gene1	gene2	pval	qval
NIPBL	Del_1p32.3	0.000102	1
22q-Del	9p-Del	0.000105	1
Amp_7q32.3	Del_9p21.3	0.000106	1
NIPBL	Del_1p36.32	0.00011	1
7p-Amp	Amp_3q26.33	0.00011	1
10q-Del	Amp_19p13.3	0.000122	1
Amp_4q12	Del_10q26.3	0.000125	1
18p-Del	Del_1p36.32	0.00013	1
Amp_4q12	Del_9p21.3	0.000136	1
EGFR	22q-Del	0.000141	1
CIC	15q-Del	0.000145	1
Amp_1q32.1	Amp_19p13.2	0.000145	1
Amp_10p15.3	Del_4q34.3	0.000155	1
Amp_1q32.1	Amp_7q31.2	0.000166	1
Amp_4q12	Del_13q14.2	0.00017	1
Amp_Xp11.22	Del_11p15.5	0.000171	1
18p-Del	1p-Del	0.000192	1
Amp_1q32.1	Del_9p21.3	0.000197	1
ATRX	Del_5p15.33	0.000203	1
22q-Del	Del_6q22.31	0.000211	1
Del_9p21.3	Del_13q14.2	0.000215	1
15q-Del	Del_1p32.3	0.000217	1
Amp_1q32.1	Del_10q26.3	0.000222	1
Amp_7q31.2	Del_9p21.3	0.000225	1
Del_3p21.31	Del_3q13.31	0.000226	1
Del_6p25.3	Del_10q26.3	0.00023	1
4p-Del	Del_19q13.41	0.000238	1
RBPJ	Del_4q34.3	0.000239	1
7p-Amp	Amp_1q32.1	0.000242	1
ZBTB20	19q-Del	0.000243	1
19q-Del	4p-Del	0.000243	1
Amp_3q26.33	Amp_7q31.2	0.000245	1
ARID1A	DNMT3A	0.000253	1
PDGFRA	Amp_4q12	0.000253	1
7q-Amp	Amp_1q32.1	0.000256	1
7q-Amp	Amp_12q14.1	0.000256	1
IDH1	Del_11p15.5	0.000264	1
9p-Del	Del_3p21.31	0.000265	1
Amp_12p13.32	Del_22q13.31	0.000273	1
11p-Del	Del_3q29	0.000278	1
6q-Del	9p-Del	0.00028	1
ZBTB20	Del_1p32.3	0.000284	1
ZBTB20	Del_1p36.32	0.000306	1
4p-Del	Del_1p36.32	0.000306	1
Amp_Xp11.22	Del_11p15.1	0.000306	1
Del_11p15.5	Del_13q14.2	0.000306	1
ATRX	12q-Del	0.000313	1
TP53	Del_12q12	0.000339	1
Del_11p15.5	Del_22q13.31	0.000348	1
Amp_1q32.1	Amp_7q32.3	0.000351	1
22q-Del	Del_6q24.3	0.000352	1
9p-Del	Del_14q24.3	0.000354	1
Amp_4q12	Del_4q34.3	0.000375	1
TP53	Del_6q24.3	0.000376	1
IDH1	Amp_8q24.13	0.000407	1
19q-Del	Del_18q23	0.000412	1
4p-Del	Del_19q13.42	0.000412	1
9p-Del	Amp_1q32.1	0.000438	1
Amp_7p11.2	Del_9p23	0.000443	1
Amp_4q12	Del_5q34	0.000449	1
Amp_3q26.33	Amp_7q32.3	0.000454	1
Amp_7q31.2	Amp_19p13.3	0.000456	1
IDH1	Del_1p32.3	0.000459	1
FUBP1	IDH1	0.000461	1
10p-Del	Amp_19p13.3	0.000467	1
Del_1p32.3	Del_18q23	0.000506	1
22q-Del	Del_6p25.3	0.000541	1
4q-Del	Del_1p36.32	0.00056	1
Del_4q34.3	Del_5q34	0.000572	1
10p-Del	Amp_3q26.33	0.000604	1
ZBTB20	1p-Del	0.000632	1
1p-Del	4p-Del	0.000632	1
Amp_1q32.1	Amp_12q14.1	0.000636	1
Amp_7q32.3	Amp_12q14.1	0.000648	1
PIK3R1	Del_19q13.41	0.000652	1
Amp_8q24.13	Amp_Xp11.22	0.00067	1
NF1	22q-Del	0.000677	1
TP53	Del_3q29	0.000703	1
EGFR	14q-Del	0.00071	1
15q-Del	1p-Del	0.000765	1
Amp_12p13.32	Del_3q29	0.000784	1
Amp_12p13.32	Del_5q34	0.000784	1
1p-Del	4q-Del	0.000795	1
Del_6q22.31	Del_10q26.3	0.000806	1
10q-Del	Amp_3q26.33	0.00082	1
PTEN	Amp_19p13.2	0.000852	1
10p-Amp	Del_4q34.3	0.000873	1
Del_6p25.3	Del_22q13.31	0.000878	1
IDH1	Amp_10p15.3	0.000941	1
9p-Del	Del_7p22.3	0.000949	1
NOTCH1	NUDT11	0.000955	1
14q-Del	Del_6p25.3	0.00103	1
8q-Amp	Amp_7q32.3	0.00104	1
Amp_7q32.3	Amp_19p13.3	0.00104	1
7p-Amp	8q-Amp	0.00107	1
7p-Amp	Amp_19p13.3	0.00107	1
PIK3R1	Del_19q13.42	0.0011	1
TP53	Del_Xq21.1	0.00111	1
Amp_4q12	Amp_10p15.3	0.00112	1
Amp_4q12	Amp_12q14.1	0.00112	1
Del_11p15.1	Del_13q14.2	0.00114	1
IDH1	10p-Amp	0.00115	1
PTEN	Del_22q13.31	0.00117	1
18p-Del	Del_19q13.41	0.00117	1
Del_3p21.31	Del_22q13.31	0.00117	1
Amp_13q34	Del_10q26.3	0.00118	1
CIC	4p-Del	0.00125	1
ZBTB20	Del_19q13.41	0.00126	1
TP53	Del_8q24.3	0.00128	1
15q-Del	19q-Del	0.00131	1
Amp_7q31.2	Amp_12q14.1	0.00133	1
Amp_8q24.13	Del_11p15.5	0.00135	1
Del_3q13.31	Del_3q29	0.00135	1
4p-Del	Del_1p32.3	0.00138	1
PTEN	9p-Del	0.00141	1
13q-Del	Del_22q13.31	0.00141	1
TP53	Del_6q22.31	0.00144	1
IDH2	1p-Del	0.00145	1
Del_10q26.3	Del_13q14.2	0.00145	1
19p-Amp	Amp_12q14.1	0.00146	1
9q-Del	Amp_4q12	0.00146	1
Amp_Xp11.22	Del_5p15.33	0.00146	1
IDH1	NOTCH1	0.00148	1
PIK3CA	19q-Del	0.00149	1
11p-Del	Amp_4q12	0.00152	1
15q-Del	Del_1p36.32	0.00155	1
Del_6p25.3	Del_9p21.3	0.00155	1
9p-Del	Amp_7p11.2	0.00156	1
19q-Del	4q-Del	0.00165	1
Del_5q34	Del_13q14.2	0.00165	1
ATRX	Amp_Xp11.22	0.00168	1
PTEN	RB1	0.00168	1
1p-Del	Del_18q23	0.00169	1
PPL	RBBP6	0.0017	1
PIK3CA	1p-Del	0.00171	1
Del_1p36.32	Del_18q23	0.00174	1
Amp_7q32.3	Amp_8q24.13	0.00179	1
EGFR	Del_9p23	0.0018	1
Amp_13q34	Del_11p15.1	0.00181	1
CIC	4q-Del	0.00187	1
Amp_7p11.2	Amp_19p13.3	0.00188	1
NIPBL	Del_19q13.41	0.00189	1
NF1	Del_22q13.31	0.00191	1
6q-Del	Del_22q13.31	0.00191	1
Del_6q24.3	Del_10q26.3	0.00191	1
4q-Del	Del_1p32.3	0.00193	1
ATRX	8q-Amp	0.00196	1
8q-Amp	Amp_7q31.2	0.00201	1
SRPX	Amp_1q22	0.00204	1
ZBTB20	Del_19q13.42	0.00205	1
Amp_8q24.13	Del_5p15.33	0.00206	1
18p-Del	Del_19q13.42	0.00207	1
Del_14q24.3	Del_22q13.31	0.0021	1
NF1	Del_6p25.3	0.00211	1
FUBP1	PIK3R1	0.00212	1
10p-Amp	Del_5q34	0.00213	1
22q-Del	Del_3q29	0.00213	1
EGFR	9p-Del	0.00217	1
NF1	14q-Del	0.00227	1
Del_3q29	Del_8q24.3	0.00233	1
RB1	RET	0.00236	1
Del_3q29	Del_22q13.31	0.00237	1
Del_5p15.33	Del_9p23	0.00237	1
NF1	Del_9p21.3	0.00238	1
Amp_3q26.33	Del_10q26.3	0.00239	1
11p-Del	Del_2q37.3	0.0024	1
22q-Del	Del_11p15.5	0.00243	1
13q-Del	Del_4q34.3	0.00245	1
13q-Del	Del_10q26.3	0.00246	1
IDH1	Amp_12p13.32	0.0025	1
Del_3p21.31	Del_9p21.3	0.0025	1
Del_5p15.33	Del_9p21.3	0.0025	1
IDH2	19q-Del	0.0026	1
Amp_19p13.3	Del_10q26.3	0.00266	1
22q-Del	Amp_7p11.2	0.00267	1
Amp_1q32.1	Del_9p23	0.00269	1
SLC6A3	ZNF512B	0.0027	1
15q-Del	Del_19q13.41	0.00277	1
EGFR	Del_22q13.31	0.00288	1
NIPBL	Del_19q13.42	0.00291	1
11p-Del	Amp_10p15.3	0.00292	1
IDH2	Del_1p32.3	0.00295	1
Amp_12p13.32	Del_2q37.3	0.00301	1
IDH2	Del_1p36.32	0.00313	1
ARID1A	ZMIZ1	0.00321	1
Amp_1q22	Amp_1q32.1	0.00321	1
Amp_10p15.3	Del_8q24.3	0.00328	1
BRAF	STK19	0.00336	1
HTRA2	STK19	0.00336	1
STK19	Amp_7q31.2	0.00356	1
6q-Del	Del_10q26.3	0.00357	1
Amp_10p15.3	Del_11p15.1	0.00362	1
10p-Amp	Amp_8q24.13	0.00368	1
EGFR	Amp_12q14.1	0.00369	1
PTEN	7p-Amp	0.00372	1
9p-Del	Amp_12p13.32	0.00372	1
Del_7p22.3	Del_9p23	0.00389	1
Amp_17q25.1	Del_2q37.3	0.004	1
PLXNA3	PPL	0.00401	1
PLXNA3	RB1	0.00401	1
RBBP6	ZMIZ1	0.00401	1
Del_6p25.3	Del_8q24.3	0.00401	1
Amp_8q24.13	Amp_12p13.32	0.00402	1
15q-Del	Del_19q13.42	0.00406	1
HTRA2	Del_7p22.3	0.00409	1
Del_9p23	Del_13q14.2	0.00413	1
7q-Amp	Amp_8q24.13	0.00421	1
Del_3p21.31	Del_11p15.1	0.00422	1
Amp_10p15.3	Del_3p21.31	0.00429	1
CIC	PIK3CA	0.00431	1
NF1	RB1	0.00433	1
Amp_4q12	Amp_12p13.32	0.00438	1
NF1	10p-Del	0.00444	1
10p-Del	6q-Del	0.00444	1
Amp_10p15.3	Amp_12p13.32	0.00445	1
NIPBL	4p-Del	0.00448	1
Amp_7q31.2	Amp_8q24.13	0.00448	1
Amp_4q12	Del_3q29	0.00458	1
CIB1	Del_4q34.3	0.00465	1
9p-Del	Del_6p25.3	0.00466	1
PIK3CA	Del_1p32.3	0.0048	1
13q-Del	Amp_4q12	0.0048	1
AGBL1	19p-Amp	0.00489	1
CUL4B	PPL	0.00499	1
CUL4B	TRERF1	0.00499	1
MYT1	PRX	0.00499	1
SCN4A	STK19	0.00499	1
Del_4q34.3	Del_11p15.5	0.00504	1
PTEN	22q-Del	0.00506	1
10p-Amp	Del_3p21.31	0.00506	1
PIK3CA	Del_1p36.32	0.00524	1
Amp_4q12	Del_11p15.5	0.00524	1
PTEN	Amp_7q31.2	0.00533	1
Amp_4q12	Del_11p15.1	0.00535	1
PTEN	7q-Amp	0.00545	1
CIC	NIPBL	0.00547	1
IDH1	Del_2q37.3	0.00553	1
IRS4	SLC6A3	0.00556	1
IRS4	ZMIZ1	0.00556	1
STK19	Amp_7q32.3	0.00556	1
Del_6q22.31	Del_22q13.31	0.0056	1
19p-Amp	Amp_1q32.1	0.00564	1
Xp-Del	Del_6q22.31	0.00568	1
CIC	CREBZF	0.00573	1
9p-Del	Amp_4q12	0.00574	1
CREBZF	19q-Del	0.00589	1
MYST4	RBBP6	0.00606	1
NUDT11	RBBP6	0.00606	1
TP53	Amp_2p24.3	0.00615	1
10p-Amp	Del_8q24.3	0.00639	1
HTRA2	Del_6q22.31	0.00645	1
ARID1A	Del_1p36.32	0.00647	1
Del_11p15.1	Del_22q13.31	0.00651	1
NF1	10q-Del	0.00653	1
7p-Amp	Amp_8q24.13	0.00653	1
10q-Del	6q-Del	0.00653	1
4q-Del	9q-Del	0.00656	1
Del_6p25.3	Del_9p23	0.00662	1
TP53	Del_3p21.31	0.00675	1
Amp_13q34	Del_11p15.5	0.00677	1
Del_2q37.3	Del_10q26.3	0.00685	1
6q-Del	Del_Xq21.1	0.00689	1
DNMT3A	IRS4	0.00691	1
IRS4	PRX	0.00691	1
STK19	Amp_2p24.3	0.00691	1
10p-Amp	Del_11p15.1	0.00691	1
Amp_17q25.1	Del_7p22.3	0.00698	1
Xp-Del	Del_6q24.3	0.00715	1
MYST4	19q-Del	0.00724	1
Amp_13q34	Del_13q14.2	0.00726	1
9p-Del	Amp_7q32.3	0.00739	1
Amp_12q14.1	Amp_19p13.2	0.00744	1
IDH1	Del_11p15.1	0.00746	1
7q-Amp	8q-Amp	0.00746	1
7q-Amp	Del_9p23	0.00752	1
CIB1	Amp_4q12	0.00756	1
13q-Del	Del_11p15.1	0.00756	1
RB1	14q-Del	0.0076	1
HTRA2	Del_6q24.3	0.00772	1
9p-Del	Del_5q34	0.00794	1
Del_3q29	Del_13q14.2	0.00794	1
Del_14q24.3	Del_19q13.41	0.00802	1
13q-Del	Del_11p15.5	0.00813	1
IDH1	Del_12q12	0.00819	1
MYST4	Del_1p36.32	0.00819	1
Del_18q23	Del_19q13.41	0.00834	1
ARID2	RBPJ	0.00839	1
ARID2	RET	0.00839	1
Amp_12p13.32	Del_9p23	0.00839	1
Amp_7p11.2	Del_22q13.31	0.00848	1
Xq-Del	Del_Xq21.1	0.00851	1
ARID1A	CIC	0.00856	1
13q-Del	Del_9p21.3	0.00858	1
MYST4	NOTCH1	0.00861	1
Del_4q34.3	Del_Xq21.1	0.00866	1
Del_6q24.3	Del_22q13.31	0.00866	1
10p-Amp	11p-Del	0.00871	1
PRX	PTEN	0.00886	1
ATRX	Amp_10p15.3	0.00906	1
PTEN	Del_9p23	0.00917	1
9q-Del	Del_8q24.3	0.00918	1
10q-Del	13q-Del	0.00922	1
CIB1	4p-Del	0.00923	1
PLXNA3	ZMIZ1	0.00936	1
IDH2	Del_19q13.41	0.00937	1
Del_3q29	Del_6p25.3	0.00944	1
Del_4q34.3	Del_11p15.1	0.00949	1
13q-Del	4q-Del	0.00952	1
STK19	7q-Amp	0.00997	1
MYT1	PIK3CA	0.00999	1
PTEN	Amp_7q32.3	0.01	1
PTPN11	Amp_3q26.33	0.01	1
Del_3p21.31	Del_4q34.3	0.0103	1
TP53	Amp_11q24.1	0.0105	1
7q-Amp	9p-Del	0.0106	1
14q-Del	Amp_7p11.2	0.0106	1
4p-Del	Del_13q14.2	0.0107	1
Del_2q37.3	Del_3p21.31	0.0107	1
10p-Amp	Del_13q14.2	0.0108	1
9q-Del	Amp_1q32.1	0.0109	1
Del_3p21.31	Del_3q29	0.011	1
Del_5p15.33	Del_5q34	0.011	1
AGBL1	Amp_19p13.2	0.0111	1
DDX5	FAM47C	0.0111	1
FAM47C	ZNF512B	0.0111	1
PRX	18q-Del	0.0111	1
Del_9p21.3	Del_11p15.1	0.0111	1
Amp_7q32.3	Del_9p23	0.0112	1
CUL4B	PLXNA3	0.0116	1
DNMT3A	TNRC18	0.0116	1
DNMT3A	ZMIZ1	0.0116	1
DNMT3A	Xp-Del	0.0116	1
PDGFRA	SLC6A3	0.0116	1
PLXNA3	SETD2	0.0116	1
PRX	ZMIZ1	0.0116	1
SMOC1	6q-Del	0.0117	1
Amp_12q14.1	Amp_13q34	0.0118	1
Amp_13q34	Del_3p21.31	0.0118	1
ARID1A	1p-Del	0.0121	1
FUBP1	SCN4A	0.0121	1
RB1	13q-Del	0.0121	1
Xq-Del	Del_6q22.31	0.0121	1
10p-Amp	Amp_4q12	0.0122	1
4q-Del	Del_19q13.41	0.0122	1
ARID1A	ZNF512B	0.0123	1
ATRX	Del_5q34	0.0124	1
RET	14q-Del	0.0126	1
Amp_12p13.32	Del_3p21.31	0.0127	1
MYT1	TP53	0.0128	1
8q-Amp	Del_3q29	0.0128	1
10q-Del	Amp_4q12	0.0128	1
Amp_19p13.3	Del_9p21.3	0.0128	1
Del_6q22.31	Del_7p22.3	0.0129	1
FUBP1	PIK3CA	0.013	1
