# Mutations from non-coordinated clusters only with 3 mutations
"Sample"	"A_T_coord_clusters"	"G_C_coord_clusters"	"Non_coord_clusters"	"clusters"	"mutations"	"complex"	"insertions"	"deletions"	"indels"	"substitutions"	"bases"	"A_to_T"	"A_to_G"	"A_to_C"	"A"	"a"	"T_to_A"	"T_to_C"	"T_to_G"	"T"	"t"	"G_to_C"	"G_to_T"	"G_to_A"	"G"	"g"	"C_to_G"	"C_to_A"	"C_to_T"	"C"	"c"	"tCw_to_G"	"tCw_to_A"	"tCw_to_T"	"tCw"	"tcw"	"tCw_per_mut"	"tCw_per_C"	"tcw_per_c"	"enrich_tCw"	"freq_tCw"	"wGa_to_C"	"wGa_to_T"	"wGa_to_A"	"wGa"	"wga"	"wGa_per_mut"	"wGa_per_G"	"wga_per_g"	"enrich_wGa"	"freq_wGa"	"[tCw_to_G+tCw_to_T]_per_mut"	"tCw_to_G+tCw_to_T"	"[(C_to_G)+(C_to_T)]-[(tCw_to_G)+(tCw_to_T)]"	"tcw+wga"	"c-tcw"	"Fisher_p-value_tCw"	"BH_Fisher_p-value_tCw"	"bonferroni_Fisher_p-value_tCw"	"odds_ratio_tCw"	"95%_confidence_lower_tCw"	"95%_confidence_upper_tCw"	"APOBEC_enrich"	"tCw_to_G_enrich"	"Fisher_p-value_tCw_to_G"	"BH_Fisher_p-value_tCw_to_G"	"bonferroni_Fisher_p-value_tCw_to_G"	"odds_ratio_tCw_to_G"	"tCw_to_T_enrich"	"Fisher_p-value_tCw_to_T"	"BH_Fisher_p-value_tCw_to_T"	"bonferroni_Fisher_p-value_tCw_to_T"	"odds_ratio_tCw_to_T"	"p-value_GvT_skew"	"BH_p-value_GvT_skew"	"bonferroni_p-value_GvT_skew"	"non-APOBEC_mutations"	"non-APOBEC_substitutions"	"APOBEC_MutLoad_MinEstimate"
"TCGA-FA-8693-01A-11D-2397-10"	0	0	2	2	6	2	0	0	0	4	164	0	1	0	1	34	0	0	0	0	36	1	0	2	3	52	0	0	0	0	42	0	0	0	0	4	0	NA	0.0952380952380952	NA	0	0	0	0	0	4	0	0	0.0769230769230769	0	0	0	0	3	8	86	1	1	1	0	0	Inf	0	0	1	1	1	0	0	1	1	1	0	1	1	1	6	4	0
"TCGA-FA-A4BB-01A-11D-A31X-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-FA-A4XK-01A-11D-A31X-10"	0	0	1	1	3	0	0	0	0	3	123	0	1	1	2	43	0	0	0	0	29	0	0	0	0	23	0	0	1	1	28	0	0	0	0	5	0	0	0.178571428571429	0	0	0	0	0	0	4	0	NA	0.173913043478261	NA	0	0	0	1	9	42	1	1	1	0	0	Inf	0	NA	1	1	1	0	0	1	1	1	0	1	1	1	3	3	0
"TCGA-FA-A6HN-01A-11D-A31X-10"	0	0	2	2	6	0	0	0	0	6	246	0	0	0	0	52	0	0	0	0	30	1	0	1	2	82	2	0	2	4	82	0	0	0	0	5	0	0	0.0609756097560976	0	0	1	0	0	1	8	0.166666666666667	0.5	0.0975609756097561	5.125	0.125	0.166666666666667	1	5	13	151	0.40770840154723	1	1	2.30715759829667	0.0927537191859123	Inf	2.1025641025641	4.20512820512821	0.232278925172656	1	1	5.69168440261057	0	1	1	1	0	1	1	1	5	5	0
"TCGA-FA-A6HO-01A-11D-A31X-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-FA-A7DS-01A-11D-A382-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-FA-A7Q1-01A-11D-A382-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-FA-A82F-01A-11D-A382-10"	0	0	2	2	6	1	0	0	0	5	205	0	0	1	1	29	0	1	0	1	33	2	0	0	2	71	0	0	1	1	72	0	0	0	0	4	0	0	0.0555555555555556	0	0	0	0	0	0	5	0	0	0.0704225352112676	0	0	0	0	3	9	134	1	1	1	0	0	Inf	0	0	1	1	1	0	0	1	1	1	0	1	1	1	6	5	0
