IQCD	Del_18q12.2	0.978	1
NR1H3	Amp_13q12.2	0.978	1
NR1H3	Del_18q22.1	0.978	1
PTCH1	20p-Del	0.978	1
DIP2B	Amp_8p11.21	0.978	1
PCBP1	Amp_8p11.21	0.978	1
IFT57	8q-Amp	0.978	1
IFT57	Del_18q12.2	0.978	1
RBBP7	13q-Amp	0.978	1
RBBP7	20p-Amp	0.978	1
L1TD1	18p-Del	0.978	1
TOP2B	Del_22q13.32	0.978	1
PTEN	14q-Del	0.978	1
PTEN	Del_3q26.31	0.978	1
FYN	Amp_8p11.21	0.978	1
FYN	Del_18q22.1	0.978	1
BIRC3	Amp_20q11.21	0.978	1
ATM	Del_15q11.2	0.978	1
ZNF486	Del_18q12.2	0.978	1
CTNNB1	Amp_13q12.13	0.978	1
20p-Amp	Del_16q23.1	0.978	1
22q-Del	Amp_12p13.32	0.978	1
ARID1A	8p-Del	0.979	1
ARID1A	Del_3q26.31	0.979	1
CDH1	Del_1p36.11	0.979	1
MLH1	8q-Amp	0.979	1
SMAD2	Amp_20q12	0.979	1
NF2	1q-Amp	0.979	1
PRKDC	Del_4q35.1	0.979	1
NF1	Del_17p12	0.979	1
P2RY13	Amp_13q22.1	0.979	1
IQCD	13q-Amp	0.979	1
PLEKHF2	Del_17p12	0.979	1
NR1H3	Amp_13q22.1	0.979	1
ALPK2	14q-Del	0.979	1
PIK3R1	Del_8p23.2	0.979	1
IFT57	20p-Amp	0.979	1
MPHOSPH10	7q-Amp	0.979	1
SMAD4	18p-Del	0.979	1
SMAD4	Amp_17q24.1	0.979	1
DCLK2	Amp_13q22.1	0.979	1
MAP4K3	Del_14q11.2	0.979	1
SLC12A6	7p-Amp	0.979	1
PRPS1	Del_18q21.2	0.979	1
PTGDR	Del_18q21.2	0.979	1
IDH1	Del_14q11.2	0.979	1
ZNF486	13q-Amp	0.979	1
ZNF486	7p-Amp	0.979	1
CREBBP	Del_1p36.11	0.979	1
KDM6A	Del_18p11.31	0.979	1
Amp_20q12	Del_6q26	0.979	1
TP53	ST3GAL6	0.98	1
SOX9	Amp_8p11.23	0.98	1
SOX9	Del_14q31.1	0.98	1
B2M	17p-Del	0.98	1
CDH1	Del_17q24.3	0.98	1
MLH1	Del_14q31.1	0.98	1
OR4D10	Del_17p12	0.98	1
CHUK	18q-Del	0.98	1
BCL9	18p-Del	0.98	1
PTCH1	Amp_17q12	0.98	1
NLRC4	Amp_8q24.21	0.98	1
MPHOSPH10	Amp_20q12	0.98	1
SMAD4	16p-Amp	0.98	1
SLC26A8	Amp_8q12.1	0.98	1
RBBP7	18q-Del	0.98	1
L1TD1	Amp_8q12.1	0.98	1
TOP2B	14q-Del	0.98	1
PTEN	13q-Amp	0.98	1
PTEN	Amp_20q12	0.98	1
MAP4K3	Del_14q31.1	0.98	1
SLC12A6	Amp_8q24.21	0.98	1
CDK12	Amp_20p11.21	0.98	1
ATM	5q-Del	0.98	1
KDM6A	Del_4q22.1	0.98	1
Amp_8p11.21	Del_1p33	0.98	1
TP53	MVK	0.981	1
CDH1	Amp_20q11.21	0.981	1
SMAD2	Del_15q15.2	0.981	1
FMN2	Amp_20p11.21	0.981	1
PRKDC	Del_1p36.11	0.981	1
FBXW7	17p-Del	0.981	1
MGA	Del_1p36.11	0.981	1
TPRKB	Del_18q12.2	0.981	1
BCL9	18q-Del	0.981	1
PTCH1	Del_21q11.2	0.981	1
MPHOSPH10	Del_8p23.2	0.981	1
RB1	Amp_20p11.21	0.981	1
PTEN	Del_19p13.3	0.981	1
FYN	Del_18q21.2	0.981	1
CDK12	22q-Del	0.981	1
ATM	13q-Amp	0.981	1
CTNNB1	13q-Amp	0.981	1
7q-Amp	Del_16q23.1	0.981	1
RNF43	Del_21q11.2	0.982	1
FAM123B	13q-Amp	0.982	1
FAM123B	17p-Del	0.982	1
FAM123B	4p-Del	0.982	1
SOX9	Del_15q11.2	0.982	1
CDH1	Amp_8q24.21	0.982	1
CDH1	Del_21q11.2	0.982	1
MLH1	Del_17p12	0.982	1
SMAD2	Del_14q11.2	0.982	1
SMAD2	Del_15q21.1	0.982	1
NF2	Del_8p23.2	0.982	1
NF2	Del_17p12	0.982	1
EGR1	Amp_20p11.21	0.982	1
NF1	Del_6q26	0.982	1
NF1	Del_18q21.2	0.982	1
BCL9	Del_4q35.1	0.982	1
P2RY13	Amp_13q12.13	0.982	1
NR1H3	Amp_13q12.13	0.982	1
ASXL1	13q-Amp	0.982	1
NLRC4	Amp_20p11.21	0.982	1
ROS1	20p-Del	0.982	1
SMAD4	20p-Del	0.982	1
HLA-A	8p-Del	0.982	1
SLC12A6	17p-Del	0.982	1
6p-Amp	Del_17p12	0.982	1
8p-Amp	Del_4q35.1	0.982	1
18p-Del	Amp_12p13.32	0.982	1
TP53	DDX26B	0.983	1
FAM123B	20p-Amp	0.983	1
B2M	Amp_8p11.21	0.983	1
CDH1	Amp_20q13.31	0.983	1
SMAD2	Del_14q31.1	0.983	1
NF2	Amp_13q12.2	0.983	1
ERBB2	Del_18q12.2	0.983	1
IQCD	Del_8p22	0.983	1
IFT57	Amp_8q12.1	0.983	1
IFT57	Del_8p22	0.983	1
RLIM	Del_18q21.2	0.983	1
C2orf29	20q-Amp	0.983	1
DDX26B	Amp_8p11.21	0.983	1
SLC26A8	7q-Amp	0.983	1
SLC26A8	Amp_13q22.1	0.983	1
RB1	Del_4p16.2	0.983	1
FKBP9	7q-Amp	0.983	1
PTEN	Del_4q22.1	0.983	1
BIRC3	Amp_20q12	0.983	1
ATM	Amp_13q12.2	0.983	1
ATM	Del_4p16.2	0.983	1
ZNF486	Del_8p22	0.983	1
CREBBP	Del_15q21.1	0.983	1
KDM6A	Del_17p12	0.983	1
12p-Amp	Del_17p12	0.983	1
8p-Amp	Del_4p16.2	0.983	1
Amp_8p11.23	Del_1p13.2	0.983	1
Amp_12p13.32	Del_14q11.2	0.983	1
MLH1	Del_21q11.2	0.984	1
SMAD2	Del_15q11.2	0.984	1
RHOA	Del_18p11.31	0.984	1
FAM9A	17p-Del	0.984	1
EGR1	Amp_13q12.2	0.984	1
FBXW7	Del_18q12.2	0.984	1
MGA	Del_1p13.2	0.984	1
ERBB2	8p-Amp	0.984	1
PLEKHF2	Amp_13q12.2	0.984	1
ALG12	18q-Del	0.984	1
PTCH1	Amp_13q12.2	0.984	1
GRB2	17p-Del	0.984	1
C11orf30	Amp_20p11.21	0.984	1
DIP2B	Del_8p23.2	0.984	1
PIK3R1	Amp_1q31.1	0.984	1
PIK3R1	Amp_17q24.1	0.984	1
MPHOSPH10	13q-Amp	0.984	1
SMAD4	Del_3p26.3	0.984	1
BMPR2	8p-Del	0.984	1
BMPR2	Del_4p16.2	0.984	1
MAP4K3	7p-Amp	0.984	1
SETD2	4q-Del	0.984	1
BIRC3	8q-Amp	0.984	1
12p-Amp	Del_14q11.2	0.984	1
1q-Amp	Del_21q11.2	0.984	1
FAM123B	Amp_13q12.2	0.985	1
BCOR	Del_4q22.1	0.985	1
SMAD2	13q-Amp	0.985	1
SMAD2	Amp_20q13.31	0.985	1
OR4D10	Amp_13q12.2	0.985	1
MAPK6	Amp_20q11.21	0.985	1
PRKDC	Del_14q11.2	0.985	1
NF1	20q-Amp	0.985	1
NF1	20p-Del	0.985	1
NF1	Del_4q22.1	0.985	1
NF1	Del_18q22.1	0.985	1
FBXW7	5q-Del	0.985	1
CHUK	Amp_8q24.21	0.985	1
CHUK	Del_14q11.2	0.985	1
MGA	Del_5q12.1	0.985	1
BCL9	Amp_8q12.1	0.985	1
PTCH1	Amp_13q22.1	0.985	1
NLRC4	Amp_13q12.2	0.985	1
NLRC4	Amp_13q22.1	0.985	1
C11orf30	Del_14q11.2	0.985	1
PIK3R1	13q-Amp	0.985	1
PIK3R1	Amp_13q22.1	0.985	1
RSPH3	18q-Del	0.985	1
LARP4B	Del_5q22.2	0.985	1
BCORL1	Amp_13q12.2	0.985	1
MAP4K3	Del_18p11.31	0.985	1
NEXN	18p-Del	0.985	1
ATM	Del_1p13.2	0.985	1
CREBBP	Del_14q31.1	0.985	1
CTNNB1	Del_18p11.31	0.985	1
KDM6A	Del_4q35.1	0.985	1
8p-Amp	22q-Del	0.985	1
FAM123B	14q-Del	0.986	1
FMN2	Del_17q24.3	0.986	1
STARD3NL	20q-Amp	0.986	1
OR4D10	Amp_13q22.1	0.986	1
NF2	7q-Amp	0.986	1
RHOA	Del_18q22.1	0.986	1
NF1	Del_14q31.1	0.986	1
FBXW7	Amp_11p15.5	0.986	1
FBXW7	Del_1p33	0.986	1
IQCD	Del_17p12	0.986	1
IQCD	Del_18q22.1	0.986	1
NR1H3	20q-Amp	0.986	1
NLRC4	14q-Del	0.986	1
NLRC4	Del_21q11.2	0.986	1
C11orf30	Del_14q31.1	0.986	1
PIK3R1	20p-Amp	0.986	1
IFT57	Del_17p12	0.986	1
IFT57	Del_18q22.1	0.986	1
SMAD4	1p-Del	0.986	1
RBBP7	17p-Del	0.986	1
RBBP7	Del_18q12.2	0.986	1
RB1	21q-Del	0.986	1
L1TD1	Amp_8q24.21	0.986	1
TOP2B	Del_1p36.11	0.986	1
HLA-A	Del_17p12	0.986	1
FYN	20q-Amp	0.986	1
CDK12	Del_8p22	0.986	1
GMPS	Amp_13q22.1	0.986	1
BIRC3	13q-Amp	0.986	1
ATM	Del_17q24.3	0.986	1
ATM	Del_22q13.32	0.986	1
CREBBP	Del_15q11.2	0.986	1
CREBBP	Del_21q11.2	0.986	1
KDM6A	18p-Del	0.986	1
SOX9	Amp_17q12	0.987	1
ACVR1B	Amp_20p11.21	0.987	1
ACVR1B	Del_8p23.2	0.987	1
EGR1	Amp_13q12.13	0.987	1
PRKDC	Del_21q11.2	0.987	1
RPTN	Amp_8p11.21	0.987	1
NF1	Del_8q11.1	0.987	1
CHUK	Del_8p23.2	0.987	1
CHUK	Del_18q12.2	0.987	1
TPRKB	Del_18q22.1	0.987	1
PLEKHF2	Amp_13q12.13	0.987	1
ALG12	Del_18q12.2	0.987	1
NLRC4	20p-Amp	0.987	1
C11orf30	Del_8p23.2	0.987	1
DIP2B	20q-Amp	0.987	1
DIP2B	7q-Amp	0.987	1
PRRG1	Del_18q12.2	0.987	1
PIK3R1	Amp_20q12	0.987	1
RLIM	18q-Del	0.987	1
ROS1	Amp_13q12.13	0.987	1
ROS1	Del_1p36.11	0.987	1
FKBP9	Del_8p23.2	0.987	1
HLA-A	Amp_8p11.21	0.987	1
MAP4K3	18q-Del	0.987	1
SETD2	Amp_11p15.5	0.987	1
SETD2	Del_1p13.2	0.987	1
SETD2	Del_8p23.2	0.987	1
SLC12A6	20p-Amp	0.987	1
CDK12	Del_18p11.31	0.987	1
BIRC3	Amp_20q13.31	0.987	1
CREBBP	15q-Del	0.987	1
12p-Amp	Del_15q11.2	0.987	1
Amp_8p11.23	Del_22q13.32	0.987	1
ARID1A	Del_8p22	0.988	1
ARID1A	Del_17p12	0.988	1
CRIPAK	Amp_20q12	0.988	1
FAM123B	Del_8p23.2	0.988	1
SOX9	Amp_13q12.13	0.988	1
STARD3NL	7p-Amp	0.988	1
STARD3NL	Amp_20q11.21	0.988	1
NF2	Amp_11p15.5	0.988	1
NF2	Del_1p13.2	0.988	1
RHOA	18p-Del	0.988	1
RHOA	Del_18q21.2	0.988	1
NF1	Amp_20q13.31	0.988	1
NF1	Del_15q11.2	0.988	1
NF1	Del_18q12.2	0.988	1
TPRKB	Del_18q21.2	0.988	1
ERBB2	Del_1p36.11	0.988	1
IQCD	Del_18q21.2	0.988	1
NR1H3	Amp_20q11.21	0.988	1
ALPK2	Del_1p13.2	0.988	1
ALPK2	Del_8p22	0.988	1
PTCH1	Del_10q25.2	0.988	1
PTCH1	Del_14q31.1	0.988	1
PCBP1	7p-Amp	0.988	1
PCBP1	8q-Amp	0.988	1
IFT57	18p-Del	0.988	1
IFT57	Del_18q21.2	0.988	1
MPHOSPH10	Del_8p22	0.988	1
SMAD4	Del_17p12	0.988	1
TOP2B	20q-Amp	0.988	1
TOP2B	Del_14q11.2	0.988	1
FYN	8q-Amp	0.988	1
FYN	Amp_20q11.21	0.988	1
MAP4K3	Del_17p12	0.988	1
SETD2	7p-Amp	0.988	1
SETD2	Del_5q12.1	0.988	1
CDK12	Amp_13q12.13	0.988	1
ATM	17p-Del	0.988	1
ZNF486	18p-Del	0.988	1
ZNF486	Del_18q21.2	0.988	1
CREBBP	7q-Amp	0.988	1
CTNNB1	18p-Del	0.988	1
KDM6A	14q-Del	0.988	1
KDM6A	Amp_20q12	0.988	1
KDM6A	Del_18q22.1	0.988	1
KDM6A	Del_21q11.2	0.988	1
8p-Amp	14q-Del	0.988	1
ARID1A	Del_3p26.3	0.989	1
RNF43	Amp_11p15.5	0.989	1
RNF43	Del_1p13.2	0.989	1
SOX9	17p-Del	0.989	1
ACVR1B	Amp_13q12.2	0.989	1
SMAD2	20q-Amp	0.989	1
SMAD2	Del_18q22.1	0.989	1
STARD3NL	Del_8p23.2	0.989	1
OR4D10	Amp_13q12.13	0.989	1
NF2	21q-Del	0.989	1
MAPK6	Amp_20q12	0.989	1
FAM9A	Del_18q12.2	0.989	1
EGR1	17p-Del	0.989	1
PRKDC	17p-Del	0.989	1
FBXW7	Del_15q11.2	0.989	1
ZBTB20	7q-Amp	0.989	1
ERBB2	18q-Del	0.989	1
ERBB2	Amp_20q11.21	0.989	1
P2RY13	18q-Del	0.989	1
NR1H3	18q-Del	0.989	1
ASXL1	Amp_20q11.21	0.989	1
NLRC4	Amp_8p11.21	0.989	1
NLRC4	Amp_13q12.13	0.989	1
C11orf30	17p-Del	0.989	1
DIP2B	Amp_20q11.21	0.989	1
IFT57	20q-Amp	0.989	1
RSPH3	Del_18q12.2	0.989	1
RLIM	Del_18p11.31	0.989	1
ROS1	Amp_1q31.1	0.989	1
ROS1	Amp_17q24.1	0.989	1
C2orf29	Amp_20q12	0.989	1
DDX26B	Amp_13q12.13	0.989	1
SLC26A8	8p-Del	0.989	1
RB1	20p-Amp	0.989	1
RB1	Del_10q25.2	0.989	1
L1TD1	8p-Del	0.989	1
TOP2B	Del_14q31.1	0.989	1
PTEN	Del_14q31.1	0.989	1
PTEN	Del_18q22.1	0.989	1
BCORL1	Amp_13q12.13	0.989	1
GPATCH8	Del_8p23.2	0.989	1
MAP4K3	7q-Amp	0.989	1
SETD2	4p-Del	0.989	1
CDK12	Del_5q22.2	0.989	1
BIRC3	Del_8p22	0.989	1
ZNF486	20q-Amp	0.989	1
KDM6A	Amp_13q12.2	0.989	1
7q-Amp	Del_10q23.31	0.989	1
22q-Del	Amp_8p11.23	0.989	1
ARID1A	Amp_13q12.13	0.99	1
ARID1A	Amp_13q12.2	0.99	1
SOX9	8q-Amp	0.99	1
CDH1	Amp_20q12	0.99	1
NF2	Amp_13q12.13	0.99	1
PRKDC	Amp_11p15.5	0.99	1
PRKDC	Del_1p13.2	0.99	1
PRKDC	Del_4q22.1	0.99	1
NF1	1p-Del	0.99	1
FBXW7	Del_4q22.1	0.99	1
TPRKB	20p-Amp	0.99	1
ERBB2	Del_18p11.31	0.99	1
IQCD	Amp_13q12.2	0.99	1
IQCD	Amp_13q22.1	0.99	1
IQCD	Amp_20q11.21	0.99	1
ALPK2	7p-Amp	0.99	1
ASXL1	Amp_13q12.2	0.99	1
ASXL1	Del_18p11.31	0.99	1
C11orf30	20p-Amp	0.99	1
PRRG1	Del_18p11.31	0.99	1
ROS1	13q-Amp	0.99	1
RB1	Del_17p12	0.99	1
L1TD1	20p-Amp	0.99	1
TOP2B	Amp_13q12.2	0.99	1
TOP2B	Amp_20q11.21	0.99	1
MAP4K3	18p-Del	0.99	1
SETD2	13q-Amp	0.99	1
SETD2	Del_15q11.2	0.99	1
CDK12	Del_4q22.1	0.99	1
NEXN	20q-Amp	0.99	1
ZNF486	Amp_13q12.2	0.99	1
ARID1A	Amp_13q22.1	0.991	1
ARID1A	Del_8p23.2	0.991	1
RNF43	Amp_8q24.21	0.991	1
FAM123B	Amp_13q12.13	0.991	1
SOX9	7p-Amp	0.991	1
SOX9	Amp_8p11.21	0.991	1
SOX9	Del_21q11.2	0.991	1
SMAD2	18q-Del	0.991	1
STARD3NL	Amp_20q12	0.991	1
NF2	7p-Amp	0.991	1
EGR1	18q-Del	0.991	1
PRKDC	Del_8p22	0.991	1
FBXW7	4p-Del	0.991	1
FBXW7	Del_12p13.1	0.991	1
CHUK	Amp_20q13.31	0.991	1
BCL9	Del_18p11.31	0.991	1
P2RY13	20p-Amp	0.991	1
PLEKHF2	18q-Del	0.991	1
NR1H3	Amp_20q12	0.991	1
ALPK2	Del_14q31.1	0.991	1
ASXL1	Amp_13q22.1	0.991	1
ALG12	Del_18q21.2	0.991	1
ALG12	Del_18q22.1	0.991	1
PTCH1	17p-Del	0.991	1
PRRG1	Del_17p12	0.991	1
PCBP1	Amp_8q12.1	0.991	1
RLIM	Del_18q12.2	0.991	1
ROS1	20p-Amp	0.991	1
ROS1	Amp_13q12.2	0.991	1
MPHOSPH10	20q-Amp	0.991	1
VCX2	ATM	0.991	1
DDX26B	8q-Amp	0.991	1
RB1	Del_18p11.31	0.991	1
FYN	Amp_8q12.1	0.991	1
FYN	Amp_20q12	0.991	1
BCORL1	Del_18p11.31	0.991	1
MAP4K3	Del_18q12.2	0.991	1
SETD2	Amp_17q12	0.991	1
CTNNB1	20q-Amp	0.991	1
12p-Amp	Del_15q22.33	0.991	1
12p-Amp	Del_18p11.31	0.991	1
ARID1A	Amp_1q31.1	0.992	1
CRIPAK	20q-Amp	0.992	1
CRIPAK	14q-Del	0.992	1
TP53	Amp_11p15.5	0.992	1
B2M	7p-Amp	0.992	1
B2M	Del_8p23.2	0.992	1
ACVR1B	Amp_13q12.13	0.992	1
MLH1	Amp_13q22.1	0.992	1
BCOR	14q-Del	0.992	1
MAPK6	Amp_20q13.31	0.992	1
PRKDC	Del_17q24.3	0.992	1
NF1	Del_15q15.2	0.992	1
MGA	Del_22q13.32	0.992	1
TPRKB	Del_18p11.31	0.992	1
ZBTB20	Amp_13q12.2	0.992	1
P2RY13	Del_18q12.2	0.992	1
IQCD	Amp_13q12.13	0.992	1
NR1H3	Del_18q12.2	0.992	1
PTCH1	13q-Amp	0.992	1
PTCH1	Amp_13q12.13	0.992	1
NLRC4	Amp_8p11.23	0.992	1
NLRC4	Del_14q11.2	0.992	1
NLRC4	Del_14q31.1	0.992	1
PRRG1	18p-Del	0.992	1
PIK3R1	Amp_11p15.5	0.992	1
RSPH3	20q-Amp	0.992	1
RLIM	18p-Del	0.992	1
ROS1	17p-Del	0.992	1
RBPJ	Del_8p23.2	0.992	1
RB1	5q-Del	0.992	1
RB1	Del_3q26.31	0.992	1
L1TD1	Amp_8p11.21	0.992	1
TOP2B	8q-Amp	0.992	1
FKBP9	Del_8p22	0.992	1
PTEN	Del_17q24.3	0.992	1
LARP4B	7p-Amp	0.992	1
MAP4K3	Amp_13q12.2	0.992	1
SLC12A6	Del_14q11.2	0.992	1
SLC12A6	Del_14q31.1	0.992	1
NEXN	Amp_20q11.21	0.992	1
NEXN	Del_18q22.1	0.992	1
GMPS	Del_8p23.2	0.992	1
ATM	Del_15q22.33	0.992	1
ZNF486	Amp_13q12.13	0.992	1
ZNF486	Amp_20q12	0.992	1
ARID1A	17p-Del	0.993	1
SOX9	Del_5q21.2	0.993	1
ACVR1B	Del_15q15.2	0.993	1
ACVR1B	Del_15q21.1	0.993	1
CDH1	21q-Del	0.993	1
STARD3NL	Amp_20q13.31	0.993	1
STARD3NL	Del_8p22	0.993	1
NF2	Amp_13q22.1	0.993	1
MAPK6	Del_18p11.31	0.993	1
FAM9A	Del_8p23.2	0.993	1
NF1	Del_15q21.1	0.993	1
CHUK	Del_18q22.1	0.993	1
BCL9	Del_17p12	0.993	1
IQCD	17p-Del	0.993	1
ALPK2	13q-Amp	0.993	1
GRB2	Del_8p23.2	0.993	1
NLRC4	Amp_20q12	0.993	1
DIP2B	14q-Del	0.993	1
DIP2B	Amp_20q12	0.993	1
RSPH3	Del_18q22.1	0.993	1
MPHOSPH10	Amp_20q11.21	0.993	1
RBBP7	Del_18q21.2	0.993	1
L1TD1	17p-Del	0.993	1
TOP2B	Amp_13q12.13	0.993	1
TOP2B	Amp_20q12	0.993	1
FKBP9	17p-Del	0.993	1
PTEN	Del_3p26.3	0.993	1
BMPR2	Del_4q22.1	0.993	1
FYN	Amp_20q13.31	0.993	1
LARP4B	14q-Del	0.993	1
BCORL1	Del_17p12	0.993	1
GPATCH8	Del_8p22	0.993	1
SETD2	Del_4q35.1	0.993	1
GMPS	20q-Amp	0.993	1
IDH1	8p-Del	0.993	1
KDM6A	Del_14q11.2	0.993	1
KDM6A	Del_15q15.2	0.993	1
KDM6A	Del_15q21.1	0.993	1
12p-Amp	14q-Del	0.993	1
20p-Amp	Del_6q26	0.993	1
6p-Amp	Del_18q12.2	0.993	1
Amp_12p13.32	Del_18p11.31	0.993	1
APC	6p-Amp	0.994	1
ARID1A	18q-Del	0.994	1
CRIPAK	Amp_20q11.21	0.994	1
TP53	SOX9	0.994	1
FAM123B	Amp_13q22.1	0.994	1
FAM123B	Del_17p12	0.994	1
SOX9	Amp_8q12.1	0.994	1
SOX9	Amp_13q22.1	0.994	1
SOX9	Del_18q21.2	0.994	1
ACVR1B	Del_15q11.2	0.994	1
SMAD2	Del_18q12.2	0.994	1
OR4D10	13q-Amp	0.994	1
NF2	Del_15q21.1	0.994	1
EGR1	Del_18q12.2	0.994	1
NF1	Amp_20q11.21	0.994	1
FBXW7	20p-Amp	0.994	1
FBXW7	Del_10q25.2	0.994	1
CHUK	20q-Amp	0.994	1
CHUK	Del_18q21.2	0.994	1
TPRKB	18p-Del	0.994	1
BCL9	Del_18q22.1	0.994	1
ZBTB20	Amp_13q12.13	0.994	1
ERBB2	20p-Amp	0.994	1
ERBB2	18p-Del	0.994	1
PLEKHF2	Del_18q12.2	0.994	1
NR1H3	Del_17p12	0.994	1
ASXL1	20q-Amp	0.994	1
ASXL1	18p-Del	0.994	1
ASXL1	Amp_20q12	0.994	1
C11orf30	Del_17p12	0.994	1
PIK3R1	20q-Amp	0.994	1
PIK3R1	Amp_8p11.21	0.994	1
RSPH3	Del_18q21.2	0.994	1
ROS1	Del_8p22	0.994	1
ROS1	Del_21q11.2	0.994	1
MPHOSPH10	Amp_13q12.2	0.994	1
MPHOSPH10	Amp_13q22.1	0.994	1
C2orf29	Del_17p12	0.994	1
DDX26B	13q-Amp	0.994	1
DDX26B	20p-Amp	0.994	1
DDX26B	Amp_8q12.1	0.994	1
RBBP7	7p-Amp	0.994	1
L1TD1	Del_17p12	0.994	1
PTEN	Del_18q21.2	0.994	1
HLA-A	7p-Amp	0.994	1
HLA-A	Amp_8q24.21	0.994	1
BCORL1	18p-Del	0.994	1
MAP4K3	Amp_13q12.13	0.994	1
SETD2	Del_22q13.32	0.994	1
CDK12	18q-Del	0.994	1
CDK12	Amp_13q12.2	0.994	1
NEXN	Amp_20q12	0.994	1
GMPS	Amp_20q11.21	0.994	1
BIRC3	Amp_13q22.1	0.994	1
ATM	Amp_13q12.13	0.994	1
ATM	Del_19p13.3	0.994	1
CREBBP	Amp_8p11.21	0.994	1
CREBBP	Del_15q15.2	0.994	1
CREBBP	Del_15q22.33	0.994	1
CTNNB1	Amp_13q22.1	0.994	1
KDM6A	Del_14q31.1	0.994	1
APC	Del_16q23.1	0.995	1
RNF43	Del_22q13.32	0.995	1
SOX9	18q-Del	0.995	1
SOX9	Del_17p12	0.995	1
B2M	Del_8p22	0.995	1
MLH1	Del_18p11.31	0.995	1
BCOR	Del_14q11.2	0.995	1
SMAD2	Amp_13q12.2	0.995	1
SMAD2	Amp_13q22.1	0.995	1
STARD3NL	Amp_20p11.21	0.995	1
NF2	Del_15q11.2	0.995	1
NF2	Del_21q11.2	0.995	1
MAPK6	20q-Amp	0.995	1
RHOA	18q-Del	0.995	1
FAM9A	Del_8p22	0.995	1
FAM9A	Del_18p11.31	0.995	1
EGR1	Del_8p23.2	0.995	1
PRKDC	Del_8p23.2	0.995	1
PRKDC	Del_15q15.2	0.995	1
PRKDC	Del_15q21.1	0.995	1
PRKDC	Del_22q13.32	0.995	1
FBXW7	18q-Del	0.995	1
FBXW7	Amp_1q31.1	0.995	1
FBXW7	Del_4q35.1	0.995	1
FBXW7	Del_17q24.3	0.995	1
FBXW7	Del_19p13.3	0.995	1
CHUK	Amp_20q11.21	0.995	1
MGA	22q-Del	0.995	1
MGA	Del_4p16.2	0.995	1
BCL9	Amp_8q24.21	0.995	1
BCL9	Del_8p23.2	0.995	1
BCL9	Del_18q21.2	0.995	1
ZBTB20	13q-Amp	0.995	1
P2RY13	Amp_20p11.21	0.995	1
P2RY13	Del_18q22.1	0.995	1
PTCH1	Amp_20q13.31	0.995	1
NLRC4	Amp_20q13.31	0.995	1
PLAGL2	20q-Amp	0.995	1
PLAGL2	Amp_20q11.21	0.995	1
DIP2B	Amp_20q13.31	0.995	1
RLIM	Del_18q22.1	0.995	1
ROS1	Del_18p11.31	0.995	1
MPHOSPH10	7p-Amp	0.995	1
MPHOSPH10	Amp_13q12.13	0.995	1
TOP2B	Amp_8q12.1	0.995	1
TOP2B	Amp_20q13.31	0.995	1
DCLK2	18p-Del	0.995	1
BMPR2	Del_4q35.1	0.995	1
BMPR2	Del_15q22.33	0.995	1
ALDH1A3	20q-Amp	0.995	1
ALDH1A3	Amp_20p11.21	0.995	1
BCORL1	Del_8p23.2	0.995	1
GPATCH8	Amp_20p11.21	0.995	1
MAP4K3	13q-Amp	0.995	1
MAP4K3	20p-Amp	0.995	1
MAP4K3	Del_18q22.1	0.995	1
SETD2	Amp_13q12.2	0.995	1
SETD2	Amp_13q22.1	0.995	1
CDK12	Amp_13q22.1	0.995	1
CDK12	Del_18q22.1	0.995	1
NEXN	18q-Del	0.995	1
NEXN	Del_18p11.31	0.995	1
GMPS	Amp_20q12	0.995	1
GMPS	Del_8p22	0.995	1
ATM	Amp_17q12	0.995	1
ATM	Del_18p11.31	0.995	1
CREBBP	Del_14q11.2	0.995	1
8p-Amp	Del_14q31.1	0.995	1
Amp_12p13.32	Del_15q15.2	0.995	1
Amp_12p13.32	Del_15q21.1	0.995	1
ARID1A	Del_10q23.31	0.996	1
CRIPAK	Del_14q31.1	0.996	1
SOX9	13q-Amp	0.996	1
SOX9	Del_14q11.2	0.996	1
B2M	Del_17p12	0.996	1
B2M	Del_18p11.31	0.996	1
MLH1	20p-Amp	0.996	1
SMAD2	Del_8p23.2	0.996	1
FMN2	Del_4p16.2	0.996	1
RHOA	Del_18q12.2	0.996	1
FAM9A	18p-Del	0.996	1
FAM9A	Del_17p12	0.996	1
EGR1	Del_18q22.1	0.996	1
PRKDC	Del_10q25.2	0.996	1
NF1	Del_21q11.2	0.996	1
FBXW7	1q-Amp	0.996	1
FBXW7	Del_1p36.11	0.996	1
FBXW7	Del_4p16.2	0.996	1
FBXW7	Del_5q21.2	0.996	1
CHUK	Amp_20q12	0.996	1
BCL9	17p-Del	0.996	1
P2RY13	Del_18q21.2	0.996	1
ST3GAL6	13q-Amp	0.996	1
ST3GAL6	20q-Amp	0.996	1
ST3GAL6	Amp_20q11.21	0.996	1
PLEKHF2	13q-Amp	0.996	1
PLEKHF2	Del_18q22.1	0.996	1
NR1H3	Del_18q21.2	0.996	1
ALPK2	Del_8p23.2	0.996	1
ASXL1	Amp_20q13.31	0.996	1
PTCH1	Del_3p26.3	0.996	1
NLRC4	8q-Amp	0.996	1