10p-Amp	Del_10q26.3	0.0131	1
8q-Amp	Del_2q37.3	0.0132	1
Del_4q34.3	Del_9p21.3	0.0136	1
IDH2	Del_19q13.42	0.0138	1
PRX	18p-Del	0.0138	1
ARID2	TNRC18	0.014	1
MYST4	PLXNA3	0.014	1
MYST4	SLC6A3	0.014	1
MYST4	ZMIZ1	0.014	1
NUDT11	SLC6A3	0.014	1
ATRX	Amp_2p24.3	0.0141	1
CUL4B	PRX	0.0143	1
DNMT3A	PRX	0.0143	1
PRX	SETD2	0.0143	1
TP53	Amp_Xp11.22	0.0143	1
CREBZF	NOTCH1	0.0144	1
NF1	6q-Del	0.0144	1
Xq-Del	Del_6q24.3	0.0144	1
CIC	MYST4	0.0145	1
Del_18q23	Del_19q13.42	0.0145	1
NUDT11	SMARCA4	0.0148	1
10p-Amp	Del_7p22.3	0.0148	1
Amp_12p13.32	Del_9p21.3	0.0149	1
IDH1	11p-Del	0.0151	1
IDH2	Del_4q34.3	0.0153	1
NF1	Del_14q24.3	0.0153	1
PTEN	19p-Amp	0.0153	1
PTEN	Amp_3q26.33	0.0153	1
Amp_3q26.33	Del_3p21.31	0.0153	1
Del_3q29	Del_4q34.3	0.0153	1
11p-Del	Del_4q34.3	0.0156	1
6q-Del	Xp-Del	0.0159	1
4q-Del	Amp_4q12	0.016	1
MYST4	7q-Amp	0.0161	1
10p-Amp	Del_2q37.3	0.0161	1
Del_6q24.3	Del_7p22.3	0.0161	1
PIK3R1	1p-Del	0.0162	1
CIB1	4q-Del	0.0163	1
CREBZF	PIK3CA	0.0164	1
13q-Del	Del_3p21.31	0.0166	1
13q-Del	Del_5p15.33	0.0166	1
9q-Del	Del_4q34.3	0.017	1
Del_6p25.3	Del_Xq21.1	0.0171	1
ARID2	DNMT3A	0.0173	1
ARID2	PDGFRA	0.0173	1
NUDT11	PRX	0.0173	1
NUDT11	SETD2	0.0173	1
4q-Del	Del_13q14.2	0.0173	1
ARID1A	PIK3CA	0.0177	1
Del_14q24.3	Del_19q13.42	0.0177	1
RB1	10p-Del	0.0179	1
10p-Del	Del_6q22.31	0.0179	1
Del_2q37.3	Del_Xq21.1	0.0179	1
10p-Amp	Del_9p21.3	0.018	1
ARID1A	11q-Amp	0.0181	1
Amp_4q12	Del_8q24.3	0.0181	1
Amp_11q24.1	Amp_13q34	0.0182	1
10q-Del	Del_13q14.2	0.0183	1
11p-Del	Del_22q13.31	0.0189	1
4q-Del	Del_19q13.42	0.0189	1
10p-Amp	Amp_Xp11.22	0.0191	1
EGFR	NF1	0.0192	1
4q-Del	Del_3q29	0.0192	1
4q-Del	Del_5q34	0.0192	1
Amp_11q24.1	Del_3q29	0.0192	1
14q-Del	Del_9p23	0.0194	1
BRAF	PTEN	0.0195	1
Xp-Del	Del_Xq21.1	0.0195	1
ANKRD36	Del_6q22.31	0.0198	1
CREBZF	FUBP1	0.0198	1
PPL	Del_3q29	0.02	1
CIC	RBBP6	0.0202	1
CIC	SCN4A	0.0202	1
STK19	19p-Amp	0.0206	1
14q-Del	9p-Del	0.0207	1
Del_5q34	Del_9p21.3	0.0207	1
Del_7p22.3	Del_9p21.3	0.0207	1
RB1	10q-Del	0.0208	1
ARID1A	Del_1p32.3	0.0209	1
MYST4	NUDT11	0.0209	1
11q-Amp	Amp_17q25.1	0.0209	1
Amp_10p15.3	Del_5p15.33	0.021	1
Del_3q13.31	Del_6p25.3	0.0211	1
TP53	Del_3q13.31	0.0212	1
Amp_19p13.3	Del_6p25.3	0.0212	1
Amp_1q32.1	Amp_4q12	0.0214	1
DNMT3A	NF1	0.0217	1
NF1	SETD2	0.0217	1
Del_3q13.31	Del_11p15.5	0.0217	1
GAGE2A	NOTCH1	0.0218	1
PPL	ZBTB20	0.0219	1
11p-Del	Del_6p25.3	0.0219	1
PIK3CA	Del_19q13.42	0.0221	1
EGFR	Amp_19p13.3	0.0222	1
8q-Amp	Del_11p15.1	0.0224	1
PIK3R1	15q-Del	0.0227	1
SMARCA4	ZNF512B	0.0228	1
9p-Del	Del_3q13.31	0.0231	1
Amp_11q24.1	Del_2q37.3	0.0231	1
ARID1A	13q-Del	0.0232	1
9p-Del	Del_5p15.33	0.0232	1
Del_5p15.33	Del_13q14.2	0.0232	1
ANKRD36	Del_6q24.3	0.0234	1
CIB1	TMEM216	0.0234	1
IRS4	Del_6q24.3	0.0234	1
EGFR	Del_14q24.3	0.0235	1
SMOC1	Del_6q22.31	0.0235	1
CREBZF	Del_19q13.41	0.0237	1
12q-Del	Del_3p21.31	0.0237	1
NF1	Del_6q22.31	0.0239	1
Amp_4q12	Del_9p23	0.024	1
DNMT3A	Del_Xq21.1	0.0241	1
TP53	6q-Del	0.0243	1
PDGFRA	Del_10q26.3	0.0244	1
Del_6q22.31	Del_Xq21.1	0.0244	1
SMARCA4	TP53	0.0245	1
4q-Del	Amp_12p13.32	0.0245	1
Amp_12q14.1	Amp_19p13.3	0.0245	1
MYST4	1p-Del	0.0246	1
10p-Amp	13q-Del	0.0246	1
ARID1A	IRS4	0.0247	1
18p-Del	Del_4q34.3	0.0247	1
8q-Amp	Amp_10p15.3	0.0249	1
11p-Del	Del_8q24.3	0.0249	1
8q-Amp	Amp_7p11.2	0.025	1
ARID1A	NIPBL	0.0251	1
EGFR	SRPX	0.0252	1
ZMIZ1	Del_18q23	0.0252	1
TP53	Amp_13q34	0.0254	1
CUL4B	EGFR	0.0255	1
EGFR	SETD2	0.0255	1
9q-Del	Xp-Del	0.0258	1
10p-Del	Del_6p25.3	0.0259	1
10q-Del	Del_6q22.31	0.0259	1
11p-Del	Del_3p21.31	0.0262	1
SMOC1	Del_6q24.3	0.0265	1
8q-Amp	Del_11p15.5	0.0268	1
PIK3CA	ZBTB20	0.0271	1
22q-Del	Del_11p15.1	0.0271	1
IDH2	RBPJ	0.0273	1
NOTCH1	PIK3R1	0.0273	1
10p-Del	Del_6q24.3	0.0274	1
IDH1	12q-Del	0.0275	1
PIK3CA	Del_19q13.41	0.0275	1
NOTCH1	TCF12	0.0279	1
7p-Amp	9p-Del	0.028	1
Amp_10p15.3	Del_13q14.2	0.0282	1
PIK3R1	Del_1p32.3	0.0283	1
IDH2	NIPBL	0.0289	1
PTPN11	10p-Del	0.0289	1
13q-Del	Del_3q29	0.0289	1
13q-Del	Del_5q34	0.0289	1
CREBZF	Del_19q13.42	0.029	1
9p-Del	Amp_19p13.3	0.029	1
Del_7p22.3	Del_Xq21.1	0.029	1
HTRA2	TMEM216	0.0292	1
Xp-Del	Del_8q24.3	0.0292	1
Amp_11q24.1	Del_Xq21.1	0.0293	1
19p-Amp	Amp_3q26.33	0.0294	1
ZNF709	11p-Del	0.0295	1
NF1	Del_10q26.3	0.0296	1
PIK3R1	Del_1p36.32	0.0297	1
RB1	Del_13q14.2	0.0298	1
13q-Del	Del_9p23	0.0298	1
9p-Del	Amp_7q31.2	0.0299	1
IRS4	ZBTB20	0.03	1
RET	ZBTB20	0.03	1
Amp_1q22	Amp_7q32.3	0.0301	1
Del_6q24.3	Del_Xq21.1	0.0301	1
MYST4	7p-Amp	0.0303	1
7p-Amp	Amp_13q34	0.0303	1
IDH1	4q-Del	0.0304	1
NOTCH1	SLC6A3	0.0308	1
Amp_8q24.13	Del_2q37.3	0.0308	1
8q-Amp	11p-Del	0.0309	1
9p-Del	Del_3q29	0.031	1
KRT3	ZNF709	0.0311	1
Amp_2p24.3	Amp_7q32.3	0.0312	1
Amp_7q31.2	Del_9p23	0.0312	1
Del_3p21.31	Del_12q12	0.0319	1
Del_5p15.33	Del_12q12	0.0319	1
CREBZF	1p-Del	0.0321	1
PTEN	14q-Del	0.0321	1
RBPJ	1p-Del	0.0321	1
Del_3q29	Del_9p23	0.0321	1
Del_5q34	Del_9p23	0.0321	1
Amp_7q31.2	Del_2q37.3	0.0322	1
ATRX	TRERF1	0.0326	1
Amp_7q32.3	Amp_11q24.1	0.0326	1
NF1	Del_6q24.3	0.0329	1
19p-Amp	Del_9p23	0.0329	1
MYT1	SMARCA4	0.0331	1
MYT1	10p-Amp	0.0331	1
PPL	SMARCA4	0.0331	1
RB1	22q-Del	0.0331	1
10q-Del	Del_6p25.3	0.0332	1
EGFR	Amp_13q34	0.0334	1
TP53	Del_13q14.2	0.0334	1
12q-Del	Amp_13q34	0.0334	1
MYST4	Amp_7q31.2	0.0335	1
PTPN11	10q-Del	0.0335	1
Amp_3q26.33	Del_9p21.3	0.0337	1
Del_2q37.3	Del_6q22.31	0.0337	1
9p-Del	Del_2q37.3	0.034	1
PRX	Del_18q23	0.0341	1
Del_5p15.33	Del_8q24.3	0.0343	1
Del_2q37.3	Del_4q34.3	0.0344	1
PIK3CA	SLC6A3	0.0349	1
KRAS	PLXNA3	0.035	1
KRAS	ZMIZ1	0.035	1
13q-Del	4p-Del	0.0353	1
Del_9p23	Del_11p15.1	0.0354	1
15q-Del	18q-Del	0.0356	1
11p-Del	Del_10q26.3	0.0357	1
MYST4	Del_1p32.3	0.0358	1
BRAF	NF1	0.0359	1
HTRA2	6q-Del	0.0359	1
Amp_10p15.3	Del_7p22.3	0.036	1
Del_2q37.3	Del_6p25.3	0.036	1
4q-Del	Del_3p21.31	0.0361	1
FAM47C	SLC6A3	0.0366	1
NIPBL	ZMIZ1	0.0366	1
SMARCA4	10p-Amp	0.0368	1
ZMIZ1	19q-Del	0.0376	1
13q-Del	Amp_10p15.3	0.0376	1
MYST4	Del_19q13.41	0.038	1
RBBP6	4q-Del	0.038	1
Amp_19p13.3	Del_9p23	0.038	1
PTPN11	7p-Amp	0.0384	1
ANKRD36	Del_3p21.31	0.0386	1
PTEN	PTPN11	0.0386	1
PTEN	RET	0.0386	1
Del_8q24.3	Del_11p15.5	0.0387	1
CIB1	HTRA2	0.0388	1
10q-Del	Del_6q24.3	0.039	1
4q-Del	Amp_10p15.3	0.0393	1
11p-Del	Del_13q14.2	0.0395	1
NUDT11	Del_13q14.2	0.0397	1
IDH1	Del_5q34	0.04	1
AGBL1	EGFR	0.0402	1
GAGE2A	Amp_7q31.2	0.0402	1
11p-Del	Amp_8q24.13	0.0403	1
10p-Del	Amp_4q12	0.0404	1
CIC	IDH2	0.0406	1
RBPJ	TMEM216	0.0407	1
RBPJ	19q-Del	0.0409	1
9p-Del	Del_8q24.3	0.0411	1
Del_6p25.3	Del_14q24.3	0.0411	1
DNMT3A	NOTCH1	0.0415	1
FUBP1	SLC6A3	0.0415	1
ANKRD36	8q-Amp	0.0417	1
Amp_10p15.3	Del_9p21.3	0.0422	1
11q-Amp	18q-Del	0.0423	1
GAGE2A	PIK3R1	0.0425	1
KRAS	MYST4	0.0427	1
CREBZF	Del_1p32.3	0.043	1
RBPJ	Del_1p32.3	0.043	1
15q-Del	18p-Del	0.0433	1
Del_12q12	Del_13q14.2	0.0435	1
CREBZF	Del_1p36.32	0.0441	1
RBPJ	Del_1p36.32	0.0441	1
FUBP1	NAP1L2	0.0443	1
FUBP1	SRPX	0.0443	1
FUBP1	ZNF709	0.0443	1
MYST4	Del_18q23	0.0444	1
CUL4B	Amp_19p13.2	0.0448	1
RET	22q-Del	0.0448	1
SMARCA4	Del_1q43	0.0448	1
STK19	Amp_19p13.2	0.0448	1
Amp_1q32.1	Amp_19p13.3	0.0449	1
Amp_10p15.3	Del_5q34	0.0449	1
GAGE2A	Amp_8q24.13	0.045	1
8q-Amp	Del_4q34.3	0.0451	1
IDH1	SMARCA4	0.0452	1
RB1	Del_14q24.3	0.0455	1
ZNF709	Del_11p15.1	0.0461	1
IDH1	Amp_Xp11.22	0.0462	1
ATRX	Del_12q12	0.0463	1
Del_10q26.3	Del_11p15.1	0.0464	1
MYST4	Amp_7q32.3	0.0467	1
Amp_7q32.3	Amp_13q34	0.0467	1
PDGFRA	PIK3CA	0.0468	1
10p-Amp	4q-Del	0.047	1
10p-Del	13q-Del	0.0471	1
PRX	Del_14q24.3	0.0472	1
MYST4	Del_19q13.42	0.0479	1
Del_8q24.3	Del_9p21.3	0.048	1
7p-Amp	Del_9p23	0.0482	1
BRAF	DDX5	0.0483	1
BRAF	ZNF512B	0.0483	1
DDX5	ZNF512B	0.0483	1
AGBL1	Del_10q26.3	0.0484	1
4q-Del	Del_11p15.5	0.0484	1
RB1	Amp_7p11.2	0.0488	1
TNRC18	ZBTB20	0.0489	1
ZBTB20	ZMIZ1	0.0489	1
NF1	Amp_7p11.2	0.049	1
Amp_4q12	Del_22q13.31	0.049	1
11p-Del	13q-Del	0.0491	1
ARID1A	PRX	0.0495	1
SMARCA4	Amp_8q24.13	0.0498	1
Amp_7q31.2	Amp_11q24.1	0.0502	1
ANKRD36	Del_9p21.3	0.0504	1
12q-Del	Amp_12p13.32	0.0509	1
Del_3p21.31	Del_14q24.3	0.0511	1
Del_4q34.3	Del_18q23	0.0511	1
CREBZF	4q-Del	0.0515	1
MYT1	NF1	0.0517	1
NF1	RBBP6	0.0517	1
6q-Del	Xq-Del	0.0517	1
9p-Del	Del_13q14.2	0.0519	1
FAM47C	NOTCH1	0.052	1
4q-Del	9p-Del	0.0522	1
IRS4	TP53	0.0528	1
12q-Del	Del_3q13.31	0.0528	1
GAGE2A	Amp_7q32.3	0.0531	1
PIK3R1	ZMIZ1	0.0532	1
Amp_8q24.13	Amp_17q25.1	0.0532	1
Amp_8q24.13	Del_5q34	0.0532	1
FAM47C	MYST4	0.0536	1
FAM47C	NUDT11	0.0536	1
NIPBL	NUDT11	0.0536	1
NOTCH1	Del_7p22.3	0.0538	1
CIB1	RBPJ	0.0539	1
NAP1L2	RBPJ	0.0539	1
19p-Amp	9p-Del	0.0539	1
PTEN	Amp_4q12	0.054	1
Amp_4q12	Del_5p15.33	0.054	1
Del_8q24.3	Del_11p15.1	0.054	1
ARID1A	19q-Del	0.0544	1
Del_6p25.3	Del_11p15.1	0.0548	1
Del_5q34	Del_6p25.3	0.0553	1
Del_6p25.3	Del_11p15.5	0.0553	1
DNMT3A	FUBP1	0.0555	1
TP53	Del_9p23	0.056	1
Del_4q34.3	Del_9p23	0.056	1
19p-Amp	Del_22q13.31	0.0562	1
DDX5	NOTCH1	0.0565	1
NOTCH1	ROBO3	0.0565	1
Amp_10p15.3	Del_Xq21.1	0.0566	1
Amp_1q32.1	Amp_3q26.33	0.0567	1
Amp_13q34	Del_2q37.3	0.0572	1
Del_2q37.3	Del_7p22.3	0.0572	1
SRPX	10p-Del	0.0575	1
BRAF	MYT1	0.0577	1
BRAF	PPL	0.0577	1
BRAF	RB1	0.0577	1
BRAF	RBBP6	0.0577	1
BRAF	SCN4A	0.0577	1
BRAF	TRERF1	0.0577	1
DDX5	MYT1	0.0577	1
DDX5	PPL	0.0577	1
DDX5	RB1	0.0577	1
DDX5	RBBP6	0.0577	1
DDX5	SCN4A	0.0577	1
DDX5	TRERF1	0.0577	1
EGFR	RB1	0.0577	1
EGFR	TRERF1	0.0577	1
HTRA2	Xq-Del	0.0577	1
MYT1	ZNF512B	0.0577	1
PPL	ZNF512B	0.0577	1
RB1	ZNF512B	0.0577	1
RBBP6	ZNF512B	0.0577	1
ROBO3	SCN4A	0.0577	1
SCN4A	ZNF512B	0.0577	1
TRERF1	ZNF512B	0.0577	1
STK19	TMEM216	0.0578	1
Xp-Del	Del_6p25.3	0.0578	1
NOTCH1	PIK3CA	0.0579	1
Del_5q34	Del_22q13.31	0.058	1
TP53	Amp_3q26.33	0.0584	1
Amp_1q22	Del_11p15.1	0.0586	1
Amp_19p13.2	Del_9p23	0.0588	1
ZNF512B	Del_2q37.3	0.059	1
Amp_8q24.13	Del_11p15.1	0.059	1
Del_6p25.3	Del_13q14.2	0.0591	1
SMOC1	Del_14q24.3	0.0595	1
CUL4B	ZBTB20	0.0596	1
DNMT3A	ZBTB20	0.0596	1
PDGFRA	ZBTB20	0.0596	1
PRX	ZBTB20	0.0596	1
PTEN	13q-Del	0.0596	1
13q-Del	Amp_12q14.1	0.0596	1
18p-Del	4q-Del	0.0596	1
13q-Del	9p-Del	0.0598	1
8q-Amp	Amp_4q12	0.0599	1
14q-Del	Amp_3q26.33	0.0599	1
9q-Del	Del_3q13.31	0.0599	1
Amp_17q25.1	Del_9p21.3	0.0599	1
Del_3q29	Del_9p21.3	0.0599	1
Del_8q24.3	Del_10q26.3	0.0606	1