"TCGA-FA-A86F-01A-11D-A382-10"	0	0	1	1	3	0	0	0	0	3	123	0	0	0	0	26	0	0	0	0	35	0	0	2	2	37	0	0	1	1	25	0	0	0	0	5	0	0	0.2	0	0	0	0	0	0	5	0	0	0.135135135135135	0	0	0	0	3	10	52	1	1	1	0	0	Inf	0	NA	1	1	1	0	0	1	1	1	0	1	1	1	3	3	0
"TCGA-FF-8041-01A-11D-2210-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-FF-8042-01A-11D-2210-10"	0	0	1	1	3	2	0	0	0	1	41	0	1	0	1	18	0	0	0	0	11	0	0	0	0	8	0	0	0	0	4	0	0	0	0	1	0	NA	0.25	NA	0	0	0	0	0	2	0	NA	0.25	NA	0	0	0	0	3	9	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	3	1	0
"TCGA-FF-8043-01A-11D-2210-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-FF-8046-01A-11D-2210-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-FF-8047-01A-11D-2210-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-FF-8061-01A-11D-2210-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-FF-8062-01A-11D-2210-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-FF-A7CQ-01A-11D-A382-10"	0	0	1	1	3	1	0	0	0	2	82	0	0	0	0	13	0	0	0	0	12	0	0	0	0	30	2	0	0	2	27	0	0	0	0	3	0	0	0.111111111111111	0	0	0	0	0	0	2	0	NA	0.0666666666666667	NA	0	0	0	2	5	52	1	1	1	0	0	Inf	0	0	1	1	1	0	NA	1	1	1	0	1	1	1	3	2	0
"TCGA-FF-A7CR-01A-11D-A382-10"	0	0	2	2	6	1	0	0	0	5	205	0	0	0	0	36	0	1	1	2	44	1	1	0	2	74	1	0	0	1	51	0	0	0	0	5	0	0	0.0980392156862745	0	0	0	0	0	0	5	0	0	0.0675675675675676	0	0	0	0	2	10	115	1	1	1	0	0	Inf	0	0	1	1	1	0	NA	1	1	1	0	1	1	1	6	5	0
"TCGA-FF-A7CW-01A-11D-A382-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-FF-A7CX-01A-12D-A382-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-FM-8000-01A-11D-2210-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-G8-6324-01A-11D-2210-10"	0	0	2	2	6	0	0	0	0	6	246	0	0	0	0	64	0	1	0	1	52	0	0	2	2	58	1	0	2	3	72	0	0	0	0	10	0	0	0.138888888888889	0	0	0	0	1	1	9	0.166666666666667	0.5	0.155172413793103	3.22222222222222	0.111111111111111	0.166666666666667	1	4	19	111	0.557323261094481	1	1	1.45590658554645	0.0572962904629021	Inf	1.36842105263158	0	1	1	1	0	1.71052631578947	0.480336002154391	1	1	1.93556667089158	1	1	1	5	5	0
"TCGA-GR-7353-01A-11D-2210-10"	0	0	2	2	6	1	0	0	0	5	205	0	0	1	1	34	0	1	0	1	36	1	0	1	2	60	0	0	1	1	75	0	0	0	0	7	0	0	0.0933333333333333	0	0	0	0	0	0	4	0	0	0.0666666666666667	0	0	0	0	3	11	124	1	1	1	0	0	Inf	0	0	1	1	1	0	0	1	1	1	0	1	1	1	6	5	0
"TCGA-GR-A4D4-01A-11D-A31X-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-GR-A4D5-01A-11D-A31X-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-GR-A4D6-01A-11D-A31X-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-GR-A4D9-01B-11D-A31X-10"	0	0	1	1	3	0	0	0	0	3	123	0	0	0	0	40	1	1	0	2	36	0	0	1	1	26	0	0	0	0	21	0	0	0	0	6	0	NA	0.285714285714286	NA	0	0	0	0	0	4	0	0	0.153846153846154	0	0	0	0	1	10	37	1	1	1	0	0	Inf	0	NA	1	1	1	0	0	1	1	1	0	1	1	1	3	3	0