PLAGL2	Amp_20q12	0.996	1
C11orf30	8p-Del	0.996	1
DIP2B	18q-Del	0.996	1
DIP2B	Del_14q11.2	0.996	1
DIP2B	Del_14q31.1	0.996	1
MPHOSPH10	Amp_20q13.31	0.996	1
RBPJ	Del_18p11.31	0.996	1
SLC26A8	Amp_13q12.2	0.996	1
L1TD1	Amp_13q22.1	0.996	1
TOP2B	Del_17p12	0.996	1
FKBP9	Amp_13q12.2	0.996	1
HLA-A	13q-Amp	0.996	1
LARP4B	Del_1p36.11	0.996	1
LARP4B	Del_14q11.2	0.996	1
LARP4B	Del_14q31.1	0.996	1
BCORL1	13q-Amp	0.996	1
MAP4K3	Del_18q21.2	0.996	1
SETD2	7q-Amp	0.996	1
SETD2	21q-Del	0.996	1
NEXN	Amp_20q13.31	0.996	1
GMPS	Del_17p12	0.996	1
ATM	Del_4q22.1	0.996	1
CREBBP	14q-Del	0.996	1
CREBBP	Amp_8q24.21	0.996	1
CREBBP	Amp_20p11.21	0.996	1
CTNNB1	20p-Amp	0.996	1
20q-Amp	Del_16q23.1	0.996	1
9p-Amp	Del_1p36.11	0.996	1
Amp_8q12.1	Del_1p33	0.996	1
Amp_8q12.1	Del_1p13.2	0.996	1
Amp_8q12.1	Del_4p16.2	0.996	1
Amp_20q11.21	Del_16q23.1	0.996	1
ARID1A	9p-Amp	0.997	1
ARID1A	Del_22q13.32	0.997	1
RNF43	22q-Del	0.997	1
RNF43	Del_4p16.2	0.997	1
TP53	BCL9	0.997	1
SOX9	Amp_20q11.21	0.997	1
SOX9	Del_18q12.2	0.997	1
SOX9	Del_18q22.1	0.997	1
B2M	18p-Del	0.997	1
CDH1	9p-Amp	0.997	1
MLH1	Del_5q12.1	0.997	1
MLH1	Del_18q22.1	0.997	1
FMN2	7p-Amp	0.997	1
NF2	20q-Amp	0.997	1
NF2	Amp_20q12	0.997	1
NF2	Amp_20q13.31	0.997	1
RHOA	Del_8p23.2	0.997	1
EGR1	Del_8p22	0.997	1
EGR1	Del_18p11.31	0.997	1
EGR1	Del_18q21.2	0.997	1
PRKDC	15q-Del	0.997	1
PRKDC	Amp_20p11.21	0.997	1
NF1	21q-Del	0.997	1
FBXW7	Del_18q21.2	0.997	1
FBXW7	Del_18q22.1	0.997	1
MGA	Del_15q11.2	0.997	1
BCL9	20p-Amp	0.997	1
BCL9	Del_8p22	0.997	1
ST3GAL6	Amp_20q12	0.997	1
ST3GAL6	Del_18p11.31	0.997	1
PLEKHF2	Del_18p11.31	0.997	1
PLEKHF2	Del_18q21.2	0.997	1
ALPK2	17p-Del	0.997	1
ALPK2	Amp_13q22.1	0.997	1
ALPK2	Del_5q21.2	0.997	1
ASXL1	Del_17p12	0.997	1
ASXL1	Del_18q22.1	0.997	1
NLRC4	Amp_20q11.21	0.997	1
PLAGL2	Amp_20q13.31	0.997	1
DIP2B	Del_18q21.2	0.997	1
DIP2B	Del_18q22.1	0.997	1
PRRG1	18q-Del	0.997	1
RBPJ	18p-Del	0.997	1
RB1	Amp_11p15.5	0.997	1
L1TD1	Del_18q22.1	0.997	1
TOP2B	18p-Del	0.997	1
TOP2B	8p-Del	0.997	1
FKBP9	Amp_13q12.13	0.997	1
PTEN	21q-Del	0.997	1
PTEN	Del_17p12	0.997	1
HLA-A	Del_18q12.2	0.997	1
BMPR2	7p-Amp	0.997	1
ALDH1A3	Amp_20q12	0.997	1
LARP4B	20p-Amp	0.997	1
BCORL1	20p-Amp	0.997	1
BCORL1	Del_8p22	0.997	1
CDK12	Del_17p12	0.997	1
CDK12	Del_18q12.2	0.997	1
NEXN	Del_18q12.2	0.997	1
GMPS	Amp_20q13.31	0.997	1
BIRC3	18q-Del	0.997	1
CREBBP	7p-Amp	0.997	1
12p-Amp	Del_14q31.1	0.997	1
Amp_8p11.21	Del_3p26.3	0.997	1
ARID1A	20p-Amp	0.998	1
ARID1A	Del_10q21.1	0.998	1
ARID1A	Del_18q12.2	0.998	1
TP53	ACVR1B	0.998	1
TP53	NR1H3	0.998	1
TP53	ZNF486	0.998	1
TP53	12p-Amp	0.998	1
TP53	1q-Amp	0.998	1
FAM123B	Amp_17q12	0.998	1
SOX9	Amp_8q24.21	0.998	1
SOX9	Amp_13q12.2	0.998	1
SOX9	Del_4q35.1	0.998	1
B2M	Amp_13q12.2	0.998	1
B2M	Amp_13q22.1	0.998	1
ACVR1B	20q-Amp	0.998	1
ACVR1B	8p-Del	0.998	1
ACVR1B	Amp_20q11.21	0.998	1
ACVR1B	Del_8p22	0.998	1
CDH1	20q-Amp	0.998	1
CDH1	Del_17p12	0.998	1
BCOR	8q-Amp	0.998	1
BCOR	18p-Del	0.998	1
SMAD2	Del_8p22	0.998	1
SMAD2	Del_18p11.31	0.998	1
SMAD2	Del_18q21.2	0.998	1
WNT1	20q-Amp	0.998	1
WNT1	Amp_20q11.21	0.998	1
WNT1	Amp_20q12	0.998	1
STARD3NL	18q-Del	0.998	1
NF2	Amp_20q11.21	0.998	1
NF2	Del_18p11.31	0.998	1
MAPK6	13q-Amp	0.998	1
RHOA	Del_8p22	0.998	1
EGR1	18p-Del	0.998	1
EGR1	Del_17p12	0.998	1
NF1	Amp_20q12	0.998	1
FBXW7	4q-Del	0.998	1
FBXW7	Del_17p12	0.998	1
CHUK	13q-Amp	0.998	1
CHUK	17p-Del	0.998	1
MGA	13q-Amp	0.998	1
MGA	15q-Del	0.998	1
MGA	17p-Del	0.998	1
TPRKB	20q-Amp	0.998	1
ZBTB20	7p-Amp	0.998	1
ZBTB20	Amp_13q22.1	0.998	1
ST3GAL6	18p-Del	0.998	1
ST3GAL6	Amp_13q12.2	0.998	1
ST3GAL6	Amp_13q22.1	0.998	1
ST3GAL6	Amp_20q13.31	0.998	1
IQCD	20p-Amp	0.998	1
PLEKHF2	18p-Del	0.998	1
PLEKHF2	Amp_13q22.1	0.998	1
ASXL1	20p-Amp	0.998	1
ASXL1	Amp_13q12.13	0.998	1
PTCH1	20p-Amp	0.998	1
NLRC4	Del_18p11.31	0.998	1
C11orf30	Del_8p22	0.998	1
DIP2B	Del_18q12.2	0.998	1
ROS1	18p-Del	0.998	1
MPHOSPH10	Del_18q12.2	0.998	1
DDX26B	Amp_13q12.2	0.998	1
DDX26B	Amp_13q22.1	0.998	1
RBPJ	17p-Del	0.998	1
SLC26A8	20p-Amp	0.998	1
SLC26A8	Del_8p23.2	0.998	1
RBBP7	Del_17p12	0.998	1
RB1	18p-Del	0.998	1
RB1	Amp_20q13.31	0.998	1
L1TD1	13q-Amp	0.998	1
L1TD1	18q-Del	0.998	1
L1TD1	Del_8p23.2	0.998	1
L1TD1	Del_18q21.2	0.998	1
TOP2B	Amp_8q24.21	0.998	1
TOP2B	Del_8p23.2	0.998	1
DCLK2	18q-Del	0.998	1
FKBP9	13q-Amp	0.998	1
FKBP9	20p-Amp	0.998	1
HLA-A	Del_18q22.1	0.998	1
BMPR2	Del_1p36.11	0.998	1
BMPR2	Del_15q21.1	0.998	1
ALDH1A3	Amp_20q13.31	0.998	1
ALDH1A3	Del_8p23.2	0.998	1
MAP4K3	Amp_13q22.1	0.998	1
SLC12A6	8p-Del	0.998	1
SLC12A6	Del_17p12	0.998	1
SLC12A6	Del_18p11.31	0.998	1
CDK12	13q-Amp	0.998	1
CDK12	20p-Amp	0.998	1
CDK12	Amp_20q13.31	0.998	1
CDK12	Del_8p23.2	0.998	1
BIRC3	Del_18q12.2	0.998	1
ATM	22q-Del	0.998	1
ATM	Del_18q22.1	0.998	1
ZNF486	Amp_20q11.21	0.998	1
ZNF486	Del_18p11.31	0.998	1
KDM6A	Amp_13q12.13	0.998	1
12p-Amp	15q-Del	0.998	1
20p-Del	Amp_20p11.21	0.998	1
Amp_20q12	Del_16q23.1	0.998	1
ARID1A	Del_1p36.11	0.999	1
ARID1A	Del_18q21.2	0.999	1
ARID1A	Del_18q22.1	0.999	1
RNF43	7p-Amp	0.999	1
RNF43	Del_4q22.1	0.999	1
RNF43	Del_5q22.2	0.999	1
RNF43	Del_15q22.33	0.999	1
TP53	FAM9A	0.999	1
FAM123B	20q-Amp	0.999	1
FAM123B	Amp_20p11.21	0.999	1
SOX9	20q-Amp	0.999	1
SOX9	Amp_20q12	0.999	1
B2M	13q-Amp	0.999	1
B2M	20p-Amp	0.999	1
ACVR1B	18p-Del	0.999	1
ACVR1B	Amp_20q12	0.999	1
ACVR1B	Amp_20q13.31	0.999	1
ACVR1B	Del_17p12	0.999	1
ACVR1B	Del_18p11.31	0.999	1
MLH1	18p-Del	0.999	1
BCOR	20p-Amp	0.999	1
BCOR	Del_18p11.31	0.999	1
SMAD2	18p-Del	0.999	1
WNT1	Amp_20q13.31	0.999	1
FMN2	7q-Amp	0.999	1
FMN2	Amp_20q11.21	0.999	1
STARD3NL	Del_18p11.31	0.999	1
STARD3NL	Del_18q12.2	0.999	1
STARD3NL	Del_18q21.2	0.999	1
STARD3NL	Del_18q22.1	0.999	1
NF2	15q-Del	0.999	1
MAPK6	18p-Del	0.999	1
MAPK6	Amp_13q12.2	0.999	1
MAPK6	Amp_13q22.1	0.999	1
FAM9A	18q-Del	0.999	1
FAM9A	Del_18q21.2	0.999	1
FAM9A	Del_18q22.1	0.999	1
PRKDC	13q-Amp	0.999	1
PRKDC	20q-Amp	0.999	1
PRKDC	18p-Del	0.999	1
PRKDC	Del_5q12.1	0.999	1
PRKDC	Del_15q11.2	0.999	1
PRKDC	Del_15q22.33	0.999	1
PRKDC	Del_17p12	0.999	1
PRKDC	Del_18p11.31	0.999	1
FBXW7	20q-Amp	0.999	1
FBXW7	14q-Del	0.999	1
FBXW7	18p-Del	0.999	1
FBXW7	Amp_20q11.21	0.999	1
FBXW7	Del_14q11.2	0.999	1
FBXW7	Del_18p11.31	0.999	1
CHUK	Amp_13q12.2	0.999	1
CHUK	Amp_13q22.1	0.999	1
MGA	Amp_13q12.13	0.999	1
MGA	Amp_13q12.2	0.999	1
MGA	Del_15q22.33	0.999	1
TPRKB	Amp_20q13.31	0.999	1
ST3GAL6	18q-Del	0.999	1
ST3GAL6	Amp_13q12.13	0.999	1
ST3GAL6	Del_18q12.2	0.999	1
ALPK2	Amp_13q12.13	0.999	1
ALPK2	Amp_13q12.2	0.999	1
ALPK2	Amp_20p11.21	0.999	1
ASXL1	18q-Del	0.999	1
ASXL1	Del_18q12.2	0.999	1
PTCH1	20q-Amp	0.999	1
PTCH1	Amp_20p11.21	0.999	1
PTCH1	Amp_20q11.21	0.999	1
PTCH1	Amp_20q12	0.999	1
PTCH1	Del_17p12	0.999	1
PTCH1	Del_17q24.3	0.999	1
PTCH1	Del_18p11.31	0.999	1
NLRC4	20q-Amp	0.999	1
C11orf30	7p-Amp	0.999	1
C11orf30	18p-Del	0.999	1
C11orf30	18q-Del	0.999	1
C11orf30	Del_18q12.2	0.999	1
DIP2B	7p-Amp	0.999	1
PRRG1	20p-Amp	0.999	1
PRRG1	20q-Amp	0.999	1
PRRG1	Amp_20q11.21	0.999	1
PRRG1	Amp_20q12	0.999	1
PCBP1	Amp_8q24.21	0.999	1
PCBP1	Del_8p23.2	0.999	1
PCBP1	Del_8p22	0.999	1
PIK3R1	Del_1p36.11	0.999	1
RSPH3	Amp_20q11.21	0.999	1
RSPH3	Amp_20q12	0.999	1
RSPH3	Amp_20q13.31	0.999	1
ROS1	20q-Amp	0.999	1
ROS1	14q-Del	0.999	1
ROS1	18q-Del	0.999	1
ROS1	Amp_13q22.1	0.999	1
ROS1	Del_17p12	0.999	1
ROS1	Del_18q12.2	0.999	1
ROS1	Del_18q22.1	0.999	1
DDX26B	Amp_8q24.21	0.999	1
DDX26B	Del_8p23.2	0.999	1
RBPJ	20p-Amp	0.999	1
RBPJ	18q-Del	0.999	1
RBPJ	Del_18q12.2	0.999	1
SLC26A8	17p-Del	0.999	1
SLC26A8	18p-Del	0.999	1
SLC26A8	Amp_20p11.21	0.999	1
SLC26A8	Del_8p22	0.999	1
SLC26A8	Del_18p11.31	0.999	1
RBBP7	Amp_20q11.21	0.999	1
RB1	20q-Amp	0.999	1
RB1	18q-Del	0.999	1
RB1	Amp_20q11.21	0.999	1
RB1	Amp_20q12	0.999	1
RB1	Del_18q12.2	0.999	1
RB1	Del_18q22.1	0.999	1
L1TD1	Amp_13q12.2	0.999	1
L1TD1	Amp_20p11.21	0.999	1
L1TD1	Amp_20q11.21	0.999	1
L1TD1	Del_8p22	0.999	1
L1TD1	Del_18q12.2	0.999	1
TOP2B	18q-Del	0.999	1
TOP2B	Del_8p22	0.999	1
TOP2B	Del_18p11.31	0.999	1
TOP2B	Del_18q22.1	0.999	1
DCLK2	Del_18q12.2	0.999	1
DCLK2	Del_18q21.2	0.999	1
DCLK2	Del_18q22.1	0.999	1
FKBP9	18p-Del	0.999	1
FKBP9	Amp_13q22.1	0.999	1
FKBP9	Amp_20p11.21	0.999	1
FKBP9	Del_17p12	0.999	1
FKBP9	Del_18p11.31	0.999	1
PTEN	Amp_17q12	0.999	1
PTEN	Del_18q12.2	0.999	1
HLA-A	18q-Del	0.999	1
HLA-A	Amp_13q12.13	0.999	1
HLA-A	Amp_13q12.2	0.999	1
HLA-A	Amp_13q22.1	0.999	1
HLA-A	Del_18q21.2	0.999	1
BMPR2	Del_8p23.2	0.999	1
FYN	Del_8p23.2	0.999	1
FYN	Del_8p22	0.999	1
ALDH1A3	17p-Del	0.999	1
ALDH1A3	Amp_20q11.21	0.999	1
ALDH1A3	Del_8p22	0.999	1
ALDH1A3	Del_18q12.2	0.999	1
LARP4B	17p-Del	0.999	1
LARP4B	Amp_20p11.21	0.999	1
LARP4B	Del_8p22	0.999	1
BCORL1	18q-Del	0.999	1
BCORL1	Amp_13q22.1	0.999	1
BCORL1	Amp_20p11.21	0.999	1
BCORL1	Del_18q12.2	0.999	1
GPATCH8	13q-Amp	0.999	1
GPATCH8	20p-Amp	0.999	1
SETD2	15q-Del	0.999	1
SETD2	18p-Del	0.999	1
SETD2	Amp_13q12.13	0.999	1
SETD2	Del_4q22.1	0.999	1
SETD2	Del_15q22.33	0.999	1
SETD2	Del_17p12	0.999	1
SETD2	Del_18p11.31	0.999	1
SETD2	Del_21q11.2	0.999	1
SLC12A6	18p-Del	0.999	1
SLC12A6	18q-Del	0.999	1
SLC12A6	Amp_20p11.21	0.999	1
SLC12A6	Del_8p23.2	0.999	1
SLC12A6	Del_18q12.2	0.999	1
CDK12	Amp_20q11.21	0.999	1
CDK12	Amp_20q12	0.999	1
CDK12	Del_18q21.2	0.999	1
NEXN	Del_18q21.2	0.999	1
GMPS	Del_18q12.2	0.999	1
ATM	18p-Del	0.999	1
ATM	18q-Del	0.999	1
ATM	1p-Del	0.999	1
ATM	Amp_13q22.1	0.999	1
ATM	Del_8q11.1	0.999	1
ATM	Del_18q21.2	0.999	1
ZNF486	Amp_20q13.31	0.999	1
CREBBP	20p-Amp	0.999	1
CREBBP	8p-Del	0.999	1
CREBBP	Amp_11p15.5	0.999	1
CREBBP	Amp_17q12	0.999	1
KDM6A	Amp_13q22.1	0.999	1
KDM6A	Del_18q12.2	0.999	1
KDM6A	Del_18q21.2	0.999	1
12p-Amp	Del_22q13.32	0.999	1
20q-Amp	Del_6q26	0.999	1
7q-Amp	Del_10q21.1	0.999	1
Amp_12p13.32	Del_14q31.1	0.999	1
Amp_12p13.32	Del_15q11.2	0.999	1
Amp_12p13.32	Del_15q22.33	0.999	1
Amp_20q13.31	Del_16q23.1	0.999	1
ARID1A	GGT1	1	1
ARID1A	PCBP1	1	1
ARID1A	16p-Amp	1	1
ARID1A	16q-Amp	1	1
ARID1A	1q-Amp	1	1
ARID1A	20q-Amp	1	1
ARID1A	22q-Del	1	1
ARID1A	Amp_16p11.2	1	1
ARID1A	Amp_20q11.21	1	1
ARID1A	Amp_20q12	1	1
ARID1A	Amp_20q13.31	1	1
ARID1A	Del_2p12	1	1
ARID1A	Del_8q11.1	1	1
CRIPAK	B2M	1	1
CRIPAK	OR4D10	1	1
CRIPAK	THOC7	1	1
CRIPAK	MVK	1	1
CRIPAK	PLEKHF2	1	1
CRIPAK	NR1H3	1	1
CRIPAK	GRB2	1	1
CRIPAK	RSPH3	1	1
CRIPAK	RBPJ	1	1
CRIPAK	C14orf184	1	1
CRIPAK	FYN	1	1
CRIPAK	NEXN	1	1
CRIPAK	ZNF486	1	1
CRIPAK	GMNN	1	1
CRIPAK	16p-Amp	1	1
CRIPAK	16q-Amp	1	1
CRIPAK	17q-Amp	1	1
CRIPAK	2p-Amp	1	1
CRIPAK	2q-Amp	1	1
CRIPAK	6p-Amp	1	1
CRIPAK	1p-Del	1	1
CRIPAK	Amp_17q12	1	1
CRIPAK	Amp_17q24.1	1	1
CRIPAK	Del_2p12	1	1
CRIPAK	Del_2q22.1	1	1
CRIPAK	Del_7q31.1	1	1
CRIPAK	Del_8q11.1	1	1
RNF43	TP53	1	1
RNF43	GGT1	1	1
RNF43	13q-Amp	1	1
RNF43	16p-Amp	1	1
RNF43	16q-Amp	1	1
RNF43	17q-Amp	1	1
RNF43	20p-Amp	1	1
RNF43	20q-Amp	1	1
RNF43	2p-Amp	1	1
RNF43	2q-Amp	1	1
RNF43	6p-Amp	1	1
RNF43	7q-Amp	1	1
RNF43	14q-Del	1	1
RNF43	15q-Del	1	1
RNF43	17p-Del	1	1
RNF43	18p-Del	1	1
RNF43	18q-Del	1	1
RNF43	1p-Del	1	1
RNF43	20p-Del	1	1
RNF43	4p-Del	1	1
RNF43	4q-Del	1	1
RNF43	5q-Del	1	1
RNF43	8p-Del	1	1
RNF43	Amp_2q33.1	1	1
RNF43	Amp_6p21.1	1	1
RNF43	Amp_13q12.13	1	1
RNF43	Amp_13q12.2	1	1
RNF43	Amp_13q22.1	1	1
RNF43	Amp_17q12	1	1
RNF43	Amp_17q24.1	1	1
RNF43	Amp_19p13.2	1	1
RNF43	Amp_20p11.21	1	1
RNF43	Amp_20q11.21	1	1
RNF43	Amp_20q12	1	1
RNF43	Amp_20q13.31	1	1
RNF43	Del_1p36.11	1	1
RNF43	Del_1p33	1	1
RNF43	Del_2p12	1	1
RNF43	Del_2q22.1	1	1
RNF43	Del_3p26.3	1	1
RNF43	Del_4q35.1	1	1
RNF43	Del_5q12.1	1	1
RNF43	Del_5q21.2	1	1
RNF43	Del_6q26	1	1
RNF43	Del_7q31.1	1	1
RNF43	Del_8p23.2	1	1
RNF43	Del_8p22	1	1
RNF43	Del_14q11.2	1	1
RNF43	Del_14q31.1	1	1
RNF43	Del_15q11.2	1	1
RNF43	Del_15q15.2	1	1
RNF43	Del_15q21.1	1	1
RNF43	Del_16p13.3	1	1
RNF43	Del_17p12	1	1
RNF43	Del_17q24.3	1	1
RNF43	Del_18p11.31	1	1
RNF43	Del_18q12.2	1	1
RNF43	Del_18q21.2	1	1
RNF43	Del_18q22.1	1	1
RNF43	Del_19p13.3	1	1
TP53	ZBTB20	1	1
FAM123B	WNT1	1	1
FAM123B	ALG12	1	1
FAM123B	PRPS1	1	1
FAM123B	16q-Amp	1	1
FAM123B	17q-Amp	1	1
FAM123B	2p-Amp	1	1
FAM123B	2q-Amp	1	1
FAM123B	Amp_11p15.5	1	1
FAM123B	Amp_17q24.1	1	1
FAM123B	Amp_20q11.21	1	1
FAM123B	Amp_20q12	1	1
FAM123B	Amp_20q13.31	1	1
FAM123B	Del_2p12	1	1
SOX9	GRB2	1	1
SOX9	PRRG1	1	1
SOX9	IFT57	1	1
SOX9	VCX2	1	1
SOX9	C14orf184	1	1
SOX9	PTGDR	1	1
SOX9	GMNN	1	1
SOX9	6p-Amp	1	1
SOX9	9p-Amp	1	1
SOX9	1p-Del	1	1
SOX9	20p-Del	1	1
SOX9	22q-Del	1	1
SOX9	4p-Del	1	1
SOX9	5q-Del	1	1
SOX9	8p-Del	1	1
SOX9	Amp_6p21.1	1	1
SOX9	Amp_10q22.3	1	1
SOX9	Amp_19p13.2	1	1
SOX9	Amp_20q13.31	1	1
SOX9	Del_1p33	1	1
SOX9	Del_1p13.2	1	1
SOX9	Del_2p12	1	1
SOX9	Del_2q22.1	1	1
SOX9	Del_4p16.2	1	1
SOX9	Del_6q26	1	1
SOX9	Del_8p23.2	1	1
SOX9	Del_8p22	1	1
SOX9	Del_16p13.3	1	1
SOX9	Del_17q24.3	1	1
SOX9	Del_22q13.32	1	1
ZFP36L2	TXNDC2	1	1
ZFP36L2	SMAD2	1	1
ZFP36L2	GGT1	1	1
ZFP36L2	OR4D10	1	1
ZFP36L2	THOC7	1	1
ZFP36L2	PLEKHF2	1	1
ZFP36L2	C11orf30	1	1
ZFP36L2	PCBP1	1	1
ZFP36L2	RSPH3	1	1
ZFP36L2	RLIM	1	1
ZFP36L2	VCX2	1	1
ZFP36L2	RBPJ	1	1
ZFP36L2	HLA-A	1	1
ZFP36L2	PTGDR	1	1
ZFP36L2	BIRC3	1	1
ZFP36L2	HIST1H1T	1	1
ZFP36L2	GMNN	1	1
ZFP36L2	16p-Amp	1	1
ZFP36L2	16q-Amp	1	1
ZFP36L2	17q-Amp	1	1
ZFP36L2	2p-Amp	1	1
ZFP36L2	2q-Amp	1	1
ZFP36L2	6p-Amp	1	1
ZFP36L2	9p-Amp	1	1
ZFP36L2	1p-Del	1	1
ZFP36L2	5q-Del	1	1
ZFP36L2	Amp_6p21.1	1	1
ZFP36L2	Amp_16p11.2	1	1
ZFP36L2	Amp_17q12	1	1
ZFP36L2	Amp_17q24.1	1	1
ZFP36L2	Amp_19p13.2	1	1
ZFP36L2	Del_2p12	1	1
ZFP36L2	Del_3p26.3	1	1
ZFP36L2	Del_4p16.2	1	1
ZFP36L2	Del_7q31.1	1	1
ZFP36L2	Del_12p13.1	1	1
ZFP36L2	Del_16p13.3	1	1
B2M	WNT1	1	1
B2M	GGT1	1	1
B2M	SELPLG	1	1
B2M	THOC7	1	1
B2M	ATXN3L	1	1
B2M	IQCD	1	1
B2M	PLEKHF2	1	1
B2M	ALG12	1	1
B2M	GRB2	1	1
B2M	PLAGL2	1	1
B2M	IFT57	1	1
B2M	RLIM	1	1
B2M	VCX2	1	1
B2M	C14orf184	1	1
B2M	PRPS1	1	1
B2M	IDH1	1	1
B2M	16p-Amp	1	1
B2M	16q-Amp	1	1
B2M	17q-Amp	1	1
B2M	1q-Amp	1	1
B2M	20q-Amp	1	1
B2M	2p-Amp	1	1
B2M	2q-Amp	1	1
B2M	6p-Amp	1	1
B2M	7q-Amp	1	1
B2M	9p-Amp	1	1
B2M	15q-Del	1	1
B2M	18q-Del	1	1
B2M	1p-Del	1	1
B2M	20p-Del	1	1
B2M	22q-Del	1	1
B2M	4p-Del	1	1
B2M	4q-Del	1	1
B2M	5q-Del	1	1
B2M	Amp_1q31.1	1	1
B2M	Amp_5q22.3	1	1
B2M	Amp_6p21.1	1	1
B2M	Amp_10q22.3	1	1
B2M	Amp_11p15.5	1	1
B2M	Amp_13q12.13	1	1
B2M	Amp_16p11.2	1	1
B2M	Amp_17q12	1	1
B2M	Amp_19p13.2	1	1
B2M	Amp_20p11.21	1	1
B2M	Amp_20q11.21	1	1
B2M	Amp_20q12	1	1
B2M	Amp_20q13.31	1	1
B2M	Del_1p36.11	1	1
B2M	Del_1p13.2	1	1
B2M	Del_2p12	1	1
B2M	Del_2q22.1	1	1
B2M	Del_3q26.31	1	1
B2M	Del_4p16.2	1	1
B2M	Del_4q35.1	1	1
B2M	Del_5q12.1	1	1
B2M	Del_5q21.2	1	1
B2M	Del_5q22.2	1	1
B2M	Del_6p25.3	1	1
B2M	Del_6q26	1	1
B2M	Del_7q31.1	1	1
B2M	Del_8q11.1	1	1
B2M	Del_10q23.31	1	1
B2M	Del_12p13.1	1	1
B2M	Del_15q22.33	1	1
B2M	Del_16p13.3	1	1
B2M	Del_16q23.1	1	1
B2M	Del_17q24.3	1	1
B2M	Del_18q12.2	1	1
B2M	Del_18q21.2	1	1
B2M	Del_18q22.1	1	1
B2M	Del_19p13.3	1	1
B2M	Del_22q13.32	1	1
TXNDC2	WNT1	1	1
TXNDC2	RHOA	1	1
TXNDC2	PCBP1	1	1
TXNDC2	IFT57	1	1
TXNDC2	RSPH3	1	1
TXNDC2	VCX2	1	1
TXNDC2	FYN	1	1
TXNDC2	SLC12A6	1	1
TXNDC2	BIRC3	1	1
TXNDC2	ZNF486	1	1
TXNDC2	17q-Amp	1	1
TXNDC2	2p-Amp	1	1
TXNDC2	2q-Amp	1	1
TXNDC2	6p-Amp	1	1
TXNDC2	1p-Del	1	1
TXNDC2	5q-Del	1	1
TXNDC2	Amp_2q33.1	1	1
TXNDC2	Amp_6p21.1	1	1
TXNDC2	Amp_10q22.3	1	1
TXNDC2	Amp_17q24.1	1	1
TXNDC2	Del_2p12	1	1
TXNDC2	Del_2q22.1	1	1
TXNDC2	Del_3q26.31	1	1
TXNDC2	Del_5q12.1	1	1
TXNDC2	Del_5q21.2	1	1
TXNDC2	Del_6p25.3	1	1
TXNDC2	Del_6q26	1	1
TXNDC2	Del_8q11.1	1	1
TXNDC2	Del_10q21.1	1	1
TXNDC2	Del_10q23.31	1	1
TXNDC2	Del_17q24.3	1	1
TXNDC2	Del_19p13.3	1	1
ACVR1B	GGT1	1	1
ACVR1B	THOC7	1	1
ACVR1B	ZBTB20	1	1
ACVR1B	IQCD	1	1
ACVR1B	GRB2	1	1
ACVR1B	RLIM	1	1
ACVR1B	VCX2	1	1
ACVR1B	C14orf184	1	1
ACVR1B	ALDH1A3	1	1
ACVR1B	PRPS1	1	1
ACVR1B	PTGDR	1	1
ACVR1B	HIST1H1T	1	1
ACVR1B	ZNF486	1	1
ACVR1B	16p-Amp	1	1
ACVR1B	16q-Amp	1	1
ACVR1B	6p-Amp	1	1
ACVR1B	15q-Del	1	1
ACVR1B	17p-Del	1	1
ACVR1B	18q-Del	1	1
ACVR1B	1p-Del	1	1
ACVR1B	4p-Del	1	1
ACVR1B	4q-Del	1	1
ACVR1B	5q-Del	1	1
ACVR1B	Amp_6p21.1	1	1
ACVR1B	Amp_16p11.2	1	1
ACVR1B	Del_1p13.2	1	1
ACVR1B	Del_2p12	1	1
ACVR1B	Del_2q22.1	1	1
ACVR1B	Del_3p26.3	1	1
ACVR1B	Del_3q26.31	1	1
ACVR1B	Del_4p16.2	1	1
ACVR1B	Del_6q26	1	1
ACVR1B	Del_8q11.1	1	1
ACVR1B	Del_15q22.33	1	1
ACVR1B	Del_16p13.3	1	1
ACVR1B	Del_18q12.2	1	1
ACVR1B	Del_18q21.2	1	1
ACVR1B	Del_18q22.1	1	1
ACVR1B	Del_19p13.3	1	1
CDH1	THOC7	1	1
CDH1	GMNN	1	1
CDH1	18p-Del	1	1
CDH1	18q-Del	1	1
CDH1	Del_2p12	1	1
CDH1	Del_18p11.31	1	1
CDH1	Del_18q12.2	1	1
CDH1	Del_18q21.2	1	1
CDH1	Del_18q22.1	1	1
MLH1	GMNN	1	1
MLH1	9p-Amp	1	1
MLH1	18q-Del	1	1
MLH1	5q-Del	1	1
MLH1	Del_2p12	1	1
MLH1	Del_2q22.1	1	1
MLH1	Del_6p25.3	1	1
MLH1	Del_6q26	1	1
MLH1	Del_7q31.1	1	1
MLH1	Del_18q12.2	1	1
MLH1	Del_18q21.2	1	1
MLH1	Del_19p13.3	1	1
BCOR	GGT1	1	1
BCOR	PCBP1	1	1
BCOR	VCX2	1	1
BCOR	C14orf184	1	1
BCOR	13q-Amp	1	1
BCOR	1q-Amp	1	1
BCOR	20q-Amp	1	1
BCOR	2p-Amp	1	1
BCOR	2q-Amp	1	1
BCOR	6p-Amp	1	1
BCOR	18q-Del	1	1
BCOR	1p-Del	1	1
BCOR	5q-Del	1	1
BCOR	Amp_2q33.1	1	1
BCOR	Amp_6p21.1	1	1
BCOR	Amp_13q12.13	1	1
BCOR	Amp_13q12.2	1	1
BCOR	Amp_13q22.1	1	1
BCOR	Amp_17q12	1	1
BCOR	Amp_17q24.1	1	1
BCOR	Amp_20p11.21	1	1
BCOR	Amp_20q11.21	1	1
BCOR	Amp_20q12	1	1
BCOR	Amp_20q13.31	1	1
BCOR	Del_1p36.11	1	1
BCOR	Del_2p12	1	1
BCOR	Del_5q22.2	1	1
BCOR	Del_7q31.1	1	1
BCOR	Del_10q21.1	1	1
BCOR	Del_10q23.31	1	1
BCOR	Del_12p13.1	1	1
BCOR	Del_17q24.3	1	1
BCOR	Del_18q12.2	1	1
BCOR	Del_18q21.2	1	1
BCOR	Del_18q22.1	1	1
SMAD2	WNT1	1	1
SMAD2	GGT1	1	1
SMAD2	RHOA	1	1
SMAD2	THOC7	1	1
SMAD2	TPRKB	1	1
SMAD2	MVK	1	1
SMAD2	ALG12	1	1
SMAD2	PLAGL2	1	1