Del_9p21.3	Del_11p15.5	0.0606	1
MYT1	Amp_10p15.3	0.0607	1
Xq-Del	Amp_10p15.3	0.0607	1
PTEN	6q-Del	0.0614	1
Del_6q24.3	Del_8q24.3	0.0614	1
Amp_12q14.1	Del_3q29	0.0616	1
Amp_12q14.1	Del_5q34	0.0616	1
KRAS	11q-Amp	0.0618	1
Del_3p21.31	Del_10q26.3	0.0618	1
Del_5p15.33	Del_10q26.3	0.0618	1
Del_3q29	Del_10q26.3	0.0622	1
Del_5q34	Del_10q26.3	0.0622	1
PLXNA3	Amp_7q31.2	0.0624	1
PTEN	TNRC18	0.0624	1
ZMIZ1	Amp_7q31.2	0.0624	1
Amp_3q26.33	Amp_19p13.2	0.063	1
10p-Del	9q-Del	0.0633	1
Del_3q13.31	Del_9p23	0.0634	1
CIC	FAM47C	0.0636	1
SRPX	10q-Del	0.0636	1
11p-Del	Del_9p21.3	0.0645	1
DNMT3A	PIK3R1	0.0648	1
PIK3R1	PRX	0.0648	1
10p-Del	Del_13q14.2	0.0648	1
NUDT11	Del_3q29	0.065	1
Amp_13q34	Del_3q29	0.065	1
ANKRD36	Amp_12p13.32	0.0657	1
Amp_2p24.3	Amp_12p13.32	0.0657	1
PIK3R1	19q-Del	0.0658	1
9p-Del	Amp_19p13.2	0.0658	1
Del_7p22.3	Del_14q24.3	0.0659	1
22q-Del	Amp_4q12	0.0661	1
IDH1	Del_5p15.33	0.0664	1
GAGE2A	Del_11p15.5	0.0665	1
AGBL1	RBPJ	0.067	1
ANKRD36	ZNF512B	0.067	1
BRAF	IRS4	0.067	1
BRAF	RET	0.067	1
DDX5	IRS4	0.067	1
DDX5	RET	0.067	1
HTRA2	RBPJ	0.067	1
IRS4	ROBO3	0.067	1
IRS4	ZNF512B	0.067	1
RET	ZNF512B	0.067	1
ROBO3	Amp_2p24.3	0.067	1
ZNF512B	Amp_2p24.3	0.067	1
Del_3q13.31	Del_8q24.3	0.0674	1
Del_10q26.3	Del_11p15.5	0.0675	1
ZBTB20	Del_18q23	0.0677	1
9p-Del	Del_11p15.1	0.0679	1
8q-Amp	Amp_17q25.1	0.0682	1
MYT1	PPL	0.0689	1
MYT1	RB1	0.0689	1
MYT1	RBBP6	0.0689	1
MYT1	SCN4A	0.0689	1
MYT1	TRERF1	0.0689	1
PPL	RB1	0.0689	1
PPL	SCN4A	0.0689	1
PPL	TRERF1	0.0689	1
RB1	RBBP6	0.0689	1
RB1	SCN4A	0.0689	1
RB1	TRERF1	0.0689	1
RBBP6	SCN4A	0.0689	1
RBBP6	TRERF1	0.0689	1
SCN4A	TRERF1	0.0689	1
SMOC1	Amp_Xp11.22	0.0691	1
FUBP1	ZNF512B	0.0695	1
IRS4	NF1	0.0695	1
NF1	PTPN11	0.0695	1
ZNF512B	13q-Del	0.0695	1
8q-Amp	13q-Del	0.0695	1
6q-Del	Del_1q43	0.0695	1
Amp_3q26.33	Amp_4q12	0.0695	1
EGFR	PIK3CA	0.0696	1
PDGFRA	Del_6p25.3	0.0703	1
RB1	Del_22q13.31	0.0703	1
CIC	PIK3R1	0.0704	1
MYST4	ZBTB20	0.071	1
Del_3p21.31	Del_13q14.2	0.071	1
Amp_10p15.3	Del_2q37.3	0.0711	1
CREBZF	Del_14q24.3	0.0712	1
RET	Del_14q24.3	0.0712	1
Del_1q43	Del_14q24.3	0.0712	1
4q-Del	Del_9p23	0.0713	1
Amp_11q24.1	Del_9p23	0.0713	1
FUBP1	NF1	0.0715	1
NUDT11	13q-Del	0.0715	1
MYST4	Amp_7p11.2	0.0716	1
Amp_7p11.2	Amp_13q34	0.0716	1
10p-Amp	Amp_12p13.32	0.0717	1
22q-Del	Amp_12p13.32	0.0717	1
7p-Amp	22q-Del	0.0718	1
Amp_12p13.32	Del_8q24.3	0.0719	1
SLC6A3	SMARCA4	0.0722	1
ZMIZ1	18q-Del	0.0722	1
7p-Amp	Del_22q13.31	0.0727	1
Amp_4q12	Del_12q12	0.0727	1
ATRX	ZNF512B	0.0732	1
Del_3q13.31	Del_9p21.3	0.0733	1
CIC	TCF12	0.0744	1
Del_3p21.31	Del_6q24.3	0.0747	1
10q-Del	9q-Del	0.0749	1
CIC	18q-Del	0.0751	1
TP53	Xp-Del	0.0752	1
10p-Amp	Amp_17q25.1	0.0752	1
10p-Amp	Del_3q29	0.0752	1
22q-Del	Del_5q34	0.0752	1
NUDT11	Del_11p15.1	0.0753	1
CUL4B	PTEN	0.0758	1
CUL4B	Del_5p15.33	0.0758	1
PDGFRA	Amp_12q14.1	0.0758	1
PDGFRA	Del_3p21.31	0.0758	1
PTEN	STK19	0.0758	1
Del_2q37.3	Del_9p23	0.0759	1
PTPN11	7q-Amp	0.0761	1
PTPN11	Amp_7p11.2	0.0761	1
Amp_3q26.33	Del_3q29	0.0762	1
Amp_Xp11.22	Del_5q34	0.0762	1
DNMT3A	NAP1L2	0.0764	1
NRAS	PRX	0.0764	1
ARID2	ATRX	0.077	1
ATRX	Amp_13q34	0.077	1
ARID2	PIK3R1	0.0772	1
NUDT11	PIK3R1	0.0772	1
EGFR	RET	0.0773	1
RBBP6	1p-Del	0.0773	1
Del_10q26.3	Del_Xq21.1	0.0774	1
6q-Del	Del_8q24.3	0.0775	1
4q-Del	Del_9p21.3	0.0776	1
ATRX	Del_3p21.31	0.0779	1
11p-Del	Del_3q13.31	0.0784	1
Del_2q37.3	Del_3q29	0.0784	1
Del_2q37.3	Del_5q34	0.0784	1
ANKRD36	ATRX	0.0787	1
ATRX	IRS4	0.0787	1
ZNF709	Del_11p15.5	0.0787	1
Amp_7q32.3	Del_3q29	0.0789	1
ATRX	TNRC18	0.0791	1
ARID1A	Amp_11q24.1	0.0795	1
NUDT11	Del_9p21.3	0.0795	1
ANKRD36	MYT1	0.08	1
IRS4	MYT1	0.08	1
IRS4	PPL	0.08	1
IRS4	RB1	0.08	1
IRS4	RBBP6	0.08	1
IRS4	SCN4A	0.08	1
IRS4	TRERF1	0.08	1
MYT1	RET	0.08	1
PPL	PTPN11	0.08	1
PPL	RET	0.08	1
RBBP6	RET	0.08	1
RET	SCN4A	0.08	1
RET	TRERF1	0.08	1
SCN4A	Amp_2p24.3	0.08	1
Xq-Del	Del_1q43	0.08	1
AGBL1	Del_9p21.3	0.0802	1
NOTCH1	PPL	0.0803	1
NOTCH1	SCN4A	0.0803	1
TMEM216	12q-Del	0.0803	1
Amp_4q12	Del_Xq21.1	0.0803	1
Amp_12p13.32	Del_12q12	0.0805	1
ARID1A	Del_13q14.2	0.0806	1
ANKRD36	Amp_10p15.3	0.0813	1
PLXNA3	Amp_7q32.3	0.0813	1
ZMIZ1	Amp_7q32.3	0.0813	1
9p-Del	Del_4q34.3	0.0814	1
DNMT3A	8q-Amp	0.0816	1
PRX	Amp_19p13.3	0.0816	1
Del_2q37.3	Del_9p21.3	0.082	1
ZMIZ1	18p-Del	0.0824	1
18p-Del	Xp-Del	0.0824	1
9q-Del	Del_1p32.3	0.0824	1
PIK3CA	4q-Del	0.0828	1
12q-Del	Del_22q13.31	0.0835	1
Del_3q13.31	Del_22q13.31	0.0835	1
Amp_13q34	Del_6p25.3	0.0836	1
ARID2	NAP1L2	0.0838	1
CIB1	NUDT11	0.0838	1
KRT3	Del_7p22.3	0.0838	1
NRAS	NUDT11	0.0838	1
NUDT11	ZNF709	0.0838	1
RB1	Del_10q26.3	0.0838	1
8q-Amp	Del_13q14.2	0.0843	1
11q-Amp	1p-Del	0.0844	1
SMARCA4	ZBTB20	0.0848	1
SMARCA4	4p-Del	0.0848	1
ZBTB20	18q-Del	0.0848	1
18q-Del	4p-Del	0.0848	1
AGBL1	PLXNA3	0.0855	1
BRAF	PLXNA3	0.0855	1
BRAF	SLC6A3	0.0855	1
BRAF	TNRC18	0.0855	1
BRAF	ZMIZ1	0.0855	1
DDX5	PLXNA3	0.0855	1
DDX5	SLC6A3	0.0855	1
DDX5	TNRC18	0.0855	1
DDX5	ZMIZ1	0.0855	1
HTRA2	Xp-Del	0.0855	1
PLXNA3	ZNF512B	0.0855	1
ROBO3	ZMIZ1	0.0855	1
TNRC18	ZNF512B	0.0855	1
ZMIZ1	ZNF512B	0.0855	1
DNMT3A	Del_4q34.3	0.0861	1
PTEN	Del_6p25.3	0.0872	1
PIK3CA	RBBP6	0.0873	1
PIK3CA	TRERF1	0.0873	1
SETD2	18q-Del	0.0874	1
Amp_3q26.33	Del_14q24.3	0.088	1
Amp_17q25.1	Del_Xq21.1	0.088	1
Del_3q29	Del_Xq21.1	0.088	1
Del_5q34	Del_Xq21.1	0.088	1
AGBL1	10p-Del	0.0893	1
13q-Del	Amp_3q26.33	0.0893	1
Amp_3q26.33	Del_6q22.31	0.0893	1
ANKRD36	11p-Del	0.0895	1
12q-Del	Del_13q14.2	0.0896	1
Del_6p25.3	Del_18q23	0.0896	1
NUDT11	Del_9p23	0.09	1
MYST4	PTEN	0.0901	1
NF1	Amp_1q32.1	0.0901	1
Amp_11q24.1	Amp_17q25.1	0.0901	1
Del_3p21.31	Del_7p22.3	0.0901	1
PIK3R1	Amp_3q26.33	0.0902	1
NRAS	1p-Del	0.0905	1
ATRX	Del_6q24.3	0.0906	1
EGFR	Del_6q22.31	0.0908	1
CIB1	Amp_Xp11.22	0.0911	1
ANKRD36	Del_9p23	0.0916	1
RBPJ	Del_9p23	0.0916	1
12q-Del	Amp_4q12	0.0917	1
ANKRD36	IRS4	0.0927	1
IRS4	RET	0.0927	1
RBPJ	RET	0.0927	1
Amp_17q25.1	Del_9p23	0.0931	1
RBBP6	19q-Del	0.0932	1
PDGFRA	Del_12q12	0.0934	1
RET	Del_22q13.31	0.0937	1
NIPBL	15q-Del	0.0941	1
9q-Del	Amp_19p13.2	0.0941	1
11p-Del	Amp_12q14.1	0.0943	1
9p-Del	Xp-Del	0.0945	1
BRAF	CUL4B	0.0946	1
BRAF	DNMT3A	0.0946	1
BRAF	PDGFRA	0.0946	1
BRAF	PRX	0.0946	1
BRAF	SETD2	0.0946	1
CUL4B	DDX5	0.0946	1
CUL4B	ZNF512B	0.0946	1
DDX5	DNMT3A	0.0946	1
DDX5	PDGFRA	0.0946	1
DDX5	PRX	0.0946	1
DDX5	SETD2	0.0946	1
DDX5	STK19	0.0946	1
DNMT3A	ZNF512B	0.0946	1
NEU2	PRX	0.0946	1
NEU2	SETD2	0.0946	1
PDGFRA	ZNF512B	0.0946	1
PRX	ZNF512B	0.0946	1
ROBO3	STK19	0.0946	1
SETD2	ZNF512B	0.0946	1
STK19	ZNF512B	0.0946	1
PIK3R1	18q-Del	0.0949	1
Amp_1q32.1	Del_8q24.3	0.0954	1
TP53	TRERF1	0.0957	1
MYST4	8q-Amp	0.0968	1
TP53	9p-Del	0.0968	1
8q-Amp	Del_7p22.3	0.0968	1
Amp_13q34	Amp_19p13.3	0.0968	1
RBBP6	Del_1p32.3	0.0969	1
PIK3CA	4p-Del	0.0974	1
Amp_12p13.32	Del_13q14.2	0.0975	1
Amp_3q26.33	Del_6p25.3	0.0976	1
CREBZF	14q-Del	0.098	1
FUBP1	PPL	0.0982	1
FUBP1	RBBP6	0.0982	1
RBBP6	13q-Del	0.0982	1
AGBL1	10q-Del	0.0984	1
RBBP6	Del_1p36.32	0.0988	1
10p-Amp	9p-Del	0.0989	1
15q-Del	Del_18q23	0.099	1
9q-Del	Del_18q23	0.099	1
KRAS	18q-Del	0.0995	1
DNMT3A	Amp_11q24.1	0.0996	1
SETD2	18p-Del	0.0996	1
CIC	SLC6A3	0.1	1
Del_3q13.31	Del_5q34	0.1	1
ZBTB20	18p-Del	0.101	1
18p-Del	4p-Del	0.101	1
CUL4B	7p-Amp	0.102	1
EMG1	ZMIZ1	0.102	1
MYT1	PLXNA3	0.102	1
MYT1	SLC6A3	0.102	1
MYT1	TNRC18	0.102	1
MYT1	ZMIZ1	0.102	1
PLXNA3	RBBP6	0.102	1
PLXNA3	SCN4A	0.102	1
PLXNA3	TRERF1	0.102	1
PPL	SLC6A3	0.102	1
PPL	TNRC18	0.102	1
PPL	ZMIZ1	0.102	1
PTEN	Del_18q23	0.102	1
RB1	SLC6A3	0.102	1
RB1	TNRC18	0.102	1
RB1	ZMIZ1	0.102	1
RBBP6	SLC6A3	0.102	1
RBBP6	TNRC18	0.102	1
SCN4A	SLC6A3	0.102	1
SCN4A	TNRC18	0.102	1
SCN4A	ZMIZ1	0.102	1
SLC6A3	TRERF1	0.102	1
SMARCA4	Amp_10p15.3	0.102	1
TNRC18	TRERF1	0.102	1
TP53	Amp_17q25.1	0.102	1
TRERF1	ZMIZ1	0.102	1
TRERF1	Xp-Del	0.102	1
22q-Del	Amp_10p15.3	0.102	1
Del_5p15.33	Del_22q13.31	0.102	1
Del_5q34	Del_6q22.31	0.102	1
ARID1A	15q-Del	0.103	1
Del_3q13.31	Del_10q26.3	0.103	1
ARID2	BRAF	0.104	1
ARID2	DDX5	0.104	1
ARID2	ZNF512B	0.104	1
BRAF	MYST4	0.104	1
BRAF	NUDT11	0.104	1
DDX5	MYST4	0.104	1
DDX5	NUDT11	0.104	1
MYST4	ZNF512B	0.104	1
NEU2	NUDT11	0.104	1
NEU2	Del_7p22.3	0.104	1
NUDT11	ZNF512B	0.104	1
NUDT11	22q-Del	0.104	1
ROBO3	Del_7p22.3	0.104	1
SMARCA4	Del_7p22.3	0.104	1
22q-Del	Amp_13q34	0.104	1
Amp_3q26.33	Del_6q24.3	0.104	1
FAM47C	Del_8q24.3	0.105	1
19p-Amp	Del_3p21.31	0.105	1
14q-Del	15q-Del	0.105	1
14q-Del	9q-Del	0.105	1
Amp_8q24.13	Amp_13q34	0.105	1
Amp_8q24.13	Del_7p22.3	0.105	1
PTEN	Amp_19p13.3	0.106	1
SMARCA4	Del_6p25.3	0.106	1
18p-Del	Del_14q24.3	0.106	1
18q-Del	Del_6p25.3	0.106	1
Amp_19p13.3	Del_3p21.31	0.106	1
Del_2q37.3	Del_3q13.31	0.106	1
Del_8q24.3	Del_9p23	0.106	1
IRS4	NOTCH1	0.107	1
KRAS	18p-Del	0.107	1
KRAS	Amp_11q24.1	0.107	1
7p-Amp	Del_8q24.3	0.107	1
AGBL1	7p-Amp	0.108	1
SRPX	Del_14q24.3	0.108	1
GAGE2A	7q-Amp	0.109	1
NRAS	Del_1p32.3	0.109	1
RB1	Del_6q24.3	0.109	1
ZMIZ1	1p-Del	0.109	1
CIB1	Del_1p36.32	0.11	1
NF1	PLXNA3	0.11	1
NF1	TNRC18	0.11	1
NF1	ZMIZ1	0.11	1
NRAS	Del_1p36.32	0.11	1
ANKRD36	Del_2q37.3	0.111	1
RET	Del_2q37.3	0.111	1
9q-Del	Del_13q14.2	0.111	1
Amp_2p24.3	Del_2q37.3	0.111	1
Amp_12q14.1	Del_4q34.3	0.111	1
Amp_13q34	Del_12q12	0.111	1
Del_7p22.3	Del_12q12	0.111	1
11q-Amp	19q-Del	0.112	1
4q-Del	Del_11p15.1	0.112	1
6q-Del	Del_13q14.2	0.112	1
Amp_Xp11.22	Del_9p21.3	0.112	1
AGBL1	Amp_Xp11.22	0.113	1
CIB1	15q-Del	0.113	1
CIC	EMG1	0.113	1
CUL4B	MYT1	0.113	1
CUL4B	RB1	0.113	1
CUL4B	RBBP6	0.113	1
CUL4B	SCN4A	0.113	1
DNMT3A	MYT1	0.113	1
DNMT3A	PPL	0.113	1
DNMT3A	RB1	0.113	1
DNMT3A	RBBP6	0.113	1
DNMT3A	SCN4A	0.113	1
DNMT3A	TRERF1	0.113	1
DNMT3A	Xq-Del	0.113	1
IDH2	TMEM216	0.113	1
MYT1	PDGFRA	0.113	1
MYT1	SETD2	0.113	1
MYT1	STK19	0.113	1
NAP1L2	15q-Del	0.113	1
PDGFRA	PPL	0.113	1
PDGFRA	RB1	0.113	1
PDGFRA	RBBP6	0.113	1
PDGFRA	SCN4A	0.113	1
PDGFRA	TRERF1	0.113	1
PPL	PRX	0.113	1
PPL	SETD2	0.113	1
PPL	STK19	0.113	1
PRX	RB1	0.113	1
PRX	RBBP6	0.113	1
PRX	SCN4A	0.113	1
PRX	TRERF1	0.113	1
RB1	STK19	0.113	1
RBBP6	SETD2	0.113	1
RBBP6	STK19	0.113	1
RBBP6	Amp_1q22	0.113	1
ROBO3	Amp_3q26.33	0.113	1
SCN4A	SETD2	0.113	1
SETD2	TRERF1	0.113	1
SRPX	Amp_7p11.2	0.113	1
STK19	TRERF1	0.113	1
TMEM216	Amp_17q25.1	0.113	1