"TCGA-GS-A9TQ-01A-11D-A382-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-GS-A9TT-01A-11D-A382-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-GS-A9TU-01A-11D-A382-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-GS-A9TV-01A-11D-A382-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-GS-A9TW-01A-11D-A382-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-GS-A9TX-01A-11D-A382-10"	0	0	1	1	3	0	0	0	0	3	123	1	0	0	1	17	0	2	0	2	47	0	0	0	0	26	0	0	0	0	33	0	0	0	0	6	0	NA	0.181818181818182	NA	0	0	0	0	0	2	0	NA	0.0769230769230769	NA	0	0	0	0	8	51	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	3	3	0
"TCGA-GS-A9TY-01A-11D-A38X-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-GS-A9TZ-01A-11D-A38X-10"	0	0	1	1	3	0	0	0	0	3	123	1	0	0	1	26	0	0	0	0	27	0	0	0	0	39	2	0	0	2	31	0	0	0	0	2	0	0	0.0645161290322581	0	0	0	0	0	0	2	0	NA	0.0512820512820513	NA	0	0	0	2	4	66	1	1	1	0	0	Inf	0	0	1	1	1	0	NA	1	1	1	0	1	1	1	3	3	0
"TCGA-GS-A9U3-01A-11D-A38X-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-GS-A9U4-01A-11D-A38X-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"TCGA-RQ-A68N-01A-11D-A31X-10"	0	0	1	1	3	0	0	1	1	2	82	0	0	0	0	19	0	0	0	0	16	1	0	0	1	23	1	0	0	1	24	0	0	0	0	3	0	0	0.125	0	0	0	0	0	0	1	0	0	0.0434782608695652	0	0	0	0	2	4	43	1	1	1	0	0	Inf	0	0	1	1	1	0	NA	1	1	1	0	1	1	1	3	2	0
"TCGA-RQ-A6JB-01A-11D-A31X-10"	0	0	1	1	3	1	0	0	0	2	82	0	0	0	0	9	0	0	0	0	13	1	1	0	2	35	0	0	0	0	25	0	0	0	0	2	0	NA	0.08	NA	0	0	0	0	0	2	0	0	0.0571428571428571	0	0	0	0	1	4	56	1	1	1	0	0	Inf	0	0	1	1	1	0	NA	1	1	1	0	1	1	1	3	2	0
"TCGA-RQ-AAAT-01A-11D-A38X-10"	0	0	2	2	6	0	0	0	0	6	246	1	0	0	1	54	0	0	0	0	40	1	0	3	4	87	0	0	1	1	65	0	0	0	0	4	0	0	0.0615384615384615	0	0	1	0	0	1	7	0.166666666666667	0.25	0.0804597701149425	3.10714285714286	0.142857142857143	0.166666666666667	1	4	11	141	0.331647020838334	1	1	3.16746967348038	0.121381807553559	Inf	2.76363636363636	13.8181818181818	0.0784313725490197	1	1	Inf	0	1	1	1	0	1	1	1	5	5	0
"TCGA-VB-A8QN-01A-11D-A382-10"	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	0	0	0	0	1	1	1	0	0	Inf	NA	NA	1	1	1	0	NA	1	1	1	0	1	1	1	0	0	0
"Totals"	0	0	23	23	69	9	0	1	1	59	2419	3	3	3	9	514	1	7	1	9	497	9	2	12	23	731	9	0	9	18	677	0	0	0	0	72	0	0	0.106351550960118	0	0	2	0	1	3	66	0.0434782608695652	0.130434782608696	0.0902872777017784	1.44466403162055	0.0454545454545455	0.0434782608695652	3	36	138	1270	0.749836955669508	NA	NA	0.767044445446243	0.197853643810139	Inf	0.784838350055741	1.13365539452496	0.540662375430426	NA	NA	1.15023601384525	0.485852311939268	0.88524805824538	NA	NA	0.460329537163571	1	NA	NA	66	56	NA