SMAD2	RSPH3	1	1
SMAD2	VCX2	1	1
SMAD2	PRPS1	1	1
SMAD2	GMNN	1	1
SMAD2	2p-Amp	1	1
SMAD2	15q-Del	1	1
SMAD2	1p-Del	1	1
SMAD2	20p-Del	1	1
SMAD2	5q-Del	1	1
SMAD2	Amp_6p21.1	1	1
SMAD2	Amp_10q22.3	1	1
SMAD2	Del_1p36.11	1	1
SMAD2	Del_2p12	1	1
SMAD2	Del_2q22.1	1	1
SMAD2	Del_3p26.3	1	1
SMAD2	Del_3q26.31	1	1
SMAD2	Del_5q21.2	1	1
SMAD2	Del_5q22.2	1	1
SMAD2	Del_6q26	1	1
SMAD2	Del_7q31.1	1	1
SMAD2	Del_8q11.1	1	1
SMAD2	Del_10q21.1	1	1
SMAD2	Del_10q23.31	1	1
SMAD2	Del_12p13.1	1	1
SMAD2	Del_16p13.3	1	1
WNT1	GGT1	1	1
WNT1	STARD3NL	1	1
WNT1	SELPLG	1	1
WNT1	OR4D10	1	1
WNT1	RPTN	1	1
WNT1	THOC7	1	1
WNT1	ATXN3L	1	1
WNT1	TPRKB	1	1
WNT1	ERBB2	1	1
WNT1	IQCD	1	1
WNT1	PLEKHF2	1	1
WNT1	ASXL1	1	1
WNT1	GRB2	1	1
WNT1	DIP2B	1	1
WNT1	PCBP1	1	1
WNT1	RSPH3	1	1
WNT1	C2orf29	1	1
WNT1	L1TD1	1	1
WNT1	DCLK2	1	1
WNT1	C14orf184	1	1
WNT1	FYN	1	1
WNT1	NEXN	1	1
WNT1	GMPS	1	1
WNT1	PTGDR	1	1
WNT1	BIRC3	1	1
WNT1	HIST1H1T	1	1
WNT1	ZNF486	1	1
WNT1	GMNN	1	1
WNT1	13q-Amp	1	1
WNT1	16p-Amp	1	1
WNT1	16q-Amp	1	1
WNT1	17q-Amp	1	1
WNT1	1q-Amp	1	1
WNT1	2p-Amp	1	1
WNT1	2q-Amp	1	1
WNT1	6p-Amp	1	1
WNT1	14q-Del	1	1
WNT1	15q-Del	1	1
WNT1	17p-Del	1	1
WNT1	18p-Del	1	1
WNT1	18q-Del	1	1
WNT1	1p-Del	1	1
WNT1	20p-Del	1	1
WNT1	22q-Del	1	1
WNT1	4p-Del	1	1
WNT1	4q-Del	1	1
WNT1	5q-Del	1	1
WNT1	8p-Del	1	1
WNT1	Amp_1q31.1	1	1
WNT1	Amp_2q33.1	1	1
WNT1	Amp_6p21.1	1	1
WNT1	Amp_10q22.3	1	1
WNT1	Amp_11p15.5	1	1
WNT1	Amp_13q12.13	1	1
WNT1	Amp_13q12.2	1	1
WNT1	Amp_13q22.1	1	1
WNT1	Amp_16p11.2	1	1
WNT1	Amp_17q12	1	1
WNT1	Amp_17q24.1	1	1
WNT1	Amp_19p13.2	1	1
WNT1	Del_1p36.11	1	1
WNT1	Del_1p33	1	1
WNT1	Del_1p13.2	1	1
WNT1	Del_2p12	1	1
WNT1	Del_2q22.1	1	1
WNT1	Del_3p26.3	1	1
WNT1	Del_3p14.2	1	1
WNT1	Del_3q26.31	1	1
WNT1	Del_4p16.2	1	1
WNT1	Del_4q22.1	1	1
WNT1	Del_4q35.1	1	1
WNT1	Del_5q12.1	1	1
WNT1	Del_5q21.2	1	1
WNT1	Del_5q22.2	1	1
WNT1	Del_6p25.3	1	1
WNT1	Del_6q26	1	1
WNT1	Del_7q31.1	1	1
WNT1	Del_8q11.1	1	1
WNT1	Del_10q21.1	1	1
WNT1	Del_10q23.31	1	1
WNT1	Del_10q25.2	1	1
WNT1	Del_14q11.2	1	1
WNT1	Del_14q31.1	1	1
WNT1	Del_15q22.33	1	1
WNT1	Del_16p13.3	1	1
WNT1	Del_17p12	1	1
WNT1	Del_17q24.3	1	1
WNT1	Del_18p11.31	1	1
WNT1	Del_18q12.2	1	1
WNT1	Del_18q21.2	1	1
WNT1	Del_18q22.1	1	1
WNT1	Del_19p13.3	1	1
WNT1	Del_22q13.32	1	1
FMN2	RHOA	1	1
FMN2	PTGDR	1	1
FMN2	20q-Amp	1	1
FMN2	6p-Amp	1	1
FMN2	1p-Del	1	1
FMN2	Amp_20q12	1	1
FMN2	Amp_20q13.31	1	1
FMN2	Del_2p12	1	1
FMN2	Del_2q22.1	1	1
FMN2	Del_7q31.1	1	1
FMN2	Del_10q25.2	1	1
GGT1	STARD3NL	1	1
GGT1	OR4D10	1	1
GGT1	MAPK6	1	1
GGT1	RHOA	1	1
GGT1	FAM9A	1	1
GGT1	EGR1	1	1
GGT1	RPTN	1	1
GGT1	CHUK	1	1
GGT1	MVK	1	1
GGT1	BCL9	1	1
GGT1	ERBB2	1	1
GGT1	P2RY13	1	1
GGT1	ST3GAL6	1	1
GGT1	IQCD	1	1
GGT1	PLEKHF2	1	1
GGT1	NR1H3	1	1
GGT1	ALG12	1	1
GGT1	NLRC4	1	1
GGT1	PLAGL2	1	1
GGT1	C11orf30	1	1
GGT1	DIP2B	1	1
GGT1	PRRG1	1	1
GGT1	PCBP1	1	1
GGT1	IFT57	1	1
GGT1	RSPH3	1	1
GGT1	RLIM	1	1
GGT1	MPHOSPH10	1	1
GGT1	C2orf29	1	1
GGT1	DDX26B	1	1
GGT1	RBBP7	1	1
GGT1	L1TD1	1	1
GGT1	TOP2B	1	1
GGT1	FKBP9	1	1
GGT1	C14orf184	1	1
GGT1	HLA-A	1	1
GGT1	BMPR2	1	1
GGT1	FYN	1	1
GGT1	ALDH1A3	1	1
GGT1	LARP4B	1	1
GGT1	GPATCH8	1	1
GGT1	MAP4K3	1	1
GGT1	SETD2	1	1
GGT1	SLC12A6	1	1
GGT1	NEXN	1	1
GGT1	GMPS	1	1
GGT1	PRPS1	1	1
GGT1	BIRC3	1	1
GGT1	HIST1H1T	1	1
GGT1	ZNF486	1	1
GGT1	CREBBP	1	1
GGT1	KDM6A	1	1
GGT1	1q-Amp	1	1
GGT1	6p-Amp	1	1
GGT1	9p-Amp	1	1
GGT1	Amp_1q31.1	1	1
GGT1	Amp_6p21.1	1	1
GGT1	Amp_10q22.3	1	1
GGT1	Amp_11p15.5	1	1
GGT1	Del_2p12	1	1
GGT1	Del_2q22.1	1	1
GGT1	Del_3q26.31	1	1
GGT1	Del_6p25.3	1	1
GGT1	Del_6q26	1	1
GGT1	Del_8q11.1	1	1
GGT1	Del_10q21.1	1	1
GGT1	Del_12p13.1	1	1
GGT1	Del_16q23.1	1	1
GGT1	Del_17q24.3	1	1
GGT1	Del_19p13.3	1	1
STARD3NL	OR4D10	1	1
STARD3NL	THOC7	1	1
STARD3NL	TPRKB	1	1
STARD3NL	ALG12	1	1
STARD3NL	PRRG1	1	1
STARD3NL	VCX2	1	1
STARD3NL	C14orf184	1	1
STARD3NL	ALDH1A3	1	1
STARD3NL	IDH1	1	1
STARD3NL	12p-Amp	1	1
STARD3NL	16p-Amp	1	1
STARD3NL	16q-Amp	1	1
STARD3NL	17q-Amp	1	1
STARD3NL	2p-Amp	1	1
STARD3NL	2q-Amp	1	1
STARD3NL	6p-Amp	1	1
STARD3NL	9p-Amp	1	1
STARD3NL	15q-Del	1	1
STARD3NL	18p-Del	1	1
STARD3NL	20p-Del	1	1
STARD3NL	21q-Del	1	1
STARD3NL	5q-Del	1	1
STARD3NL	Amp_2q33.1	1	1
STARD3NL	Amp_12p13.32	1	1
STARD3NL	Amp_17q12	1	1
STARD3NL	Amp_17q24.1	1	1
STARD3NL	Del_2p12	1	1
STARD3NL	Del_2q22.1	1	1
STARD3NL	Del_5q12.1	1	1
STARD3NL	Del_6q26	1	1
STARD3NL	Del_12p13.1	1	1
STARD3NL	Del_15q11.2	1	1
STARD3NL	Del_15q15.2	1	1
STARD3NL	Del_15q21.1	1	1
STARD3NL	Del_15q22.33	1	1
STARD3NL	Del_16p13.3	1	1
STARD3NL	Del_16q23.1	1	1
STARD3NL	Del_21q11.2	1	1
SELPLG	FAM9A	1	1
SELPLG	EGR1	1	1
SELPLG	MVK	1	1
SELPLG	P2RY13	1	1
SELPLG	ALG12	1	1
SELPLG	PLAGL2	1	1
SELPLG	RSPH3	1	1
SELPLG	VCX2	1	1
SELPLG	IDH1	1	1
SELPLG	16p-Amp	1	1
SELPLG	6p-Amp	1	1
SELPLG	1p-Del	1	1
SELPLG	Amp_6p21.1	1	1
SELPLG	Amp_16p11.2	1	1
SELPLG	Del_2p12	1	1
SELPLG	Del_2q22.1	1	1
SELPLG	Del_3p26.3	1	1
SELPLG	Del_6q26	1	1
SELPLG	Del_7q31.1	1	1
SELPLG	Del_8q11.1	1	1
SELPLG	Del_17q24.3	1	1
SELPLG	Del_19p13.3	1	1
OR4D10	RHOA	1	1
OR4D10	EGR1	1	1
OR4D10	ALG12	1	1
OR4D10	PLAGL2	1	1
OR4D10	C14orf184	1	1
OR4D10	BCORL1	1	1
OR4D10	HIST1H1T	1	1
OR4D10	IDH1	1	1
OR4D10	GMNN	1	1
OR4D10	17q-Amp	1	1
OR4D10	1q-Amp	1	1
OR4D10	2p-Amp	1	1
OR4D10	2q-Amp	1	1
OR4D10	6p-Amp	1	1
OR4D10	8p-Amp	1	1
OR4D10	9p-Amp	1	1
OR4D10	1p-Del	1	1
OR4D10	20p-Del	1	1
OR4D10	21q-Del	1	1
OR4D10	4q-Del	1	1
OR4D10	5q-Del	1	1
OR4D10	Amp_1q31.1	1	1
OR4D10	Amp_2q33.1	1	1
OR4D10	Amp_5q22.3	1	1
OR4D10	Amp_6p21.1	1	1
OR4D10	Amp_10q22.3	1	1
OR4D10	Amp_11p15.5	1	1
OR4D10	Amp_17q12	1	1
OR4D10	Amp_17q24.1	1	1
OR4D10	Del_1p33	1	1
OR4D10	Del_1p13.2	1	1
OR4D10	Del_2p12	1	1
OR4D10	Del_2q22.1	1	1
OR4D10	Del_3p26.3	1	1
OR4D10	Del_4q22.1	1	1
OR4D10	Del_4q35.1	1	1
OR4D10	Del_5q12.1	1	1
OR4D10	Del_5q21.2	1	1
OR4D10	Del_5q22.2	1	1
OR4D10	Del_6p25.3	1	1
OR4D10	Del_6q26	1	1
OR4D10	Del_7q31.1	1	1
OR4D10	Del_8q11.1	1	1
OR4D10	Del_10q21.1	1	1
OR4D10	Del_10q23.31	1	1
OR4D10	Del_10q25.2	1	1
OR4D10	Del_12p13.1	1	1
OR4D10	Del_17q24.3	1	1
OR4D10	Del_21q11.2	1	1
NF2	2p-Amp	1	1
NF2	2q-Amp	1	1
NF2	18p-Del	1	1
NF2	18q-Del	1	1
NF2	Amp_2q33.1	1	1
NF2	Del_2p12	1	1
NF2	Del_15q22.33	1	1
NF2	Del_18q12.2	1	1
NF2	Del_18q21.2	1	1
NF2	Del_18q22.1	1	1
MAPK6	THOC7	1	1
MAPK6	VCX2	1	1
MAPK6	C14orf184	1	1
MAPK6	GMNN	1	1
MAPK6	16p-Amp	1	1
MAPK6	16q-Amp	1	1
MAPK6	17q-Amp	1	1
MAPK6	1q-Amp	1	1
MAPK6	2p-Amp	1	1
MAPK6	2q-Amp	1	1
MAPK6	14q-Del	1	1
MAPK6	15q-Del	1	1
MAPK6	17p-Del	1	1
MAPK6	18q-Del	1	1
MAPK6	1p-Del	1	1
MAPK6	20p-Del	1	1
MAPK6	22q-Del	1	1
MAPK6	4p-Del	1	1
MAPK6	4q-Del	1	1
MAPK6	5q-Del	1	1
MAPK6	Amp_1q31.1	1	1
MAPK6	Amp_2q33.1	1	1
MAPK6	Amp_10q22.3	1	1
MAPK6	Amp_11p15.5	1	1
MAPK6	Amp_13q12.13	1	1
MAPK6	Amp_17q12	1	1
MAPK6	Amp_17q24.1	1	1
MAPK6	Amp_19p13.2	1	1
MAPK6	Del_1p33	1	1
MAPK6	Del_1p13.2	1	1
MAPK6	Del_2p12	1	1
MAPK6	Del_2q22.1	1	1
MAPK6	Del_3p26.3	1	1
MAPK6	Del_3q26.31	1	1
MAPK6	Del_4q35.1	1	1
MAPK6	Del_6p25.3	1	1
MAPK6	Del_6q26	1	1
MAPK6	Del_7q31.1	1	1
MAPK6	Del_8q11.1	1	1
MAPK6	Del_10q21.1	1	1
MAPK6	Del_10q23.31	1	1
MAPK6	Del_10q25.2	1	1
MAPK6	Del_12p13.1	1	1
MAPK6	Del_14q11.2	1	1
MAPK6	Del_14q31.1	1	1
MAPK6	Del_15q11.2	1	1
MAPK6	Del_15q15.2	1	1
MAPK6	Del_15q21.1	1	1
MAPK6	Del_15q22.33	1	1
MAPK6	Del_17p12	1	1
MAPK6	Del_18q12.2	1	1
MAPK6	Del_18q21.2	1	1
MAPK6	Del_18q22.1	1	1
MAPK6	Del_19p13.3	1	1
MAPK6	Del_22q13.32	1	1
RHOA	RPTN	1	1
RHOA	THOC7	1	1
RHOA	TPRKB	1	1
RHOA	MVK	1	1
RHOA	ERBB2	1	1
RHOA	IQCD	1	1
RHOA	PLEKHF2	1	1
RHOA	GRB2	1	1
RHOA	DIP2B	1	1
RHOA	IFT57	1	1
RHOA	RLIM	1	1
RHOA	VCX2	1	1
RHOA	C2orf29	1	1
RHOA	SLC26A8	1	1
RHOA	RBBP7	1	1
RHOA	L1TD1	1	1
RHOA	DCLK2	1	1
RHOA	C14orf184	1	1
RHOA	HLA-A	1	1
RHOA	NEXN	1	1
RHOA	GMPS	1	1
RHOA	PTGDR	1	1
RHOA	BIRC3	1	1
RHOA	HIST1H1T	1	1
RHOA	GMNN	1	1
RHOA	KDM6A	1	1
RHOA	16p-Amp	1	1
RHOA	16q-Amp	1	1
RHOA	17q-Amp	1	1
RHOA	2p-Amp	1	1
RHOA	2q-Amp	1	1
RHOA	6p-Amp	1	1
RHOA	9p-Amp	1	1
RHOA	1p-Del	1	1
RHOA	20p-Del	1	1
RHOA	21q-Del	1	1
RHOA	4p-Del	1	1
RHOA	4q-Del	1	1
RHOA	5q-Del	1	1
RHOA	Amp_2q33.1	1	1
RHOA	Amp_6p21.1	1	1
RHOA	Amp_16p11.2	1	1
RHOA	Amp_17q12	1	1
RHOA	Amp_17q24.1	1	1
RHOA	Amp_19p13.2	1	1
RHOA	Del_1p13.2	1	1
RHOA	Del_2p12	1	1
RHOA	Del_2q22.1	1	1
RHOA	Del_3p14.2	1	1
RHOA	Del_3q26.31	1	1
RHOA	Del_4p16.2	1	1
RHOA	Del_4q22.1	1	1
RHOA	Del_5q12.1	1	1
RHOA	Del_5q21.2	1	1
RHOA	Del_5q22.2	1	1
RHOA	Del_6q26	1	1
RHOA	Del_8q11.1	1	1
RHOA	Del_12p13.1	1	1
RHOA	Del_16p13.3	1	1
RHOA	Del_17q24.3	1	1
RHOA	Del_19p13.3	1	1
RHOA	Del_21q11.2	1	1
FAM9A	THOC7	1	1
FAM9A	ATXN3L	1	1
FAM9A	IQCD	1	1
FAM9A	PLEKHF2	1	1
FAM9A	PCBP1	1	1
FAM9A	VCX2	1	1
FAM9A	C2orf29	1	1
FAM9A	RBPJ	1	1
FAM9A	RBBP7	1	1
FAM9A	C14orf184	1	1
FAM9A	PTGDR	1	1
FAM9A	BIRC3	1	1
FAM9A	HIST1H1T	1	1
FAM9A	GMNN	1	1
FAM9A	16p-Amp	1	1
FAM9A	16q-Amp	1	1
FAM9A	17q-Amp	1	1
FAM9A	1q-Amp	1	1
FAM9A	2p-Amp	1	1
FAM9A	2q-Amp	1	1
FAM9A	6p-Amp	1	1
FAM9A	15q-Del	1	1
FAM9A	1p-Del	1	1
FAM9A	20p-Del	1	1
FAM9A	21q-Del	1	1
FAM9A	22q-Del	1	1
FAM9A	4p-Del	1	1
FAM9A	4q-Del	1	1
FAM9A	5q-Del	1	1
FAM9A	8p-Del	1	1
FAM9A	Amp_1q31.1	1	1
FAM9A	Amp_6p21.1	1	1
FAM9A	Amp_10q22.3	1	1
FAM9A	Amp_16p11.2	1	1
FAM9A	Amp_17q12	1	1
FAM9A	Amp_17q24.1	1	1
FAM9A	Amp_19p13.2	1	1
FAM9A	Del_1p36.11	1	1
FAM9A	Del_1p33	1	1
FAM9A	Del_1p13.2	1	1
FAM9A	Del_2p12	1	1
FAM9A	Del_2q22.1	1	1
FAM9A	Del_3p26.3	1	1
FAM9A	Del_3q26.31	1	1
FAM9A	Del_4p16.2	1	1
FAM9A	Del_4q22.1	1	1
FAM9A	Del_4q35.1	1	1
FAM9A	Del_5q12.1	1	1
FAM9A	Del_5q21.2	1	1
FAM9A	Del_6p25.3	1	1
FAM9A	Del_6q26	1	1
FAM9A	Del_8q11.1	1	1
FAM9A	Del_10q23.31	1	1
FAM9A	Del_10q25.2	1	1
FAM9A	Del_12p13.1	1	1
FAM9A	Del_15q22.33	1	1
FAM9A	Del_16p13.3	1	1
FAM9A	Del_17q24.3	1	1
FAM9A	Del_19p13.3	1	1
FAM9A	Del_21q11.2	1	1
FAM9A	Del_22q13.32	1	1
EGR1	THOC7	1	1
EGR1	ATXN3L	1	1
EGR1	TPRKB	1	1
EGR1	IQCD	1	1
EGR1	GRB2	1	1
EGR1	RSPH3	1	1
EGR1	RLIM	1	1
EGR1	VCX2	1	1
EGR1	C2orf29	1	1
EGR1	RBPJ	1	1
EGR1	RBBP7	1	1
EGR1	C14orf184	1	1
EGR1	NEXN	1	1
EGR1	PTGDR	1	1
EGR1	GMNN	1	1
EGR1	KDM6A	1	1
EGR1	16p-Amp	1	1
EGR1	16q-Amp	1	1
EGR1	17q-Amp	1	1
EGR1	1q-Amp	1	1
EGR1	20q-Amp	1	1
EGR1	2p-Amp	1	1
EGR1	2q-Amp	1	1
EGR1	6p-Amp	1	1
EGR1	9p-Amp	1	1
EGR1	14q-Del	1	1
EGR1	15q-Del	1	1
EGR1	1p-Del	1	1
EGR1	20p-Del	1	1
EGR1	22q-Del	1	1
EGR1	4p-Del	1	1
EGR1	4q-Del	1	1
EGR1	5q-Del	1	1
EGR1	Amp_1q31.1	1	1
EGR1	Amp_2q33.1	1	1
EGR1	Amp_6p21.1	1	1
EGR1	Amp_10q22.3	1	1
EGR1	Amp_11p15.5	1	1
EGR1	Amp_16p11.2	1	1
EGR1	Amp_17q24.1	1	1
EGR1	Amp_19p13.2	1	1
EGR1	Amp_20q11.21	1	1
EGR1	Amp_20q12	1	1
EGR1	Amp_20q13.31	1	1
EGR1	Del_1p33	1	1
EGR1	Del_1p13.2	1	1
EGR1	Del_2p12	1	1
EGR1	Del_2q22.1	1	1
EGR1	Del_3q26.31	1	1
EGR1	Del_4p16.2	1	1
EGR1	Del_4q22.1	1	1
EGR1	Del_4q35.1	1	1
EGR1	Del_5q22.2	1	1
EGR1	Del_6q26	1	1
EGR1	Del_7q31.1	1	1
EGR1	Del_8q11.1	1	1
EGR1	Del_10q25.2	1	1
EGR1	Del_12p13.1	1	1
EGR1	Del_14q11.2	1	1
EGR1	Del_14q31.1	1	1
EGR1	Del_15q22.33	1	1
EGR1	Del_16p13.3	1	1
EGR1	Del_17q24.3	1	1
EGR1	Del_19p13.3	1	1
EGR1	Del_22q13.32	1	1
PRKDC	THOC7	1	1
PRKDC	ALG12	1	1
PRKDC	1q-Amp	1	1
PRKDC	20p-Amp	1	1
PRKDC	18q-Del	1	1
PRKDC	5q-Del	1	1
PRKDC	Amp_13q12.13	1	1
PRKDC	Amp_13q12.2	1	1
PRKDC	Amp_13q22.1	1	1
PRKDC	Amp_20q11.21	1	1
PRKDC	Amp_20q12	1	1
PRKDC	Amp_20q13.31	1	1
PRKDC	Del_2p12	1	1
PRKDC	Del_18q12.2	1	1
PRKDC	Del_18q21.2	1	1
PRKDC	Del_18q22.1	1	1
RPTN	CHUK	1	1
RPTN	GRB2	1	1
RPTN	PCBP1	1	1
RPTN	RLIM	1	1
RPTN	C14orf184	1	1
RPTN	ALDH1A3	1	1
RPTN	PTGDR	1	1
RPTN	ZNF486	1	1
RPTN	GMNN	1	1
RPTN	16p-Amp	1	1
RPTN	16q-Amp	1	1
RPTN	17q-Amp	1	1
RPTN	1q-Amp	1	1
RPTN	2p-Amp	1	1
RPTN	2q-Amp	1	1
RPTN	6p-Amp	1	1
RPTN	1p-Del	1	1
RPTN	20p-Del	1	1
RPTN	21q-Del	1	1
RPTN	Amp_1q31.1	1	1
RPTN	Amp_2q33.1	1	1
RPTN	Amp_6p21.1	1	1
RPTN	Amp_10q22.3	1	1
RPTN	Amp_17q12	1	1
RPTN	Del_1p36.11	1	1
RPTN	Del_1p33	1	1
RPTN	Del_1p13.2	1	1
RPTN	Del_2p12	1	1
RPTN	Del_2q22.1	1	1
RPTN	Del_3q26.31	1	1
RPTN	Del_6q26	1	1
RPTN	Del_7q31.1	1	1
RPTN	Del_8q11.1	1	1
RPTN	Del_16p13.3	1	1
RPTN	Del_19p13.3	1	1
THOC7	BCL9	1	1
THOC7	P2RY13	1	1
THOC7	PLEKHF2	1	1
THOC7	NR1H3	1	1
THOC7	NLRC4	1	1
THOC7	PLAGL2	1	1
THOC7	C11orf30	1	1
THOC7	PRRG1	1	1
THOC7	PCBP1	1	1
THOC7	IFT57	1	1
THOC7	RSPH3	1	1
THOC7	RLIM	1	1
THOC7	MPHOSPH10	1	1
THOC7	VCX2	1	1
THOC7	C2orf29	1	1
THOC7	DDX26B	1	1
THOC7	RBPJ	1	1
THOC7	SLC26A8	1	1
THOC7	TOP2B	1	1
THOC7	DCLK2	1	1
THOC7	C14orf184	1	1
THOC7	HLA-A	1	1
THOC7	FYN	1	1
THOC7	GPATCH8	1	1
THOC7	SLC12A6	1	1
THOC7	NEXN	1	1
THOC7	PRPS1	1	1
THOC7	HIST1H1T	1	1
THOC7	ZNF486	1	1
THOC7	KDM6A	1	1
THOC7	12p-Amp	1	1
THOC7	17q-Amp	1	1
THOC7	2p-Amp	1	1
THOC7	2q-Amp	1	1
THOC7	6p-Amp	1	1
THOC7	9p-Amp	1	1
THOC7	1p-Del	1	1
THOC7	21q-Del	1	1
THOC7	4q-Del	1	1
THOC7	5q-Del	1	1
THOC7	Amp_2q33.1	1	1
THOC7	Amp_5q22.3	1	1
THOC7	Amp_6p21.1	1	1
THOC7	Amp_11p15.5	1	1
THOC7	Amp_12p13.32	1	1
THOC7	Amp_17q12	1	1
THOC7	Amp_17q24.1	1	1
THOC7	Amp_19p13.2	1	1
THOC7	Del_1p36.11	1	1
THOC7	Del_1p33	1	1
THOC7	Del_2p12	1	1
THOC7	Del_2q22.1	1	1
THOC7	Del_3p26.3	1	1
THOC7	Del_3p14.2	1	1
THOC7	Del_6p25.3	1	1
THOC7	Del_6q26	1	1
THOC7	Del_7q31.1	1	1
THOC7	Del_12p13.1	1	1
THOC7	Del_16p13.3	1	1
THOC7	Del_19p13.3	1	1
THOC7	Del_21q11.2	1	1
NF1	Del_2p12	1	1
FBXW7	13q-Amp	1	1
FBXW7	2q-Amp	1	1
FBXW7	22q-Del	1	1
FBXW7	Amp_13q12.13	1	1
FBXW7	Amp_13q12.2	1	1
FBXW7	Amp_13q22.1	1	1
FBXW7	Amp_20q12	1	1
FBXW7	Amp_20q13.31	1	1
FBXW7	Del_14q31.1	1	1
FBXW7	Del_22q13.32	1	1
CHUK	TPRKB	1	1
CHUK	MVK	1	1
CHUK	PLEKHF2	1	1
CHUK	NR1H3	1	1
CHUK	VCX2	1	1
CHUK	DDX26B	1	1
CHUK	HIST1H1T	1	1
CHUK	16p-Amp	1	1
CHUK	16q-Amp	1	1
CHUK	17q-Amp	1	1
CHUK	1q-Amp	1	1
CHUK	2p-Amp	1	1
CHUK	2q-Amp	1	1
CHUK	9p-Amp	1	1
CHUK	14q-Del	1	1
CHUK	1p-Del	1	1
CHUK	5q-Del	1	1
CHUK	Amp_1q31.1	1	1
CHUK	Amp_2q33.1	1	1
CHUK	Amp_10q22.3	1	1
CHUK	Amp_11p15.5	1	1
CHUK	Amp_13q12.13	1	1
CHUK	Amp_16p11.2	1	1
CHUK	Amp_17q24.1	1	1
CHUK	Del_1p33	1	1
CHUK	Del_2p12	1	1
CHUK	Del_2q22.1	1	1
CHUK	Del_5q12.1	1	1
CHUK	Del_6q26	1	1
CHUK	Del_7q31.1	1	1
CHUK	Del_8q11.1	1	1
CHUK	Del_12p13.1	1	1
CHUK	Del_14q31.1	1	1
CHUK	Del_17p12	1	1
ATXN3L	MVK	1	1
ATXN3L	RSPH3	1	1
ATXN3L	MPHOSPH10	1	1
ATXN3L	VCX2	1	1
ATXN3L	C14orf184	1	1
ATXN3L	GMNN	1	1
ATXN3L	16p-Amp	1	1
ATXN3L	16q-Amp	1	1
ATXN3L	17q-Amp	1	1
ATXN3L	2p-Amp	1	1
ATXN3L	2q-Amp	1	1
ATXN3L	6p-Amp	1	1
ATXN3L	4p-Del	1	1
ATXN3L	4q-Del	1	1
ATXN3L	Amp_2q33.1	1	1
ATXN3L	Amp_6p21.1	1	1
ATXN3L	Amp_16p11.2	1	1
ATXN3L	Amp_17q12	1	1
ATXN3L	Amp_19p13.2	1	1
ATXN3L	Del_2p12	1	1
ATXN3L	Del_3p26.3	1	1
ATXN3L	Del_3p14.2	1	1
ATXN3L	Del_4q22.1	1	1
ATXN3L	Del_7q31.1	1	1
MGA	VCX2	1	1
MGA	IDH1	1	1
MGA	20p-Amp	1	1
MGA	20q-Amp	1	1
MGA	2p-Amp	1	1
MGA	2q-Amp	1	1
MGA	6p-Amp	1	1
MGA	14q-Del	1	1
MGA	18p-Del	1	1
MGA	18q-Del	1	1
MGA	8p-Del	1	1
MGA	Amp_2q33.1	1	1
MGA	Amp_6p21.1	1	1
MGA	Amp_11p15.5	1	1
MGA	Amp_13q22.1	1	1
MGA	Amp_20p11.21	1	1
MGA	Amp_20q11.21	1	1
MGA	Amp_20q12	1	1
MGA	Amp_20q13.31	1	1
MGA	Del_2p12	1	1
MGA	Del_3p26.3	1	1
MGA	Del_6q26	1	1
MGA	Del_8p23.2	1	1
MGA	Del_8p22	1	1
MGA	Del_8q11.1	1	1
MGA	Del_10q21.1	1	1
MGA	Del_10q23.31	1	1
MGA	Del_14q11.2	1	1
MGA	Del_14q31.1	1	1
MGA	Del_15q15.2	1	1
MGA	Del_15q21.1	1	1
MGA	Del_17p12	1	1
MGA	Del_18p11.31	1	1
MGA	Del_18q12.2	1	1
MGA	Del_18q21.2	1	1
MGA	Del_18q22.1	1	1
MGA	Del_19p13.3	1	1
TPRKB	PLEKHF2	1	1
TPRKB	NR1H3	1	1
TPRKB	PLAGL2	1	1
TPRKB	PCBP1	1	1
TPRKB	IFT57	1	1
TPRKB	MPHOSPH10	1	1
TPRKB	VCX2	1	1
TPRKB	C14orf184	1	1
TPRKB	HLA-A	1	1
TPRKB	FYN	1	1
TPRKB	BIRC3	1	1
TPRKB	HIST1H1T	1	1
TPRKB	IDH1	1	1
TPRKB	16p-Amp	1	1
TPRKB	17q-Amp	1	1
TPRKB	2p-Amp	1	1
TPRKB	2q-Amp	1	1
TPRKB	14q-Del	1	1
TPRKB	1p-Del	1	1
TPRKB	20p-Del	1	1
TPRKB	21q-Del	1	1
TPRKB	22q-Del	1	1
TPRKB	4p-Del	1	1
TPRKB	4q-Del	1	1
TPRKB	5q-Del	1	1
TPRKB	Amp_2q33.1	1	1
TPRKB	Amp_5q22.3	1	1
TPRKB	Amp_10q22.3	1	1
TPRKB	Amp_11p15.5	1	1
TPRKB	Amp_16p11.2	1	1
TPRKB	Amp_17q12	1	1
TPRKB	Amp_17q24.1	1	1
TPRKB	Amp_19p13.2	1	1
TPRKB	Amp_20p11.21	1	1
TPRKB	Amp_20q11.21	1	1
TPRKB	Amp_20q12	1	1
TPRKB	Del_1p36.11	1	1
TPRKB	Del_1p33	1	1
TPRKB	Del_1p13.2	1	1
TPRKB	Del_2p12	1	1
TPRKB	Del_2q22.1	1	1
TPRKB	Del_3p26.3	1	1
TPRKB	Del_3p14.2	1	1
TPRKB	Del_4p16.2	1	1
TPRKB	Del_4q22.1	1	1
TPRKB	Del_5q12.1	1	1
TPRKB	Del_5q21.2	1	1
TPRKB	Del_5q22.2	1	1
TPRKB	Del_6q26	1	1
TPRKB	Del_7q31.1	1	1
TPRKB	Del_8q11.1	1	1
TPRKB	Del_10q21.1	1	1
TPRKB	Del_10q23.31	1	1
TPRKB	Del_10q25.2	1	1
TPRKB	Del_12p13.1	1	1
TPRKB	Del_14q11.2	1	1
TPRKB	Del_14q31.1	1	1
TPRKB	Del_15q15.2	1	1
TPRKB	Del_15q21.1	1	1
TPRKB	Del_16q23.1	1	1
TPRKB	Del_17q24.3	1	1
TPRKB	Del_19p13.3	1	1
TPRKB	Del_21q11.2	1	1
TPRKB	Del_22q13.32	1	1
MVK	IQCD	1	1
MVK	GRB2	1	1
MVK	PCBP1	1	1
MVK	RSPH3	1	1
MVK	RLIM	1	1
MVK	VCX2	1	1
MVK	DCLK2	1	1
MVK	PTGDR	1	1
MVK	HIST1H1T	1	1
MVK	GMNN	1	1
MVK	13q-Amp	1	1
MVK	16p-Amp	1	1
MVK	16q-Amp	1	1
MVK	17q-Amp	1	1
MVK	20p-Amp	1	1
MVK	20q-Amp	1	1
MVK	2p-Amp	1	1
MVK	2q-Amp	1	1
MVK	6p-Amp	1	1
MVK	7p-Amp	1	1
MVK	7q-Amp	1	1
MVK	14q-Del	1	1
MVK	15q-Del	1	1
MVK	17p-Del	1	1
MVK	18p-Del	1	1
MVK	18q-Del	1	1
MVK	1p-Del	1	1
MVK	20p-Del	1	1
MVK	22q-Del	1	1
MVK	4p-Del	1	1
MVK	4q-Del	1	1
MVK	5q-Del	1	1
MVK	8p-Del	1	1
MVK	Amp_2q33.1	1	1
MVK	Amp_5q22.3	1	1
MVK	Amp_6p21.1	1	1
MVK	Amp_10q22.3	1	1
MVK	Amp_11p15.5	1	1
MVK	Amp_13q12.13	1	1
MVK	Amp_13q12.2	1	1
MVK	Amp_13q22.1	1	1
MVK	Amp_16p11.2	1	1
MVK	Amp_17q12	1	1
MVK	Amp_17q24.1	1	1
MVK	Amp_19p13.2	1	1
MVK	Amp_20p11.21	1	1
MVK	Amp_20q11.21	1	1
MVK	Amp_20q12	1	1
MVK	Amp_20q13.31	1	1
MVK	Del_1p36.11	1	1
MVK	Del_1p33	1	1
MVK	Del_1p13.2	1	1
MVK	Del_2p12	1	1
MVK	Del_2q22.1	1	1
MVK	Del_3p26.3	1	1
MVK	Del_3p14.2	1	1
MVK	Del_3q26.31	1	1
MVK	Del_4p16.2	1	1
MVK	Del_4q22.1	1	1
MVK	Del_4q35.1	1	1
MVK	Del_5q12.1	1	1
MVK	Del_5q21.2	1	1
MVK	Del_5q22.2	1	1
MVK	Del_6p25.3	1	1
MVK	Del_6q26	1	1
MVK	Del_7q31.1	1	1
MVK	Del_8p23.2	1	1
MVK	Del_8p22	1	1
MVK	Del_10q21.1	1	1