8q-Amp	Amp_Xp11.22	0.113	1
9q-Del	Del_3q29	0.113	1
9q-Del	Del_5q34	0.113	1
Amp_3q26.33	Amp_19p13.3	0.113	1
Amp_7p11.2	Amp_8q24.13	0.113	1
GAGE2A	11p-Del	0.114	1
Del_2q37.3	Del_6q24.3	0.114	1
IDH1	4p-Del	0.115	1
RBPJ	Del_19q13.41	0.115	1
ARID1A	Del_19q13.41	0.116	1
IDH1	TCF12	0.116	1
11q-Amp	Del_18q23	0.116	1
ATRX	Del_3q13.31	0.117	1
SMARCA4	Del_9p23	0.117	1
10p-Amp	Del_5p15.33	0.117	1
10p-Amp	Del_9p23	0.117	1
22q-Del	Del_5p15.33	0.117	1
Amp_10p15.3	Del_10q26.3	0.117	1
FUBP1	ZBTB20	0.118	1
IRS4	PLXNA3	0.118	1
IRS4	TNRC18	0.118	1
IRS4	Xp-Del	0.118	1
PLXNA3	RET	0.118	1
PTPN11	Amp_7q31.2	0.118	1
RET	SLC6A3	0.118	1
RET	TNRC18	0.118	1
RET	ZMIZ1	0.118	1
7q-Amp	Amp_11q24.1	0.118	1
Xp-Del	Del_1q43	0.118	1
Amp_2p24.3	Amp_7q31.2	0.118	1
Amp_7q32.3	Del_2q37.3	0.118	1
Amp_10p15.3	Del_9p23	0.118	1
SMOC1	4p-Del	0.119	1
TMEM216	4p-Del	0.119	1
11q-Amp	Del_1p32.3	0.119	1
11p-Del	22q-Del	0.119	1
9q-Del	Amp_7q31.2	0.119	1
Amp_1q22	Del_11p15.5	0.119	1
Amp_3q26.33	Del_9p23	0.119	1
19p-Amp	22q-Del	0.12	1
14q-Del	Del_13q14.2	0.12	1
DDX5	Del_11p15.5	0.121	1
TCF12	Del_19q13.41	0.121	1
ZMIZ1	Del_19q13.41	0.121	1
Amp_12q14.1	Del_Xq21.1	0.121	1
Del_3p21.31	Del_Xq21.1	0.121	1
EGFR	PLXNA3	0.122	1
HTRA2	Del_Xq21.1	0.122	1
Amp_7q31.2	Amp_13q34	0.122	1
ARID2	MYT1	0.123	1
ARID2	PPL	0.123	1
ARID2	RB1	0.123	1
ARID2	RBBP6	0.123	1
ARID2	SCN4A	0.123	1
ARID2	TRERF1	0.123	1
EMG1	MYST4	0.123	1
EMG1	Del_7p22.3	0.123	1
MYST4	MYT1	0.123	1
MYST4	PPL	0.123	1
MYST4	RB1	0.123	1
MYST4	SCN4A	0.123	1
MYST4	TRERF1	0.123	1
MYT1	NUDT11	0.123	1
MYT1	Del_7p22.3	0.123	1
NUDT11	PPL	0.123	1
NUDT11	RB1	0.123	1
NUDT11	SCN4A	0.123	1
NUDT11	TRERF1	0.123	1
SCN4A	Del_7p22.3	0.123	1
11q-Amp	Del_1p36.32	0.123	1
14q-Del	Del_8q24.3	0.123	1
15q-Del	4p-Del	0.123	1
9p-Del	Amp_1q22	0.123	1
Xq-Del	Del_7p22.3	0.123	1
Del_7p22.3	Del_19q13.41	0.123	1
AGBL1	9p-Del	0.124	1
HTRA2	9p-Del	0.124	1
NEU2	9p-Del	0.124	1
PIK3R1	SMOC1	0.124	1
ZNF512B	Del_13q14.2	0.124	1
18p-Del	Del_6p25.3	0.125	1
Amp_1q22	Amp_12p13.32	0.125	1
Amp_11q24.1	Del_6p25.3	0.125	1
Del_1p36.32	Del_4q34.3	0.125	1
IDH2	11q-Amp	0.126	1
11q-Amp	Del_3q29	0.126	1
Del_5q34	Del_8q24.3	0.126	1
PTPN11	Del_10q26.3	0.127	1
SRPX	Amp_1q32.1	0.127	1
12q-Del	Del_6p25.3	0.127	1
Amp_12q14.1	Del_12q12	0.127	1
Del_1q43	Del_10q26.3	0.127	1
SMARCA4	8q-Amp	0.128	1
10p-Amp	8q-Amp	0.128	1
Xp-Del	Amp_10p15.3	0.128	1
Amp_3q26.33	Del_12q12	0.128	1
NIPBL	Amp_19p13.2	0.129	1
8q-Amp	Del_Xq21.1	0.129	1
14q-Del	Del_1p32.3	0.129	1
ANKRD36	DNMT3A	0.13	1
ANKRD36	Amp_1q22	0.13	1
BRAF	Del_3q13.31	0.13	1
CREBZF	PRX	0.13	1
CUL4B	IRS4	0.13	1
CUL4B	RET	0.13	1
CUL4B	Amp_2p24.3	0.13	1
DNMT3A	RET	0.13	1
FUBP1	IRS4	0.13	1
FUBP1	RET	0.13	1
HTRA2	Del_3q13.31	0.13	1
IRS4	PDGFRA	0.13	1
IRS4	SETD2	0.13	1
IRS4	STK19	0.13	1
IRS4	Amp_1q22	0.13	1
IRS4	Del_6q22.31	0.13	1
MED9	Del_6p25.3	0.13	1
NEU2	Del_3q13.31	0.13	1
PDGFRA	RBPJ	0.13	1
PDGFRA	RET	0.13	1
PRX	RET	0.13	1
RET	SETD2	0.13	1
RET	STK19	0.13	1
RET	Amp_1q22	0.13	1
Amp_1q22	Amp_2p24.3	0.13	1
Amp_1q22	Del_1q43	0.13	1
Amp_10p15.3	Del_22q13.31	0.13	1
Del_1q43	Del_6q22.31	0.13	1
PIK3CA	TCF12	0.131	1
ATRX	Amp_11q24.1	0.132	1
CUL4B	NF1	0.132	1
NF1	PRX	0.132	1
STK19	6q-Del	0.132	1
15q-Del	Del_10q26.3	0.132	1
9p-Del	Amp_11q24.1	0.132	1
9q-Del	Del_10q26.3	0.132	1
Amp_8q24.13	Del_4q34.3	0.132	1
PIK3R1	9q-Del	0.133	1
RBBP6	Del_4q34.3	0.133	1
RBPJ	Del_19q13.42	0.133	1
ANKRD36	Del_11p15.1	0.134	1
FAM47C	ZNF709	0.134	1
NIPBL	NRAS	0.134	1
PPL	Amp_Xp11.22	0.134	1
6q-Del	Del_2q37.3	0.134	1
PIK3R1	13q-Del	0.135	1
PIK3R1	Del_13q14.2	0.135	1
SMOC1	Del_5p15.33	0.135	1
12q-Del	Del_5p15.33	0.137	1
14q-Del	18q-Del	0.137	1
Xp-Del	Del_14q24.3	0.137	1
Amp_3q26.33	Amp_11q24.1	0.137	1
10p-Amp	Del_Xq21.1	0.138	1
4q-Del	Del_5p15.33	0.138	1
Amp_7q31.2	Amp_17q25.1	0.138	1
Amp_7q31.2	Del_3q29	0.138	1
HTRA2	9q-Del	0.139	1
NEU2	9q-Del	0.139	1
7p-Amp	Del_3p21.31	0.139	1
ZMIZ1	Del_1p32.3	0.14	1
11p-Del	Xp-Del	0.14	1
Amp_19p13.3	Del_19q13.42	0.14	1
ARID1A	NAP1L2	0.141	1
ATRX	Del_9p23	0.141	1
NOTCH1	Amp_19p13.3	0.141	1
ANKRD36	Del_7p22.3	0.142	1
ARID2	IRS4	0.142	1
CREBZF	MYST4	0.142	1
IRS4	MYST4	0.142	1
IRS4	NUDT11	0.142	1
MYST4	RET	0.142	1
NUDT11	RET	0.142	1
NUDT11	Del_1q43	0.142	1
ZMIZ1	Del_19q13.42	0.142	1
Amp_2p24.3	Del_7p22.3	0.142	1
Amp_13q34	Del_1q43	0.142	1
Del_12q12	Del_22q13.31	0.142	1
EGFR	Del_13q14.2	0.143	1
PIK3CA	Del_3p21.31	0.143	1
PTPN11	Amp_7q32.3	0.143	1
ZMIZ1	Del_1p36.32	0.143	1
15q-Del	Del_6p25.3	0.143	1
9q-Del	Del_6p25.3	0.143	1
PPL	Del_Xq21.1	0.144	1
11q-Amp	Del_2q37.3	0.144	1
7q-Amp	Del_3p21.31	0.144	1
Amp_7p11.2	Del_3p21.31	0.144	1
Amp_8q24.13	Del_13q14.2	0.144	1
Del_1q43	Del_6q24.3	0.144	1
Del_9p23	Del_11p15.5	0.144	1
ATRX	10p-Amp	0.145	1
SMARCA4	Del_4q34.3	0.145	1
TP53	Amp_4q12	0.145	1
18q-Del	Del_4q34.3	0.145	1
EGFR	PRX	0.146	1
EGFR	STK19	0.146	1
MED9	22q-Del	0.146	1
PLXNA3	7q-Amp	0.146	1
PLXNA3	Amp_7p11.2	0.146	1
PLXNA3	Del_18q23	0.146	1
SMARCA4	SMOC1	0.146	1
ZMIZ1	7q-Amp	0.146	1
Xp-Del	Del_18q23	0.146	1
Xp-Del	Del_22q13.31	0.146	1
ARID1A	Del_19q13.42	0.147	1
DNMT3A	GAGE2A	0.147	1
KRAS	Del_18q23	0.147	1
11p-Del	4q-Del	0.147	1
Amp_12p13.32	Amp_13q34	0.147	1
Del_7p22.3	Del_19q13.42	0.147	1
Del_12q12	Del_Xq21.1	0.147	1
CIB1	IDH2	0.148	1
CIB1	Del_3q29	0.148	1
HTRA2	Del_8q24.3	0.148	1
IDH2	NAP1L2	0.148	1
KRT3	Amp_17q25.1	0.148	1
KRT3	Del_5q34	0.148	1
NAP1L2	Del_5q34	0.148	1
NF1	ZBTB20	0.148	1
NRAS	Del_3q29	0.148	1
ZNF709	Amp_17q25.1	0.148	1
ZNF709	Del_5q34	0.148	1
NUDT11	Del_11p15.5	0.149	1
PLXNA3	SLC6A3	0.149	1
PLXNA3	TNRC18	0.149	1
SLC6A3	TNRC18	0.149	1
SLC6A3	ZMIZ1	0.149	1
TNRC18	ZMIZ1	0.149	1
ZMIZ1	Xp-Del	0.149	1
MYT1	7p-Amp	0.15	1
RB1	7p-Amp	0.15	1
13q-Del	14q-Del	0.15	1
Amp_4q12	Amp_7p11.2	0.15	1
IDH1	8q-Amp	0.151	1
TMEM216	Del_12q12	0.151	1
8q-Amp	Amp_11q24.1	0.151	1
10p-Del	Amp_17q25.1	0.151	1
13q-Del	9q-Del	0.152	1
14q-Del	Xp-Del	0.152	1
Amp_19p13.2	Del_22q13.31	0.152	1
DNMT3A	Amp_10p15.3	0.153	1
PRX	Amp_10p15.3	0.153	1
PTEN	15q-Del	0.153	1
9q-Del	Del_3p21.31	0.153	1
ANKRD36	Amp_3q26.33	0.154	1
ARID2	9p-Del	0.154	1
ATRX	EMG1	0.154	1
ATRX	PPL	0.154	1
CIB1	Amp_7q31.2	0.154	1
FAM47C	Del_5q34	0.154	1
IRS4	Amp_3q26.33	0.154	1
NUDT11	9p-Del	0.154	1
19p-Amp	Del_1q43	0.154	1
Amp_12q14.1	Del_9p21.3	0.154	1
ARID2	NF1	0.155	1
MYT1	12q-Del	0.155	1
ZBTB20	ZNF709	0.155	1
6q-Del	Del_7p22.3	0.155	1
Xq-Del	Del_3q13.31	0.155	1
Amp_17q25.1	Del_10q26.3	0.155	1
TMEM216	4q-Del	0.156	1
10p-Amp	Del_3q13.31	0.156	1
22q-Del	Del_3q13.31	0.156	1
9q-Del	Amp_7q32.3	0.156	1
Amp_8q24.13	Del_Xq21.1	0.156	1
NOTCH1	SMARCA4	0.157	1
ATRX	Del_13q14.2	0.159	1
9q-Del	Del_11p15.1	0.159	1
Amp_8q24.13	Del_3q29	0.159	1
9p-Del	Amp_10p15.3	0.16	1
ARID2	GAGE2A	0.161	1
GAGE2A	Del_7p22.3	0.161	1
13q-Del	Amp_12p13.32	0.161	1
Amp_10p15.3	Amp_17q25.1	0.161	1
Amp_10p15.3	Del_3q29	0.161	1
KRT3	Del_10q26.3	0.162	1
SRPX	Del_10q26.3	0.162	1
CUL4B	SLC6A3	0.164	1
CUL4B	TNRC18	0.164	1
CUL4B	ZMIZ1	0.164	1
DNMT3A	PLXNA3	0.164	1
DNMT3A	SLC6A3	0.164	1
PDGFRA	PLXNA3	0.164	1
PDGFRA	TNRC18	0.164	1
PDGFRA	ZMIZ1	0.164	1
PLXNA3	PRX	0.164	1
PLXNA3	STK19	0.164	1
PRX	SLC6A3	0.164	1
PRX	TNRC18	0.164	1
PRX	Xp-Del	0.164	1
RET	10p-Del	0.164	1
SETD2	SLC6A3	0.164	1
SETD2	TNRC18	0.164	1
SETD2	ZMIZ1	0.164	1
SLC6A3	STK19	0.164	1
STK19	TNRC18	0.164	1
STK19	ZMIZ1	0.164	1
BRAF	FAM47C	0.165	1
BRAF	NIPBL	0.165	1
DDX5	NIPBL	0.165	1
DDX5	Amp_19p13.2	0.165	1
EMG1	15q-Del	0.165	1
MYT1	TCF12	0.165	1
NIPBL	ZNF512B	0.165	1
SMARCA4	4q-Del	0.165	1
SMARCA4	Amp_11q24.1	0.165	1
TCF12	TRERF1	0.165	1
TRERF1	9q-Del	0.165	1
18p-Del	22q-Del	0.165	1
18q-Del	4q-Del	0.165	1
18q-Del	Amp_11q24.1	0.165	1
22q-Del	4q-Del	0.165	1
9q-Del	Xq-Del	0.165	1
4p-Del	Amp_7q31.2	0.166	1
Del_1q43	Del_Xq21.1	0.166	1
Del_2q37.3	Del_13q14.2	0.166	1
Del_3q13.31	Del_12q12	0.166	1
CUL4B	11p-Del	0.167	1
PDGFRA	11p-Del	0.167	1
11p-Del	Amp_1q22	0.167	1
1p-Del	Del_4q34.3	0.167	1
22q-Del	Del_2q37.3	0.167	1
ARID1A	Amp_17q25.1	0.168	1
CIC	RBPJ	0.168	1
CREBZF	IDH1	0.168	1
IDH1	Amp_2p24.3	0.168	1
IDH1	Del_1q43	0.168	1
14q-Del	18p-Del	0.168	1
ANKRD36	Amp_8q24.13	0.169	1
KRT3	Del_6p25.3	0.169	1
ZNF709	Del_6p25.3	0.169	1
Amp_8q24.13	Del_1q43	0.169	1
Del_6q24.3	Del_13q14.2	0.169	1
AGBL1	7q-Amp	0.17	1
AGBL1	Amp_7p11.2	0.17	1
ARID2	EGFR	0.17	1
DDX5	7q-Amp	0.17	1
EGFR	MYST4	0.17	1
ROBO3	TP53	0.17	1
TP53	ZNF512B	0.17	1
19q-Del	Del_4q34.3	0.17	1
Amp_3q26.33	Amp_12p13.32	0.17	1
Del_3p21.31	Del_8q24.3	0.17	1
PTEN	Del_6q22.31	0.171	1
RBBP6	Del_13q14.2	0.171	1
9p-Del	Xq-Del	0.171	1
Xp-Del	Del_2q37.3	0.171	1
Del_3p21.31	Del_6q22.31	0.171	1
Del_5p15.33	Del_6q22.31	0.171	1
FAM47C	Del_19q13.41	0.172	1
Xp-Del	Del_9p23	0.172	1
Amp_1q22	Del_9p21.3	0.172	1
Amp_19p13.3	Del_1p36.32	0.172	1
IDH1	Del_Xq21.1	0.173	1
4q-Del	Amp_8q24.13	0.173	1
AGBL1	ARID1A	0.174	1
ARID1A	BRAF	0.174	1
ARID1A	DDX5	0.174	1
CREBZF	Del_4q34.3	0.174	1
DDX5	Amp_4q12	0.174	1
SETD2	Del_18q23	0.174	1
10q-Del	Amp_17q25.1	0.174	1
EMG1	11q-Amp	0.175	1
GAGE2A	Amp_Xp11.22	0.175	1
PPL	Del_8q24.3	0.175	1
18q-Del	9q-Del	0.175	1
22q-Del	9q-Del	0.175	1
Xq-Del	Del_8q24.3	0.175	1
IDH2	7q-Amp	0.176	1
KRT3	Amp_12q14.1	0.176	1
NRAS	Del_3p21.31	0.176	1
ZNF709	Amp_12q14.1	0.176	1
7q-Amp	Amp_17q25.1	0.176	1
7q-Amp	Del_3q29	0.176	1
18q-Del	Del_14q24.3	0.176	1
Amp_7p11.2	Amp_17q25.1	0.176	1
Del_6q22.31	Del_8q24.3	0.176	1
PIK3CA	18q-Del	0.177	1
TP53	Del_4q34.3	0.177	1
ANKRD36	Del_3q13.31	0.178	1
ARID2	Amp_10p15.3	0.178	1
NIPBL	NOTCH1	0.178	1
PIK3CA	TNRC18	0.178	1
PIK3CA	ZMIZ1	0.178	1
PTEN	Del_13q14.2	0.178	1
Amp_10p15.3	Amp_13q34	0.178	1
Amp_12q14.1	Del_13q14.2	0.178	1
ARID2	PLXNA3	0.179	1
ARID2	SLC6A3	0.179	1
ARID2	ZMIZ1	0.179	1
MYST4	TNRC18	0.179	1
NIPBL	PIK3R1	0.179	1
NUDT11	PLXNA3	0.179	1
NUDT11	TNRC18	0.179	1
NUDT11	ZMIZ1	0.179	1
RET	10q-Del	0.179	1
11q-Amp	Del_19q13.41	0.179	1
6q-Del	Amp_3q26.33	0.179	1
Xp-Del	Del_7p22.3	0.179	1
Amp_12q14.1	Del_11p15.1	0.18	1
ARID1A	ZBTB20	0.181	1
ARID1A	4p-Del	0.181	1
CUL4B	DNMT3A	0.181	1
CUL4B	PDGFRA	0.181	1
CUL4B	SETD2	0.181	1
CUL4B	STK19	0.181	1
DNMT3A	PDGFRA	0.181	1
DNMT3A	SETD2	0.181	1
DNMT3A	STK19	0.181	1
DNMT3A	Amp_1q22	0.181	1
PDGFRA	PRX	0.181	1
PDGFRA	SETD2	0.181	1
PDGFRA	STK19	0.181	1
PRX	STK19	0.181	1
PRX	14q-Del	0.181	1
SETD2	STK19	0.181	1
SETD2	14q-Del	0.181	1
14q-Del	Del_18q23	0.181	1
4p-Del	Amp_8q24.13	0.181	1
AGBL1	Del_5q34	0.182	1
EGFR	6q-Del	0.182	1
HTRA2	IDH2	0.182	1
HTRA2	Del_3q29	0.182	1
MED9	NF1	0.182	1
MED9	6q-Del	0.182	1
NEU2	Del_3q29	0.182	1
ZNF512B	Amp_17q25.1	0.182	1
ZNF512B	Del_3q29	0.182	1
Amp_17q25.1	Del_5q34	0.182	1
Del_3q29	Del_5q34	0.182	1
CIB1	8q-Amp	0.183	1
KRT3	8q-Amp	0.183	1
NAP1L2	Amp_19p13.3	0.183	1
9q-Del	Amp_7p11.2	0.184	1
RB1	Amp_1q32.1	0.185	1
Xq-Del	Amp_1q32.1	0.185	1
Amp_7q32.3	Amp_17q25.1	0.185	1
CIC	NUDT11	0.186	1
CUL4B	7q-Amp	0.186	1
CUL4B	Amp_7p11.2	0.186	1
PRX	Amp_7p11.2	0.186	1
SETD2	Amp_7p11.2	0.186	1
STK19	Amp_7p11.2	0.186	1
19q-Del	9q-Del	0.186	1
Del_1p32.3	Del_4q34.3	0.187	1
9p-Del	Amp_3q26.33	0.188	1
Amp_1q32.1	Del_5p15.33	0.188	1
Amp_3q26.33	Del_13q14.2	0.188	1
CIB1	22q-Del	0.189	1
KRT3	10p-Amp	0.189	1
NRAS	10p-Amp	0.189	1
NRAS	22q-Del	0.189	1
ZNF709	10p-Amp	0.189	1
BRAF	ZBTB20	0.19	1
CREBZF	9q-Del	0.19	1
DDX5	ZBTB20	0.19	1
HTRA2	4p-Del	0.19	1
RBPJ	9q-Del	0.19	1
ZBTB20	ZNF512B	0.19	1
9q-Del	Del_1q43	0.19	1
ATRX	Del_3q29	0.191	1
IDH2	Del_18q23	0.191	1
AGBL1	Del_9p23	0.192	1
HTRA2	Del_9p23	0.192	1
NEU2	Del_9p23	0.192	1
CIC	9q-Del	0.193	1
NUDT11	11p-Del	0.194	1
PLXNA3	19p-Amp	0.194	1
RBPJ	7p-Amp	0.194	1
SMARCA4	11q-Amp	0.194	1
11p-Del	Amp_13q34	0.194	1
Del_4q34.3	Del_19q13.41	0.194	1
ARID1A	PIK3R1	0.195	1
FAM47C	MYT1	0.195	1
FAM47C	PPL	0.195	1
FAM47C	RB1	0.195	1
FAM47C	RBBP6	0.195	1
FAM47C	SCN4A	0.195	1
FAM47C	TRERF1	0.195	1
MYT1	NIPBL	0.195	1
NIPBL	PPL	0.195	1
NIPBL	RB1	0.195	1
NIPBL	RBBP6	0.195	1
NIPBL	SCN4A	0.195	1
NIPBL	TRERF1	0.195	1
TRERF1	Amp_19p13.2	0.195	1
NOTCH1	PRX	0.196	1
NOTCH1	STK19	0.196	1
18p-Del	9q-Del	0.196	1
ARID2	CUL4B	0.197	1
ARID2	PRX	0.197	1
ARID2	SETD2	0.197	1
ARID2	STK19	0.197	1
CREBZF	Del_9p21.3	0.197	1
CUL4B	MYST4	0.197	1
CUL4B	NUDT11	0.197	1
DNMT3A	MYST4	0.197	1
DNMT3A	NUDT11	0.197	1
IDH2	4p-Del	0.197	1
MYST4	PDGFRA	0.197	1
MYST4	PRX	0.197	1
MYST4	SETD2	0.197	1
MYST4	STK19	0.197	1
NUDT11	PDGFRA	0.197	1
NUDT11	STK19	0.197	1
PTPN11	Del_9p21.3	0.197	1
RBPJ	Del_9p21.3	0.197	1
STK19	Del_7p22.3	0.197	1
4p-Del	Del_5q34	0.197	1
Amp_2p24.3	Del_9p21.3	0.197	1
FUBP1	PLXNA3	0.198	1
SLC6A3	13q-Del	0.198	1
ZMIZ1	13q-Del	0.198	1
BRAF	PIK3R1	0.199	1
CIB1	CIC	0.199	1
CIC	NAP1L2	0.199	1
CIC	SRPX	0.199	1
DDX5	PIK3R1	0.199	1
PIK3R1	ZNF512B	0.199	1
7p-Amp	Amp_17q25.1	0.199	1
7p-Amp	Del_3q29	0.199	1
ARID1A	NOTCH1	0.2	1
PTEN	Del_6q24.3	0.2	1
GAGE2A	12q-Del	0.201	1
GAGE2A	Del_3q13.31	0.201	1
IRS4	Del_8q24.3	0.201	1
PTPN11	Del_8q24.3	0.201	1
14q-Del	Amp_17q25.1	0.201	1
14q-Del	Del_5q34	0.201	1
Amp_19p13.3	Del_19q13.41	0.201	1
NRAS	Del_19q13.41	0.202	1
ANKRD36	TP53	0.203	1
FAM47C	19q-Del	0.203	1
NRAS	4q-Del	0.203	1
NUDT11	Del_22q13.31	0.203	1
Amp_1q22	Del_2q37.3	0.203	1
Amp_13q34	Del_18q23	0.203	1
Amp_13q34	Del_22q13.31	0.203	1
Del_7p22.3	Del_22q13.31	0.203	1
Xp-Del	Del_11p15.1	0.204	1
ARID1A	EMG1	0.205	1
ARID1A	MYT1	0.205	1
ARID1A	PPL	0.205	1
ARID1A	RB1	0.205	1
ARID1A	RBBP6	0.205	1
ARID1A	SCN4A	0.205	1
ARID1A	TRERF1	0.205	1
FAM47C	PTEN	0.205	1
7q-Amp	4p-Del	0.205	1
Amp_10p15.3	Amp_Xp11.22	0.205	1
Amp_19p13.2	Del_3p21.31	0.205	1
RBBP6	Del_19q13.41	0.206	1
SCN4A	Del_19q13.41	0.206	1
BRAF	Del_6p25.3	0.207	1
HTRA2	Del_6p25.3	0.207	1
NEU2	Del_6p25.3	0.207	1
ARID1A	Del_6p25.3	0.209	1
TP53	13q-Del	0.209	1
Amp_4q12	Del_6p25.3	0.209	1
CUL4B	PIK3CA	0.21	1
DNMT3A	PIK3CA	0.21	1
FAM47C	Del_19q13.42	0.21	1
IDH1	Amp_11q24.1	0.21	1
PIK3CA	PRX	0.21	1
PIK3CA	SETD2	0.21	1
EGFR	13q-Del	0.211	1
4p-Del	Del_18q23	0.211	1
ATRX	Del_6q22.31	0.212	1
PTPN11	Amp_1q32.1	0.212	1
ZBTB20	4p-Del	0.212	1
Amp_1q32.1	Del_1q43	0.212	1
MED9	Del_22q13.31	0.213	1
CUL4B	19p-Amp	0.214	1
CUL4B	Amp_Xp11.22	0.214	1
EMG1	Amp_17q25.1	0.214	1
EMG1	Del_3q29	0.214	1
GAGE2A	9q-Del	0.214	1
MYT1	Amp_17q25.1	0.214	1
MYT1	Del_5q34	0.214	1
PRX	19p-Amp	0.214	1
RBBP6	Del_3q29	0.214	1
SETD2	Amp_3q26.33	0.214	1
SETD2	Amp_Xp11.22	0.214	1
STK19	Amp_3q26.33	0.214	1
19p-Amp	Amp_1q22	0.214	1
Xq-Del	Del_3q29	0.214	1
Amp_1q22	Amp_3q26.33	0.214	1
AGBL1	Del_3p21.31	0.215	1
AGBL1	Del_5p15.33	0.215	1
ANKRD36	Del_11p15.5	0.215	1
ARID2	MYST4	0.215	1
ARID2	NUDT11	0.215	1
ARID2	Amp_13q34	0.215	1
DDX5	PTEN	0.215	1
DDX5	Del_5p15.33	0.215	1
HTRA2	Del_3p21.31	0.215	1
PIK3CA	18p-Del	0.215	1
PTEN	ZNF512B	0.215	1
11q-Amp	Del_19q13.42	0.215	1
Amp_10p15.3	Del_6p25.3	0.216	1
EMG1	IDH1	0.217	1
NOTCH1	Amp_7q31.2	0.217	1
11q-Amp	18p-Del	0.217	1
MED9	14q-Del	0.218	1
SMOC1	14q-Del	0.218	1
11q-Amp	7q-Amp	0.218	1
7q-Amp	Del_8q24.3	0.218	1
Amp_1q22	Del_9p23	0.218	1
Amp_7p11.2	Del_8q24.3	0.218	1
FAM47C	Del_1p36.32	0.22	1
PIK3CA	Amp_4q12	0.22	1
4p-Del	Amp_7q32.3	0.22	1
ANKRD36	9p-Del	0.221	1
NRAS	Del_19q13.42	0.221	1
PPL	Del_14q24.3	0.221	1
RBBP6	Del_14q24.3	0.221	1
RBPJ	9p-Del	0.221	1
RBPJ	Del_13q14.2	0.221	1
RET	Del_13q14.2	0.221	1
9p-Del	Amp_2p24.3	0.221	1
Xq-Del	Del_14q24.3	0.221	1
AGBL1	Amp_19p13.3	0.223	1
ARID1A	Del_3p21.31	0.223	1
HTRA2	8q-Amp	0.223	1
NEU2	Amp_19p13.3	0.223	1
SLC6A3	Del_3q13.31	0.223	1
7p-Amp	Amp_11q24.1	0.223	1
14q-Del	Del_1p36.32	0.223	1
Xp-Del	Del_3q13.31	0.223	1
Del_2q37.3	Del_22q13.31	0.223	1
FAM47C	IRS4	0.224	1
FAM47C	RET	0.224	1
IRS4	NIPBL	0.224	1
KRT3	Del_9p21.3	0.224	1
MYT1	ZBTB20	0.224	1
NIPBL	RET	0.224	1
RB1	ZBTB20	0.224	1
RBBP6	ZBTB20	0.224	1
SCN4A	ZBTB20	0.224	1
TRERF1	ZBTB20	0.224	1
ZNF709	Del_9p21.3	0.224	1
Amp_7q32.3	Del_18q23	0.224	1
Amp_19p13.2	Del_1q43	0.224	1
FAM47C	FUBP1	0.225	1
FUBP1	NIPBL	0.225	1
DDX5	Amp_7q31.2	0.226	1
GAGE2A	Del_8q24.3	0.226	1
HTRA2	Amp_7q31.2	0.226	1
NEU2	Amp_7q31.2	0.226	1
SLC6A3	TP53	0.226	1
4q-Del	Del_14q24.3	0.226	1
SMARCA4	9p-Del	0.227	1
PIK3R1	ZBTB20	0.228	1
ATRX	SLC6A3	0.229	1
NRAS	Amp_12p13.32	0.229	1
PDGFRA	Del_Xq21.1	0.229	1
SETD2	Del_Xq21.1	0.229	1
7q-Amp	Amp_13q34	0.229	1
MYT1	7q-Amp	0.23	1
MYT1	Amp_7p11.2	0.23	1
RB1	7q-Amp	0.23	1
RBBP6	Del_19q13.42	0.23	1
SCN4A	Del_19q13.42	0.23	1
Xp-Del	Del_10q26.3	0.23	1
Del_10q26.3	Del_12q12	0.23	1
AGBL1	10p-Amp	0.231	1
AGBL1	22q-Del	0.231	1
BRAF	SMARCA4	0.231	1
DDX5	SMARCA4	0.231	1
DDX5	22q-Del	0.231	1
HTRA2	22q-Del	0.231	1
NEU2	SMARCA4	0.231	1
ROBO3	SMARCA4	0.231	1
ROBO3	10p-Amp	0.231	1
13q-Del	Del_12q12	0.231	1
NF1	18q-Del	0.232	1
NIPBL	SMARCA4	0.232	1
NIPBL	18q-Del	0.232	1
NUDT11	Amp_Xp11.22	0.232	1
PIK3R1	Del_18q23	0.232	1
19p-Amp	Amp_13q34	0.232	1
22q-Del	Amp_19p13.2	0.232	1
Amp_3q26.33	Amp_13q34	0.232	1
Amp_3q26.33	Del_22q13.31	0.232	1
ATRX	Del_8q24.3	0.233	1
CUL4B	FUBP1	0.233	1
EMG1	PIK3R1	0.233	1
FUBP1	PRX	0.233	1
FUBP1	SETD2	0.233	1
MYT1	PIK3R1	0.233	1
NF1	9p-Del	0.233	1
PIK3R1	PPL	0.233	1
PIK3R1	RB1	0.233	1
PIK3R1	RBBP6	0.233	1
PIK3R1	SCN4A	0.233	1
PIK3R1	TRERF1	0.233	1
SETD2	13q-Del	0.233	1
STK19	Del_6q22.31	0.233	1
Amp_8q24.13	Del_22q13.31	0.234	1
ARID1A	RBPJ	0.235	1
ARID1A	RET	0.235	1
ARID2	Del_2q37.3	0.235	1
CREBZF	Amp_4q12	0.235	1
FAM47C	Del_11p15.1	0.235	1
KRT3	NF1	0.235	1
NF1	SRPX	0.235	1
NF1	ZNF709	0.235	1
PTPN11	Amp_4q12	0.235	1
RBPJ	Amp_4q12	0.235	1
CIC	11q-Amp	0.236	1
SLC6A3	TCF12	0.237	1
TCF12	TNRC18	0.237	1
TCF12	Xp-Del	0.237	1
ZMIZ1	15q-Del	0.237	1
Del_6q22.31	Del_13q14.2	0.237	1
HTRA2	Del_12q12	0.239	1
7p-Amp	Amp_10p15.3	0.239	1
18q-Del	Amp_7q32.3	0.24	1
CUL4B	Del_11p15.1	0.241	1
PDGFRA	Del_11p15.1	0.241	1
Amp_12q14.1	Amp_17q25.1	0.241	1
Del_3q29	Del_5p15.33	0.241	1
TP53	Del_7p22.3	0.242	1
ATRX	Amp_7q31.2	0.243	1
PPL	Del_6p25.3	0.243	1
ZBTB20	Del_6p25.3	0.243	1
9p-Del	Amp_17q25.1	0.243	1
Xq-Del	Del_6p25.3	0.243	1
Amp_8q24.13	Del_8q24.3	0.243	1
PIK3R1	14q-Del	0.244	1
18q-Del	Del_6q24.3	0.244	1
Del_13q14.2	Del_14q24.3	0.244	1
NOTCH1	ZBTB20	0.245	1
PDGFRA	12q-Del	0.245	1
PDGFRA	Del_3q13.31	0.245	1
ANKRD36	Amp_17q25.1	0.246	1
FAM47C	Del_12q12	0.246	1
IRS4	Amp_17q25.1	0.246	1
PTPN11	Del_3q29	0.246	1
RBPJ	Del_5q34	0.246	1
Amp_2p24.3	Amp_17q25.1	0.246	1
Amp_2p24.3	Del_3q29	0.246	1
DDX5	18p-Del	0.247	1
DDX5	4q-Del	0.247	1
HTRA2	4q-Del	0.247	1
ROBO3	Amp_11q24.1	0.247	1
PIK3CA	7p-Amp	0.249	1
Amp_13q34	Del_Xq21.1	0.249	1
ARID1A	FUBP1	0.251	1
EGFR	Del_6q24.3	0.251	1
IDH1	Del_4q34.3	0.251	1
PLXNA3	11q-Amp	0.251	1
PLXNA3	Del_8q24.3	0.251	1
SLC6A3	Del_8q24.3	0.251	1
ZMIZ1	Del_8q24.3	0.251	1
ARID1A	SMARCA4	0.252	1
ARID1A	10p-Amp	0.252	1
ARID1A	18q-Del	0.252	1
EMG1	Del_3p21.31	0.252	1
FUBP1	4q-Del	0.252	1
FUBP1	Del_14q24.3	0.252	1
MED9	13q-Del	0.252	1
MED9	Del_6q22.31	0.252	1
MYT1	PTEN	0.252	1
MYT1	Del_3p21.31	0.252	1
MYT1	Del_5p15.33	0.252	1
PPL	PTEN	0.252	1
PTEN	RBBP6	0.252	1
PTEN	SCN4A	0.252	1
PTEN	TRERF1	0.252	1
PTEN	Xq-Del	0.252	1
RBBP6	Amp_12q14.1	0.252	1
TMEM216	13q-Del	0.252	1
TMEM216	Del_6q22.31	0.252	1
13q-Del	Del_14q24.3	0.252	1
15q-Del	6q-Del	0.252	1
9p-Del	Del_12q12	0.252	1
Xp-Del	Amp_8q24.13	0.252	1
Xq-Del	Amp_12q14.1	0.252	1
Xq-Del	Del_3p21.31	0.252	1
Xq-Del	Del_5p15.33	0.252	1
Del_4q34.3	Del_8q24.3	0.252	1
Amp_7p11.2	Del_14q24.3	0.253	1
ATRX	Amp_7q32.3	0.254	1
7p-Amp	9q-Del	0.254	1
IDH1	NUDT11	0.255	1
IDH1	Del_7p22.3	0.255	1
KRT3	Amp_10p15.3	0.255	1
NRAS	Amp_10p15.3	0.255	1
ZNF709	Amp_10p15.3	0.255	1
IDH2	8q-Amp	0.256	1
PDGFRA	Del_6q24.3	0.256	1
RBPJ	ZBTB20	0.256	1
RET	4p-Del	0.256	1
STK19	Del_6q24.3	0.256	1
8q-Amp	Del_5q34	0.256	1
Amp_1q22	Del_6q24.3	0.256	1
Amp_19p13.3	Del_3q29	0.256	1
ATRX	SMARCA4	0.257	1
DDX5	Amp_7q32.3	0.258	1
HTRA2	Amp_7q32.3	0.258	1
NEU2	Amp_7q32.3	0.258	1
Xq-Del	Del_9p23	0.258	1
MED9	Del_1p36.32	0.259	1
NIPBL	18p-Del	0.259	1
NOTCH1	Amp_Xp11.22	0.259	1
12q-Del	9p-Del	0.259	1
4p-Del	Del_3p21.31	0.259	1
4p-Del	Del_5p15.33	0.259	1
9q-Del	Del_19q13.41	0.259	1
Amp_10p15.3	Del_3q13.31	0.259	1
Del_3q13.31	Del_13q14.2	0.259	1
CUL4B	TCF12	0.26	1
CUL4B	15q-Del	0.26	1
PDGFRA	9q-Del	0.26	1
PRX	15q-Del	0.26	1
9q-Del	Amp_1q22	0.26	1
EMG1	Amp_19p13.3	0.261	1
MYT1	8q-Amp	0.261	1
PPL	8q-Amp	0.261	1
10q-Del	Del_8q24.3	0.261	1
Amp_7q31.2	Del_3p21.31	0.261	1
13q-Del	Del_1p32.3	0.263	1
TCF12	TP53	0.264	1
Del_4q34.3	Del_5p15.33	0.264	1
PLXNA3	Amp_1q32.1	0.265	1
TNRC18	Amp_1q32.1	0.265	1
Xp-Del	Amp_1q32.1	0.265	1
ARID2	Del_9p23	0.266	1
Del_3q13.31	Del_7p22.3	0.266	1
CIB1	11p-Del	0.267	1