MVK	Del_10q23.31	1	1
MVK	Del_10q25.2	1	1
MVK	Del_12p13.1	1	1
MVK	Del_14q11.2	1	1
MVK	Del_14q31.1	1	1
MVK	Del_15q22.33	1	1
MVK	Del_16p13.3	1	1
MVK	Del_17p12	1	1
MVK	Del_17q24.3	1	1
MVK	Del_18p11.31	1	1
MVK	Del_18q12.2	1	1
MVK	Del_18q21.2	1	1
MVK	Del_18q22.1	1	1
MVK	Del_19p13.3	1	1
MVK	Del_22q13.32	1	1
BCL9	NR1H3	1	1
BCL9	ALG12	1	1
BCL9	C14orf184	1	1
BCL9	16p-Amp	1	1
BCL9	16q-Amp	1	1
BCL9	17q-Amp	1	1
BCL9	20q-Amp	1	1
BCL9	2p-Amp	1	1
BCL9	2q-Amp	1	1
BCL9	6p-Amp	1	1
BCL9	7p-Amp	1	1
BCL9	7q-Amp	1	1
BCL9	1p-Del	1	1
BCL9	4p-Del	1	1
BCL9	4q-Del	1	1
BCL9	Amp_2q33.1	1	1
BCL9	Amp_5q22.3	1	1
BCL9	Amp_6p21.1	1	1
BCL9	Amp_16p11.2	1	1
BCL9	Amp_17q12	1	1
BCL9	Amp_17q24.1	1	1
BCL9	Amp_19p13.2	1	1
BCL9	Amp_20p11.21	1	1
BCL9	Amp_20q11.21	1	1
BCL9	Amp_20q12	1	1
BCL9	Amp_20q13.31	1	1
BCL9	Del_1p33	1	1
BCL9	Del_1p13.2	1	1
BCL9	Del_2p12	1	1
BCL9	Del_2q22.1	1	1
BCL9	Del_3p26.3	1	1
BCL9	Del_4p16.2	1	1
BCL9	Del_6q26	1	1
BCL9	Del_8q11.1	1	1
BCL9	Del_10q25.2	1	1
BCL9	Del_16p13.3	1	1
BCL9	Del_17q24.3	1	1
ZBTB20	PLEKHF2	1	1
ZBTB20	ALG12	1	1
ZBTB20	VCX2	1	1
ZBTB20	C14orf184	1	1
ZBTB20	PRPS1	1	1
ZBTB20	16p-Amp	1	1
ZBTB20	17q-Amp	1	1
ZBTB20	1q-Amp	1	1
ZBTB20	20p-Amp	1	1
ZBTB20	20q-Amp	1	1
ZBTB20	2p-Amp	1	1
ZBTB20	2q-Amp	1	1
ZBTB20	6p-Amp	1	1
ZBTB20	14q-Del	1	1
ZBTB20	17p-Del	1	1
ZBTB20	18p-Del	1	1
ZBTB20	18q-Del	1	1
ZBTB20	1p-Del	1	1
ZBTB20	20p-Del	1	1
ZBTB20	22q-Del	1	1
ZBTB20	4p-Del	1	1
ZBTB20	4q-Del	1	1
ZBTB20	5q-Del	1	1
ZBTB20	8p-Del	1	1
ZBTB20	Amp_1q31.1	1	1
ZBTB20	Amp_2q33.1	1	1
ZBTB20	Amp_5q22.3	1	1
ZBTB20	Amp_6p21.1	1	1
ZBTB20	Amp_10q22.3	1	1
ZBTB20	Amp_11p15.5	1	1
ZBTB20	Amp_16p11.2	1	1
ZBTB20	Amp_17q12	1	1
ZBTB20	Amp_17q24.1	1	1
ZBTB20	Amp_19p13.2	1	1
ZBTB20	Amp_20p11.21	1	1
ZBTB20	Amp_20q11.21	1	1
ZBTB20	Amp_20q12	1	1
ZBTB20	Amp_20q13.31	1	1
ZBTB20	Del_1p36.11	1	1
ZBTB20	Del_1p13.2	1	1
ZBTB20	Del_2p12	1	1
ZBTB20	Del_2q22.1	1	1
ZBTB20	Del_3p26.3	1	1
ZBTB20	Del_3q26.31	1	1
ZBTB20	Del_4p16.2	1	1
ZBTB20	Del_4q22.1	1	1
ZBTB20	Del_4q35.1	1	1
ZBTB20	Del_6q26	1	1
ZBTB20	Del_7q31.1	1	1
ZBTB20	Del_8p23.2	1	1
ZBTB20	Del_8p22	1	1
ZBTB20	Del_8q11.1	1	1
ZBTB20	Del_10q21.1	1	1
ZBTB20	Del_10q23.31	1	1
ZBTB20	Del_10q25.2	1	1
ZBTB20	Del_12p13.1	1	1
ZBTB20	Del_14q11.2	1	1
ZBTB20	Del_14q31.1	1	1
ZBTB20	Del_16p13.3	1	1
ZBTB20	Del_17p12	1	1
ZBTB20	Del_17q24.3	1	1
ZBTB20	Del_18p11.31	1	1
ZBTB20	Del_18q12.2	1	1
ZBTB20	Del_18q21.2	1	1
ZBTB20	Del_18q22.1	1	1
ZBTB20	Del_19p13.3	1	1
ZBTB20	Del_22q13.32	1	1
ERBB2	ALG12	1	1
ERBB2	PLAGL2	1	1
ERBB2	VCX2	1	1
ERBB2	HIST1H1T	1	1
ERBB2	GMNN	1	1
ERBB2	17q-Amp	1	1
ERBB2	2p-Amp	1	1
ERBB2	2q-Amp	1	1
ERBB2	6p-Amp	1	1
ERBB2	9p-Amp	1	1
ERBB2	1p-Del	1	1
ERBB2	Amp_10q22.3	1	1
ERBB2	Del_1p13.2	1	1
ERBB2	Del_2p12	1	1
ERBB2	Del_2q22.1	1	1
ERBB2	Del_7q31.1	1	1
ERBB2	Del_10q21.1	1	1
ERBB2	Del_16p13.3	1	1
P2RY13	IQCD	1	1
P2RY13	NR1H3	1	1
P2RY13	ASXL1	1	1
P2RY13	GRB2	1	1
P2RY13	PCBP1	1	1
P2RY13	IFT57	1	1
P2RY13	RLIM	1	1
P2RY13	VCX2	1	1
P2RY13	C2orf29	1	1
P2RY13	C14orf184	1	1
P2RY13	PTGDR	1	1
P2RY13	GMNN	1	1
P2RY13	16p-Amp	1	1
P2RY13	16q-Amp	1	1
P2RY13	1q-Amp	1	1
P2RY13	20q-Amp	1	1
P2RY13	2p-Amp	1	1
P2RY13	2q-Amp	1	1
P2RY13	6p-Amp	1	1
P2RY13	9p-Amp	1	1
P2RY13	14q-Del	1	1
P2RY13	15q-Del	1	1
P2RY13	1p-Del	1	1
P2RY13	20p-Del	1	1
P2RY13	21q-Del	1	1
P2RY13	5q-Del	1	1
P2RY13	Amp_1q31.1	1	1
P2RY13	Amp_2q33.1	1	1
P2RY13	Amp_5q22.3	1	1
P2RY13	Amp_6p21.1	1	1
P2RY13	Amp_10q22.3	1	1
P2RY13	Amp_16p11.2	1	1
P2RY13	Amp_20q11.21	1	1
P2RY13	Amp_20q12	1	1
P2RY13	Amp_20q13.31	1	1
P2RY13	Del_1p33	1	1
P2RY13	Del_1p13.2	1	1
P2RY13	Del_2p12	1	1
P2RY13	Del_5q12.1	1	1
P2RY13	Del_6q26	1	1
P2RY13	Del_8q11.1	1	1
P2RY13	Del_12p13.1	1	1
P2RY13	Del_14q11.2	1	1
P2RY13	Del_15q22.33	1	1
P2RY13	Del_16p13.3	1	1
P2RY13	Del_16q23.1	1	1
P2RY13	Del_21q11.2	1	1
ST3GAL6	PLEKHF2	1	1
ST3GAL6	VCX2	1	1
ST3GAL6	C2orf29	1	1
ST3GAL6	C14orf184	1	1
ST3GAL6	GMNN	1	1
ST3GAL6	16p-Amp	1	1
ST3GAL6	16q-Amp	1	1
ST3GAL6	17q-Amp	1	1
ST3GAL6	1q-Amp	1	1
ST3GAL6	2p-Amp	1	1
ST3GAL6	2q-Amp	1	1
ST3GAL6	6p-Amp	1	1
ST3GAL6	9p-Amp	1	1
ST3GAL6	14q-Del	1	1
ST3GAL6	15q-Del	1	1
ST3GAL6	17p-Del	1	1
ST3GAL6	1p-Del	1	1
ST3GAL6	20p-Del	1	1
ST3GAL6	21q-Del	1	1
ST3GAL6	22q-Del	1	1
ST3GAL6	4p-Del	1	1
ST3GAL6	4q-Del	1	1
ST3GAL6	5q-Del	1	1
ST3GAL6	8p-Del	1	1
ST3GAL6	Amp_2q33.1	1	1
ST3GAL6	Amp_6p21.1	1	1
ST3GAL6	Amp_10q22.3	1	1
ST3GAL6	Amp_11p15.5	1	1
ST3GAL6	Amp_16p11.2	1	1
ST3GAL6	Amp_17q12	1	1
ST3GAL6	Amp_17q24.1	1	1
ST3GAL6	Amp_19p13.2	1	1
ST3GAL6	Del_1p36.11	1	1
ST3GAL6	Del_1p33	1	1
ST3GAL6	Del_1p13.2	1	1
ST3GAL6	Del_2p12	1	1
ST3GAL6	Del_2q22.1	1	1
ST3GAL6	Del_3p26.3	1	1
ST3GAL6	Del_3q26.31	1	1
ST3GAL6	Del_4p16.2	1	1
ST3GAL6	Del_5q12.1	1	1
ST3GAL6	Del_6q26	1	1
ST3GAL6	Del_7q31.1	1	1
ST3GAL6	Del_8p23.2	1	1
ST3GAL6	Del_8p22	1	1
ST3GAL6	Del_8q11.1	1	1
ST3GAL6	Del_10q21.1	1	1
ST3GAL6	Del_10q23.31	1	1
ST3GAL6	Del_10q25.2	1	1
ST3GAL6	Del_12p13.1	1	1
ST3GAL6	Del_14q11.2	1	1
ST3GAL6	Del_14q31.1	1	1
ST3GAL6	Del_15q11.2	1	1
ST3GAL6	Del_15q21.1	1	1
ST3GAL6	Del_15q22.33	1	1
ST3GAL6	Del_16p13.3	1	1
ST3GAL6	Del_17p12	1	1
ST3GAL6	Del_17q24.3	1	1
ST3GAL6	Del_18q21.2	1	1
ST3GAL6	Del_18q22.1	1	1
ST3GAL6	Del_19p13.3	1	1
ST3GAL6	Del_21q11.2	1	1
ST3GAL6	Del_22q13.32	1	1
IQCD	PLEKHF2	1	1
IQCD	PLAGL2	1	1
IQCD	IFT57	1	1
IQCD	MPHOSPH10	1	1
IQCD	VCX2	1	1
IQCD	DDX26B	1	1
IQCD	C14orf184	1	1
IQCD	GPATCH8	1	1
IQCD	MAP4K3	1	1
IQCD	GMPS	1	1
IQCD	PRPS1	1	1
IQCD	IDH1	1	1
IQCD	GMNN	1	1
IQCD	KDM6A	1	1
IQCD	16p-Amp	1	1
IQCD	16q-Amp	1	1
IQCD	2p-Amp	1	1
IQCD	2q-Amp	1	1
IQCD	6p-Amp	1	1
IQCD	9p-Amp	1	1
IQCD	14q-Del	1	1
IQCD	1p-Del	1	1
IQCD	22q-Del	1	1
IQCD	Amp_2q33.1	1	1
IQCD	Amp_5q22.3	1	1
IQCD	Amp_6p21.1	1	1
IQCD	Amp_11p15.5	1	1
IQCD	Amp_16p11.2	1	1
IQCD	Amp_20p11.21	1	1
IQCD	Del_1p33	1	1
IQCD	Del_1p13.2	1	1
IQCD	Del_2p12	1	1
IQCD	Del_2q22.1	1	1
IQCD	Del_3p26.3	1	1
IQCD	Del_4p16.2	1	1
IQCD	Del_4q22.1	1	1
IQCD	Del_6p25.3	1	1
IQCD	Del_6q26	1	1
IQCD	Del_7q31.1	1	1
IQCD	Del_8q11.1	1	1
IQCD	Del_10q21.1	1	1
IQCD	Del_10q23.31	1	1
IQCD	Del_10q25.2	1	1
IQCD	Del_12p13.1	1	1
IQCD	Del_14q11.2	1	1
IQCD	Del_14q31.1	1	1
IQCD	Del_16p13.3	1	1
IQCD	Del_17q24.3	1	1
IQCD	Del_19p13.3	1	1
PLEKHF2	GRB2	1	1
PLEKHF2	PCBP1	1	1
PLEKHF2	MPHOSPH10	1	1
PLEKHF2	RBBP7	1	1
PLEKHF2	C14orf184	1	1
PLEKHF2	MAP4K3	1	1
PLEKHF2	PTGDR	1	1
PLEKHF2	IDH1	1	1
PLEKHF2	ZNF486	1	1
PLEKHF2	GMNN	1	1
PLEKHF2	12p-Amp	1	1
PLEKHF2	16p-Amp	1	1
PLEKHF2	16q-Amp	1	1
PLEKHF2	17q-Amp	1	1
PLEKHF2	1q-Amp	1	1
PLEKHF2	2p-Amp	1	1
PLEKHF2	2q-Amp	1	1
PLEKHF2	6p-Amp	1	1
PLEKHF2	8p-Amp	1	1
PLEKHF2	1p-Del	1	1
PLEKHF2	20p-Del	1	1
PLEKHF2	5q-Del	1	1
PLEKHF2	Amp_1q31.1	1	1
PLEKHF2	Amp_2q33.1	1	1
PLEKHF2	Amp_6p21.1	1	1
PLEKHF2	Amp_10q22.3	1	1
PLEKHF2	Amp_17q12	1	1
PLEKHF2	Amp_17q24.1	1	1
PLEKHF2	Amp_19p13.2	1	1
PLEKHF2	Del_2p12	1	1
PLEKHF2	Del_3p26.3	1	1
PLEKHF2	Del_3q26.31	1	1
PLEKHF2	Del_4p16.2	1	1
PLEKHF2	Del_5q12.1	1	1
PLEKHF2	Del_5q21.2	1	1
PLEKHF2	Del_6p25.3	1	1
PLEKHF2	Del_6q26	1	1
PLEKHF2	Del_7q31.1	1	1
PLEKHF2	Del_8q11.1	1	1
PLEKHF2	Del_10q25.2	1	1
PLEKHF2	Del_12p13.1	1	1
PLEKHF2	Del_16p13.3	1	1
PLEKHF2	Del_17q24.3	1	1
NR1H3	GRB2	1	1
NR1H3	PLAGL2	1	1
NR1H3	C11orf30	1	1
NR1H3	PCBP1	1	1
NR1H3	IFT57	1	1
NR1H3	RLIM	1	1
NR1H3	MPHOSPH10	1	1
NR1H3	VCX2	1	1
NR1H3	DCLK2	1	1
NR1H3	C14orf184	1	1
NR1H3	FYN	1	1
NR1H3	GPATCH8	1	1
NR1H3	GMPS	1	1
NR1H3	PRPS1	1	1
NR1H3	PTGDR	1	1
NR1H3	BIRC3	1	1
NR1H3	HIST1H1T	1	1
NR1H3	IDH1	1	1
NR1H3	GMNN	1	1
NR1H3	KDM6A	1	1
NR1H3	16p-Amp	1	1
NR1H3	16q-Amp	1	1
NR1H3	17q-Amp	1	1
NR1H3	2p-Amp	1	1
NR1H3	2q-Amp	1	1
NR1H3	6p-Amp	1	1
NR1H3	14q-Del	1	1
NR1H3	15q-Del	1	1
NR1H3	1p-Del	1	1
NR1H3	20p-Del	1	1
NR1H3	4p-Del	1	1
NR1H3	4q-Del	1	1
NR1H3	5q-Del	1	1
NR1H3	Amp_2q33.1	1	1
NR1H3	Amp_10q22.3	1	1
NR1H3	Amp_16p11.2	1	1
NR1H3	Amp_17q12	1	1
NR1H3	Amp_17q24.1	1	1
NR1H3	Amp_19p13.2	1	1
NR1H3	Del_1p13.2	1	1
NR1H3	Del_2p12	1	1
NR1H3	Del_2q22.1	1	1
NR1H3	Del_3p26.3	1	1
NR1H3	Del_3q26.31	1	1
NR1H3	Del_4q22.1	1	1
NR1H3	Del_5q12.1	1	1
NR1H3	Del_5q21.2	1	1
NR1H3	Del_5q22.2	1	1
NR1H3	Del_6q26	1	1
NR1H3	Del_7q31.1	1	1
NR1H3	Del_8q11.1	1	1
NR1H3	Del_14q11.2	1	1
NR1H3	Del_14q31.1	1	1
NR1H3	Del_15q11.2	1	1
NR1H3	Del_15q15.2	1	1
NR1H3	Del_15q21.1	1	1
NR1H3	Del_15q22.33	1	1
NR1H3	Del_16p13.3	1	1
NR1H3	Del_19p13.3	1	1
ALPK2	VCX2	1	1
ALPK2	17q-Amp	1	1
ALPK2	20p-Amp	1	1
ALPK2	20q-Amp	1	1
ALPK2	2p-Amp	1	1
ALPK2	2q-Amp	1	1
ALPK2	18p-Del	1	1
ALPK2	18q-Del	1	1
ALPK2	5q-Del	1	1
ALPK2	Amp_2q33.1	1	1
ALPK2	Amp_10q22.3	1	1
ALPK2	Amp_17q12	1	1
ALPK2	Amp_17q24.1	1	1
ALPK2	Amp_20q11.21	1	1
ALPK2	Amp_20q12	1	1
ALPK2	Amp_20q13.31	1	1
ALPK2	Del_2p12	1	1
ALPK2	Del_2q22.1	1	1
ALPK2	Del_3p26.3	1	1
ALPK2	Del_5q12.1	1	1
ALPK2	Del_6q26	1	1
ALPK2	Del_10q21.1	1	1
ALPK2	Del_10q23.31	1	1
ALPK2	Del_10q25.2	1	1
ALPK2	Del_17p12	1	1
ALPK2	Del_18p11.31	1	1
ALPK2	Del_18q12.2	1	1
ALPK2	Del_18q21.2	1	1
ALPK2	Del_18q22.1	1	1
ALPK2	Del_19p13.3	1	1
ASXL1	C14orf184	1	1
ASXL1	HIST1H1T	1	1
ASXL1	16p-Amp	1	1
ASXL1	16q-Amp	1	1
ASXL1	17q-Amp	1	1
ASXL1	2p-Amp	1	1
ASXL1	2q-Amp	1	1
ASXL1	Amp_5q22.3	1	1
ASXL1	Amp_16p11.2	1	1
ASXL1	Amp_17q24.1	1	1
ASXL1	Del_2p12	1	1
ASXL1	Del_3p26.3	1	1
ASXL1	Del_18q21.2	1	1
ALG12	GRB2	1	1
ALG12	C11orf30	1	1
ALG12	PCBP1	1	1
ALG12	IFT57	1	1
ALG12	RSPH3	1	1
ALG12	RLIM	1	1
ALG12	VCX2	1	1
ALG12	C2orf29	1	1
ALG12	RBPJ	1	1
ALG12	DCLK2	1	1
ALG12	C14orf184	1	1
ALG12	FYN	1	1
ALG12	MAP4K3	1	1
ALG12	NEXN	1	1
ALG12	GMPS	1	1
ALG12	PTGDR	1	1
ALG12	BIRC3	1	1
ALG12	HIST1H1T	1	1
ALG12	GMNN	1	1
ALG12	13q-Amp	1	1
ALG12	16p-Amp	1	1
ALG12	16q-Amp	1	1
ALG12	17q-Amp	1	1
ALG12	2p-Amp	1	1
ALG12	2q-Amp	1	1
ALG12	6p-Amp	1	1
ALG12	9p-Amp	1	1
ALG12	14q-Del	1	1
ALG12	15q-Del	1	1
ALG12	17p-Del	1	1
ALG12	1p-Del	1	1
ALG12	20p-Del	1	1
ALG12	21q-Del	1	1
ALG12	22q-Del	1	1
ALG12	4p-Del	1	1
ALG12	4q-Del	1	1
ALG12	5q-Del	1	1
ALG12	8p-Del	1	1
ALG12	Amp_2q33.1	1	1
ALG12	Amp_6p21.1	1	1
ALG12	Amp_10q22.3	1	1
ALG12	Amp_11p15.5	1	1
ALG12	Amp_13q12.13	1	1
ALG12	Amp_13q12.2	1	1
ALG12	Amp_16p11.2	1	1
ALG12	Amp_17q12	1	1
ALG12	Amp_17q24.1	1	1
ALG12	Amp_19p13.2	1	1
ALG12	Del_1p36.11	1	1
ALG12	Del_1p33	1	1
ALG12	Del_1p13.2	1	1
ALG12	Del_2p12	1	1
ALG12	Del_2q22.1	1	1
ALG12	Del_3p26.3	1	1
ALG12	Del_4p16.2	1	1
ALG12	Del_4q22.1	1	1
ALG12	Del_4q35.1	1	1
ALG12	Del_5q12.1	1	1
ALG12	Del_5q21.2	1	1
ALG12	Del_6p25.3	1	1
ALG12	Del_6q26	1	1
ALG12	Del_7q31.1	1	1
ALG12	Del_8p23.2	1	1
ALG12	Del_8p22	1	1
ALG12	Del_10q21.1	1	1
ALG12	Del_10q23.31	1	1
ALG12	Del_12p13.1	1	1
ALG12	Del_14q11.2	1	1
ALG12	Del_14q31.1	1	1
ALG12	Del_15q11.2	1	1
ALG12	Del_15q15.2	1	1
ALG12	Del_15q21.1	1	1
ALG12	Del_15q22.33	1	1
ALG12	Del_16p13.3	1	1
ALG12	Del_17p12	1	1
ALG12	Del_17q24.3	1	1
ALG12	Del_19p13.3	1	1
ALG12	Del_21q11.2	1	1
ALG12	Del_22q13.32	1	1
PTCH1	18p-Del	1	1
PTCH1	18q-Del	1	1
PTCH1	Del_2p12	1	1
PTCH1	Del_6q26	1	1
PTCH1	Del_8q11.1	1	1
PTCH1	Del_18q12.2	1	1
PTCH1	Del_18q21.2	1	1
PTCH1	Del_18q22.1	1	1
GRB2	C2orf29	1	1
GRB2	GPATCH8	1	1
GRB2	CDK12	1	1
GRB2	GMPS	1	1
GRB2	PRPS1	1	1
GRB2	IDH1	1	1
GRB2	12p-Amp	1	1
GRB2	16p-Amp	1	1
GRB2	17q-Amp	1	1
GRB2	1q-Amp	1	1
GRB2	2q-Amp	1	1
GRB2	14q-Del	1	1
GRB2	20p-Del	1	1
GRB2	21q-Del	1	1
GRB2	22q-Del	1	1
GRB2	4p-Del	1	1
GRB2	4q-Del	1	1
GRB2	5q-Del	1	1
GRB2	8p-Del	1	1
GRB2	Amp_1q31.1	1	1
GRB2	Amp_2q33.1	1	1
GRB2	Amp_5q22.3	1	1
GRB2	Amp_11p15.5	1	1
GRB2	Amp_12p13.32	1	1
GRB2	Amp_16p11.2	1	1
GRB2	Amp_17q12	1	1
GRB2	Amp_17q24.1	1	1
GRB2	Amp_19p13.2	1	1
GRB2	Del_2p12	1	1
GRB2	Del_2q22.1	1	1
GRB2	Del_3p26.3	1	1
GRB2	Del_4q22.1	1	1
GRB2	Del_4q35.1	1	1
GRB2	Del_5q12.1	1	1
GRB2	Del_6p25.3	1	1
GRB2	Del_6q26	1	1
GRB2	Del_7q31.1	1	1
GRB2	Del_8p22	1	1
GRB2	Del_8q11.1	1	1
GRB2	Del_10q21.1	1	1
GRB2	Del_10q23.31	1	1
GRB2	Del_10q25.2	1	1
GRB2	Del_12p13.1	1	1
GRB2	Del_14q11.2	1	1
GRB2	Del_14q31.1	1	1
GRB2	Del_15q15.2	1	1
GRB2	Del_15q21.1	1	1
GRB2	Del_16p13.3	1	1
GRB2	Del_17q24.3	1	1
GRB2	Del_19p13.3	1	1
GRB2	Del_22q13.32	1	1
NLRC4	VCX2	1	1
NLRC4	16p-Amp	1	1
NLRC4	16q-Amp	1	1
NLRC4	2q-Amp	1	1
NLRC4	17p-Del	1	1
NLRC4	18p-Del	1	1
NLRC4	18q-Del	1	1
NLRC4	1p-Del	1	1
NLRC4	4q-Del	1	1
NLRC4	5q-Del	1	1
NLRC4	Amp_2q33.1	1	1
NLRC4	Amp_5q22.3	1	1
NLRC4	Amp_17q12	1	1
NLRC4	Amp_17q24.1	1	1
NLRC4	Del_1p13.2	1	1
NLRC4	Del_2p12	1	1
NLRC4	Del_2q22.1	1	1
NLRC4	Del_3p26.3	1	1
NLRC4	Del_6q26	1	1
NLRC4	Del_7q31.1	1	1
NLRC4	Del_8q11.1	1	1
NLRC4	Del_12p13.1	1	1
NLRC4	Del_17p12	1	1
NLRC4	Del_17q24.3	1	1
NLRC4	Del_18q12.2	1	1
NLRC4	Del_18q21.2	1	1
NLRC4	Del_18q22.1	1	1
NLRC4	Del_19p13.3	1	1
PLAGL2	PCBP1	1	1
PLAGL2	RSPH3	1	1
PLAGL2	C2orf29	1	1
PLAGL2	RBBP7	1	1
PLAGL2	L1TD1	1	1
PLAGL2	DCLK2	1	1
PLAGL2	FKBP9	1	1
PLAGL2	C14orf184	1	1
PLAGL2	FYN	1	1
PLAGL2	MAP4K3	1	1
PLAGL2	NEXN	1	1
PLAGL2	GMPS	1	1
PLAGL2	HIST1H1T	1	1
PLAGL2	ZNF486	1	1
PLAGL2	GMNN	1	1
PLAGL2	16p-Amp	1	1
PLAGL2	16q-Amp	1	1
PLAGL2	17q-Amp	1	1
PLAGL2	1q-Amp	1	1
PLAGL2	2p-Amp	1	1
PLAGL2	2q-Amp	1	1
PLAGL2	6p-Amp	1	1
PLAGL2	9p-Amp	1	1
PLAGL2	14q-Del	1	1
PLAGL2	15q-Del	1	1
PLAGL2	17p-Del	1	1
PLAGL2	18p-Del	1	1
PLAGL2	18q-Del	1	1
PLAGL2	1p-Del	1	1
PLAGL2	20p-Del	1	1
PLAGL2	22q-Del	1	1
PLAGL2	4p-Del	1	1
PLAGL2	4q-Del	1	1
PLAGL2	5q-Del	1	1
PLAGL2	8p-Del	1	1
PLAGL2	Amp_1q31.1	1	1
PLAGL2	Amp_2q33.1	1	1
PLAGL2	Amp_6p21.1	1	1
PLAGL2	Amp_10q22.3	1	1
PLAGL2	Amp_11p15.5	1	1
PLAGL2	Amp_16p11.2	1	1
PLAGL2	Amp_17q12	1	1
PLAGL2	Amp_17q24.1	1	1
PLAGL2	Amp_19p13.2	1	1
PLAGL2	Del_1p36.11	1	1
PLAGL2	Del_1p33	1	1
PLAGL2	Del_1p13.2	1	1
PLAGL2	Del_2p12	1	1
PLAGL2	Del_2q22.1	1	1
PLAGL2	Del_3p26.3	1	1
PLAGL2	Del_3p14.2	1	1
PLAGL2	Del_3q26.31	1	1
PLAGL2	Del_4p16.2	1	1
PLAGL2	Del_4q22.1	1	1
PLAGL2	Del_4q35.1	1	1
PLAGL2	Del_5q12.1	1	1
PLAGL2	Del_6p25.3	1	1
PLAGL2	Del_6q26	1	1
PLAGL2	Del_7q31.1	1	1
PLAGL2	Del_8q11.1	1	1
PLAGL2	Del_10q21.1	1	1
PLAGL2	Del_10q23.31	1	1
PLAGL2	Del_10q25.2	1	1
PLAGL2	Del_14q11.2	1	1
PLAGL2	Del_14q31.1	1	1
PLAGL2	Del_15q11.2	1	1
PLAGL2	Del_15q15.2	1	1
PLAGL2	Del_15q21.1	1	1
PLAGL2	Del_15q22.33	1	1
PLAGL2	Del_16p13.3	1	1
PLAGL2	Del_17p12	1	1
PLAGL2	Del_17q24.3	1	1
PLAGL2	Del_18p11.31	1	1
PLAGL2	Del_18q12.2	1	1
PLAGL2	Del_18q21.2	1	1
PLAGL2	Del_18q22.1	1	1
PLAGL2	Del_19p13.3	1	1
PLAGL2	Del_22q13.32	1	1
C11orf30	C14orf184	1	1
C11orf30	PRPS1	1	1
C11orf30	HIST1H1T	1	1
C11orf30	GMNN	1	1
C11orf30	13q-Amp	1	1
C11orf30	16p-Amp	1	1
C11orf30	16q-Amp	1	1
C11orf30	1q-Amp	1	1
C11orf30	20q-Amp	1	1
C11orf30	2q-Amp	1	1
C11orf30	6p-Amp	1	1
C11orf30	7q-Amp	1	1
C11orf30	9p-Amp	1	1
C11orf30	1p-Del	1	1
C11orf30	20p-Del	1	1
C11orf30	4p-Del	1	1
C11orf30	4q-Del	1	1
C11orf30	5q-Del	1	1
C11orf30	Amp_1q31.1	1	1
C11orf30	Amp_5q22.3	1	1
C11orf30	Amp_6p21.1	1	1
C11orf30	Amp_10q22.3	1	1
C11orf30	Amp_13q12.13	1	1
C11orf30	Amp_13q12.2	1	1
C11orf30	Amp_13q22.1	1	1
C11orf30	Amp_16p11.2	1	1
C11orf30	Amp_19p13.2	1	1
C11orf30	Amp_20q11.21	1	1
C11orf30	Amp_20q12	1	1
C11orf30	Amp_20q13.31	1	1
C11orf30	Del_1p33	1	1
C11orf30	Del_2p12	1	1
C11orf30	Del_2q22.1	1	1
C11orf30	Del_3p26.3	1	1
C11orf30	Del_3q26.31	1	1
C11orf30	Del_4p16.2	1	1
C11orf30	Del_4q35.1	1	1
C11orf30	Del_5q12.1	1	1
C11orf30	Del_5q21.2	1	1
C11orf30	Del_6q26	1	1
C11orf30	Del_8q11.1	1	1
C11orf30	Del_10q21.1	1	1
C11orf30	Del_10q23.31	1	1
C11orf30	Del_10q25.2	1	1
C11orf30	Del_16p13.3	1	1
C11orf30	Del_17q24.3	1	1
C11orf30	Del_18p11.31	1	1
C11orf30	Del_18q21.2	1	1
C11orf30	Del_18q22.1	1	1
DIP2B	VCX2	1	1
DIP2B	PRPS1	1	1
DIP2B	IDH1	1	1
DIP2B	2p-Amp	1	1
DIP2B	2q-Amp	1	1
DIP2B	8p-Amp	1	1
DIP2B	5q-Del	1	1
DIP2B	Amp_2q33.1	1	1
DIP2B	Amp_10q22.3	1	1
DIP2B	Amp_11p15.5	1	1
DIP2B	Del_2p12	1	1
DIP2B	Del_8q11.1	1	1
DIP2B	Del_12p13.1	1	1
DIP2B	Del_16p13.3	1	1
PRRG1	RSPH3	1	1
PRRG1	C14orf184	1	1
PRRG1	16p-Amp	1	1
PRRG1	16q-Amp	1	1
PRRG1	17q-Amp	1	1
PRRG1	2p-Amp	1	1
PRRG1	2q-Amp	1	1
PRRG1	1p-Del	1	1
PRRG1	20p-Del	1	1
PRRG1	21q-Del	1	1
PRRG1	22q-Del	1	1
PRRG1	5q-Del	1	1
PRRG1	Amp_2q33.1	1	1
PRRG1	Amp_10q22.3	1	1
PRRG1	Amp_11p15.5	1	1
PRRG1	Amp_19p13.2	1	1
PRRG1	Amp_20q13.31	1	1
PRRG1	Del_2p12	1	1
PRRG1	Del_2q22.1	1	1
PRRG1	Del_3p26.3	1	1
PRRG1	Del_3q26.31	1	1
PRRG1	Del_4q35.1	1	1
PRRG1	Del_5q12.1	1	1
PRRG1	Del_6p25.3	1	1
PRRG1	Del_6q26	1	1
PRRG1	Del_7q31.1	1	1
PRRG1	Del_10q21.1	1	1
PRRG1	Del_10q23.31	1	1
PRRG1	Del_10q25.2	1	1
PRRG1	Del_16p13.3	1	1
PRRG1	Del_17q24.3	1	1
PRRG1	Del_19p13.3	1	1
PRRG1	Del_21q11.2	1	1
PRRG1	Del_22q13.32	1	1
PCBP1	IFT57	1	1
PCBP1	RSPH3	1	1
PCBP1	VCX2	1	1
PCBP1	DDX26B	1	1
PCBP1	C14orf184	1	1
PCBP1	BCORL1	1	1
PCBP1	GPATCH8	1	1
PCBP1	MAP4K3	1	1
PCBP1	PRPS1	1	1
PCBP1	HIST1H1T	1	1
PCBP1	GMNN	1	1
PCBP1	16p-Amp	1	1
PCBP1	16q-Amp	1	1
PCBP1	17q-Amp	1	1
PCBP1	1q-Amp	1	1
PCBP1	2p-Amp	1	1
PCBP1	2q-Amp	1	1
PCBP1	6p-Amp	1	1
PCBP1	8p-Amp	1	1
PCBP1	9p-Amp	1	1
PCBP1	1p-Del	1	1
PCBP1	20p-Del	1	1
PCBP1	22q-Del	1	1
PCBP1	4p-Del	1	1
PCBP1	5q-Del	1	1
PCBP1	Amp_1q31.1	1	1
PCBP1	Amp_6p21.1	1	1
PCBP1	Amp_10q22.3	1	1
PCBP1	Amp_16p11.2	1	1
PCBP1	Amp_17q12	1	1
PCBP1	Amp_17q24.1	1	1
PCBP1	Amp_19p13.2	1	1
PCBP1	Del_1p33	1	1
PCBP1	Del_1p13.2	1	1
PCBP1	Del_2p12	1	1
PCBP1	Del_2q22.1	1	1
PCBP1	Del_3q26.31	1	1
PCBP1	Del_4p16.2	1	1
PCBP1	Del_5q21.2	1	1
PCBP1	Del_7q31.1	1	1
PCBP1	Del_8q11.1	1	1
PCBP1	Del_10q25.2	1	1
PCBP1	Del_12p13.1	1	1
PCBP1	Del_14q11.2	1	1
PCBP1	Del_16p13.3	1	1
PCBP1	Del_16q23.1	1	1
PCBP1	Del_22q13.32	1	1
PIK3R1	2p-Amp	1	1
PIK3R1	2q-Amp	1	1
PIK3R1	6p-Amp	1	1
PIK3R1	1p-Del	1	1
PIK3R1	Amp_6p21.1	1	1
PIK3R1	Del_1p33	1	1
PIK3R1	Del_2p12	1	1
PIK3R1	Del_8q11.1	1	1
IFT57	RLIM	1	1
IFT57	VCX2	1	1
IFT57	C2orf29	1	1
IFT57	RBPJ	1	1
IFT57	ALDH1A3	1	1
IFT57	PRPS1	1	1
IFT57	PTGDR	1	1
IFT57	HIST1H1T	1	1
IFT57	GMNN	1	1
IFT57	16p-Amp	1	1
IFT57	16q-Amp	1	1
IFT57	17q-Amp	1	1