CREBZF	PIK3R1	0.267	1
IDH1	11q-Amp	0.267	1
IRS4	PIK3R1	0.267	1
KRT3	11p-Del	0.267	1
MED9	Del_6q24.3	0.267	1
PIK3R1	RET	0.267	1
SRPX	11p-Del	0.267	1
ARID2	FUBP1	0.269	1
ARID2	Del_6q22.31	0.269	1
CUL4B	Amp_7q31.2	0.269	1
FUBP1	MYST4	0.269	1
FUBP1	NUDT11	0.269	1
FUBP1	Del_7p22.3	0.269	1
MYST4	13q-Del	0.269	1
NF1	18p-Del	0.269	1
Amp_1q22	Amp_7q31.2	0.269	1
Amp_3q26.33	Del_Xq21.1	0.269	1
EMG1	10p-Amp	0.271	1
GAGE2A	Del_13q14.2	0.271	1
IDH1	ZBTB20	0.271	1
IDH2	18q-Del	0.271	1
RB1	SMARCA4	0.271	1
RB1	18q-Del	0.271	1
RBBP6	SMARCA4	0.271	1
SCN4A	SMARCA4	0.271	1
SMARCA4	TRERF1	0.271	1
SMARCA4	Amp_17q25.1	0.271	1
22q-Del	Xq-Del	0.271	1
Del_4q34.3	Del_19q13.42	0.271	1
CIB1	Del_22q13.31	0.273	1
EMG1	1p-Del	0.273	1
KRT3	Del_18q23	0.273	1
NAP1L2	Del_18q23	0.273	1
NRAS	Del_22q13.31	0.273	1
SCN4A	1p-Del	0.273	1
7q-Amp	Amp_Xp11.22	0.273	1
19q-Del	Del_7p22.3	0.273	1
Del_11p15.1	Del_14q24.3	0.274	1
DNMT3A	11q-Amp	0.275	1
DNMT3A	Del_8q24.3	0.275	1
EGFR	15q-Del	0.275	1
EGFR	9q-Del	0.275	1
PDGFRA	Del_8q24.3	0.275	1
PRX	Del_8q24.3	0.275	1
ZBTB20	Amp_19p13.3	0.275	1
8q-Amp	4p-Del	0.275	1
Amp_1q22	Del_8q24.3	0.275	1
Amp_12q14.1	Del_22q13.31	0.275	1
GAGE2A	IDH2	0.276	1
GAGE2A	Del_5q34	0.276	1
11p-Del	Del_9p23	0.276	1
IRS4	Del_6p25.3	0.277	1
NF1	Del_8q24.3	0.277	1
RBPJ	Del_6p25.3	0.277	1
13q-Del	Amp_17q25.1	0.277	1
Amp_2p24.3	Del_6p25.3	0.277	1
AGBL1	Amp_12p13.32	0.278	1
DDX5	Amp_12p13.32	0.278	1
FAM47C	PLXNA3	0.278	1
FAM47C	TNRC18	0.278	1
FAM47C	ZMIZ1	0.278	1
NEU2	Amp_12p13.32	0.278	1
NIPBL	PLXNA3	0.278	1
NIPBL	SLC6A3	0.278	1
NIPBL	TNRC18	0.278	1
PLXNA3	Amp_19p13.2	0.278	1
TNRC18	Amp_19p13.2	0.278	1
ZMIZ1	Amp_19p13.2	0.278	1
ZNF512B	Amp_12p13.32	0.278	1
18p-Del	Del_13q14.2	0.278	1
PTEN	Del_14q24.3	0.279	1
Amp_12q14.1	Del_14q24.3	0.279	1
ANKRD36	Del_14q24.3	0.28	1
ARID1A	18p-Del	0.28	1
ARID1A	4q-Del	0.28	1
EMG1	Del_12q12	0.28	1
IRS4	Del_14q24.3	0.28	1
MYT1	Del_12q12	0.28	1
IDH1	ROBO3	0.281	1
ARID2	9q-Del	0.282	1
MYST4	TCF12	0.282	1
15q-Del	Amp_13q34	0.282	1
9q-Del	Del_7p22.3	0.282	1
Amp_8q24.13	Del_9p23	0.282	1
NF1	NOTCH1	0.284	1
DDX5	NF1	0.285	1
NF1	ZNF512B	0.285	1
ROBO3	6q-Del	0.285	1
CUL4B	Del_10q26.3	0.286	1
MED9	10p-Del	0.286	1
PRX	Del_10q26.3	0.286	1
9p-Del	Del_11p15.5	0.286	1
Amp_1q22	Del_10q26.3	0.286	1
Del_3q29	Del_12q12	0.286	1
ATRX	DDX5	0.287	1
CIC	ZNF512B	0.287	1
CUL4B	10p-Del	0.287	1
GAGE2A	ZBTB20	0.287	1
NUDT11	Del_1p36.32	0.287	1
PLXNA3	7p-Amp	0.287	1
PRX	10p-Del	0.287	1
STK19	10p-Del	0.287	1
TNRC18	7p-Amp	0.287	1
TP53	Del_6p25.3	0.287	1
ZMIZ1	7p-Amp	0.287	1
12q-Del	Amp_3q26.33	0.287	1
12q-Del	Amp_Xp11.22	0.287	1
ANKRD36	PTEN	0.288	1
ANKRD36	Del_5p15.33	0.288	1
CREBZF	Del_3p21.31	0.288	1
IRS4	PTEN	0.288	1
IRS4	Del_3p21.31	0.288	1
IRS4	Del_5p15.33	0.288	1
PTPN11	Amp_12q14.1	0.288	1
Amp_2p24.3	Del_5p15.33	0.288	1
Amp_12q14.1	Del_1q43	0.288	1
Del_1q43	Del_5p15.33	0.288	1
EMG1	Amp_11q24.1	0.289	1
MYT1	4q-Del	0.289	1
PPL	Amp_11q24.1	0.289	1
RB1	18p-Del	0.289	1
18p-Del	Xq-Del	0.289	1
Xq-Del	Amp_11q24.1	0.289	1
CUL4B	Amp_1q32.1	0.29	1
PRX	Amp_1q32.1	0.29	1
SETD2	Amp_1q32.1	0.29	1
SMOC1	Amp_8q24.13	0.29	1
TMEM216	Amp_8q24.13	0.29	1
18p-Del	Del_6q24.3	0.29	1
ARID1A	PLXNA3	0.291	1
ARID1A	SLC6A3	0.291	1
ARID1A	TNRC18	0.291	1
ARID1A	Xp-Del	0.291	1
FAM47C	7q-Amp	0.291	1
IRS4	7q-Amp	0.291	1
RBPJ	7q-Amp	0.291	1
RBPJ	Amp_7p11.2	0.291	1
RET	Amp_7p11.2	0.291	1
SLC6A3	Amp_4q12	0.291	1
7q-Amp	Amp_2p24.3	0.291	1
CIC	ZMIZ1	0.292	1
IDH2	Amp_7q31.2	0.292	1
NAP1L2	NOTCH1	0.292	1
NOTCH1	NRAS	0.292	1
NOTCH1	SRPX	0.292	1
NOTCH1	ZNF709	0.292	1
PLXNA3	1p-Del	0.292	1
PIK3CA	PIK3R1	0.293	1
ARID2	Del_6q24.3	0.294	1
DNMT3A	Amp_8q24.13	0.294	1
TMEM216	Del_4q34.3	0.295	1
Del_3p21.31	Del_6p25.3	0.295	1
Del_5p15.33	Del_6p25.3	0.295	1
15q-Del	9p-Del	0.296	1
15q-Del	Del_13q14.2	0.296	1
Amp_19p13.3	Del_22q13.31	0.297	1
CREBZF	8q-Amp	0.298	1
KRT3	Del_2q37.3	0.298	1
MYST4	11q-Amp	0.298	1
TP53	Amp_7q32.3	0.298	1
ZNF709	Del_2q37.3	0.298	1
11q-Amp	Amp_13q34	0.298	1
11q-Amp	Del_7p22.3	0.298	1
8q-Amp	Amp_2p24.3	0.298	1
Amp_19p13.3	Del_1q43	0.298	1
Del_7p22.3	Del_8q24.3	0.298	1
7q-Amp	Del_5p15.33	0.299	1
BRAF	EGFR	0.3	1
DDX5	EGFR	0.3	1
EGFR	ZNF512B	0.3	1
MED9	10q-Del	0.3	1
IDH2	18p-Del	0.301	1
IDH2	4q-Del	0.301	1
IDH2	Amp_11q24.1	0.301	1
MYT1	Amp_7q31.2	0.301	1
RB1	Amp_7q31.2	0.301	1
TRERF1	Amp_7q31.2	0.301	1
Amp_7q32.3	Del_4q34.3	0.301	1
PDGFRA	Del_4q34.3	0.302	1
SETD2	Del_4q34.3	0.302	1
STK19	Del_4q34.3	0.302	1
TCF12	Del_19q13.42	0.302	1
9q-Del	Del_19q13.42	0.302	1
Amp_1q22	Del_4q34.3	0.302	1
Del_9p23	Del_18q23	0.303	1
CUL4B	FAM47C	0.304	1
CUL4B	NIPBL	0.304	1
DNMT3A	FAM47C	0.304	1
DNMT3A	NIPBL	0.304	1
FAM47C	PDGFRA	0.304	1
FAM47C	PRX	0.304	1
FAM47C	SETD2	0.304	1
FAM47C	STK19	0.304	1
IDH2	TNRC18	0.304	1
NIPBL	PDGFRA	0.304	1
NIPBL	PRX	0.304	1
NIPBL	SETD2	0.304	1
NIPBL	STK19	0.304	1
PIK3CA	SRPX	0.304	1
PIK3CA	ZNF709	0.304	1
PRX	Amp_19p13.2	0.304	1
TNRC18	Del_5q34	0.304	1
19p-Amp	15q-Del	0.304	1
19p-Amp	9q-Del	0.304	1
15q-Del	Amp_3q26.33	0.304	1
22q-Del	Amp_8q24.13	0.304	1
Xp-Del	Del_3q29	0.304	1
Amp_1q22	Amp_19p13.2	0.304	1
Amp_7p11.2	Amp_10p15.3	0.304	1
Amp_Xp11.22	Del_6q22.31	0.305	1
TCF12	1p-Del	0.306	1
1p-Del	9q-Del	0.306	1
EMG1	19q-Del	0.307	1
NOTCH1	Amp_7q32.3	0.307	1
PLXNA3	Del_19q13.41	0.307	1
PPL	19q-Del	0.307	1
SCN4A	19q-Del	0.307	1
13q-Del	Del_6q24.3	0.307	1
Del_3q13.31	Del_Xq21.1	0.307	1
ANKRD36	SMARCA4	0.308	1
ANKRD36	10p-Amp	0.308	1
ANKRD36	22q-Del	0.308	1
CREBZF	18q-Del	0.308	1
DDX5	Amp_10p15.3	0.308	1
FAM47C	1p-Del	0.308	1
IRS4	SMARCA4	0.308	1
IRS4	18q-Del	0.308	1
IRS4	22q-Del	0.308	1
PTPN11	22q-Del	0.308	1
RBPJ	10p-Amp	0.308	1
RBPJ	18q-Del	0.308	1
RET	SMARCA4	0.308	1
RET	18q-Del	0.308	1
ROBO3	Amp_10p15.3	0.308	1
18p-Del	Amp_7q32.3	0.309	1
CUL4B	10q-Del	0.31	1
PRX	10q-Del	0.31	1
STK19	10q-Del	0.31	1
Amp_7q31.2	Del_4q34.3	0.31	1
GAGE2A	Del_6p25.3	0.311	1
Del_3q29	Del_6q24.3	0.311	1
Del_5q34	Del_6q24.3	0.311	1
IDH1	15q-Del	0.312	1
8q-Amp	Del_6p25.3	0.313	1
TMEM216	7p-Amp	0.314	1
Amp_1q32.1	Amp_13q34	0.314	1
Amp_3q26.33	Del_11p15.1	0.314	1
Amp_12q14.1	Del_5p15.33	0.314	1
Del_3p21.31	Del_5p15.33	0.314	1
EMG1	Del_1p32.3	0.315	1
SCN4A	Del_1p32.3	0.315	1
Xp-Del	Del_11p15.5	0.315	1
Amp_Xp11.22	Del_9p23	0.315	1
CUL4B	Amp_7q32.3	0.316	1
PRX	Amp_7q32.3	0.316	1
18p-Del	Amp_10p15.3	0.316	1
22q-Del	Del_4q34.3	0.316	1
Xq-Del	Del_10q26.3	0.316	1
PIK3CA	10p-Del	0.317	1
PLXNA3	ZBTB20	0.317	1
PPL	TP53	0.317	1
SLC6A3	ZBTB20	0.317	1
TNRC18	4p-Del	0.317	1
TP53	Xq-Del	0.317	1
ZBTB20	Xp-Del	0.317	1
ARID1A	CUL4B	0.318	1
ARID1A	PDGFRA	0.318	1
ARID1A	SETD2	0.318	1
ARID1A	STK19	0.318	1
PRX	Amp_4q12	0.318	1
SETD2	Amp_4q12	0.318	1
Amp_2p24.3	Del_12q12	0.318	1
EMG1	Del_1p36.32	0.319	1
SCN4A	Del_1p36.32	0.319	1
SMARCA4	Del_18q23	0.319	1
10p-Amp	Del_22q13.31	0.319	1
BRAF	Del_9p21.3	0.32	1
HTRA2	Del_9p21.3	0.32	1
NEU2	Del_9p21.3	0.32	1
11q-Amp	Amp_Xp11.22	0.321	1
9q-Del	Del_22q13.31	0.321	1
Amp_3q26.33	Del_8q24.3	0.321	1
AGBL1	11p-Del	0.322	1
ATRX	PDGFRA	0.322	1
ATRX	STK19	0.322	1
FUBP1	KRT3	0.322	1
FUBP1	NRAS	0.322	1
HTRA2	11p-Del	0.322	1
NRAS	13q-Del	0.322	1
SLC6A3	Del_13q14.2	0.322	1
SRPX	Del_6q22.31	0.322	1
ZMIZ1	Del_13q14.2	0.322	1
MYT1	Amp_12p13.32	0.323	1
ZBTB20	4q-Del	0.323	1
ATRX	9p-Del	0.324	1
8q-Amp	Del_10q26.3	0.324	1
Amp_7q31.2	Del_7p22.3	0.324	1
CREBZF	Del_9p23	0.325	1
IRS4	Del_9p23	0.325	1
11q-Amp	Del_11p15.5	0.325	1
9q-Del	Del_Xq21.1	0.325	1
Amp_2p24.3	Del_9p23	0.325	1
ATRX	SMOC1	0.326	1
7p-Amp	14q-Del	0.326	1
CIB1	Del_11p15.1	0.327	1
FAM47C	NF1	0.327	1
KRT3	Del_11p15.1	0.327	1
NF1	NIPBL	0.327	1
NRAS	Del_11p15.1	0.327	1
SRPX	Del_11p15.1	0.327	1
CREBZF	18p-Del	0.328	1
IRS4	18p-Del	0.328	1
RBPJ	18p-Del	0.328	1
RET	18p-Del	0.328	1
RET	4q-Del	0.328	1
10p-Del	Amp_13q34	0.328	1
Amp_2p24.3	Amp_11q24.1	0.328	1
Amp_11q24.1	Del_1q43	0.328	1
Del_1q43	Del_19q13.41	0.328	1
AGBL1	Del_22q13.31	0.329	1
ARID2	FAM47C	0.329	1
ARID2	NIPBL	0.329	1
BRAF	Del_22q13.31	0.329	1
DDX5	Del_22q13.31	0.329	1
HTRA2	Del_22q13.31	0.329	1
MYST4	NIPBL	0.329	1
NIPBL	Amp_13q34	0.329	1
ROBO3	Del_18q23	0.329	1
7q-Amp	Del_2q37.3	0.329	1
Amp_13q34	Amp_19p13.2	0.329	1
PIK3R1	PLXNA3	0.33	1
PIK3R1	SLC6A3	0.33	1
PIK3R1	TNRC18	0.33	1
10p-Amp	Del_6p25.3	0.33	1
11q-Amp	Amp_7q31.2	0.331	1
7p-Amp	Del_4q34.3	0.331	1
11p-Del	Del_14q24.3	0.331	1
18q-Del	Amp_7q31.2	0.331	1
19q-Del	Del_14q24.3	0.331	1
Amp_7q31.2	Del_8q24.3	0.331	1
CUL4B	Amp_17q25.1	0.332	1
DNMT3A	IDH2	0.332	1
EMG1	NF1	0.332	1
IDH2	STK19	0.332	1
NF1	PPL	0.332	1
NF1	SCN4A	0.332	1
NF1	TRERF1	0.332	1
PDGFRA	Del_3q29	0.332	1
PDGFRA	Del_5q34	0.332	1
PRX	Del_3q29	0.332	1
RB1	6q-Del	0.332	1
SCN4A	6q-Del	0.332	1
SETD2	Del_5q34	0.332	1
STK19	Amp_17q25.1	0.332	1
8q-Amp	Del_3p21.31	0.332	1
8q-Amp	Del_5p15.33	0.332	1
Amp_1q22	Del_3q29	0.332	1
Amp_19p13.3	Del_5p15.33	0.332	1
Del_6q24.3	Del_18q23	0.332	1
DNMT3A	7p-Amp	0.333	1
GAGE2A	Amp_19p13.3	0.333	1
PRX	7p-Amp	0.333	1
SETD2	7p-Amp	0.333	1
STK19	7p-Amp	0.333	1
Amp_7q32.3	Del_3p21.31	0.333	1
Amp_7q32.3	Del_5p15.33	0.333	1
PLXNA3	19q-Del	0.334	1
12q-Del	Del_2q37.3	0.334	1
Del_8q24.3	Del_13q14.2	0.334	1
AGBL1	14q-Del	0.336	1
MED9	Del_13q14.2	0.336	1
MYST4	Amp_8q24.13	0.336	1
NUDT11	Amp_8q24.13	0.336	1
SMOC1	Del_13q14.2	0.336	1
TMEM216	9p-Del	0.336	1
TMEM216	Del_13q14.2	0.336	1
Amp_4q12	Amp_8q24.13	0.337	1
SRPX	Del_6q24.3	0.339	1
MYT1	Amp_7q32.3	0.34	1
RB1	Amp_7q32.3	0.34	1
RBBP6	Amp_7q32.3	0.34	1
13q-Del	Del_Xq21.1	0.34	1
PRX	TP53	0.342	1
STK19	TP53	0.342	1
TP53	Amp_1q22	0.342	1
ZMIZ1	Del_6p25.3	0.342	1
PIK3CA	PTEN	0.343	1
PIK3CA	Amp_12q14.1	0.343	1
PIK3R1	18p-Del	0.343	1
PLXNA3	Del_19q13.42	0.343	1
Del_4q34.3	Del_12q12	0.343	1
Del_8q24.3	Del_Xq21.1	0.343	1
ARID1A	ARID2	0.344	1
ARID1A	MYST4	0.344	1
ARID1A	NUDT11	0.344	1
ARID1A	Del_7p22.3	0.344	1
ARID2	Amp_4q12	0.344	1
GAGE2A	22q-Del	0.344	1
MYST4	Amp_4q12	0.344	1
NUDT11	Amp_4q12	0.344	1
PIK3CA	12q-Del	0.344	1
PLXNA3	Del_1p32.3	0.344	1
Amp_4q12	Amp_13q34	0.344	1
NF1	7p-Amp	0.345	1
NUDT11	Del_4q34.3	0.345	1
12q-Del	15q-Del	0.345	1
SETD2	ZBTB20	0.346	1
STK19	ZBTB20	0.346	1
Del_6p25.3	Del_12q12	0.347	1
EGFR	MYT1	0.349	1
EGFR	PPL	0.349	1
EGFR	RBBP6	0.349	1
EGFR	SCN4A	0.349	1
EGFR	Xq-Del	0.349	1