IFT57	1q-Amp	1	1
IFT57	2q-Amp	1	1
IFT57	14q-Del	1	1
IFT57	15q-Del	1	1
IFT57	1p-Del	1	1
IFT57	22q-Del	1	1
IFT57	4p-Del	1	1
IFT57	4q-Del	1	1
IFT57	5q-Del	1	1
IFT57	8p-Del	1	1
IFT57	Amp_1q31.1	1	1
IFT57	Amp_5q22.3	1	1
IFT57	Amp_11p15.5	1	1
IFT57	Amp_16p11.2	1	1
IFT57	Amp_17q12	1	1
IFT57	Amp_17q24.1	1	1
IFT57	Amp_19p13.2	1	1
IFT57	Del_1p33	1	1
IFT57	Del_1p13.2	1	1
IFT57	Del_2p12	1	1
IFT57	Del_2q22.1	1	1
IFT57	Del_3p26.3	1	1
IFT57	Del_4p16.2	1	1
IFT57	Del_4q22.1	1	1
IFT57	Del_4q35.1	1	1
IFT57	Del_5q12.1	1	1
IFT57	Del_5q21.2	1	1
IFT57	Del_6p25.3	1	1
IFT57	Del_6q26	1	1
IFT57	Del_7q31.1	1	1
IFT57	Del_8q11.1	1	1
IFT57	Del_10q21.1	1	1
IFT57	Del_10q25.2	1	1
IFT57	Del_12p13.1	1	1
IFT57	Del_14q11.2	1	1
IFT57	Del_14q31.1	1	1
IFT57	Del_15q11.2	1	1
IFT57	Del_15q15.2	1	1
IFT57	Del_15q21.1	1	1
IFT57	Del_15q22.33	1	1
IFT57	Del_17q24.3	1	1
IFT57	Del_19p13.3	1	1
IFT57	Del_22q13.32	1	1
RSPH3	RLIM	1	1
RSPH3	VCX2	1	1
RSPH3	DDX26B	1	1
RSPH3	RBPJ	1	1
RSPH3	DCLK2	1	1
RSPH3	HLA-A	1	1
RSPH3	PRPS1	1	1
RSPH3	PTGDR	1	1
RSPH3	HIST1H1T	1	1
RSPH3	IDH1	1	1
RSPH3	12p-Amp	1	1
RSPH3	16p-Amp	1	1
RSPH3	16q-Amp	1	1
RSPH3	15q-Del	1	1
RSPH3	1p-Del	1	1
RSPH3	20p-Del	1	1
RSPH3	4p-Del	1	1
RSPH3	4q-Del	1	1
RSPH3	5q-Del	1	1
RSPH3	Amp_5q22.3	1	1
RSPH3	Amp_11p15.5	1	1
RSPH3	Amp_16p11.2	1	1
RSPH3	Amp_19p13.2	1	1
RSPH3	Del_1p33	1	1
RSPH3	Del_1p13.2	1	1
RSPH3	Del_2p12	1	1
RSPH3	Del_3p26.3	1	1
RSPH3	Del_4p16.2	1	1
RSPH3	Del_4q22.1	1	1
RSPH3	Del_4q35.1	1	1
RSPH3	Del_6q26	1	1
RSPH3	Del_7q31.1	1	1
RSPH3	Del_8q11.1	1	1
RSPH3	Del_10q23.31	1	1
RSPH3	Del_15q11.2	1	1
RSPH3	Del_15q15.2	1	1
RSPH3	Del_15q21.1	1	1
RSPH3	Del_15q22.33	1	1
RSPH3	Del_16p13.3	1	1
RSPH3	Del_16q23.1	1	1
RSPH3	Del_19p13.3	1	1
RLIM	C14orf184	1	1
RLIM	BCORL1	1	1
RLIM	HIST1H1T	1	1
RLIM	GMNN	1	1
RLIM	16p-Amp	1	1
RLIM	16q-Amp	1	1
RLIM	17q-Amp	1	1
RLIM	1q-Amp	1	1
RLIM	2p-Amp	1	1
RLIM	2q-Amp	1	1
RLIM	8p-Amp	1	1
RLIM	15q-Del	1	1
RLIM	20p-Del	1	1
RLIM	Amp_2q33.1	1	1
RLIM	Amp_5q22.3	1	1
RLIM	Amp_10q22.3	1	1
RLIM	Amp_17q12	1	1
RLIM	Amp_17q24.1	1	1
RLIM	Del_2p12	1	1
RLIM	Del_2q22.1	1	1
RLIM	Del_3p26.3	1	1
RLIM	Del_3p14.2	1	1
RLIM	Del_6p25.3	1	1
RLIM	Del_6q26	1	1
RLIM	Del_7q31.1	1	1
RLIM	Del_10q21.1	1	1
RLIM	Del_10q23.31	1	1
RLIM	Del_10q25.2	1	1
RLIM	Del_16q23.1	1	1
RLIM	Del_17q24.3	1	1
ROS1	16p-Amp	1	1
ROS1	1q-Amp	1	1
ROS1	2p-Amp	1	1
ROS1	2q-Amp	1	1
ROS1	Amp_20q11.21	1	1
ROS1	Amp_20q12	1	1
ROS1	Amp_20q13.31	1	1
ROS1	Del_2p12	1	1
ROS1	Del_2q22.1	1	1
ROS1	Del_6q26	1	1
ROS1	Del_8q11.1	1	1
ROS1	Del_14q11.2	1	1
ROS1	Del_14q31.1	1	1
ROS1	Del_16p13.3	1	1
ROS1	Del_18q21.2	1	1
MPHOSPH10	VCX2	1	1
MPHOSPH10	C2orf29	1	1
MPHOSPH10	C14orf184	1	1
MPHOSPH10	MAP4K3	1	1
MPHOSPH10	HIST1H1T	1	1
MPHOSPH10	GMNN	1	1
MPHOSPH10	16p-Amp	1	1
MPHOSPH10	16q-Amp	1	1
MPHOSPH10	17q-Amp	1	1
MPHOSPH10	1q-Amp	1	1
MPHOSPH10	2p-Amp	1	1
MPHOSPH10	2q-Amp	1	1
MPHOSPH10	6p-Amp	1	1
MPHOSPH10	14q-Del	1	1
MPHOSPH10	15q-Del	1	1
MPHOSPH10	17p-Del	1	1
MPHOSPH10	18p-Del	1	1
MPHOSPH10	18q-Del	1	1
MPHOSPH10	1p-Del	1	1
MPHOSPH10	20p-Del	1	1
MPHOSPH10	21q-Del	1	1
MPHOSPH10	22q-Del	1	1
MPHOSPH10	4p-Del	1	1
MPHOSPH10	4q-Del	1	1
MPHOSPH10	5q-Del	1	1
MPHOSPH10	Amp_1q31.1	1	1
MPHOSPH10	Amp_2q33.1	1	1
MPHOSPH10	Amp_6p21.1	1	1
MPHOSPH10	Amp_17q12	1	1
MPHOSPH10	Amp_17q24.1	1	1
MPHOSPH10	Del_1p36.11	1	1
MPHOSPH10	Del_1p33	1	1
MPHOSPH10	Del_1p13.2	1	1
MPHOSPH10	Del_2p12	1	1
MPHOSPH10	Del_2q22.1	1	1
MPHOSPH10	Del_3p26.3	1	1
MPHOSPH10	Del_3q26.31	1	1
MPHOSPH10	Del_4p16.2	1	1
MPHOSPH10	Del_4q22.1	1	1
MPHOSPH10	Del_4q35.1	1	1
MPHOSPH10	Del_5q12.1	1	1
MPHOSPH10	Del_6q26	1	1
MPHOSPH10	Del_8q11.1	1	1
MPHOSPH10	Del_10q21.1	1	1
MPHOSPH10	Del_10q25.2	1	1
MPHOSPH10	Del_12p13.1	1	1
MPHOSPH10	Del_14q31.1	1	1
MPHOSPH10	Del_15q22.33	1	1
MPHOSPH10	Del_16p13.3	1	1
MPHOSPH10	Del_17p12	1	1
MPHOSPH10	Del_17q24.3	1	1
MPHOSPH10	Del_18p11.31	1	1
MPHOSPH10	Del_18q21.2	1	1
MPHOSPH10	Del_18q22.1	1	1
MPHOSPH10	Del_19p13.3	1	1
MPHOSPH10	Del_22q13.32	1	1
VCX2	RBPJ	1	1
VCX2	SLC26A8	1	1
VCX2	RBBP7	1	1
VCX2	L1TD1	1	1
VCX2	DCLK2	1	1
VCX2	C14orf184	1	1
VCX2	FYN	1	1
VCX2	ALDH1A3	1	1
VCX2	BCORL1	1	1
VCX2	MAP4K3	1	1
VCX2	SETD2	1	1
VCX2	NEXN	1	1
VCX2	GMPS	1	1
VCX2	PRPS1	1	1
VCX2	BIRC3	1	1
VCX2	HIST1H1T	1	1
VCX2	ZNF486	1	1
VCX2	GMNN	1	1
VCX2	12p-Amp	1	1
VCX2	16p-Amp	1	1
VCX2	16q-Amp	1	1
VCX2	17q-Amp	1	1
VCX2	1q-Amp	1	1
VCX2	2p-Amp	1	1
VCX2	2q-Amp	1	1
VCX2	6p-Amp	1	1
VCX2	9p-Amp	1	1
VCX2	20p-Del	1	1
VCX2	Amp_1q31.1	1	1
VCX2	Amp_16p11.2	1	1
VCX2	Amp_17q12	1	1
VCX2	Amp_17q24.1	1	1
VCX2	Del_2p12	1	1
VCX2	Del_2q22.1	1	1
VCX2	Del_3p14.2	1	1
VCX2	Del_3q26.31	1	1
VCX2	Del_6p25.3	1	1
VCX2	Del_6q26	1	1
VCX2	Del_7q31.1	1	1
VCX2	Del_8q11.1	1	1
VCX2	Del_10q23.31	1	1
VCX2	Del_10q25.2	1	1
VCX2	Del_16p13.3	1	1
VCX2	Del_16q23.1	1	1
VCX2	Del_17q24.3	1	1
VCX2	Del_19p13.3	1	1
C2orf29	DDX26B	1	1
C2orf29	RBPJ	1	1
C2orf29	DCLK2	1	1
C2orf29	HLA-A	1	1
C2orf29	GPATCH8	1	1
C2orf29	PTGDR	1	1
C2orf29	HIST1H1T	1	1
C2orf29	16p-Amp	1	1
C2orf29	16q-Amp	1	1
C2orf29	17q-Amp	1	1
C2orf29	2p-Amp	1	1
C2orf29	2q-Amp	1	1
C2orf29	14q-Del	1	1
C2orf29	1p-Del	1	1
C2orf29	20p-Del	1	1
C2orf29	4p-Del	1	1
C2orf29	5q-Del	1	1
C2orf29	Amp_2q33.1	1	1
C2orf29	Amp_16p11.2	1	1
C2orf29	Amp_17q12	1	1
C2orf29	Amp_19p13.2	1	1
C2orf29	Del_1p33	1	1
C2orf29	Del_2p12	1	1
C2orf29	Del_3p26.3	1	1
C2orf29	Del_4p16.2	1	1
C2orf29	Del_7q31.1	1	1
C2orf29	Del_10q21.1	1	1
C2orf29	Del_12p13.1	1	1
C2orf29	Del_14q11.2	1	1
C2orf29	Del_16q23.1	1	1
C2orf29	Del_17q24.3	1	1
DDX26B	DCLK2	1	1
DDX26B	C14orf184	1	1
DDX26B	PTGDR	1	1
DDX26B	IDH1	1	1
DDX26B	GMNN	1	1
DDX26B	16p-Amp	1	1
DDX26B	16q-Amp	1	1
DDX26B	17q-Amp	1	1
DDX26B	20q-Amp	1	1
DDX26B	2p-Amp	1	1
DDX26B	2q-Amp	1	1
DDX26B	6p-Amp	1	1
DDX26B	7p-Amp	1	1
DDX26B	7q-Amp	1	1
DDX26B	14q-Del	1	1
DDX26B	15q-Del	1	1
DDX26B	17p-Del	1	1
DDX26B	18p-Del	1	1
DDX26B	18q-Del	1	1
DDX26B	1p-Del	1	1
DDX26B	20p-Del	1	1
DDX26B	4p-Del	1	1
DDX26B	4q-Del	1	1
DDX26B	5q-Del	1	1
DDX26B	8p-Del	1	1
DDX26B	Amp_2q33.1	1	1
DDX26B	Amp_5q22.3	1	1
DDX26B	Amp_6p21.1	1	1
DDX26B	Amp_10q22.3	1	1
DDX26B	Amp_16p11.2	1	1
DDX26B	Amp_17q12	1	1
DDX26B	Amp_17q24.1	1	1
DDX26B	Amp_19p13.2	1	1
DDX26B	Amp_20p11.21	1	1
DDX26B	Amp_20q11.21	1	1
DDX26B	Amp_20q12	1	1
DDX26B	Amp_20q13.31	1	1
DDX26B	Del_1p13.2	1	1
DDX26B	Del_2p12	1	1
DDX26B	Del_2q22.1	1	1
DDX26B	Del_3p26.3	1	1
DDX26B	Del_3q26.31	1	1
DDX26B	Del_4p16.2	1	1
DDX26B	Del_4q22.1	1	1
DDX26B	Del_4q35.1	1	1
DDX26B	Del_5q12.1	1	1
DDX26B	Del_5q21.2	1	1
DDX26B	Del_6q26	1	1
DDX26B	Del_7q31.1	1	1
DDX26B	Del_8p22	1	1
DDX26B	Del_8q11.1	1	1
DDX26B	Del_14q11.2	1	1
DDX26B	Del_14q31.1	1	1
DDX26B	Del_15q22.33	1	1
DDX26B	Del_16p13.3	1	1
DDX26B	Del_17p12	1	1
DDX26B	Del_17q24.3	1	1
DDX26B	Del_18p11.31	1	1
DDX26B	Del_18q12.2	1	1
DDX26B	Del_18q21.2	1	1
DDX26B	Del_18q22.1	1	1
DDX26B	Del_19p13.3	1	1
RBPJ	C14orf184	1	1
RBPJ	PRPS1	1	1
RBPJ	GMNN	1	1
RBPJ	16p-Amp	1	1
RBPJ	16q-Amp	1	1
RBPJ	1q-Amp	1	1
RBPJ	6p-Amp	1	1
RBPJ	15q-Del	1	1
RBPJ	4q-Del	1	1
RBPJ	5q-Del	1	1
RBPJ	Amp_5q22.3	1	1
RBPJ	Amp_6p21.1	1	1
RBPJ	Amp_10q22.3	1	1
RBPJ	Amp_11p15.5	1	1
RBPJ	Del_2p12	1	1
RBPJ	Del_3p26.3	1	1
RBPJ	Del_3p14.2	1	1
RBPJ	Del_3q26.31	1	1
RBPJ	Del_4q22.1	1	1
RBPJ	Del_5q12.1	1	1
RBPJ	Del_6p25.3	1	1
RBPJ	Del_6q26	1	1
RBPJ	Del_7q31.1	1	1
RBPJ	Del_8q11.1	1	1
RBPJ	Del_10q23.31	1	1
RBPJ	Del_10q25.2	1	1
RBPJ	Del_12p13.1	1	1
RBPJ	Del_15q11.2	1	1
RBPJ	Del_15q15.2	1	1
RBPJ	Del_15q21.1	1	1
RBPJ	Del_15q22.33	1	1
RBPJ	Del_16p13.3	1	1
RBPJ	Del_16q23.1	1	1
RBPJ	Del_17p12	1	1
RBPJ	Del_17q24.3	1	1
RBPJ	Del_18q21.2	1	1
RBPJ	Del_18q22.1	1	1
RBPJ	Del_19p13.3	1	1
SLC26A8	C14orf184	1	1
SLC26A8	HIST1H1T	1	1
SLC26A8	13q-Amp	1	1
SLC26A8	16p-Amp	1	1
SLC26A8	16q-Amp	1	1
SLC26A8	1q-Amp	1	1
SLC26A8	20q-Amp	1	1
SLC26A8	6p-Amp	1	1
SLC26A8	9p-Amp	1	1
SLC26A8	14q-Del	1	1
SLC26A8	15q-Del	1	1
SLC26A8	18q-Del	1	1
SLC26A8	1p-Del	1	1
SLC26A8	20p-Del	1	1
SLC26A8	22q-Del	1	1
SLC26A8	4p-Del	1	1
SLC26A8	4q-Del	1	1
SLC26A8	5q-Del	1	1
SLC26A8	Amp_1q31.1	1	1
SLC26A8	Amp_5q22.3	1	1
SLC26A8	Amp_6p21.1	1	1
SLC26A8	Amp_10q22.3	1	1
SLC26A8	Amp_11p15.5	1	1
SLC26A8	Amp_13q12.13	1	1
SLC26A8	Amp_16p11.2	1	1
SLC26A8	Amp_19p13.2	1	1
SLC26A8	Amp_20q11.21	1	1
SLC26A8	Amp_20q12	1	1
SLC26A8	Amp_20q13.31	1	1
SLC26A8	Del_1p13.2	1	1
SLC26A8	Del_2p12	1	1
SLC26A8	Del_2q22.1	1	1
SLC26A8	Del_3p26.3	1	1
SLC26A8	Del_3q26.31	1	1
SLC26A8	Del_4p16.2	1	1
SLC26A8	Del_4q35.1	1	1
SLC26A8	Del_5q21.2	1	1
SLC26A8	Del_5q22.2	1	1
SLC26A8	Del_6q26	1	1
SLC26A8	Del_8q11.1	1	1
SLC26A8	Del_10q23.31	1	1
SLC26A8	Del_12p13.1	1	1
SLC26A8	Del_14q11.2	1	1
SLC26A8	Del_14q31.1	1	1
SLC26A8	Del_15q22.33	1	1
SLC26A8	Del_16p13.3	1	1
SLC26A8	Del_17p12	1	1
SLC26A8	Del_17q24.3	1	1
SLC26A8	Del_18q12.2	1	1
SLC26A8	Del_18q21.2	1	1
SLC26A8	Del_18q22.1	1	1
SLC26A8	Del_19p13.3	1	1
SLC26A8	Del_22q13.32	1	1
RBBP7	C14orf184	1	1
RBBP7	PRPS1	1	1
RBBP7	16p-Amp	1	1
RBBP7	16q-Amp	1	1
RBBP7	17q-Amp	1	1
RBBP7	20q-Amp	1	1
RBBP7	2p-Amp	1	1
RBBP7	2q-Amp	1	1
RBBP7	6p-Amp	1	1
RBBP7	7q-Amp	1	1
RBBP7	9p-Amp	1	1
RBBP7	15q-Del	1	1
RBBP7	1p-Del	1	1
RBBP7	20p-Del	1	1
RBBP7	5q-Del	1	1
RBBP7	Amp_2q33.1	1	1
RBBP7	Amp_5q22.3	1	1
RBBP7	Amp_6p21.1	1	1
RBBP7	Amp_17q12	1	1
RBBP7	Amp_20q12	1	1
RBBP7	Amp_20q13.31	1	1
RBBP7	Del_1p36.11	1	1
RBBP7	Del_1p33	1	1
RBBP7	Del_2p12	1	1
RBBP7	Del_2q22.1	1	1
RBBP7	Del_5q12.1	1	1
RBBP7	Del_5q21.2	1	1
RBBP7	Del_5q22.2	1	1
RBBP7	Del_7q31.1	1	1
RBBP7	Del_8q11.1	1	1
RBBP7	Del_12p13.1	1	1
RBBP7	Del_16p13.3	1	1
RB1	Del_2p12	1	1
RB1	Del_8q11.1	1	1
RB1	Del_18q21.2	1	1
L1TD1	C14orf184	1	1
L1TD1	IDH1	1	1
L1TD1	16p-Amp	1	1
L1TD1	16q-Amp	1	1
L1TD1	17q-Amp	1	1
L1TD1	1q-Amp	1	1
L1TD1	20q-Amp	1	1
L1TD1	2p-Amp	1	1
L1TD1	2q-Amp	1	1
L1TD1	6p-Amp	1	1
L1TD1	7p-Amp	1	1
L1TD1	7q-Amp	1	1
L1TD1	9p-Amp	1	1
L1TD1	14q-Del	1	1
L1TD1	15q-Del	1	1
L1TD1	22q-Del	1	1
L1TD1	4p-Del	1	1
L1TD1	4q-Del	1	1
L1TD1	5q-Del	1	1
L1TD1	Amp_1q31.1	1	1
L1TD1	Amp_2q33.1	1	1
L1TD1	Amp_5q22.3	1	1
L1TD1	Amp_6p21.1	1	1
L1TD1	Amp_10q22.3	1	1
L1TD1	Amp_13q12.13	1	1
L1TD1	Amp_16p11.2	1	1
L1TD1	Amp_19p13.2	1	1
L1TD1	Amp_20q12	1	1
L1TD1	Amp_20q13.31	1	1
L1TD1	Del_2p12	1	1
L1TD1	Del_3p26.3	1	1
L1TD1	Del_3q26.31	1	1
L1TD1	Del_4p16.2	1	1
L1TD1	Del_5q12.1	1	1
L1TD1	Del_5q22.2	1	1
L1TD1	Del_8q11.1	1	1
L1TD1	Del_10q21.1	1	1
L1TD1	Del_10q23.31	1	1
L1TD1	Del_12p13.1	1	1
L1TD1	Del_14q11.2	1	1
L1TD1	Del_14q31.1	1	1
L1TD1	Del_15q11.2	1	1
L1TD1	Del_15q15.2	1	1
L1TD1	Del_15q21.1	1	1
L1TD1	Del_15q22.33	1	1
L1TD1	Del_16p13.3	1	1
L1TD1	Del_17q24.3	1	1
L1TD1	Del_19p13.3	1	1
TOP2B	C14orf184	1	1
TOP2B	17q-Amp	1	1
TOP2B	2p-Amp	1	1
TOP2B	2q-Amp	1	1
TOP2B	6p-Amp	1	1
TOP2B	1p-Del	1	1
TOP2B	4p-Del	1	1
TOP2B	4q-Del	1	1
TOP2B	Amp_6p21.1	1	1
TOP2B	Amp_17q12	1	1
TOP2B	Amp_17q24.1	1	1
TOP2B	Amp_19p13.2	1	1
TOP2B	Del_1p13.2	1	1
TOP2B	Del_2p12	1	1
TOP2B	Del_2q22.1	1	1
TOP2B	Del_3p26.3	1	1
TOP2B	Del_3p14.2	1	1
TOP2B	Del_6q26	1	1
TOP2B	Del_8q11.1	1	1
TOP2B	Del_16p13.3	1	1
TOP2B	Del_17q24.3	1	1
TOP2B	Del_18q12.2	1	1
TOP2B	Del_18q21.2	1	1
DCLK2	C14orf184	1	1
DCLK2	GMNN	1	1
DCLK2	17q-Amp	1	1
DCLK2	1q-Amp	1	1
DCLK2	2p-Amp	1	1
DCLK2	2q-Amp	1	1
DCLK2	6p-Amp	1	1
DCLK2	9p-Amp	1	1
DCLK2	1p-Del	1	1
DCLK2	20p-Del	1	1
DCLK2	5q-Del	1	1
DCLK2	Amp_1q31.1	1	1
DCLK2	Amp_6p21.1	1	1
DCLK2	Amp_10q22.3	1	1
DCLK2	Amp_17q24.1	1	1
DCLK2	Del_2p12	1	1
DCLK2	Del_2q22.1	1	1
DCLK2	Del_3p26.3	1	1
DCLK2	Del_3q26.31	1	1
DCLK2	Del_5q12.1	1	1
DCLK2	Del_5q21.2	1	1
DCLK2	Del_5q22.2	1	1
DCLK2	Del_6q26	1	1
DCLK2	Del_8q11.1	1	1
DCLK2	Del_10q23.31	1	1
DCLK2	Del_10q25.2	1	1
DCLK2	Del_12p13.1	1	1
DCLK2	Del_16p13.3	1	1
DCLK2	Del_16q23.1	1	1
DCLK2	Del_17q24.3	1	1
DCLK2	Del_19p13.3	1	1
FKBP9	C14orf184	1	1
FKBP9	16p-Amp	1	1
FKBP9	16q-Amp	1	1
FKBP9	17q-Amp	1	1
FKBP9	20q-Amp	1	1
FKBP9	2p-Amp	1	1
FKBP9	2q-Amp	1	1
FKBP9	6p-Amp	1	1
FKBP9	9p-Amp	1	1
FKBP9	14q-Del	1	1
FKBP9	18q-Del	1	1
FKBP9	1p-Del	1	1
FKBP9	20p-Del	1	1
FKBP9	21q-Del	1	1
FKBP9	22q-Del	1	1
FKBP9	4q-Del	1	1
FKBP9	5q-Del	1	1
FKBP9	Amp_2q33.1	1	1
FKBP9	Amp_5q22.3	1	1
FKBP9	Amp_6p21.1	1	1
FKBP9	Amp_11p15.5	1	1
FKBP9	Amp_16p11.2	1	1
FKBP9	Amp_17q12	1	1
FKBP9	Amp_17q24.1	1	1
FKBP9	Amp_19p13.2	1	1
FKBP9	Amp_20q11.21	1	1
FKBP9	Amp_20q12	1	1
FKBP9	Amp_20q13.31	1	1
FKBP9	Del_1p33	1	1
FKBP9	Del_2p12	1	1
FKBP9	Del_3p26.3	1	1
FKBP9	Del_4q22.1	1	1
FKBP9	Del_5q12.1	1	1
FKBP9	Del_6q26	1	1
FKBP9	Del_7q31.1	1	1
FKBP9	Del_8q11.1	1	1
FKBP9	Del_10q23.31	1	1
FKBP9	Del_10q25.2	1	1
FKBP9	Del_12p13.1	1	1
FKBP9	Del_14q11.2	1	1
FKBP9	Del_18q12.2	1	1
FKBP9	Del_18q21.2	1	1
FKBP9	Del_18q22.1	1	1
FKBP9	Del_19p13.3	1	1
FKBP9	Del_21q11.2	1	1
FKBP9	Del_22q13.32	1	1
PTEN	18q-Del	1	1
PTEN	Del_2p12	1	1
C14orf184	HLA-A	1	1
C14orf184	FYN	1	1
C14orf184	GPATCH8	1	1
C14orf184	MAP4K3	1	1
C14orf184	SLC12A6	1	1
C14orf184	CDK12	1	1
C14orf184	NEXN	1	1
C14orf184	PRPS1	1	1
C14orf184	PTGDR	1	1
C14orf184	BIRC3	1	1
C14orf184	HIST1H1T	1	1
C14orf184	ZNF486	1	1
C14orf184	GMNN	1	1
C14orf184	17q-Amp	1	1
C14orf184	1q-Amp	1	1
C14orf184	2q-Amp	1	1
C14orf184	14q-Del	1	1
C14orf184	15q-Del	1	1
C14orf184	1p-Del	1	1
C14orf184	21q-Del	1	1
C14orf184	4p-Del	1	1
C14orf184	4q-Del	1	1
C14orf184	5q-Del	1	1
C14orf184	Amp_1q31.1	1	1
C14orf184	Amp_2q33.1	1	1
C14orf184	Amp_5q22.3	1	1
C14orf184	Amp_11p15.5	1	1
C14orf184	Amp_17q24.1	1	1
C14orf184	Amp_19p13.2	1	1
C14orf184	Del_1p13.2	1	1
C14orf184	Del_2p12	1	1
C14orf184	Del_2q22.1	1	1
C14orf184	Del_3p26.3	1	1
C14orf184	Del_4p16.2	1	1
C14orf184	Del_4q22.1	1	1
C14orf184	Del_5q12.1	1	1
C14orf184	Del_7q31.1	1	1
C14orf184	Del_8q11.1	1	1
C14orf184	Del_10q21.1	1	1
C14orf184	Del_10q25.2	1	1
C14orf184	Del_12p13.1	1	1
C14orf184	Del_14q11.2	1	1
C14orf184	Del_14q31.1	1	1
C14orf184	Del_15q11.2	1	1
C14orf184	Del_15q15.2	1	1
C14orf184	Del_15q21.1	1	1
C14orf184	Del_15q22.33	1	1
C14orf184	Del_16p13.3	1	1
C14orf184	Del_16q23.1	1	1
C14orf184	Del_17q24.3	1	1
C14orf184	Del_19p13.3	1	1
C14orf184	Del_21q11.2	1	1
HLA-A	HIST1H1T	1	1
HLA-A	GMNN	1	1
HLA-A	12p-Amp	1	1
HLA-A	16p-Amp	1	1
HLA-A	16q-Amp	1	1
HLA-A	17q-Amp	1	1
HLA-A	1q-Amp	1	1
HLA-A	20p-Amp	1	1
HLA-A	20q-Amp	1	1
HLA-A	2p-Amp	1	1
HLA-A	2q-Amp	1	1
HLA-A	6p-Amp	1	1
HLA-A	8p-Amp	1	1
HLA-A	9p-Amp	1	1
HLA-A	14q-Del	1	1
HLA-A	15q-Del	1	1
HLA-A	18p-Del	1	1
HLA-A	1p-Del	1	1
HLA-A	20p-Del	1	1
HLA-A	5q-Del	1	1
HLA-A	Amp_1q31.1	1	1
HLA-A	Amp_2q33.1	1	1
HLA-A	Amp_6p21.1	1	1
HLA-A	Amp_8p11.23	1	1
HLA-A	Amp_10q22.3	1	1
HLA-A	Amp_11p15.5	1	1
HLA-A	Amp_16p11.2	1	1
HLA-A	Amp_17q12	1	1
HLA-A	Amp_17q24.1	1	1
HLA-A	Amp_20p11.21	1	1
HLA-A	Amp_20q11.21	1	1
HLA-A	Amp_20q12	1	1
HLA-A	Amp_20q13.31	1	1
HLA-A	Del_1p33	1	1
HLA-A	Del_1p13.2	1	1
HLA-A	Del_2p12	1	1
HLA-A	Del_2q22.1	1	1
HLA-A	Del_5q12.1	1	1
HLA-A	Del_5q21.2	1	1
HLA-A	Del_6p25.3	1	1
HLA-A	Del_6q26	1	1
HLA-A	Del_7q31.1	1	1
HLA-A	Del_8q11.1	1	1
HLA-A	Del_14q11.2	1	1
HLA-A	Del_14q31.1	1	1
HLA-A	Del_15q11.2	1	1
HLA-A	Del_15q15.2	1	1
HLA-A	Del_15q21.1	1	1
HLA-A	Del_15q22.33	1	1
HLA-A	Del_16p13.3	1	1
HLA-A	Del_18p11.31	1	1
BMPR2	GMNN	1	1
BMPR2	13q-Amp	1	1
BMPR2	16p-Amp	1	1
BMPR2	16q-Amp	1	1
BMPR2	17q-Amp	1	1
BMPR2	1q-Amp	1	1
BMPR2	20p-Amp	1	1
BMPR2	20q-Amp	1	1
BMPR2	2p-Amp	1	1
BMPR2	2q-Amp	1	1
BMPR2	14q-Del	1	1
BMPR2	15q-Del	1	1
BMPR2	17p-Del	1	1
BMPR2	18p-Del	1	1
BMPR2	18q-Del	1	1
BMPR2	22q-Del	1	1
BMPR2	4q-Del	1	1
BMPR2	5q-Del	1	1
BMPR2	Amp_2q33.1	1	1
BMPR2	Amp_10q22.3	1	1
BMPR2	Amp_11p15.5	1	1
BMPR2	Amp_13q12.13	1	1
BMPR2	Amp_13q12.2	1	1
BMPR2	Amp_13q22.1	1	1
BMPR2	Amp_16p11.2	1	1
BMPR2	Amp_17q12	1	1
BMPR2	Amp_17q24.1	1	1
BMPR2	Amp_20p11.21	1	1
BMPR2	Amp_20q11.21	1	1
BMPR2	Amp_20q12	1	1
BMPR2	Amp_20q13.31	1	1
BMPR2	Del_2p12	1	1
BMPR2	Del_2q22.1	1	1
BMPR2	Del_3p26.3	1	1
BMPR2	Del_3q26.31	1	1
BMPR2	Del_6q26	1	1
BMPR2	Del_7q31.1	1	1
BMPR2	Del_8p22	1	1
BMPR2	Del_10q21.1	1	1
BMPR2	Del_14q11.2	1	1
BMPR2	Del_14q31.1	1	1
BMPR2	Del_15q11.2	1	1
BMPR2	Del_15q15.2	1	1
BMPR2	Del_17p12	1	1
BMPR2	Del_17q24.3	1	1
BMPR2	Del_18p11.31	1	1
BMPR2	Del_18q12.2	1	1
BMPR2	Del_18q21.2	1	1
BMPR2	Del_18q22.1	1	1
BMPR2	Del_19p13.3	1	1
FYN	PRPS1	1	1
FYN	IDH1	1	1
FYN	16p-Amp	1	1
FYN	16q-Amp	1	1
FYN	17q-Amp	1	1
FYN	1q-Amp	1	1
FYN	2p-Amp	1	1
FYN	2q-Amp	1	1
FYN	6p-Amp	1	1
FYN	8p-Amp	1	1
FYN	9p-Amp	1	1
FYN	1p-Del	1	1
FYN	4p-Del	1	1
FYN	4q-Del	1	1
FYN	5q-Del	1	1
FYN	Amp_1q31.1	1	1
FYN	Amp_2q33.1	1	1
FYN	Amp_8p11.23	1	1
FYN	Amp_10q22.3	1	1
FYN	Amp_16p11.2	1	1
FYN	Amp_17q24.1	1	1
FYN	Amp_19p13.2	1	1
FYN	Del_1p33	1	1
FYN	Del_2p12	1	1
FYN	Del_2q22.1	1	1
FYN	Del_3q26.31	1	1
FYN	Del_4q22.1	1	1
FYN	Del_4q35.1	1	1
FYN	Del_5q12.1	1	1
FYN	Del_5q22.2	1	1
FYN	Del_6p25.3	1	1
FYN	Del_6q26	1	1
FYN	Del_8q11.1	1	1
FYN	Del_12p13.1	1	1
FYN	Del_16p13.3	1	1
FYN	Del_16q23.1	1	1
FYN	Del_17q24.3	1	1
FYN	Del_19p13.3	1	1
ALDH1A3	GMNN	1	1
ALDH1A3	13q-Amp	1	1
ALDH1A3	16p-Amp	1	1
ALDH1A3	16q-Amp	1	1
ALDH1A3	17q-Amp	1	1
ALDH1A3	1q-Amp	1	1
ALDH1A3	2p-Amp	1	1
ALDH1A3	2q-Amp	1	1
ALDH1A3	14q-Del	1	1
ALDH1A3	15q-Del	1	1
ALDH1A3	18p-Del	1	1
ALDH1A3	18q-Del	1	1
ALDH1A3	22q-Del	1	1
ALDH1A3	4p-Del	1	1
ALDH1A3	4q-Del	1	1
ALDH1A3	5q-Del	1	1
ALDH1A3	Amp_1q31.1	1	1
ALDH1A3	Amp_2q33.1	1	1
ALDH1A3	Amp_10q22.3	1	1
ALDH1A3	Amp_11p15.5	1	1
ALDH1A3	Amp_13q12.13	1	1
ALDH1A3	Amp_13q12.2	1	1
ALDH1A3	Amp_13q22.1	1	1
ALDH1A3	Amp_16p11.2	1	1
ALDH1A3	Amp_17q12	1	1
ALDH1A3	Amp_17q24.1	1	1
ALDH1A3	Del_2p12	1	1
ALDH1A3	Del_2q22.1	1	1
ALDH1A3	Del_3p26.3	1	1
ALDH1A3	Del_3q26.31	1	1
ALDH1A3	Del_4p16.2	1	1
ALDH1A3	Del_4q35.1	1	1
ALDH1A3	Del_5q12.1	1	1
ALDH1A3	Del_10q21.1	1	1
ALDH1A3	Del_10q23.31	1	1
ALDH1A3	Del_10q25.2	1	1
ALDH1A3	Del_12p13.1	1	1
ALDH1A3	Del_14q11.2	1	1
ALDH1A3	Del_14q31.1	1	1
ALDH1A3	Del_15q11.2	1	1