PLXNA3	Del_1p36.32	0.349	1
PTEN	SMARCA4	0.349	1
PTEN	18q-Del	0.349	1
SMARCA4	Del_3p21.31	0.349	1
18q-Del	Del_3p21.31	0.349	1
22q-Del	Amp_12q14.1	0.349	1
BRAF	NOTCH1	0.35	1
NEU2	NOTCH1	0.35	1
NOTCH1	ZNF512B	0.35	1
PIK3CA	Del_4q34.3	0.35	1
Del_8q24.3	Del_18q23	0.35	1
ROBO3	Del_19q13.41	0.351	1
ARID1A	NF1	0.352	1
NIPBL	19p-Amp	0.353	1
10q-Del	Amp_13q34	0.353	1
ARID1A	IDH1	0.354	1
EGFR	FAM47C	0.354	1
EGFR	NIPBL	0.354	1
NOTCH1	15q-Del	0.354	1
PIK3CA	Amp_7p11.2	0.354	1
PLXNA3	PTEN	0.354	1
PTEN	SLC6A3	0.354	1
PTEN	ZMIZ1	0.354	1
PTEN	Xp-Del	0.354	1
SLC6A3	Del_3p21.31	0.354	1
TNRC18	Del_5p15.33	0.354	1
ZMIZ1	Del_5p15.33	0.354	1
Xp-Del	Amp_12q14.1	0.354	1
Xp-Del	Del_3p21.31	0.354	1
Xp-Del	Del_5p15.33	0.354	1
GAGE2A	Del_12q12	0.355	1
Amp_12q14.1	Del_11p15.5	0.355	1
AGBL1	Del_2q37.3	0.357	1
EMG1	Amp_10p15.3	0.357	1
FAM47C	7p-Amp	0.357	1
HTRA2	Del_2q37.3	0.357	1
NIPBL	7p-Amp	0.357	1
TP53	11q-Amp	0.357	1
10p-Del	Del_3q29	0.357	1
14q-Del	Del_12q12	0.357	1
Amp_8q24.13	Amp_11q24.1	0.357	1
CIC	DNMT3A	0.358	1
Del_14q24.3	Del_18q23	0.358	1
ARID2	IDH2	0.359	1
ARID2	Del_5q34	0.359	1
CUL4B	PIK3R1	0.359	1
PDGFRA	PIK3R1	0.359	1
PIK3R1	SETD2	0.359	1
PIK3R1	STK19	0.359	1
Amp_13q34	Del_5q34	0.359	1
Del_3q29	Del_7p22.3	0.359	1
Del_5q34	Del_7p22.3	0.359	1
Del_1q43	Del_19q13.42	0.36	1
IDH2	Amp_7q32.3	0.361	1
TCF12	19q-Del	0.361	1
1p-Del	Amp_19p13.3	0.361	1
Amp_12p13.32	Amp_17q25.1	0.361	1
Del_1p32.3	Del_14q24.3	0.361	1
IDH1	NRAS	0.362	1
IDH1	ZNF709	0.362	1
KRT3	10p-Del	0.362	1
13q-Del	6q-Del	0.362	1
13q-Del	Del_2q37.3	0.362	1
CUL4B	Del_11p15.5	0.363	1
DNMT3A	Del_11p15.5	0.363	1
PDGFRA	Del_11p15.5	0.363	1
PRX	Del_11p15.5	0.363	1
18p-Del	Del_22q13.31	0.363	1
4q-Del	Del_18q23	0.363	1
4q-Del	Del_22q13.31	0.363	1
Amp_11q24.1	Del_18q23	0.363	1
BRAF	PIK3CA	0.364	1
DDX5	PIK3CA	0.364	1
NEU2	PIK3CA	0.364	1
PIK3CA	ZNF512B	0.364	1
11q-Amp	Del_3q13.31	0.364	1
Del_9p23	Del_Xq21.1	0.364	1
ATRX	GAGE2A	0.365	1
TCF12	15q-Del	0.365	1
TCF12	9q-Del	0.365	1
7q-Amp	22q-Del	0.365	1
15q-Del	9q-Del	0.365	1
CIB1	1p-Del	0.366	1
IRS4	Amp_12p13.32	0.366	1
NAP1L2	1p-Del	0.366	1
SMARCA4	7p-Amp	0.366	1
SRPX	1p-Del	0.366	1
TNRC18	Amp_19p13.3	0.366	1
ZMIZ1	8q-Amp	0.366	1
10p-Amp	7p-Amp	0.366	1
9q-Del	Del_2q37.3	0.366	1
Amp_7p11.2	Del_3q29	0.366	1
CIB1	Amp_8q24.13	0.367	1
KRT3	Amp_8q24.13	0.367	1
PIK3CA	10q-Del	0.367	1
ATRX	6q-Del	0.368	1
PIK3CA	Amp_19p13.3	0.368	1
SMARCA4	Amp_19p13.3	0.369	1
8q-Amp	22q-Del	0.369	1
22q-Del	Amp_19p13.3	0.369	1
Amp_4q12	Amp_Xp11.22	0.369	1
PDGFRA	9p-Del	0.371	1
PDGFRA	Del_13q14.2	0.371	1
PRX	9p-Del	0.371	1
SETD2	Del_13q14.2	0.371	1
STK19	9p-Del	0.371	1
CUL4B	Del_6p25.3	0.372	1
DNMT3A	Del_6p25.3	0.372	1
PRX	Del_6p25.3	0.372	1
Amp_1q22	Del_6p25.3	0.372	1
ARID2	ZBTB20	0.373	1
ATRX	Del_6p25.3	0.373	1
KRT3	Del_4q34.3	0.373	1
MYT1	11p-Del	0.373	1
NRAS	Del_4q34.3	0.373	1
NUDT11	ZBTB20	0.373	1
RBBP6	11p-Del	0.373	1
ZNF709	Del_4q34.3	0.373	1
11p-Del	Xq-Del	0.373	1
4p-Del	Del_7p22.3	0.373	1
CIC	PPL	0.374	1
TCF12	Del_1p32.3	0.374	1
IRS4	Amp_7q31.2	0.375	1
RBPJ	Amp_7q31.2	0.375	1
SMARCA4	Del_9p21.3	0.375	1
ANKRD36	6q-Del	0.376	1
CREBZF	6q-Del	0.376	1
IRS4	6q-Del	0.376	1
NF1	RET	0.376	1
12q-Del	Del_6q22.31	0.376	1
13q-Del	Del_3q13.31	0.376	1
6q-Del	Amp_2p24.3	0.376	1
6q-Del	Amp_17q25.1	0.376	1
6q-Del	Del_3q29	0.376	1
Amp_7q32.3	Del_7p22.3	0.376	1
Del_3q13.31	Del_6q22.31	0.376	1
PIK3CA	15q-Del	0.377	1
9p-Del	Del_18q23	0.377	1
Del_13q14.2	Del_18q23	0.377	1
ARID2	7p-Amp	0.378	1
KRT3	10q-Del	0.378	1
PLXNA3	SMARCA4	0.378	1
PLXNA3	18q-Del	0.378	1
SLC6A3	10p-Amp	0.378	1
SMARCA4	TNRC18	0.378	1
SMARCA4	ZMIZ1	0.378	1
SMARCA4	Del_2q37.3	0.378	1
7p-Amp	Del_7p22.3	0.378	1
18q-Del	Xp-Del	0.378	1
22q-Del	Xp-Del	0.378	1
CIC	18p-Del	0.379	1
14q-Del	4q-Del	0.379	1
Amp_7q31.2	Amp_Xp11.22	0.379	1
ARID1A	EGFR	0.38	1
EGFR	Amp_4q12	0.38	1
ROBO3	Del_19q13.42	0.38	1
SMOC1	Del_19q13.41	0.38	1
Amp_17q25.1	Del_4q34.3	0.38	1
MYT1	Del_22q13.31	0.381	1
RB1	Del_18q23	0.381	1
TCF12	Del_1p36.32	0.381	1
TRERF1	Del_18q23	0.381	1
9q-Del	Del_1p36.32	0.381	1
Xq-Del	Del_22q13.31	0.381	1
12q-Del	Amp_1q32.1	0.382	1
FAM47C	Del_1p32.3	0.383	1
MED9	Del_14q24.3	0.384	1
TCF12	11q-Amp	0.384	1
11q-Amp	15q-Del	0.384	1
AGBL1	Del_6q22.31	0.385	1
BRAF	FUBP1	0.385	1
DDX5	FUBP1	0.385	1
DNMT3A	PTEN	0.385	1
FUBP1	ROBO3	0.385	1
NEU2	Del_6q22.31	0.385	1
PDGFRA	PTEN	0.385	1
PDGFRA	Del_5p15.33	0.385	1
PRX	Del_3p21.31	0.385	1
PRX	Del_5p15.33	0.385	1
PTEN	SETD2	0.385	1
PTEN	18p-Del	0.385	1
ROBO3	Del_6q22.31	0.385	1
SETD2	Amp_12q14.1	0.385	1
STK19	Amp_12q14.1	0.385	1
STK19	Del_3p21.31	0.385	1
TP53	Amp_7q31.2	0.385	1
ZNF512B	Del_6q22.31	0.385	1
19p-Amp	Del_3q29	0.385	1
18p-Del	Amp_12q14.1	0.385	1
4p-Del	Amp_12p13.32	0.385	1
Amp_1q22	Amp_12q14.1	0.385	1
Amp_3q26.33	Amp_17q25.1	0.385	1
Amp_3q26.33	Del_5q34	0.385	1
Amp_Xp11.22	Del_3q29	0.385	1
Del_3q13.31	Del_11p15.1	0.386	1
MYST4	PIK3R1	0.387	1
PIK3R1	Amp_13q34	0.387	1
Amp_Xp11.22	Del_4q34.3	0.387	1
10p-Amp	22q-Del	0.388	1
13q-Del	Del_1p36.32	0.388	1
18q-Del	22q-Del	0.388	1
TRERF1	14q-Del	0.389	1
14q-Del	Xq-Del	0.389	1
GAGE2A	Del_9p23	0.39	1
Del_9p21.3	Del_18q23	0.39	1
AGBL1	Del_11p15.1	0.391	1
HTRA2	Del_11p15.1	0.391	1
RET	Del_10q26.3	0.391	1
7p-Amp	Amp_4q12	0.391	1
10q-Del	Del_3q29	0.391	1
14q-Del	Amp_1q32.1	0.391	1
Amp_2p24.3	Del_10q26.3	0.391	1
15q-Del	Del_14q24.3	0.392	1
9q-Del	Del_14q24.3	0.392	1
SMOC1	7q-Amp	0.393	1
TMEM216	7q-Amp	0.393	1
TMEM216	Amp_7p11.2	0.393	1
ANKRD36	EGFR	0.394	1
ARID1A	Amp_10p15.3	0.394	1
EGFR	IRS4	0.394	1
EGFR	RBPJ	0.394	1
FAM47C	11p-Del	0.394	1
11q-Amp	Amp_7q32.3	0.394	1
Amp_7q32.3	Del_8q24.3	0.394	1
CIB1	7p-Amp	0.395	1
SRPX	7p-Amp	0.395	1
CIB1	19q-Del	0.397	1
NAP1L2	19q-Del	0.397	1
NRAS	19q-Del	0.397	1
SRPX	19q-Del	0.397	1
Del_2q37.3	Del_8q24.3	0.397	1
CUL4B	Amp_19p13.3	0.398	1
DNMT3A	Amp_19p13.3	0.398	1
FAM47C	Del_11p15.5	0.398	1
PLXNA3	Del_14q24.3	0.398	1
PRX	8q-Amp	0.398	1
SETD2	Amp_19p13.3	0.398	1
STK19	8q-Amp	0.398	1
STK19	Amp_19p13.3	0.398	1
8q-Amp	Amp_1q22	0.398	1
Amp_1q22	Amp_19p13.3	0.398	1
4p-Del	Amp_Xp11.22	0.4	1
Amp_Xp11.22	Del_10q26.3	0.4	1
ARID2	Del_6p25.3	0.401	1
NUDT11	Del_6p25.3	0.401	1
PLXNA3	18p-Del	0.401	1
PLXNA3	Amp_11q24.1	0.401	1
TNRC18	4q-Del	0.401	1
TNRC18	Amp_11q24.1	0.401	1
9p-Del	Amp_8q24.13	0.401	1
Xp-Del	Amp_11q24.1	0.401	1
Del_6p25.3	Del_7p22.3	0.401	1
Del_2q37.3	Del_12q12	0.402	1
Del_6q22.31	Del_19q13.41	0.402	1
CIC	Del_4q34.3	0.403	1
IRS4	Amp_10p15.3	0.403	1
RBPJ	Amp_10p15.3	0.403	1
SMOC1	Del_19q13.42	0.403	1
TCF12	Amp_1q32.1	0.403	1
15q-Del	Amp_1q32.1	0.403	1
CIB1	Del_1p32.3	0.404	1
EMG1	NOTCH1	0.404	1
MYT1	NOTCH1	0.404	1
NAP1L2	Del_1p32.3	0.404	1
NEU2	Del_6q24.3	0.404	1
NOTCH1	RB1	0.404	1
NOTCH1	RBBP6	0.404	1
NOTCH1	TRERF1	0.404	1
ROBO3	Del_6q24.3	0.404	1
SRPX	Del_1p32.3	0.404	1
ZNF512B	Del_6q24.3	0.404	1
18p-Del	Amp_7q31.2	0.404	1
EGFR	Amp_17q25.1	0.405	1
8q-Amp	4q-Del	0.405	1
Amp_11q24.1	Amp_19p13.3	0.405	1
CUL4B	Del_9p21.3	0.406	1
PRX	Del_9p21.3	0.406	1
STK19	Del_9p21.3	0.406	1
NAP1L2	Del_1p36.32	0.407	1
NIPBL	Del_18q23	0.407	1
SRPX	Del_1p36.32	0.407	1
22q-Del	Del_12q12	0.407	1
Del_3q13.31	Del_6q24.3	0.407	1
CIC	13q-Del	0.408	1
PIK3CA	11q-Amp	0.409	1
7q-Amp	9q-Del	0.409	1
15q-Del	Amp_7p11.2	0.409	1
CUL4B	SMARCA4	0.41	1
CUL4B	10p-Amp	0.41	1
CUL4B	18q-Del	0.41	1
DNMT3A	SMARCA4	0.41	1
DNMT3A	10p-Amp	0.41	1
DNMT3A	18q-Del	0.41	1
FUBP1	9q-Del	0.41	1
FUBP1	Amp_19p13.3	0.41	1
PDGFRA	SMARCA4	0.41	1
PDGFRA	10p-Amp	0.41	1
PRX	SMARCA4	0.41	1
PRX	10p-Amp	0.41	1
PRX	22q-Del	0.41	1
SETD2	SMARCA4	0.41	1
SMARCA4	STK19	0.41	1
STK19	18q-Del	0.41	1
13q-Del	15q-Del	0.41	1
15q-Del	Del_6q22.31	0.41	1
9q-Del	Del_6q22.31	0.41	1
NOTCH1	4q-Del	0.411	1
TNRC18	7q-Amp	0.411	1
TNRC18	Amp_7p11.2	0.411	1
ZMIZ1	Amp_7p11.2	0.411	1
EMG1	Del_2q37.3	0.412	1
RB1	Del_2q37.3	0.412	1
TRERF1	Del_2q37.3	0.412	1
22q-Del	Amp_7q32.3	0.412	1
Xq-Del	Del_2q37.3	0.412	1
Xq-Del	Del_9p21.3	0.412	1
ARID2	PTEN	0.415	1
ARID2	Amp_12q14.1	0.415	1
MYST4	Del_5p15.33	0.415	1
NUDT11	PTEN	0.415	1
NUDT11	Del_3p21.31	0.415	1
Amp_13q34	Del_5p15.33	0.415	1
CIB1	Del_11p15.5	0.416	1
CUL4B	Del_19q13.41	0.416	1
KRT3	Del_11p15.5	0.416	1
NRAS	Del_11p15.5	0.416	1
SRPX	Del_11p15.5	0.416	1
Amp_4q12	Del_3q13.31	0.416	1
ANKRD36	Amp_7q32.3	0.418	1
ATRX	NUDT11	0.418	1
IRS4	Amp_7q32.3	0.418	1
RBPJ	Amp_7q32.3	0.418	1
SMOC1	Del_9p23	0.418	1
Amp_7q32.3	Del_1q43	0.418	1
ARID2	Del_13q14.2	0.419	1
ATRX	MYT1	0.419	1
MYST4	Del_13q14.2	0.419	1
Amp_7q31.2	Del_18q23	0.419	1
IRS4	11p-Del	0.42	1
PIK3CA	PPL	0.42	1
PIK3CA	RB1	0.42	1
PIK3CA	SCN4A	0.42	1
PIK3R1	Del_14q24.3	0.42	1
11p-Del	Amp_2p24.3	0.42	1
11p-Del	Del_1q43	0.42	1
CIB1	Del_13q14.2	0.421	1
NAP1L2	9p-Del	0.421	1
NIPBL	9q-Del	0.421	1
NRAS	9p-Del	0.421	1
NRAS	Del_13q14.2	0.421	1
SRPX	9p-Del	0.421	1
TCF12	Amp_19p13.2	0.421	1
15q-Del	Amp_19p13.2	0.421	1
ARID2	CIC	0.422	1
CUL4B	Del_12q12	0.422	1
FAM47C	Amp_7q31.2	0.422	1
NIPBL	Amp_7q31.2	0.422	1
SETD2	Del_12q12	0.422	1
NF1	PIK3R1	0.424	1
PIK3R1	6q-Del	0.424	1
Del_5p15.33	Del_6q24.3	0.424	1
IDH2	7p-Amp	0.425	1
ZBTB20	Del_Xq21.1	0.425	1
4p-Del	Del_Xq21.1	0.425	1
NUDT11	8q-Amp	0.428	1
NUDT11	Amp_19p13.3	0.428	1
8q-Amp	Amp_13q34	0.428	1
18q-Del	Del_13q14.2	0.428	1
ANKRD36	Del_18q23	0.429	1
ANKRD36	Del_22q13.31	0.429	1
CREBZF	Del_18q23	0.429	1
IRS4	Del_18q23	0.429	1
IRS4	Del_22q13.31	0.429	1
PTPN11	Del_22q13.31	0.429	1
RBPJ	Del_18q23	0.429	1
RET	Del_1p36.32	0.429	1
RET	Del_18q23	0.429	1
TP53	Del_22q13.31	0.429	1
Amp_2p24.3	Del_18q23	0.429	1
Amp_10p15.3	Del_6q22.31	0.429	1
BRAF	10p-Del	0.43	1
IDH1	PIK3R1	0.431	1
Amp_7p11.2	Amp_11q24.1	0.431	1
Amp_12p13.32	Del_6p25.3	0.431	1
Del_4q34.3	Del_22q13.31	0.431	1
13q-Del	Amp_7p11.2	0.432	1
12q-Del	Del_3q29	0.433	1
CUL4B	18p-Del	0.434	1
DNMT3A	18p-Del	0.434	1
PDGFRA	4q-Del	0.434	1
PRX	4q-Del	0.434	1
STK19	18p-Del	0.434	1
4q-Del	Amp_1q22	0.434	1
Amp_1q22	Amp_11q24.1	0.434	1
ARID1A	Del_18q23	0.435	1
Amp_7q32.3	Amp_Xp11.22	0.435	1
Del_6q24.3	Del_19q13.41	0.435	1
Del_8q24.3	Del_14q24.3	0.435	1
AGBL1	Amp_8q24.13	0.436	1
DDX5	Amp_8q24.13	0.436	1
FUBP1	18q-Del	0.436	1
HTRA2	Amp_8q24.13	0.436	1
10p-Amp	Del_6q22.31	0.436	1
13q-Del	18q-Del	0.436	1