ALDH1A3	Del_15q15.2	1	1
ALDH1A3	Del_15q21.1	1	1
ALDH1A3	Del_17p12	1	1
ALDH1A3	Del_17q24.3	1	1
ALDH1A3	Del_18p11.31	1	1
ALDH1A3	Del_18q21.2	1	1
ALDH1A3	Del_18q22.1	1	1
ALDH1A3	Del_19p13.3	1	1
LARP4B	GMNN	1	1
LARP4B	13q-Amp	1	1
LARP4B	17q-Amp	1	1
LARP4B	20q-Amp	1	1
LARP4B	2p-Amp	1	1
LARP4B	2q-Amp	1	1
LARP4B	6p-Amp	1	1
LARP4B	9p-Amp	1	1
LARP4B	18p-Del	1	1
LARP4B	18q-Del	1	1
LARP4B	1p-Del	1	1
LARP4B	21q-Del	1	1
LARP4B	4q-Del	1	1
LARP4B	5q-Del	1	1
LARP4B	Amp_2q33.1	1	1
LARP4B	Amp_6p21.1	1	1
LARP4B	Amp_11p15.5	1	1
LARP4B	Amp_13q12.13	1	1
LARP4B	Amp_13q12.2	1	1
LARP4B	Amp_13q22.1	1	1
LARP4B	Amp_17q24.1	1	1
LARP4B	Amp_19p13.2	1	1
LARP4B	Amp_20q11.21	1	1
LARP4B	Amp_20q12	1	1
LARP4B	Amp_20q13.31	1	1
LARP4B	Del_2p12	1	1
LARP4B	Del_2q22.1	1	1
LARP4B	Del_3p26.3	1	1
LARP4B	Del_4q22.1	1	1
LARP4B	Del_4q35.1	1	1
LARP4B	Del_5q12.1	1	1
LARP4B	Del_5q21.2	1	1
LARP4B	Del_8p23.2	1	1
LARP4B	Del_8q11.1	1	1
LARP4B	Del_17p12	1	1
LARP4B	Del_17q24.3	1	1
LARP4B	Del_18p11.31	1	1
LARP4B	Del_18q12.2	1	1
LARP4B	Del_18q21.2	1	1
LARP4B	Del_18q22.1	1	1
LARP4B	Del_19p13.3	1	1
LARP4B	Del_21q11.2	1	1
BCORL1	12p-Amp	1	1
BCORL1	17q-Amp	1	1
BCORL1	20q-Amp	1	1
BCORL1	2q-Amp	1	1
BCORL1	1p-Del	1	1
BCORL1	20p-Del	1	1
BCORL1	5q-Del	1	1
BCORL1	8p-Del	1	1
BCORL1	Amp_2q33.1	1	1
BCORL1	Amp_12p13.32	1	1
BCORL1	Amp_17q12	1	1
BCORL1	Amp_17q24.1	1	1
BCORL1	Amp_19p13.2	1	1
BCORL1	Amp_20q11.21	1	1
BCORL1	Amp_20q12	1	1
BCORL1	Amp_20q13.31	1	1
BCORL1	Del_2p12	1	1
BCORL1	Del_3p26.3	1	1
BCORL1	Del_4p16.2	1	1
BCORL1	Del_6q26	1	1
BCORL1	Del_7q31.1	1	1
BCORL1	Del_8q11.1	1	1
BCORL1	Del_10q23.31	1	1
BCORL1	Del_10q25.2	1	1
BCORL1	Del_12p13.1	1	1
BCORL1	Del_16p13.3	1	1
BCORL1	Del_18q21.2	1	1
BCORL1	Del_18q22.1	1	1
BCORL1	Del_19p13.3	1	1
GPATCH8	PTGDR	1	1
GPATCH8	BIRC3	1	1
GPATCH8	HIST1H1T	1	1
GPATCH8	ZNF486	1	1
GPATCH8	GMNN	1	1
GPATCH8	16p-Amp	1	1
GPATCH8	16q-Amp	1	1
GPATCH8	17q-Amp	1	1
GPATCH8	1q-Amp	1	1
GPATCH8	20q-Amp	1	1
GPATCH8	2p-Amp	1	1
GPATCH8	2q-Amp	1	1
GPATCH8	6p-Amp	1	1
GPATCH8	9p-Amp	1	1
GPATCH8	14q-Del	1	1
GPATCH8	15q-Del	1	1
GPATCH8	17p-Del	1	1
GPATCH8	18p-Del	1	1
GPATCH8	18q-Del	1	1
GPATCH8	1p-Del	1	1
GPATCH8	20p-Del	1	1
GPATCH8	22q-Del	1	1
GPATCH8	5q-Del	1	1
GPATCH8	Amp_1q31.1	1	1
GPATCH8	Amp_2q33.1	1	1
GPATCH8	Amp_6p21.1	1	1
GPATCH8	Amp_10q22.3	1	1
GPATCH8	Amp_11p15.5	1	1
GPATCH8	Amp_13q12.13	1	1
GPATCH8	Amp_13q12.2	1	1
GPATCH8	Amp_13q22.1	1	1
GPATCH8	Amp_16p11.2	1	1
GPATCH8	Amp_17q12	1	1
GPATCH8	Amp_17q24.1	1	1
GPATCH8	Amp_20q11.21	1	1
GPATCH8	Amp_20q12	1	1
GPATCH8	Amp_20q13.31	1	1
GPATCH8	Del_1p36.11	1	1
GPATCH8	Del_1p33	1	1
GPATCH8	Del_1p13.2	1	1
GPATCH8	Del_2p12	1	1
GPATCH8	Del_3p26.3	1	1
GPATCH8	Del_3p14.2	1	1
GPATCH8	Del_4p16.2	1	1
GPATCH8	Del_4q22.1	1	1
GPATCH8	Del_5q12.1	1	1
GPATCH8	Del_5q21.2	1	1
GPATCH8	Del_6p25.3	1	1
GPATCH8	Del_6q26	1	1
GPATCH8	Del_7q31.1	1	1
GPATCH8	Del_8q11.1	1	1
GPATCH8	Del_10q21.1	1	1
GPATCH8	Del_10q23.31	1	1
GPATCH8	Del_10q25.2	1	1
GPATCH8	Del_14q11.2	1	1
GPATCH8	Del_14q31.1	1	1
GPATCH8	Del_15q11.2	1	1
GPATCH8	Del_15q15.2	1	1
GPATCH8	Del_15q21.1	1	1
GPATCH8	Del_15q22.33	1	1
GPATCH8	Del_16p13.3	1	1
GPATCH8	Del_17p12	1	1
GPATCH8	Del_17q24.3	1	1
GPATCH8	Del_18p11.31	1	1
GPATCH8	Del_18q12.2	1	1
GPATCH8	Del_18q21.2	1	1
GPATCH8	Del_18q22.1	1	1
GPATCH8	Del_19p13.3	1	1
GPATCH8	Del_22q13.32	1	1
MAP4K3	PRPS1	1	1
MAP4K3	PTGDR	1	1
MAP4K3	12p-Amp	1	1
MAP4K3	16p-Amp	1	1
MAP4K3	16q-Amp	1	1
MAP4K3	17q-Amp	1	1
MAP4K3	1q-Amp	1	1
MAP4K3	20q-Amp	1	1
MAP4K3	2p-Amp	1	1
MAP4K3	2q-Amp	1	1
MAP4K3	6p-Amp	1	1
MAP4K3	9p-Amp	1	1
MAP4K3	14q-Del	1	1
MAP4K3	15q-Del	1	1
MAP4K3	1p-Del	1	1
MAP4K3	20p-Del	1	1
MAP4K3	4q-Del	1	1
MAP4K3	5q-Del	1	1
MAP4K3	Amp_1q31.1	1	1
MAP4K3	Amp_5q22.3	1	1
MAP4K3	Amp_6p21.1	1	1
MAP4K3	Amp_10q22.3	1	1
MAP4K3	Amp_12p13.32	1	1
MAP4K3	Amp_16p11.2	1	1
MAP4K3	Amp_17q12	1	1
MAP4K3	Amp_17q24.1	1	1
MAP4K3	Amp_19p13.2	1	1
MAP4K3	Amp_20p11.21	1	1
MAP4K3	Amp_20q11.21	1	1
MAP4K3	Amp_20q12	1	1
MAP4K3	Amp_20q13.31	1	1
MAP4K3	Del_1p33	1	1
MAP4K3	Del_1p13.2	1	1
MAP4K3	Del_2p12	1	1
MAP4K3	Del_3p26.3	1	1
MAP4K3	Del_4q35.1	1	1
MAP4K3	Del_5q12.1	1	1
MAP4K3	Del_6q26	1	1
MAP4K3	Del_7q31.1	1	1
MAP4K3	Del_8q11.1	1	1
MAP4K3	Del_10q23.31	1	1
MAP4K3	Del_10q25.2	1	1
MAP4K3	Del_15q11.2	1	1
MAP4K3	Del_15q15.2	1	1
MAP4K3	Del_15q21.1	1	1
MAP4K3	Del_15q22.33	1	1
MAP4K3	Del_16p13.3	1	1
SETD2	PRPS1	1	1
SETD2	17q-Amp	1	1
SETD2	20p-Amp	1	1
SETD2	20q-Amp	1	1
SETD2	2p-Amp	1	1
SETD2	2q-Amp	1	1
SETD2	18q-Del	1	1
SETD2	Amp_10q22.3	1	1
SETD2	Amp_20p11.21	1	1
SETD2	Amp_20q11.21	1	1
SETD2	Amp_20q12	1	1
SETD2	Amp_20q13.31	1	1
SETD2	Del_2p12	1	1
SETD2	Del_2q22.1	1	1
SETD2	Del_3p26.3	1	1
SETD2	Del_12p13.1	1	1
SETD2	Del_16p13.3	1	1
SETD2	Del_18q12.2	1	1
SETD2	Del_18q21.2	1	1
SETD2	Del_18q22.1	1	1
SETD2	Del_19p13.3	1	1
SLC12A6	HIST1H1T	1	1
SLC12A6	16p-Amp	1	1
SLC12A6	16q-Amp	1	1
SLC12A6	17q-Amp	1	1
SLC12A6	20q-Amp	1	1
SLC12A6	2p-Amp	1	1
SLC12A6	2q-Amp	1	1
SLC12A6	6p-Amp	1	1
SLC12A6	14q-Del	1	1
SLC12A6	15q-Del	1	1
SLC12A6	1p-Del	1	1
SLC12A6	20p-Del	1	1
SLC12A6	5q-Del	1	1
SLC12A6	Amp_2q33.1	1	1
SLC12A6	Amp_10q22.3	1	1
SLC12A6	Amp_17q12	1	1
SLC12A6	Amp_17q24.1	1	1
SLC12A6	Amp_20q11.21	1	1
SLC12A6	Amp_20q12	1	1
SLC12A6	Amp_20q13.31	1	1
SLC12A6	Del_1p13.2	1	1
SLC12A6	Del_2p12	1	1
SLC12A6	Del_5q12.1	1	1
SLC12A6	Del_7q31.1	1	1
SLC12A6	Del_8p22	1	1
SLC12A6	Del_8q11.1	1	1
SLC12A6	Del_15q11.2	1	1
SLC12A6	Del_15q15.2	1	1
SLC12A6	Del_15q21.1	1	1
SLC12A6	Del_15q22.33	1	1
SLC12A6	Del_16p13.3	1	1
SLC12A6	Del_18q21.2	1	1
SLC12A6	Del_18q22.1	1	1
CDK12	PTGDR	1	1
CDK12	IDH1	1	1
CDK12	17q-Amp	1	1
CDK12	20q-Amp	1	1
CDK12	2p-Amp	1	1
CDK12	2q-Amp	1	1
CDK12	6p-Amp	1	1
CDK12	1p-Del	1	1
CDK12	5q-Del	1	1
CDK12	Amp_2q33.1	1	1
CDK12	Amp_5q22.3	1	1
CDK12	Amp_6p21.1	1	1
CDK12	Amp_10q22.3	1	1
CDK12	Amp_11p15.5	1	1
CDK12	Amp_17q12	1	1
CDK12	Amp_17q24.1	1	1
CDK12	Amp_19p13.2	1	1
CDK12	Del_1p36.11	1	1
CDK12	Del_1p33	1	1
CDK12	Del_1p13.2	1	1
CDK12	Del_2p12	1	1
CDK12	Del_2q22.1	1	1
CDK12	Del_5q12.1	1	1
CDK12	Del_5q21.2	1	1
CDK12	Del_6q26	1	1
CDK12	Del_10q21.1	1	1
CDK12	Del_10q23.31	1	1
CDK12	Del_17q24.3	1	1
CDK12	Del_19p13.3	1	1
NEXN	PRPS1	1	1
NEXN	IDH1	1	1
NEXN	16p-Amp	1	1
NEXN	16q-Amp	1	1
NEXN	17q-Amp	1	1
NEXN	1q-Amp	1	1
NEXN	2p-Amp	1	1
NEXN	2q-Amp	1	1
NEXN	8p-Amp	1	1
NEXN	15q-Del	1	1
NEXN	1p-Del	1	1
NEXN	20p-Del	1	1
NEXN	4q-Del	1	1
NEXN	Amp_2q33.1	1	1
NEXN	Amp_5q22.3	1	1
NEXN	Amp_11p15.5	1	1
NEXN	Amp_19p13.2	1	1
NEXN	Del_1p33	1	1
NEXN	Del_1p13.2	1	1
NEXN	Del_2p12	1	1
NEXN	Del_2q22.1	1	1
NEXN	Del_3p26.3	1	1
NEXN	Del_3q26.31	1	1
NEXN	Del_4q35.1	1	1
NEXN	Del_6p25.3	1	1
NEXN	Del_6q26	1	1
NEXN	Del_7q31.1	1	1
NEXN	Del_8q11.1	1	1
NEXN	Del_10q21.1	1	1
NEXN	Del_10q25.2	1	1
NEXN	Del_16p13.3	1	1
NEXN	Del_17q24.3	1	1
GMPS	16p-Amp	1	1
GMPS	16q-Amp	1	1
GMPS	17q-Amp	1	1
GMPS	1q-Amp	1	1
GMPS	2p-Amp	1	1
GMPS	2q-Amp	1	1
GMPS	6p-Amp	1	1
GMPS	9p-Amp	1	1
GMPS	14q-Del	1	1
GMPS	15q-Del	1	1
GMPS	17p-Del	1	1
GMPS	18p-Del	1	1
GMPS	18q-Del	1	1
GMPS	1p-Del	1	1
GMPS	20p-Del	1	1
GMPS	21q-Del	1	1
GMPS	22q-Del	1	1
GMPS	4p-Del	1	1
GMPS	4q-Del	1	1
GMPS	5q-Del	1	1
GMPS	Amp_1q31.1	1	1
GMPS	Amp_2q33.1	1	1
GMPS	Amp_5q22.3	1	1
GMPS	Amp_6p21.1	1	1
GMPS	Amp_10q22.3	1	1
GMPS	Amp_11p15.5	1	1
GMPS	Amp_16p11.2	1	1
GMPS	Amp_17q24.1	1	1
GMPS	Amp_19p13.2	1	1
GMPS	Del_1p36.11	1	1
GMPS	Del_1p13.2	1	1
GMPS	Del_2p12	1	1
GMPS	Del_2q22.1	1	1
GMPS	Del_3p26.3	1	1
GMPS	Del_3q26.31	1	1
GMPS	Del_4p16.2	1	1
GMPS	Del_4q22.1	1	1
GMPS	Del_4q35.1	1	1
GMPS	Del_5q12.1	1	1
GMPS	Del_5q21.2	1	1
GMPS	Del_5q22.2	1	1
GMPS	Del_6p25.3	1	1
GMPS	Del_6q26	1	1
GMPS	Del_8q11.1	1	1
GMPS	Del_10q21.1	1	1
GMPS	Del_10q23.31	1	1
GMPS	Del_10q25.2	1	1
GMPS	Del_12p13.1	1	1
GMPS	Del_14q11.2	1	1
GMPS	Del_14q31.1	1	1
GMPS	Del_15q11.2	1	1
GMPS	Del_15q21.1	1	1
GMPS	Del_15q22.33	1	1
GMPS	Del_16q23.1	1	1
GMPS	Del_17q24.3	1	1
GMPS	Del_18p11.31	1	1
GMPS	Del_18q21.2	1	1
GMPS	Del_18q22.1	1	1
GMPS	Del_19p13.3	1	1
GMPS	Del_21q11.2	1	1
GMPS	Del_22q13.32	1	1
PRPS1	BIRC3	1	1
PRPS1	HIST1H1T	1	1
PRPS1	ZNF486	1	1
PRPS1	GMNN	1	1
PRPS1	16p-Amp	1	1
PRPS1	16q-Amp	1	1
PRPS1	17q-Amp	1	1
PRPS1	1q-Amp	1	1
PRPS1	2p-Amp	1	1
PRPS1	2q-Amp	1	1
PRPS1	6p-Amp	1	1
PRPS1	9p-Amp	1	1
PRPS1	14q-Del	1	1
PRPS1	17p-Del	1	1
PRPS1	1p-Del	1	1
PRPS1	20p-Del	1	1
PRPS1	22q-Del	1	1
PRPS1	4p-Del	1	1
PRPS1	4q-Del	1	1
PRPS1	Amp_1q31.1	1	1
PRPS1	Amp_2q33.1	1	1
PRPS1	Amp_6p21.1	1	1
PRPS1	Amp_10q22.3	1	1
PRPS1	Amp_11p15.5	1	1
PRPS1	Amp_16p11.2	1	1
PRPS1	Amp_17q24.1	1	1
PRPS1	Amp_19p13.2	1	1
PRPS1	Del_1p36.11	1	1
PRPS1	Del_1p33	1	1
PRPS1	Del_2p12	1	1
PRPS1	Del_2q22.1	1	1
PRPS1	Del_3p26.3	1	1
PRPS1	Del_3p14.2	1	1
PRPS1	Del_3q26.31	1	1
PRPS1	Del_4p16.2	1	1
PRPS1	Del_4q22.1	1	1
PRPS1	Del_6q26	1	1
PRPS1	Del_7q31.1	1	1
PRPS1	Del_8q11.1	1	1
PRPS1	Del_10q21.1	1	1
PRPS1	Del_10q23.31	1	1
PRPS1	Del_10q25.2	1	1
PRPS1	Del_12p13.1	1	1
PRPS1	Del_14q11.2	1	1
PRPS1	Del_17p12	1	1
PRPS1	Del_17q24.3	1	1
PRPS1	Del_19p13.3	1	1
PRPS1	Del_22q13.32	1	1
PTGDR	IDH1	1	1
PTGDR	12p-Amp	1	1
PTGDR	16p-Amp	1	1
PTGDR	17q-Amp	1	1
PTGDR	1q-Amp	1	1
PTGDR	2p-Amp	1	1
PTGDR	2q-Amp	1	1
PTGDR	6p-Amp	1	1
PTGDR	9p-Amp	1	1
PTGDR	14q-Del	1	1
PTGDR	20p-Del	1	1
PTGDR	21q-Del	1	1
PTGDR	4p-Del	1	1
PTGDR	4q-Del	1	1
PTGDR	5q-Del	1	1
PTGDR	Amp_1q31.1	1	1
PTGDR	Amp_2q33.1	1	1
PTGDR	Amp_5q22.3	1	1
PTGDR	Amp_6p21.1	1	1
PTGDR	Amp_10q22.3	1	1
PTGDR	Amp_11p15.5	1	1
PTGDR	Amp_12p13.32	1	1
PTGDR	Amp_16p11.2	1	1
PTGDR	Amp_17q12	1	1
PTGDR	Amp_17q24.1	1	1
PTGDR	Amp_19p13.2	1	1
PTGDR	Del_2p12	1	1
PTGDR	Del_2q22.1	1	1
PTGDR	Del_3p26.3	1	1
PTGDR	Del_3p14.2	1	1
PTGDR	Del_3q26.31	1	1
PTGDR	Del_5q12.1	1	1
PTGDR	Del_6p25.3	1	1
PTGDR	Del_6q26	1	1
PTGDR	Del_7q31.1	1	1
PTGDR	Del_8q11.1	1	1
PTGDR	Del_10q23.31	1	1
PTGDR	Del_10q25.2	1	1
PTGDR	Del_12p13.1	1	1
PTGDR	Del_14q11.2	1	1
PTGDR	Del_14q31.1	1	1
PTGDR	Del_15q15.2	1	1
PTGDR	Del_15q21.1	1	1
PTGDR	Del_17q24.3	1	1
PTGDR	Del_19p13.3	1	1
PTGDR	Del_21q11.2	1	1
BIRC3	IDH1	1	1
BIRC3	17q-Amp	1	1
BIRC3	1q-Amp	1	1
BIRC3	2p-Amp	1	1
BIRC3	2q-Amp	1	1
BIRC3	6p-Amp	1	1
BIRC3	9p-Amp	1	1
BIRC3	1p-Del	1	1
BIRC3	20p-Del	1	1
BIRC3	4q-Del	1	1
BIRC3	5q-Del	1	1
BIRC3	Amp_5q22.3	1	1
BIRC3	Amp_6p21.1	1	1
BIRC3	Amp_10q22.3	1	1
BIRC3	Amp_11p15.5	1	1
BIRC3	Amp_17q12	1	1
BIRC3	Amp_19p13.2	1	1
BIRC3	Del_1p36.11	1	1
BIRC3	Del_1p33	1	1
BIRC3	Del_2p12	1	1
BIRC3	Del_2q22.1	1	1
BIRC3	Del_6q26	1	1
BIRC3	Del_7q31.1	1	1
BIRC3	Del_8q11.1	1	1
BIRC3	Del_10q21.1	1	1
BIRC3	Del_16p13.3	1	1
BIRC3	Del_19p13.3	1	1
ATM	20p-Amp	1	1
ATM	20q-Amp	1	1
ATM	Amp_20p11.21	1	1
ATM	Amp_20q11.21	1	1
ATM	Amp_20q12	1	1
ATM	Amp_20q13.31	1	1
ATM	Del_17p12	1	1
ATM	Del_18q12.2	1	1
HIST1H1T	KDM6A	1	1
HIST1H1T	12p-Amp	1	1
HIST1H1T	16p-Amp	1	1
HIST1H1T	16q-Amp	1	1
HIST1H1T	17q-Amp	1	1
HIST1H1T	2p-Amp	1	1
HIST1H1T	2q-Amp	1	1
HIST1H1T	6p-Amp	1	1
HIST1H1T	9p-Amp	1	1
HIST1H1T	5q-Del	1	1
HIST1H1T	Amp_2q33.1	1	1
HIST1H1T	Amp_6p21.1	1	1
HIST1H1T	Amp_10q22.3	1	1
HIST1H1T	Amp_12p13.32	1	1
HIST1H1T	Amp_16p11.2	1	1
HIST1H1T	Amp_17q12	1	1
HIST1H1T	Del_2p12	1	1
HIST1H1T	Del_2q22.1	1	1
HIST1H1T	Del_3p26.3	1	1
HIST1H1T	Del_3q26.31	1	1
HIST1H1T	Del_4p16.2	1	1
HIST1H1T	Del_5q12.1	1	1
HIST1H1T	Del_6q26	1	1
HIST1H1T	Del_7q31.1	1	1
HIST1H1T	Del_10q21.1	1	1
HIST1H1T	Del_10q23.31	1	1
HIST1H1T	Del_10q25.2	1	1
HIST1H1T	Del_12p13.1	1	1
HIST1H1T	Del_17q24.3	1	1
HIST1H1T	Del_19p13.3	1	1
IDH1	GMNN	1	1
IDH1	16p-Amp	1	1
IDH1	16q-Amp	1	1
IDH1	1q-Amp	1	1
IDH1	2p-Amp	1	1
IDH1	2q-Amp	1	1
IDH1	6p-Amp	1	1
IDH1	14q-Del	1	1
IDH1	1p-Del	1	1
IDH1	22q-Del	1	1
IDH1	5q-Del	1	1
IDH1	Amp_1q31.1	1	1
IDH1	Amp_2q33.1	1	1
IDH1	Amp_6p21.1	1	1
IDH1	Amp_10q22.3	1	1
IDH1	Amp_16p11.2	1	1
IDH1	Amp_19p13.2	1	1
IDH1	Del_2p12	1	1
IDH1	Del_2q22.1	1	1
IDH1	Del_3q26.31	1	1
IDH1	Del_5q12.1	1	1
IDH1	Del_6p25.3	1	1
IDH1	Del_6q26	1	1
IDH1	Del_7q31.1	1	1
IDH1	Del_10q21.1	1	1
IDH1	Del_10q23.31	1	1
IDH1	Del_12p13.1	1	1
IDH1	Del_14q31.1	1	1
IDH1	Del_16p13.3	1	1
IDH1	Del_17q24.3	1	1
IDH1	Del_19p13.3	1	1
IDH1	Del_22q13.32	1	1
ZNF486	GMNN	1	1
ZNF486	KDM6A	1	1
ZNF486	17q-Amp	1	1
ZNF486	2p-Amp	1	1
ZNF486	2q-Amp	1	1
ZNF486	6p-Amp	1	1
ZNF486	7q-Amp	1	1
ZNF486	15q-Del	1	1
ZNF486	1p-Del	1	1
ZNF486	20p-Del	1	1
ZNF486	21q-Del	1	1
ZNF486	22q-Del	1	1
ZNF486	4p-Del	1	1
ZNF486	4q-Del	1	1
ZNF486	Amp_5q22.3	1	1
ZNF486	Amp_6p21.1	1	1
ZNF486	Amp_11p15.5	1	1
ZNF486	Amp_17q12	1	1
ZNF486	Amp_17q24.1	1	1
ZNF486	Amp_19p13.2	1	1
ZNF486	Del_1p36.11	1	1
ZNF486	Del_1p33	1	1
ZNF486	Del_1p13.2	1	1
ZNF486	Del_2p12	1	1
ZNF486	Del_2q22.1	1	1
ZNF486	Del_3p26.3	1	1
ZNF486	Del_3p14.2	1	1
ZNF486	Del_4q35.1	1	1
ZNF486	Del_6q26	1	1
ZNF486	Del_8q11.1	1	1
ZNF486	Del_10q21.1	1	1
ZNF486	Del_10q25.2	1	1
ZNF486	Del_12p13.1	1	1
ZNF486	Del_15q15.2	1	1
ZNF486	Del_15q21.1	1	1
ZNF486	Del_15q22.33	1	1
ZNF486	Del_16p13.3	1	1
ZNF486	Del_17q24.3	1	1
ZNF486	Del_21q11.2	1	1
ZNF486	Del_22q13.32	1	1
CREBBP	13q-Amp	1	1
CREBBP	17q-Amp	1	1
CREBBP	20q-Amp	1	1
CREBBP	2q-Amp	1	1
CREBBP	17p-Del	1	1
CREBBP	18p-Del	1	1
CREBBP	18q-Del	1	1
CREBBP	1p-Del	1	1
CREBBP	5q-Del	1	1
CREBBP	Amp_13q12.13	1	1
CREBBP	Amp_13q12.2	1	1
CREBBP	Amp_13q22.1	1	1
CREBBP	Amp_20q11.21	1	1
CREBBP	Amp_20q12	1	1
CREBBP	Amp_20q13.31	1	1
CREBBP	Del_2p12	1	1
CREBBP	Del_8p23.2	1	1
CREBBP	Del_8p22	1	1
CREBBP	Del_17p12	1	1
CREBBP	Del_18p11.31	1	1
CREBBP	Del_18q12.2	1	1
CREBBP	Del_18q21.2	1	1
CREBBP	Del_18q22.1	1	1
GMNN	12p-Amp	1	1
GMNN	16p-Amp	1	1
GMNN	17q-Amp	1	1
GMNN	1q-Amp	1	1
GMNN	2p-Amp	1	1
GMNN	2q-Amp	1	1
GMNN	6p-Amp	1	1
GMNN	1p-Del	1	1
GMNN	20p-Del	1	1
GMNN	22q-Del	1	1
GMNN	4p-Del	1	1
GMNN	4q-Del	1	1
GMNN	5q-Del	1	1
GMNN	Amp_1q31.1	1	1
GMNN	Amp_2q33.1	1	1
GMNN	Amp_5q22.3	1	1
GMNN	Amp_6p21.1	1	1
GMNN	Amp_10q22.3	1	1
GMNN	Amp_11p15.5	1	1
GMNN	Amp_12p13.32	1	1
GMNN	Amp_16p11.2	1	1
GMNN	Amp_17q12	1	1
GMNN	Amp_19p13.2	1	1
GMNN	Del_1p36.11	1	1
GMNN	Del_1p33	1	1
GMNN	Del_1p13.2	1	1
GMNN	Del_2p12	1	1
GMNN	Del_2q22.1	1	1
GMNN	Del_3p26.3	1	1
GMNN	Del_3p14.2	1	1
GMNN	Del_3q26.31	1	1
GMNN	Del_4p16.2	1	1
GMNN	Del_4q22.1	1	1
GMNN	Del_4q35.1	1	1
GMNN	Del_5q12.1	1	1
GMNN	Del_5q21.2	1	1
GMNN	Del_5q22.2	1	1
GMNN	Del_6p25.3	1	1
GMNN	Del_6q26	1	1
GMNN	Del_7q31.1	1	1
GMNN	Del_8q11.1	1	1
GMNN	Del_10q21.1	1	1
GMNN	Del_10q23.31	1	1
GMNN	Del_10q25.2	1	1
GMNN	Del_16p13.3	1	1
GMNN	Del_16q23.1	1	1
GMNN	Del_17q24.3	1	1
GMNN	Del_19p13.3	1	1
GMNN	Del_22q13.32	1	1
CTNNB1	Del_2p12	1	1
CTNNB1	Del_7q31.1	1	1
KDM6A	13q-Amp	1	1
KDM6A	16p-Amp	1	1
KDM6A	16q-Amp	1	1
KDM6A	17q-Amp	1	1
KDM6A	2p-Amp	1	1
KDM6A	2q-Amp	1	1
KDM6A	6p-Amp	1	1
KDM6A	9p-Amp	1	1
KDM6A	15q-Del	1	1
KDM6A	18q-Del	1	1
KDM6A	1p-Del	1	1
KDM6A	21q-Del	1	1
KDM6A	22q-Del	1	1
KDM6A	4p-Del	1	1
KDM6A	4q-Del	1	1
KDM6A	5q-Del	1	1
KDM6A	Amp_5q22.3	1	1
KDM6A	Amp_6p21.1	1	1
KDM6A	Amp_10q22.3	1	1
KDM6A	Amp_11p15.5	1	1
KDM6A	Amp_17q12	1	1
KDM6A	Amp_19p13.2	1	1
KDM6A	Del_1p13.2	1	1
KDM6A	Del_2p12	1	1
KDM6A	Del_2q22.1	1	1
KDM6A	Del_3p26.3	1	1
KDM6A	Del_3q26.31	1	1
KDM6A	Del_4p16.2	1	1
KDM6A	Del_6q26	1	1
KDM6A	Del_7q31.1	1	1
KDM6A	Del_8q11.1	1	1
KDM6A	Del_10q23.31	1	1
KDM6A	Del_15q22.33	1	1
KDM6A	Del_22q13.32	1	1
12p-Amp	1p-Del	1	1
12p-Amp	22q-Del	1	1
12p-Amp	Del_1p33	1	1
12p-Amp	Del_8q11.1	1	1
16p-Amp	2p-Amp	1	1
16p-Amp	2q-Amp	1	1
16p-Amp	1p-Del	1	1
16p-Amp	Amp_2q33.1	1	1
16p-Amp	Amp_11p15.5	1	1
16p-Amp	Amp_19p13.2	1	1
16p-Amp	Del_1p33	1	1
16p-Amp	Del_2p12	1	1
16p-Amp	Del_3p14.2	1	1
16p-Amp	Del_6p25.3	1	1
16p-Amp	Del_7q31.1	1	1
16p-Amp	Del_8q11.1	1	1
16p-Amp	Del_10q21.1	1	1
16p-Amp	Del_16q23.1	1	1
16q-Amp	2p-Amp	1	1
16q-Amp	2q-Amp	1	1
16q-Amp	1p-Del	1	1
16q-Amp	20p-Del	1	1
16q-Amp	Amp_2q33.1	1	1
16q-Amp	Amp_10q22.3	1	1
16q-Amp	Amp_11p15.5	1	1
16q-Amp	Amp_19p13.2	1	1
16q-Amp	Del_1p36.11	1	1
16q-Amp	Del_1p33	1	1
16q-Amp	Del_1p13.2	1	1
16q-Amp	Del_2p12	1	1
16q-Amp	Del_3p14.2	1	1
16q-Amp	Del_6p25.3	1	1
16q-Amp	Del_6q26	1	1
16q-Amp	Del_7q31.1	1	1
16q-Amp	Del_8q11.1	1	1
16q-Amp	Del_10q21.1	1	1
16q-Amp	Del_10q25.2	1	1
16q-Amp	Del_12p13.1	1	1
16q-Amp	Del_16q23.1	1	1
17q-Amp	1p-Del	1	1
17q-Amp	4p-Del	1	1
17q-Amp	5q-Del	1	1
17q-Amp	Del_1p33	1	1
17q-Amp	Del_1p13.2	1	1
17q-Amp	Del_4p16.2	1	1
17q-Amp	Del_10q25.2	1	1
17q-Amp	Del_16p13.3	1	1
17q-Amp	Del_16q23.1	1	1
1q-Amp	1p-Del	1	1
1q-Amp	Amp_10q22.3	1	1
1q-Amp	Del_2q22.1	1	1
20p-Amp	20p-Del	1	1
2p-Amp	15q-Del	1	1
2p-Amp	17p-Del	1	1
2p-Amp	1p-Del	1	1
2p-Amp	21q-Del	1	1
2p-Amp	22q-Del	1	1
2p-Amp	4p-Del	1	1
2p-Amp	4q-Del	1	1
2p-Amp	5q-Del	1	1
2p-Amp	Amp_16p11.2	1	1
2p-Amp	Del_1p33	1	1
2p-Amp	Del_1p13.2	1	1
2p-Amp	Del_3p26.3	1	1
2p-Amp	Del_4p16.2	1	1
2p-Amp	Del_4q22.1	1	1
2p-Amp	Del_5q21.2	1	1
2p-Amp	Del_5q22.2	1	1
2p-Amp	Del_6p25.3	1	1
2p-Amp	Del_6q26	1	1
2p-Amp	Del_7q31.1	1	1
2p-Amp	Del_8q11.1	1	1
2p-Amp	Del_10q21.1	1	1
2p-Amp	Del_10q23.31	1	1
2p-Amp	Del_10q25.2	1	1
2p-Amp	Del_15q11.2	1	1
2p-Amp	Del_15q15.2	1	1
2p-Amp	Del_15q21.1	1	1
2p-Amp	Del_15q22.33	1	1
2p-Amp	Del_16p13.3	1	1
2p-Amp	Del_16q23.1	1	1
2p-Amp	Del_17q24.3	1	1
2p-Amp	Del_19p13.3	1	1
2p-Amp	Del_21q11.2	1	1
2p-Amp	Del_22q13.32	1	1
2q-Amp	15q-Del	1	1
2q-Amp	17p-Del	1	1
2q-Amp	1p-Del	1	1
2q-Amp	21q-Del	1	1
2q-Amp	22q-Del	1	1
2q-Amp	4p-Del	1	1
2q-Amp	4q-Del	1	1
2q-Amp	5q-Del	1	1
2q-Amp	Amp_10q22.3	1	1
2q-Amp	Amp_16p11.2	1	1
2q-Amp	Del_1p36.11	1	1
2q-Amp	Del_1p33	1	1
2q-Amp	Del_1p13.2	1	1
2q-Amp	Del_3p26.3	1	1
2q-Amp	Del_3p14.2	1	1
2q-Amp	Del_4p16.2	1	1
2q-Amp	Del_4q22.1	1	1
2q-Amp	Del_5q21.2	1	1
2q-Amp	Del_5q22.2	1	1
2q-Amp	Del_6p25.3	1	1
2q-Amp	Del_6q26	1	1
2q-Amp	Del_7q31.1	1	1
2q-Amp	Del_8q11.1	1	1
2q-Amp	Del_10q21.1	1	1
2q-Amp	Del_10q23.31	1	1
2q-Amp	Del_15q11.2	1	1
2q-Amp	Del_15q15.2	1	1
2q-Amp	Del_15q21.1	1	1
2q-Amp	Del_15q22.33	1	1
2q-Amp	Del_16p13.3	1	1
2q-Amp	Del_16q23.1	1	1
2q-Amp	Del_17q24.3	1	1
2q-Amp	Del_19p13.3	1	1
2q-Amp	Del_21q11.2	1	1
2q-Amp	Del_22q13.32	1	1
6p-Amp	14q-Del	1	1
6p-Amp	15q-Del	1	1
6p-Amp	1p-Del	1	1
6p-Amp	20p-Del	1	1
6p-Amp	21q-Del	1	1
6p-Amp	5q-Del	1	1
6p-Amp	Amp_5q22.3	1	1
6p-Amp	Amp_19p13.2	1	1
6p-Amp	Del_1p33	1	1
6p-Amp	Del_1p13.2	1	1
6p-Amp	Del_2p12	1	1
6p-Amp	Del_2q22.1	1	1
6p-Amp	Del_3p26.3	1	1
6p-Amp	Del_5q12.1	1	1
6p-Amp	Del_6p25.3	1	1
6p-Amp	Del_6q26	1	1
6p-Amp	Del_7q31.1	1	1
6p-Amp	Del_8q11.1	1	1
6p-Amp	Del_10q21.1	1	1
6p-Amp	Del_10q23.31	1	1
6p-Amp	Del_10q25.2	1	1
6p-Amp	Del_12p13.1	1	1
6p-Amp	Del_14q11.2	1	1
6p-Amp	Del_14q31.1	1	1
6p-Amp	Del_15q11.2	1	1
6p-Amp	Del_15q15.2	1	1
6p-Amp	Del_15q21.1	1	1
6p-Amp	Del_15q22.33	1	1
6p-Amp	Del_16p13.3	1	1
6p-Amp	Del_16q23.1	1	1
8p-Amp	1p-Del	1	1
8p-Amp	8p-Del	1	1
8p-Amp	Del_1p33	1	1
8p-Amp	Del_1p13.2	1	1
8p-Amp	Del_2p12	1	1
8p-Amp	Del_7q31.1	1	1
9p-Amp	1p-Del	1	1
9p-Amp	20p-Del	1	1
9p-Amp	Del_1p33	1	1
9p-Amp	Del_2p12	1	1
9p-Amp	Del_3p26.3	1	1
9p-Amp	Del_7q31.1	1	1
14q-Del	Amp_12p13.32	1	1
15q-Del	Amp_12p13.32	1	1
1p-Del	Amp_2q33.1	1	1
1p-Del	Amp_5q22.3	1	1
1p-Del	Amp_10q22.3	1	1
1p-Del	Amp_12p13.32	1	1
1p-Del	Amp_16p11.2	1	1
1p-Del	Del_2p12	1	1
1p-Del	Del_7q31.1	1	1
1p-Del	Del_19p13.3	1	1
20p-Del	Del_2q22.1	1	1
22q-Del	Del_2p12	1	1
5q-Del	Amp_2q33.1	1	1
5q-Del	Amp_10q22.3	1	1
5q-Del	Amp_11p15.5	1	1
5q-Del	Del_2p12	1	1
5q-Del	Del_7q31.1	1	1
5q-Del	Del_8q11.1	1	1
Amp_2q33.1	Amp_10q22.3	1	1
Amp_2q33.1	Del_1p13.2	1	1
Amp_2q33.1	Del_5q21.2	1	1
Amp_2q33.1	Del_5q22.2	1	1
Amp_2q33.1	Del_6p25.3	1	1
Amp_2q33.1	Del_8q11.1	1	1
Amp_2q33.1	Del_21q11.2	1	1
Amp_5q22.3	Amp_10q22.3	1	1
Amp_5q22.3	Del_6p25.3	1	1
Amp_5q22.3	Del_6q26	1	1
Amp_5q22.3	Del_7q31.1	1	1
Amp_5q22.3	Del_8q11.1	1	1
Amp_5q22.3	Del_10q25.2	1	1
Amp_5q22.3	Del_12p13.1	1	1
Amp_5q22.3	Del_17q24.3	1	1
Amp_8p11.23	Del_7q31.1	1	1
Amp_8p11.21	Del_7q31.1	1	1
Amp_10q22.3	Amp_11p15.5	1	1
Amp_10q22.3	Amp_17q12	1	1
Amp_10q22.3	Del_1p33	1	1
Amp_10q22.3	Del_2p12	1	1
Amp_11p15.5	Amp_16p11.2	1	1
Amp_11p15.5	Del_5q12.1	1	1
Amp_11p15.5	Del_7q31.1	1	1
Amp_12p13.32	Del_1p33	1	1
Amp_12p13.32	Del_8q11.1	1	1
Amp_16p11.2	Del_6p25.3	1	1
Amp_16p11.2	Del_7q31.1	1	1
Amp_17q12	Del_16p13.3	1	1
Amp_17q12	Del_16q23.1	1	1
Amp_17q24.1	Del_10q25.2	1	1
Amp_17q24.1	Del_16p13.3	1	1
Amp_19p13.2	Del_6q26	1	1
Amp_19p13.2	Del_7q31.1	1	1
Amp_19p13.2	Del_16q23.1	1	1
Amp_20p11.21	Del_6q26	1	1
Del_1p33	Del_2p12	1	1
Del_1p33	Del_7q31.1	1	1
Del_1p33	Del_19p13.3	1	1
Del_1p13.2	Del_2p12	1	1
Del_1p13.2	Del_7q31.1	1	1
Del_2p12	Del_3p26.3	1	1
Del_2p12	Del_3p14.2	1	1
Del_2p12	Del_6p25.3	1	1
Del_2p12	Del_12p13.1	1	1
Del_2q22.1	Del_3p26.3	1	1
Del_2q22.1	Del_7q31.1	1	1
Del_2q22.1	Del_12p13.1	1	1
Del_3p26.3	Del_7q31.1	1	1
Del_5q21.2	Del_7q31.1	1	1
Del_5q22.2	Del_7q31.1	1	1
Del_7q31.1	Del_8q11.1	1	1
Del_7q31.1	Del_12p13.1	1	1
Del_7q31.1	Del_19p13.3	1	1
Del_12p13.1	Del_16q23.1	1	1
15q-Del	22q-Del	1.01e-06	1
PRKDC	RB1	1.01e-08	1
17p-Del	Del_4q22.1	1.01e-08	1
17p-Del	Del_8p23.2	1.01e-10	1
14q-Del	17p-Del	1.01e-13	1
Del_1p13.2	Del_4p16.2	1.02e-06	1
Amp_20q12	Del_14q11.2	1.02e-09	1
18q-Del	Del_18q22.1	1.02e-110	1
Del_8p22	Del_18q12.2	1.02e-18	1
20p-Amp	Del_18p11.31	1.03e-07	1
CDH1	PTEN	1.03e-09	1
7q-Amp	Amp_13q12.2	1.03e-09	1
18q-Del	Amp_13q12.2	1.03e-11	1
Del_14q11.2	Del_18q21.2	1.03e-21	1
CDH1	SMAD4	1.04e-05	1
20q-Amp	17p-Del	1.04e-06	1
Del_4q22.1	Del_15q11.2	1.04e-07	1
PTCH1	RB1	1.04e-10	1
8p-Amp	8q-Amp	1.04e-34	1
18q-Del	4p-Del	1.05e-07	1
Del_15q11.2	Del_18p11.31	1.05e-13	1
ARID1A	BMPR2	1.06e-07	1
Del_15q22.33	Del_18q22.1	1.06e-24	1
Amp_13q12.2	Amp_16p11.2	1.07e-05	1
Del_8p23.2	Del_19p13.3	1.07e-05	1
Amp_20q11.21	Del_15q22.33	1.07e-08	1
PRKDC	ATM	1.07e-09	1
20q-Amp	Del_15q11.2	1.08e-05	1
8q-Amp	Amp_20p11.21	1.08e-05	1
TP53	Del_8p22	1.08e-08	1
Del_8p22	Del_18p11.31	1.08e-10	1
Amp_8p11.21	Amp_20q11.21	1.09e-05	1
Del_8p23.2	Del_22q13.32	1.09e-06	1
Amp_20q13.31	Del_15q22.33	1.09e-07	1
Del_8p23.2	Del_18p11.31	1.09e-08	1
NF1	ATM	1.09e-14	1
Amp_13q22.1	Amp_20q12	1.09e-15	1
Del_8p23.2	Del_18q21.2	1.09e-15	1
Del_1p36.11	Del_21q11.2	1.11e-05	1
Del_4p16.2	Del_18q21.2	1.11e-08	1
Amp_13q12.13	Del_17p12	1.11e-09	1
22q-Del	Del_15q22.33	1.12e-06	1
ARID1A	BCOR	1.13e-05	1
4q-Del	Del_18q12.2	1.13e-10	1
Amp_20q13.31	Del_18q22.1	1.13e-17	1
4q-Del	Del_8p22	1.14e-07	1
Del_14q31.1	Del_15q11.2	1.14e-09	1
7q-Amp	Amp_20p11.21	1.15e-05	1
14q-Del	Del_8p23.2	1.15e-05	1
18p-Del	Del_5q22.2	1.15e-05	1
Del_15q11.2	Del_17p12	1.15e-16	1
18p-Del	18q-Del	1.15e-90	1
22q-Del	Del_1p36.11	1.17e-05	1
Del_8p22	Del_15q22.33	1.17e-06	1
2p-Amp	2q-Amp	1.17e-11	1
18p-Del	Del_17p12	1.17e-35	1
BMPR2	ALDH1A3	1.18e-05	1
TP53	18p-Del	1.18e-06	1
ARID1A	RB1	1.19e-05	1
13q-Amp	Amp_16p11.2	1.19e-06	1
18p-Del	Del_4q35.1	1.19e-08	1
TOP2B	ZNF486	1.1e-05	1
8p-Del	Del_15q21.1	1.1e-07	1
20p-Amp	Amp_13q22.1	1.21e-05	1
Amp_20q11.21	Del_15q21.1	1.21e-05	1
Del_6q26	Del_10q25.2	1.21e-05	1
NF2	ROS1	1.21e-06	1
Del_17p12	Del_18q12.2	1.21e-43	1
Del_17p12	Del_18q22.1	1.21e-45	1
15q-Del	Del_14q31.1	1.22e-06	1
Amp_8q24.21	Amp_20p11.21	1.22e-06	1
PRKDC	CREBBP	1.22e-08	1
Del_15q22.33	Del_22q13.32	1.22e-08	1
7q-Amp	Amp_20q11.21	1.22e-10	1
17p-Del	Del_14q31.1	1.22e-13	1
22q-Del	Del_1p33	1.24e-06	1
Del_10q23.31	Del_18q22.1	1.24e-06	1
Del_15q21.1	Del_22q13.32	1.24e-07	1
8p-Amp	Amp_8q12.1	1.24e-23	1
Amp_13q12.13	Amp_13q22.1	1.24e-82	1
13q-Amp	Amp_20p11.21	1.25e-05	1
17p-Del	8p-Del	1.25e-06	1
Del_1p36.11	Del_18q21.2	1.25e-19	1
Amp_8q12.1	Amp_8q24.21	1.25e-67	1
20q-Amp	15q-Del	1.26e-05	1
Amp_8q12.1	Amp_20p11.21	1.26e-05	1
RNF43	CDK12	1.26e-06	1
18q-Del	Del_4q35.1	1.26e-08	1
20q-Amp	Amp_13q12.2	1.26e-13	1
7p-Amp	Amp_20q13.31	1.26e-13	1
Amp_13q12.13	Del_8p22	1.27e-07	1
Amp_20q13.31	Del_18p11.31	1.27e-24	1
ROS1	TOP2B	1.29e-05	1
TOP2B	ATM	1.29e-05	1
7q-Amp	Amp_13q12.13	1.29e-09	1
PRKDC	SETD2	1.2e-06	1
Del_5q21.2	Del_18q22.1	1.2e-06	1
14q-Del	Amp_20q12	1.2e-09	1
RBBP7	CREBBP	1.31e-06	1
ARID1A	NF1	1.32e-05	1
MGA	ATM	1.32e-07	1
17p-Del	Del_17q24.3	1.32e-07	1
20q-Amp	Amp_20q13.31	1.32e-101	1
Amp_20q11.21	Del_18q21.2	1.32e-16	1
Amp_20p11.21	Del_17p12	1.33e-05	1
TP53	Del_17p12	1.33e-07	1
Del_14q11.2	Del_18p11.31	1.33e-20	1
8q-Amp	Amp_8p11.23	1.33e-25	1
18q-Del	Amp_20p11.21	1.34e-06	1
Del_4p16.2	Del_15q22.33	1.34e-07	1
Del_10q21.1	Del_10q25.2	1.34e-08	1
4q-Del	Del_18q21.2	1.34e-09	1
Amp_13q12.2	Amp_13q22.1	1.34e-90	1
Amp_8q24.21	Amp_20q12	1.35e-08	1
18q-Del	Amp_13q22.1	1.35e-12	1
PTCH1	ATM	1.35e-13	1
18p-Del	Amp_13q22.1	1.36e-10	1
18p-Del	Del_1p36.11	1.36e-14	1
17p-Del	Amp_20q13.31	1.37e-06	1
NF2	PTCH1	1.37e-08	1
RNF43	PRKDC	1.38e-05	1
Amp_13q12.13	Amp_20p11.21	1.38e-08	1
Del_18q12.2	Del_18q21.2	1.38e-116	1
18q-Del	Del_8p22	1.38e-16	1
LARP4B	GMPS	1.39e-05	1
Amp_20q11.21	Del_15q15.2	1.39e-06	1
Del_14q31.1	Del_18q12.2	1.39e-20	1
17p-Del	Del_18q12.2	1.39e-41	1
18p-Del	Del_22q13.32	1.3e-08	1
Del_1p13.2	Del_4q22.1	1.41e-05	1
Amp_8p11.21	Amp_20q12	1.41e-06	1
Amp_13q12.13	Del_18q12.2	1.42e-11	1
FAM9A	PRKDC	1.43e-05	1
Del_18q22.1	Del_21q11.2	1.43e-08	1
13q-Amp	Del_18q21.2	1.43e-09	1
Amp_8q24.21	Amp_20q11.21	1.44e-08	1
1q-Amp	Amp_1q31.1	1.44e-30	1
ASXL1	SETD2	1.45e-05	1
Del_4q22.1	Del_18q22.1	1.45e-08	1
Amp_13q12.2	Del_18q22.1	1.45e-11	1
8q-Amp	Amp_8q24.21	1.45e-68	1
8p-Del	Del_4q35.1	1.46e-05	1
Amp_20q13.31	Del_17p12	1.46e-11	1
Del_15q22.33	Del_17p12	1.47e-11	1
4p-Del	4q-Del	1.47e-32	1
4q-Del	Del_8p23.2	1.48e-07	1
Amp_8q12.1	Amp_20q13.31	1.48e-07	1
Amp_13q12.2	Del_15q15.2	1.49e-05	1
Amp_20q12	Del_15q15.2	1.49e-05	1
7q-Amp	Amp_20q12	1.49e-11	1
17p-Del	Del_15q15.2	1.49e-13	1
CDH1	MLH1	1.51e-07	1
Del_4q35.1	Del_8p22	1.51e-07	1
FBXW7	PTEN	1.52e-05	1
Del_5q21.2	Del_18q12.2	1.52e-05	1
1p-Del	Del_18q22.1	1.52e-06	1
4q-Del	Del_4q35.1	1.52e-35	1
17p-Del	18q-Del	1.52e-40	1
13q-Amp	Del_14q11.2	1.53e-06	1
ARID1A	CDH1	1.54e-05	1
P2RY13	ATM	1.54e-05	1
GPATCH8	ATM	1.54e-05	1
20q-Amp	Del_18q12.2	1.54e-17	1
8p-Amp	Amp_8q24.21	1.54e-23	1
ARID1A	NF2	1.55e-05	1
ASXL1	CTNNB1	1.55e-05	1
PLAGL2	HLA-A	1.55e-05	1
RBBP7	FKBP9	1.55e-05	1
Amp_5q22.3	Amp_13q12.13	1.55e-05	1
Amp_13q22.1	Amp_16p11.2	1.55e-06	1
MGA	ROS1	1.56e-05	1
Del_8p23.2	Del_15q11.2	1.56e-07	1
Amp_20q13.31	Del_8p23.2	1.56e-09	1
Del_3p14.2	Del_3q26.31	1.57e-05	1
Del_8p22	Del_15q15.2	1.57e-10	1
Amp_8q12.1	Del_8p22	1.57e-12	1
Amp_20q11.21	Del_14q11.2	1.58e-09	1
Amp_20p11.21	Del_18p11.31	1.58e-11	1
Amp_20q11.21	Amp_20q12	1.58e-118	1
8p-Del	Del_15q15.2	1.59e-08	1
Amp_13q12.2	Del_18q12.2	1.59e-11	1
Del_15q15.2	Del_17p12	1.59e-14	1
22q-Del	Del_15q11.2	1.5e-06	1
15q-Del	Amp_20q12	1.5e-08	1
Del_15q15.2	Del_18p11.31	1.5e-12	1
ALPK2	RB1	1.62e-05	1
RNF43	ZBTB20	1.62e-09	1
14q-Del	Del_14q11.2	1.63e-61	1
FAM9A	MPHOSPH10	1.64e-05	1
Del_10q21.1	Del_22q13.32	1.64e-05	1
14q-Del	Amp_13q12.13	1.64e-09	1
Amp_20q12	Del_18p11.31	1.64e-27	1
17p-Del	22q-Del	1.65e-09	1
18q-Del	Del_10q23.31	1.66e-05	1
BMPR2	SETD2	1.66e-06	1
13q-Amp	18p-Del	1.66e-08	1
5q-Del	Del_5q21.2	1.67e-21	1
4p-Del	Del_4p16.2	1.67e-33	1
13q-Amp	Del_8p22	1.68e-06	1
6p-Amp	Amp_6p21.1	1.68e-09	1
Del_1p33	Del_22q13.32	1.69e-07	1
20q-Amp	Del_1p36.11	1.6e-05	1
RNF43	DDX26B	1.6e-07	1
Del_3p26.3	Del_3p14.2	1.6e-10	1
Amp_20q12	Del_18q21.2	1.6e-17	1
Del_4p16.2	Del_18q12.2	1.71e-07	1
17p-Del	4p-Del	1.71e-08	1
20q-Amp	7q-Amp	1.71e-09	1
20q-Amp	Del_18q21.2	1.71e-15	1
TOP2B	CREBBP	1.72e-05	1
Amp_20p11.21	Del_18q12.2	1.72e-06	1
Del_8p22	Del_15q21.1	1.72e-09	1
Del_18q21.2	Del_22q13.32	1.72e-13	1
Del_10q25.2	Del_15q15.2	1.73e-05	1
21q-Del	Del_18p11.31	1.73e-06	1
TP53	Amp_20q11.21	1.73e-08	1
Del_15q22.33	Del_18q12.2	1.73e-24	1
Del_14q11.2	Del_14q31.1	1.73e-51	1
18p-Del	Del_15q21.1	1.74e-14	1
Amp_20q13.31	Del_1p36.11	1.75e-05	1
TP53	Del_18q21.2	1.75e-06	1
7p-Amp	8q-Amp	1.75e-06	1
Del_8p23.2	Del_15q21.1	1.75e-07	1
MGA	ALPK2	1.75e-08	1
17p-Del	Del_15q11.2	1.75e-12	1
Del_18p11.31	Del_18q12.2	1.75e-61	1
7q-Amp	Amp_8q12.1	1.76e-05	1
13q-Amp	7q-Amp	1.76e-08	1
8q-Amp	Del_8p22	1.77e-08	1
18q-Del	Del_8p23.2	1.77e-14	1
Amp_20p11.21	Amp_20q12	1.77e-55	1
GRB2	PTGDR	1.78e-05	1
Del_4q35.1	Del_18q22.1	1.78e-10	1
20q-Amp	Amp_13q12.13	1.79e-14	1
18p-Del	Del_14q11.2	1.7e-20	1
Del_4q22.1	Del_15q15.2	1.81e-05	1
ROS1	RBBP7	1.81e-06	1
14q-Del	Amp_13q12.2	1.81e-07	1
Del_14q11.2	Del_15q22.33	1.82e-06	1
Del_4p16.2	Del_22q13.32	1.82e-07	1
CDH1	RB1	1.82e-10	1
Del_15q11.2	Del_18q21.2	1.83e-22	1
18q-Del	Del_5q21.2	1.84e-05	1
13q-Amp	Del_8p23.2	1.84e-06	1
15q-Del	Del_15q11.2	1.84e-58	1
TP53	20q-Amp	1.86e-09	1
20q-Amp	Amp_8p11.21	1.87e-06	1
RNF43	ROS1	1.88e-06	1
Del_18p11.31	Del_18q21.2	1.88e-61	1
NF2	CTNNB1	1.89e-07	1
Del_1p13.2	Del_18q22.1	1.89e-10	1
15q-Del	18p-Del	1.89e-16	1
Amp_8q24.21	Del_8p22	1.89e-18	1
Amp_20p11.21	Del_18q21.2	1.8e-06	1
4p-Del	Del_8p23.2	1.8e-07	1
17p-Del	4q-Del	1.91e-08	1
Del_8p22	Del_8q11.1	1.93e-05	1
PTCH1	CREBBP	1.93e-06	1
1p-Del	Del_18q21.2	1.93e-06	1
Del_1p13.2	Del_17p12	1.93e-06	1
Amp_20q12	Amp_20q13.31	1.93e-111	1
Del_1p36.11	Del_1p33	1.93e-17	1
18q-Del	5q-Del	1.94e-05	1
4p-Del	8p-Del	1.94e-05	1
NLRC4	ATM	1.94e-06	1
7p-Amp	Amp_8p11.23	1.94e-06	1
Amp_13q12.13	Amp_16p11.2	1.95e-05	1
22q-Del	Del_18q12.2	1.95e-14	1
14q-Del	15q-Del	1.96e-06	1
Del_14q31.1	Del_17p12	1.96e-14	1
Del_10q23.31	Del_15q15.2	1.97e-05	1
B2M	ZBTB20	1.98e-05	1
7p-Amp	Amp_8q12.1	1.99e-07	1
Amp_13q12.2	Del_8p23.2	1.99e-08	1
8p-Amp	Amp_8p11.21	1.99e-23	1
RNF43	BMPR2	1e-12	1
8q-Amp	Amp_8q12.1	1e-66	1
BMPR2	SLC12A6	2.01e-05	1
4p-Del	Del_14q31.1	2.01e-06	1
ROS1	CTNNB1	2.02e-06	1
20p-Amp	7p-Amp	2.02e-07	1
20p-Amp	Amp_13q12.2	2.02e-07	1
PRKDC	TOP2B	2.03e-05	1
20p-Del	Del_18q22.1	2.03e-08	1
17p-Del	Del_22q13.32	2.04e-10	1
PRKDC	NF1	2.05e-07	1
14q-Del	Del_17p12	2.05e-15	1
4q-Del	Del_15q11.2	2.06e-06	1
Del_8p23.2	Del_17p12	2.06e-15	1
Del_15q21.1	Del_15q22.33	2.07e-50	1
18q-Del	20p-Del	2.08e-07	1
Amp_13q12.2	Del_17p12	2.09e-09	1
Amp_13q12.2	Del_18p11.31	2.09e-11	1
Del_1p13.2	Del_14q31.1	2.11e-05	1
15q-Del	8p-Del	2.11e-06	1
Del_14q11.2	Del_15q11.2	2.11e-08	1
20p-Amp	Amp_20q12	2.11e-50	1
Del_17p12	Del_18p11.31	2.13e-29	1
RNF43	TOP2B	2.14e-07	1
NF1	C14orf184	2.15e-05	1
18q-Del	Del_18q12.2	2.15e-121	1
15q-Del	18q-Del	2.15e-21	1
Del_15q11.2	Del_15q22.33	2.15e-51	1
14q-Del	Del_15q11.2	2.16e-08	1
Amp_20q12	Del_1p36.11	2.17e-05	1
20p-Amp	18p-Del	2.17e-07	1
PTCH1	SMAD4	2.17e-08	1
17p-Del	Del_15q21.1	2.17e-12	1
Del_1p33	Del_1p13.2	2.17e-25	1
RNF43	MGA	2.18e-07	1
ASXL1	PTEN	2.19e-05	1
Del_8p23.2	Del_15q22.33	2.19e-06	1
ROS1	HLA-A	2.1e-05	1
4q-Del	Amp_13q12.13	2.1e-06	1
Amp_20q12	Del_14q31.1	2.1e-08	1
BMPR2	ATM	2.21e-06	1
NF1	CREBBP	2.22e-06	1
14q-Del	Amp_13q22.1	2.23e-07	1
Del_8p23.2	Del_8p22	2.24e-98	1
Del_4p16.2	Del_15q15.2	2.25e-06	1
22q-Del	Del_14q31.1	2.25e-07	1
Del_4q35.1	Del_22q13.32	2.26e-05	1
18p-Del	Amp_13q12.2	2.26e-11	1
MAPK6	RLIM	2.27e-05	1
Del_15q21.1	Del_18p11.31	2.27e-11	1
7p-Amp	Amp_19p13.2	2.29e-05	1
14q-Del	Del_4q35.1	2.29e-06	1
Del_4q35.1	Del_21q11.2	2.29e-06	1
7p-Amp	Del_18q22.1	2.2e-05	1
8p-Del	Del_18q21.2	2.2e-08	1
Amp_13q12.13	Del_18q21.2	2.2e-11	1
5q-Del	Del_17p12	2.31e-05	1
Amp_20q13.31	Del_14q11.2	2.31e-08	1
Amp_8p11.23	Amp_20q12	2.32e-05	1
Del_4q22.1	Del_15q21.1	2.32e-05	1
Amp_13q12.2	Amp_20p11.21	2.32e-08	1
7p-Amp	Amp_13q22.1	2.32e-12	1
RNF43	MLH1	2.33e-05	1
Del_1p13.2	Del_18p11.31	2.33e-05	1
DDX26B	BMPR2	2.33e-06	1
18p-Del	Del_4p16.2	2.33e-08	1
MGA	BCORL1	2.35e-06	1
Del_8p23.2	Del_15q15.2	2.35e-08	1
Del_12p13.1	Del_18q22.1	2.36e-05	1
Amp_13q12.13	Amp_20q13.31	2.36e-18	1
ATM	CREBBP	2.38e-07	1
Amp_8p11.21	Del_8p23.2	2.39e-10	1
13q-Amp	Amp_20q12	2.39e-13	1
Del_15q21.1	Del_18q22.1	2.39e-18	1
7p-Amp	Del_8p23.2	2.3e-05	1
4p-Del	Del_18p11.31	2.3e-07	1
18q-Del	Del_15q22.33	2.3e-22	1
7p-Amp	Amp_8p11.21	2.41e-05	1
Del_8p22	Del_14q31.1	2.41e-07	1
Amp_20q13.31	Del_8p22	2.41e-10	1
20q-Amp	Del_17p12	2.41e-12	1
TP53	Del_18q22.1	2.42e-07	1
15q-Del	Del_18q22.1	2.42e-22	1
15q-Del	17p-Del	2.43e-11	1
22q-Del	Del_1p13.2	2.44e-08	1
16p-Amp	16q-Amp	2.44e-20	1
Del_15q15.2	Del_18q21.2	2.44e-21	1
CDH1	NF1	2.45e-10	1
8p-Del	Del_15q11.2	2.46e-07	1
8p-Del	Del_18q22.1	2.46e-09	1
18p-Del	Del_14q31.1	2.46e-23	1
C11orf30	PIK3R1	2.47e-05	1
RB1	CREBBP	2.49e-06	1
20q-Amp	Amp_8q12.1	2.49e-07	1
Amp_20q11.21	Del_18p11.31	2.49e-25	1
Amp_8p11.21	Amp_8q24.21	2.49e-40	1
ZBTB20	ROS1	2.4e-06	1
17p-Del	Del_18q22.1	2.51e-44	1
17p-Del	Del_4p16.2	2.52e-06	1
22q-Del	Del_18p11.31	2.53e-05	1
7p-Amp	18p-Del	2.55e-05	1
Del_5q22.2	Del_18q21.2	2.55e-05	1
8p-Del	Del_8p22	2.55e-52	1
1p-Del	Del_4p16.2	2.56e-06	1
8p-Del	Del_17p12	2.56e-08	1
PTCH1	PTEN	2.57e-17	1
14q-Del	22q-Del	2.58e-06	1
18p-Del	4p-Del	2.58e-09	1
ALPK2	BMPR2	2.59e-07	1
13q-Amp	Amp_20q11.21	2.59e-13	1
18q-Del	Del_22q13.32	2.59e-13	1
16q-Amp	Amp_13q12.2	2.5e-05	1
RB1	CTNNB1	2.61e-05	1
Del_4q22.1	Del_18q21.2	2.61e-08	1
18p-Del	Del_18q21.2	2.61e-80	1
8p-Del	Del_18p11.31	2.63e-05	1
NF1	CTNNB1	2.63e-07	1
Del_10q23.31	Del_18q21.2	2.63e-07	1
Del_4q35.1	Del_18q12.2	2.63e-09	1
Del_18q12.2	Del_22q13.32	2.63e-15	1
Amp_17q12	Amp_17q24.1	2.63e-19	1
18q-Del	Del_17p12	2.63e-41	1
PRKDC	PTEN	2.64e-06	1
4q-Del	8p-Del	2.64e-06	1
CDH1	ATM	2.64e-09	1
NF1	PTEN	2.64e-13	1
14q-Del	Del_15q21.1	2.66e-07	1
Amp_20q11.21	Del_17p12	2.66e-12	1
4p-Del	Del_1p33	2.67e-05	1
SELPLG	ATM	2.68e-05	1
RB1	BCORL1	2.68e-05	1
RB1	SLC12A6	2.68e-05	1
FKBP9	ATM	2.68e-05	1
13q-Amp	Del_18q12.2	2.6e-09	1
Amp_20p11.21	Amp_20q11.21	2.6e-58	1
Del_18q21.2	Del_21q11.2	2.71e-08	1
ROS1	LARP4B	2.72e-05	1
8p-Amp	Amp_8p11.23	2.72e-22	1
20p-Amp	Amp_13q12.13	2.74e-07	1
17p-Del	Del_15q22.33	2.74e-09	1
Amp_20q12	Del_8p22	2.74e-09	1
Amp_13q22.1	Del_18q21.2	2.74e-12	1
14q-Del	Del_1p36.11	2.77e-06	1
ALPK2	ATM	2.77e-07	1
15q-Del	Del_15q21.1	2.79e-54	1
7q-Amp	8q-Amp	2.81e-05	1
STARD3NL	SLC12A6	2.81e-06	1
SLC26A8	ATM	2.81e-06	1
Amp_13q22.1	Amp_20p11.21	2.81e-07	1
TP53	Amp_13q12.2	2.83e-05	1
15q-Del	4q-Del	2.84e-05	1
RNF43	BCOR	2.85e-06	1
Del_10q25.2	Del_22q13.32	2.85e-06	1
15q-Del	Amp_20q13.31	2.85e-07	1
ALPK2	LARP4B	2.85e-09	1
20q-Amp	Del_18p11.31	2.85e-26	1
ZBTB20	BMPR2	2.86e-05	1
PRKDC	PTCH1	2.86e-06	1
Amp_8q24.21	Amp_20q13.31	2.86e-10	1
Amp_13q12.2	Amp_20q11.21	2.86e-16	1
7p-Amp	Amp_20p11.21	2.87e-08	1
Amp_13q12.2	Del_14q31.1	2.87e-08	1
13q-Amp	Del_4q35.1	2.89e-05	1
Del_4p16.2	Del_15q21.1	2.89e-06	1
NF2	ALPK2	2.91e-05	1
5q-Del	Del_5q12.1	2.91e-21	1
PRKDC	MGA	2.92e-06	1
18p-Del	21q-Del	2.93e-07	1
Amp_8p11.21	Amp_8q12.1	2.95e-46	1
18p-Del	Del_1p13.2	2.96e-06	1
Del_15q22.33	Del_18q21.2	2.96e-24	1
Amp_17q24.1	Del_17p12	2.97e-05	1
Del_1p36.11	Del_14q11.2	2.97e-05	1
ARID1A	RNF43	2.97e-06	1
18p-Del	5q-Del	2.98e-05	1
ASXL1	PTCH1	2.98e-06	1
Amp_8q12.1	Amp_20q12	2.98e-07	1
20p-Del	Del_18q21.2	2.99e-08	1
Del_5q21.2	Del_15q21.1	2e-04	1
4p-Del	Del_1p13.2	2e-05	1
13q-Amp	17p-Del	2e-07	1
17p-Del	Amp_13q22.1	2e-08	1
7p-Amp	Amp_20q11.21	2e-12	1
Del_8p23.2	Del_18q22.1	2e-16	1
PTEN	ATM	3.01e-14	1
Del_12p13.1	Del_18q21.2	3.02e-05	1
7p-Amp	Del_8p22	3.03e-08	1
ZBTB20	ATM	3.04e-05	1
Del_1p33	Del_18q12.2	3.05e-05	1
Amp_13q22.1	Del_17p12	3.06e-08	1
Amp_13q12.13	Del_14q11.2	3.06e-09	1
PTEN	KDM6A	3.07e-07	1
MVK	DDX26B	3.08e-08	1
NF1	RB1	3.08e-10	1
ATM	CTNNB1	3.09e-08	1
20p-Amp	Amp_20q13.31	3.09e-44	1
20q-Amp	Amp_13q22.1	3.11e-13	1
C11orf30	HLA-A	3.12e-06	1
SETD2	ATM	3.12e-06	1
17p-Del	Amp_20q11.21	3.12e-07	1
Del_6p25.3	Del_6q26	3.12e-07	1
Del_8p22	Del_15q11.2	3.12e-08	1
Del_1p13.2	Del_18q21.2	3.15e-10	1
18q-Del	Del_5q22.2	3.16e-05	1
Del_8p23.2	Del_14q31.1	3.17e-07	1
Del_1p13.2	Del_18q12.2	3.17e-10	1
15q-Del	Del_18p11.31	3.17e-13	1
Del_10q23.31	Del_10q25.2	3.17e-17	1
8p-Del	Del_4q22.1	3.18e-06	1
22q-Del	Del_18q22.1	3.18e-13	1
Del_4p16.2	Del_4q22.1	3.19e-15	1
15q-Del	Del_8p22	3.1e-07	1
Amp_13q12.13	Del_14q31.1	3.1e-10	1
20q-Amp	Del_14q31.1	3.21e-07	1
CDH1	PTCH1	3.22e-09	1
Del_17p12	Del_18q21.2	3.23e-44	1
Del_17q24.3	Del_19p13.3	3.25e-05	1
NF2	NF1	3.26e-09	1
7p-Amp	Amp_13q12.2	3.26e-13	1
Amp_13q12.2	Del_8p22	3.27e-09	1
Del_4p16.2	Del_4q35.1	3.27e-12	1
Del_4q22.1	Del_10q21.1	3.2e-05	1
14q-Del	Amp_20q11.21	3.2e-10	1
22q-Del	Del_15q15.2	3.32e-06	1
Del_6q26	Del_10q23.31	3.32e-06	1
Del_4q22.1	Del_8p22	3.32e-08	1
PRKDC	FYN	3.35e-06	1
22q-Del	Del_17p12	3.35e-08	1
Del_15q21.1	Del_17p12	3.36e-13	1
Del_14q31.1	Del_18q22.1	3.36e-21	1
Del_1p36.11	Del_17p12	3.39e-08	1
22q-Del	Del_10q21.1	3.3e-05	1
Del_1p33	Del_18q21.2	3.3e-05	1
Del_4p16.2	Del_15q11.2	3.3e-08	1
4p-Del	Del_8q11.1	3.41e-05	1
Del_14q31.1	Del_22q13.32	3.41e-06	1
GPATCH8	CREBBP	3.42e-05	1
4p-Del	Del_21q11.2	3.42e-05	1
14q-Del	Del_18q22.1	3.42e-19	1
NF2	PTEN	3.43e-10	1
NF1	PIK3R1	3.45e-06	1
ROS1	CREBBP	3.46e-05	1
4p-Del	Del_15q22.33	3.46e-06	1
PRRG1	DDX26B	3.49e-05	1
Amp_20q12	Del_15q22.33	3.49e-08	1
CDH1	SETD2	3.4e-05	1
FMN2	RB1	3.4e-06	1
1p-Del	Del_22q13.32	3.51e-06	1
Amp_8p11.21	Amp_20q13.31	3.51e-08	1
Del_15q11.2	Del_15q21.1	3.52e-57	1
Amp_8p11.23	Amp_8q12.1	3.53e-26	1
Amp_8p11.23	Amp_20q13.31	3.54e-07	1
20p-Amp	Amp_20p11.21	3.54e-51	1
OR4D10	C11orf30	3.55e-05	1
C2orf29	PTEN	3.55e-05	1
Del_4p16.2	Del_17p12	3.55e-07	1
Del_1p36.11	Del_18p11.31	3.55e-12	1
Amp_13q22.1	Del_8p22	3.57e-07	1
Del_12p13.1	Del_17p12	3.57e-07	1
Amp_13q12.13	Del_18p11.31	3.57e-11	1
NF2	RB1	3.58e-09	1
20q-Amp	18q-Del	3.58e-18	1
17p-Del	Del_5q21.2	3.59e-05	1
ROS1	ATM	3.5e-07	1
TP53	Del_8p23.2	3.62e-08	1
14q-Del	Del_18q21.2	3.62e-20	1
ASXL1	CREBBP	3.63e-05	1
ARID1A	ATM	3.63e-07	1
Amp_13q12.13	Amp_20q11.21	3.64e-17	1
Amp_20q11.21	Del_18q22.1	3.65e-17	1
5q-Del	Del_18q12.2	3.66e-05	1
Del_4q22.1	Del_18q12.2	3.66e-08	1
7q-Amp	Amp_19p13.2	3.67e-05	1
EGR1	SLC26A8	3.68e-05	1
Amp_20p11.21	Del_18q22.1	3.68e-06	1
20q-Amp	7p-Amp	3.68e-12	1
PTCH1	NLRC4	3.6e-06	1
ROS1	MPHOSPH10	3.71e-06	1
PTEN	CTNNB1	3.71e-12	1
7p-Amp	Amp_13q12.13	3.71e-12	1
4q-Del	Del_4p16.2	3.72e-17	1
WNT1	PLAGL2	3.73e-05	1
18p-Del	Del_5q21.2	3.73e-05	1
EGR1	CDK12	3.76e-05	1
FMN2	PTEN	3.76e-07	1
FAM9A	ZBTB20	3.77e-05	1
ZBTB20	GRB2	3.77e-05	1
18p-Del	Del_15q11.2	3.77e-18	1
16q-Amp	Amp_13q12.13	3.79e-05	1
18p-Del	Del_4q22.1	3.79e-05	1
ARID1A	FAM9A	3.79e-06	1
Del_4p16.2	Del_14q31.1	3.7e-06	1
18q-Del	Del_4q22.1	3.7e-08	1
4p-Del	Del_4q35.1	3.84e-23	1
8q-Amp	Amp_20q12	3.85e-08	1
NF1	PTCH1	3.85e-11	1
DIP2B	ROS1	3.86e-06	1
14q-Del	Del_15q15.2	3.86e-08	1
PTCH1	TOP2B	3.87e-05	1
Del_12p13.1	Del_14q11.2	3.87e-07	1
4q-Del	Del_1p13.2	3.88e-05	1
Amp_20q12	Del_18q22.1	3.89e-18	1
Del_4q35.1	Del_14q31.1	3.8e-07	1
Amp_13q12.2	Amp_20q12	3.8e-16	1
15q-Del	Del_4q22.1	3.91e-06	1
Amp_8q12.1	Del_8p23.2	3.91e-13	1
15q-Del	Del_15q22.33	3.91e-68	1
18q-Del	4q-Del	3.92e-10	1
Del_1p33	Del_4p16.2	3.95e-05	1
Del_14q11.2	Del_15q21.1	3.95e-06	1
Del_18p11.31	Del_18q22.1	3.95e-63	1
Amp_13q12.13	Amp_13q12.2	3.96e-122	1
WNT1	TOP2B	3.97e-06	1
17p-Del	Amp_13q12.13	3.98e-09	1
RNF43	ST3GAL6	3e-05	1
ALPK2	SETD2	4.03e-08	1
Amp_20q13.31	Del_18q12.2	4.03e-18	1
Amp_20q13.31	Del_15q15.2	4.05e-05	1
ASXL1	SLC12A6	4.07e-05	1
NF2	CREBBP	4.07e-06	1
20p-Del	Del_18q12.2	4.07e-09	1
FAM9A	ROS1	4.08e-05	1
RBBP7	SETD2	4.08e-05	1
Del_17p12	Del_17q24.3	4.08e-08	1
Del_5q21.2	Del_5q22.2	4.12e-48	1
MAPK6	LARP4B	4.13e-06	1
13q-Amp	Del_18q22.1	4.14e-09	1
13q-Amp	Amp_13q22.1	4.14e-102	1
Amp_8p11.21	Del_8p22	4.15e-10	1
NLRC4	RB1	4.17e-06	1
18q-Del	Del_12p13.1	4.17e-06	1
ROS1	BMPR2	4.18e-07	1
Del_1p13.2	Del_15q22.33	4.19e-05	1
15q-Del	Del_14q11.2	4.1e-06	1
22q-Del	Del_22q13.32	4.21e-58	1
18q-Del	Del_4p16.2	4.25e-08	1
22q-Del	Del_14q11.2	4.26e-06	1
22q-Del	Del_15q21.1	4.26e-06	1
SMAD4	RB1	4.26e-07	1
RNF43	PTEN	4.27e-05	1
15q-Del	4p-Del	4.28e-06	1
17p-Del	Amp_13q12.2	4.28e-09	1
TP53	Amp_20q12	4.28e-10	1
Amp_13q22.1	Del_18p11.31	4.29e-10	1
Del_10q23.31	Del_18q12.2	4.2e-05	1
7p-Amp	Del_18q21.2	4.32e-05	1
Del_3p26.3	Del_4p16.2	4.32e-05	1
Del_4q35.1	Del_8p23.2	4.32e-06	1
4q-Del	Del_17p12	4.32e-08	1
18p-Del	Amp_13q12.13	4.32e-11	1
TP53	Del_18q12.2	4.33e-06	1
Del_1p33	Del_18q22.1	4.33e-06	1
18q-Del	Del_15q11.2	4.33e-21	1
4q-Del	Del_14q31.1	4.34e-05	1
13q-Amp	Amp_20q13.31	4.34e-14	1
BCL9	ROS1	4.35e-06	1
NLRC4	ROS1	4.35e-06	1
Del_14q31.1	Del_18q21.2	4.36e-22	1
DIP2B	CDK12	4.38e-05	1
LARP4B	CDK12	4.38e-05	1
20q-Amp	8q-Amp	4.38e-07	1
RB1	TOP2B	4.39e-05	1
14q-Del	Amp_20q13.31	4.3e-09	1
Amp_20q11.21	Del_18q12.2	4.41e-18	1
ROS1	RB1	4.42e-05	1
17p-Del	Del_6q26	4.42e-05	1
Del_1p36.11	Del_18q22.1	4.42e-20	1
Del_5q22.2	Del_18q22.1	4.43e-06	1
1p-Del	Del_21q11.2	4.45e-05	1
CDH1	ALPK2	4.47e-07	1
17q-Amp	Amp_17q24.1	4.47e-26	1
CHUK	TOP2B	4.48e-05	1
C11orf30	TOP2B	4.48e-05	1
Amp_8p11.23	Amp_8p11.21	4.48e-44	1
17p-Del	5q-Del	4.49e-05	1
RNF43	ATM	4.4e-05	1
PRKDC	ASXL1	4.51e-05	1
17p-Del	Del_17p12	4.53e-88	1
MLH1	PTCH1	4.54e-07	1
Del_14q31.1	Del_18p11.31	4.54e-21	1
18p-Del	Del_18q22.1	4.55e-80	1
20q-Amp	Amp_8q24.21	4.56e-09	1
4q-Del	Del_17q24.3	4.57e-05	1
21q-Del	Del_18q12.2	4.57e-07	1
20q-Amp	Del_14q11.2	4.61e-09	1
15q-Del	Amp_13q12.2	4.62e-05	1
21q-Del	Del_21q11.2	4.73e-46	1
SMAD4	CTNNB1	4.74e-06	1
21q-Del	Del_18q21.2	4.78e-06	1
14q-Del	Del_14q31.1	4.78e-72	1
ARID1A	DDX26B	4.7e-05	1
MLH1	PTEN	4.7e-10	1
15q-Del	Amp_20q11.21	4.81e-09	1
22q-Del	Del_4p16.2	4.82e-05	1
DDX26B	BCORL1	4.82e-06	1
4q-Del	Del_1p36.11	4.83e-06	1
21q-Del	Del_1p36.11	4.84e-05	1
C11orf30	BMPR2	4.84e-07	1
FAM123B	BMPR2	4.85e-05	1
NLRC4	CREBBP	4.85e-05	1
BCORL1	CREBBP	4.85e-05	1
PRRG1	RBBP7	4.87e-05	1
4q-Del	Amp_13q12.2	4.87e-06	1
Del_15q11.2	Del_22q13.32	4.87e-08	1
7q-Amp	Amp_20q13.31	4.88e-10	1
Amp_13q22.1	Amp_20q13.31	4.89e-17	1
Del_10q21.1	Del_10q23.31	4.91e-09	1
Amp_20q11.21	Del_8p23.2	4.92e-07	1
Del_15q22.33	Del_18p11.31	4.92e-12	1
18q-Del	Del_18q21.2	4.93e-111	1
Del_4q22.1	Del_17p12	4.94e-09	1
Del_6q26	Del_17p12	4.96e-05	1
Amp_20q13.31	Del_18q21.2	4.9e-17	1
20q-Amp	Amp_8p11.23	5.01e-05	1
RNF43	LARP4B	5.03e-07	1
Del_4p16.2	Del_5q12.1	5.04e-05	1
20q-Amp	Del_15q22.33	5.05e-05	1
22q-Del	Del_8p23.2	5.06e-05	1
RNF43	CREBBP	5.07e-05	1
Del_15q15.2	Del_15q22.33	5.08e-51	1
Amp_20q12	Del_18q12.2	5.09e-20	1
Del_4q35.1	Del_18q21.2	5.11e-11	1
DIP2B	CREBBP	5.13e-05	1
LARP4B	CREBBP	5.13e-05	1
5q-Del	Del_5q22.2	5.15e-20	1
Del_5q12.1	Del_5q22.2	5.16e-18	1
8p-Del	Del_4p16.2	5.17e-05	1
PTCH1	CTNNB1	5.17e-07	1
20q-Amp	Del_18q22.1	5.17e-16	1
Amp_13q12.2	Del_18q21.2	5.19e-12	1
22q-Del	Del_10q25.2	5.1e-07	1
Del_8p23.2	Del_8q11.1	5.21e-07	1
17p-Del	Del_18p11.31	5.23e-25	1
Del_8p22	Del_18q21.2	5.24e-19	1
7q-Amp	8p-Amp	5.25e-05	1
18q-Del	Del_18p11.31	5.27e-70	1
18q-Del	Amp_20q13.31	5.28e-19	1
Amp_20p11.21	Amp_20q13.31	5.29e-49	1
Del_18p11.31	Del_21q11.2	5.2e-10	1
Amp_8p11.23	Amp_8q24.21	5.32e-25	1
2p-Amp	Amp_2q33.1	5.35e-10	1
Del_6q26	Del_18q22.1	5.36e-05	1
Del_18q22.1	Del_19p13.3	5.36e-05	1
APC	PTEN	5.36e-06	1
P2RY13	MAP4K3	5.36e-07	1
DIP2B	L1TD1	5.37e-05	1
FKBP9	LARP4B	5.37e-05	1
7p-Amp	Amp_20q12	5.37e-13	1
Del_4q35.1	Del_18p11.31	5.41e-08	1
Amp_20q11.21	Amp_20q13.31	5.41e-102	1
15q-Del	Del_18q12.2	5.41e-22	1
4p-Del	Del_18q12.2	5.44e-08	1
18p-Del	Del_18p11.31	5.45e-104	1
8p-Del	Amp_20q12	5.4e-05	1
Amp_8q12.1	Amp_20q11.21	5.4e-08	1
SLC26A8	CREBBP	5.53e-05	1
FBXW7	ATM	5.53e-06	1
Amp_20q11.21	Del_14q31.1	5.53e-09	1
Del_14q31.1	Del_15q22.33	5.54e-07	1
Amp_8q24.21	Del_8p23.2	5.59e-20	1
14q-Del	18p-Del	5.59e-23	1
Amp_13q12.13	Amp_20q12	5.5e-17	1
Amp_13q12.13	Del_18q22.1	5.61e-11	1
Del_15q11.2	Del_18q12.2	5.63e-21	1
1p-Del	Del_18q12.2	5.64e-07	1
Amp_13q12.2	Del_14q11.2	5.64e-08	1
Del_17p12	Del_19p13.3	5.66e-08	1
MVK	BCORL1	5.69e-08	1
1p-Del	4p-Del	5.73e-05	1
RNF43	HLA-A	5.74e-05	1
Amp_13q12.13	Del_8p23.2	5.75e-07	1
8q-Amp	Amp_20q13.31	5.75e-08	1
Amp_20q12	Del_8p23.2	5.76e-09	1
18q-Del	21q-Del	5.77e-07	1
Del_1p13.2	Del_22q13.32	5.78e-09	1
18p-Del	Del_21q11.2	5.78e-10	1
Amp_8q24.21	Del_18q22.1	5.79e-05	1
8p-Del	Del_15q22.33	5.79e-06	1
Del_1p36.11	Del_18q12.2	5.79e-22	1
PRKDC	SLC12A6	5.7e-05	1
4p-Del	Del_18q22.1	5.81e-09	1
18p-Del	Amp_20p11.21	5.81e-11	1
Del_15q11.2	Del_18q22.1	5.83e-23	1
18p-Del	8p-Del	5.87e-06	1
B2M	ATM	5.89e-05	1
18p-Del	22q-Del	5.91e-08	1
4q-Del	Del_1p33	5.93e-05	1
NF2	DDX26B	5.93e-06	1
20q-Amp	Del_8p23.2	5.94e-08	1
Amp_17q12	Amp_20q11.21	5.98e-05	1
8p-Del	Del_18q12.2	5.9e-09	1
18q-Del	Del_15q21.1	5.9e-17	1
SELPLG	PTCH1	5e-05	1
RNF43	ZNF486	6.02e-05	1
MVK	BMPR2	6.02e-07	1
PRKDC	BMPR2	6.03e-05	1
16p-Amp	Amp_13q22.1	6.04e-05	1
Del_4q35.1	Del_17p12	6.04e-09	1
18q-Del	Del_1p36.11	6.04e-22	1
18p-Del	Del_18q12.2	6.04e-80	1
Amp_8q24.21	Del_18q21.2	6.06e-05	1
8p-Del	Del_8p23.2	6.06e-51	1
PRKDC	DIP2B	6.08e-05	1
15q-Del	Del_18q21.2	6.08e-22	1
ROS1	GPATCH8	6.11e-05	1
SMAD4	ATM	6.11e-06	1
8q-Amp	Amp_8p11.21	6.11e-39	1
NF1	DDX26B	6.12e-05	1
C11orf30	ROS1	6.13e-05	1
B2M	PRKDC	6.13e-07	1
7p-Amp	Amp_8q24.21	6.15e-09	1
15q-Del	Del_22q13.32	6.15e-09	1
FKBP9	MAP4K3	6.17e-05	1
4p-Del	Del_3p26.3	6.21e-05	1
ARID1A	ROS1	6.22e-05	1
22q-Del	Del_18q21.2	6.23e-13	1
17p-Del	Del_1p36.11	6.24e-07	1
14q-Del	Del_18q12.2	6.25e-21	1
DIP2B	PIK3R1	6.26e-05	1
20p-Amp	Amp_20q11.21	6.26e-49	1
RNF43	BCL9	6.27e-06	1
17p-Del	Del_12p13.1	6.31e-06	1
Del_1p36.11	Del_22q13.32	6.31e-08	1
DIP2B	SLC12A6	6.32e-05	1
NF2	ATM	6.32e-09	1
PRKDC	SLC26A8	6.34e-05	1
17p-Del	Del_8p22	6.34e-15	1
NF2	SMAD4	6.36e-06	1
CDH1	CTNNB1	6.38e-06	1
17q-Amp	2p-Amp	6.41e-06	1
22q-Del	Del_8p22	6.43e-05	1
18q-Del	22q-Del	6.43e-12	1
20p-Amp	18q-Del	6.44e-05	1
20p-Amp	20q-Amp	6.45e-59	1
18p-Del	Del_8p22	6.46e-12	1
PIK3R1	ATM	6.4e-05	1
20q-Amp	Amp_20q11.21	6.4e-96	1
Del_17p12	Del_22q13.32	6.53e-09	1
18q-Del	Del_14q31.1	6.53e-22	1
Del_15q21.1	Del_18q21.2	6.58e-18	1
14q-Del	Del_22q13.32	6.59e-05	1
Del_21q11.2	Del_22q13.32	6.59e-05	1
RB1	PTEN	6.61e-13	1
Amp_20q12	Del_15q11.2	6.62e-08	1
MAPK6	ROS1	6.63e-05	1
ROS1	L1TD1	6.63e-05	1
4p-Del	Del_15q15.2	6.63e-06	1
RNF43	ALPK2	6.63e-07	1
17p-Del	Amp_20q12	6.63e-07	1
20q-Amp	18p-Del	6.65e-23	1
Del_8q11.1	Del_18q22.1	6.66e-05	1
21q-Del	Del_18q22.1	6.66e-07	1
20q-Amp	Amp_20p11.21	6.67e-49	1
18p-Del	Amp_20q13.31	6.69e-23	1
RNF43	BCORL1	6.6e-07	1
RNF43	SLC12A6	6.6e-07	1
8q-Amp	Amp_20q11.21	6.71e-09	1
Del_8p23.2	Del_18q12.2	6.73e-16	1
17p-Del	Del_4q35.1	6.75e-09	1
PLAGL2	TOP2B	6.76e-05	1
SLC26A8	L1TD1	6.76e-08	1
PTCH1	BMPR2	6.78e-08	1
4q-Del	5q-Del	6.84e-05	1
13q-Amp	Amp_13q12.2	6.84e-95	1
2q-Amp	Amp_2q33.1	6.85e-11	1
Del_18q21.2	Del_19p13.3	6.86e-05	1
TP53	Amp_13q12.13	6.87e-05	1
Del_4q22.1	Del_22q13.32	6.87e-06	1
Amp_13q12.13	Del_4q35.1	6.91e-06	1
TOP2B	HLA-A	6.93e-05	1
18q-Del	Del_19p13.3	6.93e-05	1
18p-Del	4q-Del	6.93e-08	1
18p-Del	Del_15q15.2	6.93e-17	1
MAPK6	RB1	6.94e-06	1
MLH1	CTNNB1	6.96e-06	1
14q-Del	Del_15q22.33	6.97e-07	1
20q-Amp	Del_8p22	6.97e-08	1
MLH1	RB1	6.97e-10	1
Del_1p36.11	Del_14q31.1	6.98e-07	1
PRKDC	CDK12	6e-07	1
Del_17q24.3	Del_18q21.2	7.01e-05	1
Del_14q31.1	Del_15q21.1	7.04e-08	1
14q-Del	Del_8p22	7.05e-06	1
Del_14q11.2	Del_15q15.2	7.05e-07	1
18q-Del	Amp_20q12	7.06e-21	1
FMN2	MAP4K3	7.08e-05	1
PRKDC	CTNNB1	7.08e-06	1
18p-Del	Del_8p23.2	7.09e-10	1
Amp_13q22.1	Del_14q11.2	7.11e-08	1
16p-Amp	Amp_16p11.2	7.11e-22	1
15q-Del	Del_15q15.2	7.12e-55	1
SLC12A6	CREBBP	7.13e-06	1
13q-Amp	7p-Amp	7.13e-11	1
HLA-A	GPATCH8	7.14e-05	1
ROS1	ALDH1A3	7.15e-06	1
17p-Del	Del_14q11.2	7.15e-15	1
PRKDC	ROS1	7.16e-08	1
RNF43	MVK	7.16e-10	1
PTCH1	PIK3R1	7.21e-05	1
18q-Del	1p-Del	7.24e-06	1
8q-Amp	Del_8p23.2	7.25e-09	1
21q-Del	Del_22q13.32	7.26e-06	1
18q-Del	Del_15q15.2	7.2e-20	1
Del_8p22	Del_18q22.1	7.2e-20	1
13q-Amp	Amp_13q12.13	7.32e-90	1
20q-Amp	8p-Del	7.37e-05	1
PRKDC	L1TD1	7.38e-06	1
PRKDC	FKBP9	7.38e-06	1
4p-Del	Del_15q11.2	7.41e-08	1
13q-Amp	Del_18p11.31	7.41e-09	1
2q-Amp	Amp_11p15.5	7.44e-05	1
Amp_20q11.21	Del_8p22	7.44e-08	1
Amp_13q12.2	Del_4p16.2	7.45e-05	1
TP53	17p-Del	7.45e-06	1
Amp_8p11.23	Del_8p22	7.46e-05	1
Amp_20q12	Del_17p12	7.47e-13	1
Del_10q25.2	Del_18q22.1	7.48e-05	1
Del_8p22	Del_22q13.32	7.48e-06	1
14q-Del	Del_18p11.31	7.48e-23	1
15q-Del	Del_8p23.2	7.49e-07	1
4p-Del	Del_17p12	7.49e-08	1
13q-Amp	14q-Del	7.52e-06	1
BMPR2	LARP4B	7.53e-05	1
MGA	L1TD1	7.54e-06	1
Del_4q22.1	Del_14q31.1	7.54e-06	1
12p-Amp	Amp_12p13.32	7.54e-48	1
13q-Amp	20q-Amp	7.57e-11	1
13q-Amp	16q-Amp	7.58e-05	1
DIP2B	BMPR2	7.58e-08	1
DIP2B	BIRC3	7.5e-05	1
1p-Del	Del_1p13.2	7.5e-17	1
Del_5q22.2	Del_17p12	7.61e-05	1
Amp_20q13.31	Del_14q31.1	7.61e-08	1
1p-Del	Del_1p36.11	7.61e-16	1
CDH1	ROS1	7.63e-05	1
Del_4q35.1	Del_14q11.2	7.63e-05	1
MLH1	NF1	7.63e-06	1
RB1	ATM	7.67e-12	1
Amp_5q22.3	Amp_13q22.1	7.68e-05	1
CHUK	ROS1	7.68e-06	1
4q-Del	Del_22q13.32	7.68e-07	1
Amp_13q22.1	Del_18q22.1	7.68e-12	1
Del_18q22.1	Del_22q13.32	7.68e-14	1
ALPK2	ROS1	7.69e-06	1
PLAGL2	RB1	7.6e-05	1
TP53	18q-Del	7.6e-06	1
MGA	SLC26A8	7.71e-05	1
4p-Del	Del_22q13.32	7.77e-07	1
Del_5q12.1	Del_17p12	7.78e-05	1
Del_4p16.2	Del_8p23.2	7.81e-06	1
Del_8q11.1	Del_15q11.2	7.82e-05	1
20q-Amp	14q-Del	7.85e-09	1
16q-Amp	18q-Del	7.88e-05	1
13q-Amp	Del_14q31.1	7.88e-07	1
OR4D10	PRKDC	7.92e-06	1
Del_14q11.2	Del_18q22.1	7.96e-21	1
Amp_13q12.2	Del_15q11.2	7.97e-07	1
17p-Del	Del_19p13.3	7.98e-08	1
18q-Del	Amp_13q12.13	7.99e-12	1
Del_6q26	Del_18q21.2	7.9e-06	1
15q-Del	Del_4p16.2	7e-07	1
NF1	TOP2B	8.01e-05	1
Amp_13q22.1	Amp_20q11.21	8.01e-16	1
ALPK2	L1TD1	8.02e-08	1
17p-Del	18p-Del	8.04e-32	1
18q-Del	Del_21q11.2	8.06e-10	1
Del_5q21.2	Del_15q11.2	8.08e-05	1
MLH1	NLRC4	8.08e-06	1
ALPK2	PTEN	8.12e-05	1
PRKDC	C11orf30	8.13e-05	1
Amp_20p11.21	Del_8p23.2	8.14e-05	1
Del_8q11.1	Del_18q21.2	8.14e-05	1
Del_4p16.2	Del_18p11.31	8.14e-07	1
Amp_8p11.23	Amp_20q11.21	8.15e-06	1
Amp_20q11.21	Del_1p36.11	8.18e-05	1
Del_10q23.31	Del_22q13.32	8.19e-05	1
Amp_13q22.1	Del_18q12.2	8.19e-12	1
CDH1	NF2	8.19e-13	1
ALPK2	MPHOSPH10	8.1e-05	1
13q-Amp	18q-Del	8.21e-10	1
1p-Del	Del_1p33	8.22e-23	1
Amp_13q22.1	Del_15q11.2	8.23e-05	1
4p-Del	Del_15q21.1	8.23e-06	1
Del_5q21.2	Del_18q21.2	8.23e-06	1
Del_15q15.2	Del_18q22.1	8.25e-22	1
Amp_13q12.2	Del_4q35.1	8.26e-06	1
Del_5q21.2	Del_17p12	8.27e-05	1
RNF43	PTCH1	8.28e-05	1
Del_15q21.1	Del_18q12.2	8.2e-17	1
Del_18q21.2	Del_18q22.1	8.32e-120	1
21q-Del	Del_4q35.1	8.33e-05	1
Del_4q22.1	Del_8p23.2	8.36e-08	1
18q-Del	Del_1p13.2	8.37e-09	1
12p-Amp	2q-Amp	8.38e-05	1
TP53	8p-Del	8.39e-05	1
4q-Del	Del_18q22.1	8.3e-10	1
Del_15q15.2	Del_15q21.1	8.41e-79	1
13q-Amp	Amp_5q22.3	8.42e-05	1
7q-Amp	Amp_13q22.1	8.42e-08	1
Del_15q15.2	Del_18q12.2	8.43e-20	1
FKBP9	CDK12	8.48e-05	1
18p-Del	Amp_20q11.21	8.48e-24	1
Del_18q12.2	Del_18q22.1	8.4e-114	1
NF2	PRKDC	8.51e-05	1
PRKDC	BCL9	8.53e-06	1
Del_4q22.1	Del_15q22.33	8.54e-05	1
Del_3p26.3	Del_14q31.1	8.54e-06	1
Del_12p13.1	Del_18q12.2	8.54e-06	1
Del_4p16.2	Del_18q22.1	8.55e-10	1
Del_14q11.2	Del_17p12	8.57e-17	1
2p-Amp	Amp_17q24.1	8.5e-05	1
NF1	SLC12A6	8.5e-06	1
Amp_20q11.21	Del_15q11.2	8.63e-08	1
18q-Del	Del_14q11.2	8.69e-23	1
Amp_13q22.1	Del_14q31.1	8.72e-09	1
16q-Amp	Amp_16p11.2	8.72e-19	1
Amp_13q22.1	Del_8p23.2	8.73e-08	1
Amp_13q12.13	Del_15q11.2	8.76e-06	1
13q-Amp	Del_17p12	8.82e-07	1
Amp_13q12.2	Amp_20q13.31	8.82e-17	1
8p-Del	Amp_8q24.21	8.83e-06	1
MAPK6	PRRG1	8.85e-05	1
TOP2B	BMPR2	8.87e-05	1
Del_8p22	Del_17p12	8.87e-19	1
Del_15q15.2	Del_22q13.32	8.89e-08	1
RNF43	PRRG1	8.91e-06	1
ST3GAL6	ROS1	8.93e-05	1
Del_14q11.2	Del_18q12.2	8.93e-23	1
BCOR	ZBTB20	8.94e-05	1
BMPR2	CREBBP	8.95e-06	1
NLRC4	PIK3R1	8.97e-05	1
Del_5q12.1	Del_5q21.2	8.97e-19	1
14q-Del	18q-Del	8.98e-21	1
Del_1p36.11	Del_1p13.2	8.9e-13	1
18q-Del	Amp_20q11.21	8.9e-19	1
Amp_5q22.3	Amp_13q12.2	9.01e-06	1
NF1	ROS1	9.02e-08	1
5q-Del	Del_18q22.1	9.04e-05	1
7p-Amp	7q-Amp	9.08e-72	1
Del_5q22.2	Del_18q12.2	9.13e-06	1
4q-Del	Del_18p11.31	9.24e-07	1
ZBTB20	DDX26B	9.28e-07	1
4p-Del	Del_4q22.1	9.33e-23	1
18p-Del	Del_15q22.33	9.36e-16	1
Amp_13q22.1	Del_4q35.1	9.39e-05	1
22q-Del	Del_10q23.31	9.44e-05	1
4p-Del	Del_18q21.2	9.45e-09	1
NF1	C2orf29	9.47e-05	1
18p-Del	Amp_20q12	9.49e-25	1
15q-Del	Del_17p12	9.4e-13	1
HLA-A	ATM	9.54e-08	1
17q-Amp	Amp_17q12	9.58e-21	1
ALPK2	PRRG1	9.62e-05	1
MGA	BMPR2	9.63e-08	1
4q-Del	Del_15q22.33	9.64e-05	1
Del_14q31.1	Del_15q15.2	9.65e-09	1
20q-Amp	Amp_20q12	9.65e-112	1
Del_4q22.1	Del_5q12.1	9.66e-05	1
NF2	PIK3R1	9.67e-07	1
20p-Amp	Amp_8q24.21	9.68e-05	1
Del_15q11.2	Del_15q15.2	9.6e-63	1
20p-Amp	Del_18q21.2	9.71e-05	1
4q-Del	Del_4q22.1	9.72e-35	1
TP53	Amp_20q13.31	9.73e-11	1
Del_18q12.2	Del_21q11.2	9.74e-10	1
Amp_20p11.21	Del_8p22	9.7e-05	1
ARID1A	RPTN	9.81e-05	1
TP53	Del_18p11.31	9.83e-06	1
18q-Del	8p-Del	9.83e-09	1
Del_18p11.31	Del_22q13.32	9.85e-05	1
TPRKB	ATM	9.86e-06	1
Del_4p16.2	Del_8p22	9.87e-06	1
NF2	TOP2B	9.92e-05	1
Amp_20q13.31	Del_15q11.2	9.92e-07	1
17p-Del	Del_18q21.2	9.92e-42	1
Del_4q22.1	Del_4q35.1	9.96e-22	1
7p-Amp	17p-Del	9.98e-05	1
SMAD4	PTEN	9.98e-09	1
18p-Del	Del_10q23.31	9.9e-05	1
ATXN3L	MGA	9e-04	1
12p-Amp	Amp_2q33.1	9e-04	1
4p-Del	Del_8p22	9e-07	1