18q-Del	Del_6q22.31	0.436	1
ANKRD36	14q-Del	0.437	1
IRS4	14q-Del	0.437	1
14q-Del	Del_1q43	0.437	1
19q-Del	Amp_19p13.3	0.437	1
ARID1A	TCF12	0.439	1
TCF12	Amp_4q12	0.439	1
PIK3CA	Del_18q23	0.44	1
ARID2	SMARCA4	0.441	1
ARID2	10p-Amp	0.441	1
ARID2	22q-Del	0.441	1
CUL4B	Del_1p36.32	0.441	1
MYST4	SMARCA4	0.441	1
MYST4	18q-Del	0.441	1
NUDT11	10p-Amp	0.441	1
PIK3R1	Amp_7p11.2	0.441	1
10p-Amp	Amp_13q34	0.441	1
13q-Del	Del_6q22.31	0.441	1
18q-Del	Amp_13q34	0.441	1
22q-Del	Del_7p22.3	0.441	1
AGBL1	Del_4q34.3	0.442	1
DDX5	Del_4q34.3	0.442	1
EMG1	FUBP1	0.442	1
EMG1	13q-Del	0.442	1
FUBP1	MYT1	0.442	1
FUBP1	RB1	0.442	1
FUBP1	TRERF1	0.442	1
HTRA2	Del_4q34.3	0.442	1
MYT1	13q-Del	0.442	1
RB1	Del_6q22.31	0.442	1
SCN4A	Del_6q22.31	0.442	1
ZNF512B	Del_4q34.3	0.442	1
13q-Del	Xq-Del	0.442	1
15q-Del	Del_6q24.3	0.442	1
9q-Del	Del_6q24.3	0.442	1
19p-Amp	Del_5p15.33	0.443	1
13q-Del	Del_8q24.3	0.443	1
Amp_3q26.33	Del_5p15.33	0.443	1
PLXNA3	Amp_12p13.32	0.445	1
TNRC18	Amp_12p13.32	0.445	1
4q-Del	Del_12q12	0.445	1
Xp-Del	Amp_12p13.32	0.445	1
GAGE2A	Amp_10p15.3	0.446	1
10p-Del	Del_3q13.31	0.447	1
BRAF	10q-Del	0.448	1
CIC	Del_18q23	0.448	1
11p-Del	Amp_17q25.1	0.448	1
14q-Del	Amp_4q12	0.448	1
MYT1	Del_11p15.1	0.449	1
RBBP6	Del_11p15.1	0.449	1
12q-Del	4p-Del	0.449	1
4p-Del	Del_3q13.31	0.449	1
Xq-Del	Del_11p15.1	0.449	1
Amp_12p13.32	Del_18q23	0.45	1
GAGE2A	Del_19q13.41	0.452	1
Amp_7q31.2	Del_5p15.33	0.452	1
CUL4B	Del_14q24.3	0.453	1
SETD2	Del_14q24.3	0.453	1
Amp_1q22	Del_14q24.3	0.453	1
Amp_12p13.32	Amp_12q14.1	0.453	1
NOTCH1	RET	0.454	1
NOTCH1	Amp_2p24.3	0.454	1
NOTCH1	Del_1q43	0.454	1
NUDT11	Del_12q12	0.454	1
SMOC1	Amp_7q31.2	0.454	1
TMEM216	Amp_7q31.2	0.454	1
14q-Del	Del_4q34.3	0.454	1
Amp_19p13.3	Del_1p32.3	0.454	1
NF1	SLC6A3	0.455	1
NF1	Xp-Del	0.455	1
PLXNA3	6q-Del	0.455	1
ZMIZ1	6q-Del	0.455	1
11q-Amp	Del_11p15.1	0.455	1
CIC	IRS4	0.456	1
CIC	RET	0.456	1
15q-Del	Del_5q34	0.456	1
15q-Del	Del_9p21.3	0.456	1
9q-Del	Amp_17q25.1	0.456	1
CUL4B	Del_19q13.42	0.457	1
8q-Amp	Amp_3q26.33	0.457	1
12q-Del	Amp_8q24.13	0.457	1
Amp_3q26.33	Del_11p15.5	0.457	1
7p-Amp	4p-Del	0.458	1
NUDT11	1p-Del	0.459	1
ARID1A	Del_8q24.3	0.46	1
Del_6q22.31	Del_11p15.1	0.46	1
15q-Del	Del_9p23	0.461	1
Amp_8q24.13	Del_6p25.3	0.461	1
Amp_11q24.1	Del_9p21.3	0.461	1
Del_4q34.3	Del_14q24.3	0.461	1
FAM47C	Amp_1q32.1	0.462	1
FUBP1	Del_12q12	0.462	1
IRS4	Del_2q37.3	0.462	1
NIPBL	Amp_1q32.1	0.462	1
Del_1q43	Del_2q37.3	0.462	1
Del_6q22.31	Del_12q12	0.462	1
NUDT11	TP53	0.463	1
SCN4A	Del_6q24.3	0.463	1
18p-Del	Amp_11q24.1	0.464	1
PIK3R1	12q-Del	0.465	1
4p-Del	Del_9p23	0.465	1
ARID2	4q-Del	0.466	1
ARID2	Amp_11q24.1	0.466	1
MED9	Del_10q26.3	0.466	1
MYST4	18p-Del	0.466	1
MYST4	4q-Del	0.466	1
MYST4	Amp_11q24.1	0.466	1
NUDT11	4q-Del	0.466	1
TNRC18	TP53	0.466	1
18p-Del	Amp_13q34	0.466	1
4q-Del	Del_7p22.3	0.466	1
9p-Del	Amp_Xp11.22	0.466	1
Amp_11q24.1	Del_7p22.3	0.466	1
Amp_Xp11.22	Del_13q14.2	0.466	1
Del_2q37.3	Del_14q24.3	0.466	1
BRAF	7p-Amp	0.467	1
DDX5	7p-Amp	0.467	1
HTRA2	7p-Amp	0.467	1
IDH1	SMOC1	0.467	1
ZNF512B	7p-Amp	0.467	1
12q-Del	Del_4q34.3	0.467	1
Amp_4q12	Amp_7q31.2	0.467	1
Del_3q13.31	Del_4q34.3	0.467	1
DNMT3A	7q-Amp	0.468	1
NF1	Del_9p23	0.468	1
PDGFRA	Amp_7p11.2	0.468	1
PRX	7q-Amp	0.468	1
SETD2	7q-Amp	0.468	1
7q-Amp	Amp_1q22	0.468	1
Amp_1q22	Amp_7p11.2	0.468	1
CIC	ZBTB20	0.469	1
NOTCH1	7q-Amp	0.469	1
IRS4	PIK3CA	0.47	1
PIK3CA	PTPN11	0.47	1
PIK3CA	RET	0.47	1
SMARCA4	19p-Amp	0.47	1
SMARCA4	Amp_Xp11.22	0.47	1
TP53	Del_1q43	0.47	1
22q-Del	Amp_3q26.33	0.47	1
22q-Del	Amp_Xp11.22	0.47	1
6q-Del	Del_3p21.31	0.47	1
Del_5p15.33	Del_Xq21.1	0.47	1
NF1	Del_18q23	0.471	1
NIPBL	PIK3CA	0.471	1
6q-Del	Del_18q23	0.471	1
GAGE2A	1p-Del	0.473	1
GAGE2A	Del_22q13.31	0.473	1
TCF12	4p-Del	0.473	1
ZBTB20	15q-Del	0.473	1
11p-Del	Del_6q22.31	0.473	1
4p-Del	9q-Del	0.473	1
ARID2	Del_9p21.3	0.474	1
DDX5	TP53	0.474	1
HTRA2	TP53	0.474	1
NEU2	TP53	0.474	1
11p-Del	4p-Del	0.474	1
Del_13q14.2	Del_19q13.41	0.474	1
EGFR	SLC6A3	0.475	1
EGFR	TNRC18	0.475	1
EGFR	ZMIZ1	0.475	1
EGFR	Xp-Del	0.475	1
8q-Amp	Amp_12p13.32	0.475	1
Amp_1q32.1	Del_6q22.31	0.476	1
Amp_11q24.1	Del_11p15.5	0.476	1
NRAS	Del_14q24.3	0.477	1
10q-Del	Del_3q13.31	0.477	1
Amp_1q32.1	Del_14q24.3	0.477	1
11q-Amp	Del_5q34	0.478	1
Del_1p36.32	Del_14q24.3	0.478	1
EGFR	Del_6p25.3	0.479	1
SMOC1	TP53	0.479	1
TMEM216	TP53	0.479	1
Amp_10p15.3	Del_6q24.3	0.479	1
DNMT3A	Amp_12p13.32	0.48	1
PDGFRA	Amp_12p13.32	0.48	1
PRX	Amp_12p13.32	0.48	1
SETD2	Amp_12p13.32	0.48	1
Amp_17q25.1	Del_13q14.2	0.48	1
FAM47C	NIPBL	0.482	1
FAM47C	Amp_19p13.2	0.482	1
7q-Amp	Amp_10p15.3	0.482	1
Amp_Xp11.22	Del_12q12	0.483	1
10p-Del	15q-Del	0.484	1
Amp_19p13.3	Del_Xq21.1	0.484	1
PLXNA3	Amp_10p15.3	0.485	1
SLC6A3	Amp_10p15.3	0.485	1
SMOC1	Amp_7q32.3	0.485	1
TMEM216	Amp_7q32.3	0.485	1
ATRX	Del_4q34.3	0.486	1
CIB1	7q-Amp	0.486	1
CIB1	Amp_7p11.2	0.486	1
KRT3	Amp_7p11.2	0.486	1
SRPX	7q-Amp	0.486	1
FUBP1	18p-Del	0.487	1
13q-Del	18p-Del	0.487	1
18p-Del	Del_6q22.31	0.487	1
GAGE2A	Del_19q13.42	0.489	1
AGBL1	Del_11p15.5	0.49	1
HTRA2	Del_11p15.5	0.49	1
6q-Del	Amp_7q32.3	0.49	1
CUL4B	6q-Del	0.491	1
DNMT3A	6q-Del	0.491	1
NF1	PDGFRA	0.491	1
NF1	STK19	0.491	1
NF1	Amp_1q22	0.491	1
PIK3R1	7p-Amp	0.491	1
PRX	6q-Del	0.491	1
10p-Del	Xq-Del	0.491	1
6q-Del	Amp_1q22	0.491	1
DDX5	1p-Del	0.492	1
FAM47C	Amp_7q32.3	0.492	1
NIPBL	Amp_7q32.3	0.492	1
TP53	Del_9p21.3	0.492	1
Amp_8q24.13	Del_9p21.3	0.492	1
Del_5p15.33	Del_14q24.3	0.492	1
Del_11p15.5	Del_14q24.3	0.492	1
Del_6q22.31	Del_19q13.42	0.493	1
ANKRD36	13q-Del	0.494	1
ATRX	CIB1	0.494	1
ATRX	KRT3	0.494	1
ATRX	NAP1L2	0.494	1
ATRX	ZNF709	0.494	1
CREBZF	Del_6q22.31	0.494	1
FUBP1	RBPJ	0.494	1
IRS4	13q-Del	0.494	1
PTPN11	13q-Del	0.494	1
RBPJ	13q-Del	0.494	1
RBPJ	Del_6q22.31	0.494	1
RET	13q-Del	0.494	1
13q-Del	Amp_2p24.3	0.494	1
13q-Del	Del_18q23	0.494	1
Amp_2p24.3	Del_6q22.31	0.494	1
Del_6q22.31	Del_18q23	0.494	1
PTEN	Del_3q13.31	0.495	1
TCF12	Amp_8q24.13	0.495	1
ZBTB20	Del_8q24.3	0.495	1
11q-Amp	4p-Del	0.495	1
12q-Del	Amp_12q14.1	0.495	1
BRAF	9p-Del	0.496	1
DDX5	9p-Del	0.496	1
EMG1	Del_19q13.41	0.496	1
PPL	Del_19q13.41	0.496	1
ROBO3	9p-Del	0.496	1
19p-Amp	Amp_11q24.1	0.496	1
7q-Amp	Del_4q34.3	0.496	1
Xq-Del	Del_19q13.41	0.496	1
Amp_11q24.1	Amp_Xp11.22	0.496	1
SMARCA4	Amp_12p13.32	0.497	1
IRS4	Del_9p21.3	0.498	1
MYT1	Amp_8q24.13	0.498	1
PPL	Amp_8q24.13	0.498	1
RBBP6	Amp_8q24.13	0.498	1
SMARCA4	Del_Xq21.1	0.498	1
TRERF1	Amp_8q24.13	0.498	1
22q-Del	Del_Xq21.1	0.498	1
Xq-Del	Amp_8q24.13	0.498	1
Del_1q43	Del_9p21.3	0.498	1
Amp_1q32.1	Del_5q34	0.499	1
NOTCH1	Del_4q34.3	0.5	1
ARID1A	FAM47C	0.501	1
ARID1A	Amp_19p13.2	0.501	1
Amp_4q12	Amp_19p13.2	0.501	1
Del_11p15.5	Del_Xq21.1	0.501	1
EGFR	Del_3p21.31	0.502	1
EGFR	Del_5p15.33	0.502	1
IRS4	Del_11p15.1	0.502	1
ZBTB20	14q-Del	0.502	1
Amp_2p24.3	Del_11p15.1	0.502	1
Amp_11q24.1	Del_11p15.1	0.502	1
Del_1q43	Del_11p15.1	0.502	1
MYT1	Del_4q34.3	0.504	1
PIK3R1	Del_9p23	0.504	1
RB1	Del_4q34.3	0.504	1
TCF12	Del_6p25.3	0.504	1
4p-Del	Del_11p15.5	0.504	1
Xq-Del	Del_4q34.3	0.504	1
IDH1	Del_13q14.2	0.505	1
TCF12	Del_4q34.3	0.505	1
Del_6q24.3	Del_12q12	0.506	1
11q-Amp	Del_9p23	0.507	1
12q-Del	Del_10q26.3	0.509	1
PDGFRA	Del_9p23	0.51	1
PRX	Del_9p23	0.51	1
STK19	Del_9p23	0.51	1
TNRC18	Amp_7q31.2	0.51	1
8q-Amp	12q-Del	0.51	1
8q-Amp	Del_3q13.31	0.51	1
12q-Del	Amp_19p13.3	0.51	1
Amp_19p13.3	Del_3q13.31	0.51	1
Del_13q14.2	Del_Xq21.1	0.51	1
CIC	MED9	0.511	1
CIC	TMEM216	0.511	1
NUDT11	19q-Del	0.511	1
PIK3R1	11q-Amp	0.511	1
PIK3R1	Del_8q24.3	0.511	1
10q-Del	Xq-Del	0.511	1
ANKRD36	IDH1	0.512	1
DNMT3A	EGFR	0.512	1
EGFR	PDGFRA	0.512	1
EGFR	Amp_1q22	0.512	1
EGFR	Del_18q23	0.513	1
NUDT11	Amp_12p13.32	0.513	1
KRT3	Del_9p23	0.514	1
NAP1L2	Del_9p23	0.514	1
NF1	10p-Amp	0.514	1
NRAS	Del_9p23	0.514	1
SRPX	Del_9p23	0.514	1
ZNF709	Del_9p23	0.514	1
18q-Del	6q-Del	0.514	1
FUBP1	14q-Del	0.515	1
10q-Del	15q-Del	0.515	1
10q-Del	Del_5p15.33	0.516	1
CREBZF	Del_6q24.3	0.517	1
GAGE2A	PIK3CA	0.517	1
RBPJ	Del_6q24.3	0.517	1
Amp_2p24.3	Del_6q24.3	0.517	1
GAGE2A	19q-Del	0.518	1
PTEN	Amp_10p15.3	0.518	1
Amp_10p15.3	Amp_12q14.1	0.518	1
FAM47C	Del_3q29	0.519	1
NIPBL	Del_11p15.1	0.519	1
Amp_17q25.1	Amp_19p13.2	0.519	1
Amp_19p13.2	Del_3q29	0.519	1
Del_6q24.3	Del_11p15.1	0.519	1
PTEN	TCF12	0.52	1
PTEN	9q-Del	0.52	1
8q-Amp	Del_9p21.3	0.52	1
10p-Del	Del_8q24.3	0.52	1
15q-Del	Del_3p21.31	0.52	1
15q-Del	Del_5p15.33	0.52	1
9q-Del	Amp_12q14.1	0.52	1
ARID2	7q-Amp	0.521	1
ARID2	Amp_7p11.2	0.521	1
ATRX	Amp_17q25.1	0.521	1
NUDT11	7q-Amp	0.521	1
Amp_7p11.2	Del_7p22.3	0.521	1
NUDT11	Del_19q13.41	0.522	1
PDGFRA	Amp_10p15.3	0.522	1
SETD2	Amp_10p15.3	0.522	1
NUDT11	Del_1p32.3	0.523	1
PIK3CA	7q-Amp	0.523	1
TNRC18	14q-Del	0.523	1
ZMIZ1	14q-Del	0.523	1
KRAS	1p-Del	0.524	1
SMARCA4	Del_3q13.31	0.524	1
10p-Amp	12q-Del	0.524	1
11p-Del	Del_6q24.3	0.524	1
12q-Del	22q-Del	0.524	1
18q-Del	Del_3q13.31	0.524	1
4q-Del	Del_Xq21.1	0.524	1
ARID2	6q-Del	0.525	1
MYST4	NF1	0.525	1
NF1	NUDT11	0.525	1
NF1	Del_7p22.3	0.525	1
6q-Del	Amp_13q34	0.525	1
IDH1	Amp_17q25.1	0.526	1
IDH1	Del_3q29	0.526	1
11q-Amp	Del_6p25.3	0.527	1
DDX5	19q-Del	0.528	1
GAGE2A	Del_1p32.3	0.528	1
HTRA2	19q-Del	0.528	1
NEU2	19q-Del	0.528	1
ROBO3	19q-Del	0.528	1
TP53	Amp_12q14.1	0.528	1
EMG1	Del_19q13.42	0.529	1
IDH2	PIK3CA	0.529	1
PLXNA3	Del_10q26.3	0.529	1
PPL	Del_19q13.42	0.529	1
Xq-Del	Del_19q13.42	0.529	1
EMG1	7p-Amp	0.53	1
PPL	7p-Amp	0.53	1
RBBP6	7p-Amp	0.53	1
SCN4A	7p-Amp	0.53	1
SMARCA4	Amp_7q31.2	0.53	1
TRERF1	7p-Amp	0.53	1
Del_6q24.3	Del_19q13.42	0.53	1
GAGE2A	Del_1p36.32	0.533	1
Amp_10p15.3	Del_18q23	0.533	1
Amp_12p13.32	Del_14q24.3	0.533	1
14q-Del	Del_19q13.41	0.535	1
15q-Del	Amp_19p13.3	0.535	1
6q-Del	Del_12q12	0.535	1
9q-Del	Amp_19p13.3	0.535	1
Amp_11q24.1	Del_19q13.41	0.535	1
DDX5	Del_1p32.3	0.536	1
ROBO3	Del_1p32.3	0.536	1
FAM47C	ZBTB20	0.537	1
FAM47C	Amp_7p11.2	0.537	1
NIPBL	ZBTB20	0.537	1
NIPBL	7q-Amp	0.537	1
NIPBL	Amp_7p11.2	0.537	1
PIK3R1	Del_11p15.5	0.537	1
ARID1A	IDH2	0.539	1
IDH1	MYST4	0.539	1
Amp_4q12	Amp_17q25.1	0.539	1
AGBL1	Del_1p36.32	0.54	1
DDX5	Del_1p36.32	0.54	1
ROBO3	Del_1p36.32	0.54	1
SMOC1	Del_9p21.3	0.54	1
TMEM216	Del_9p21.3	0.54	1
4p-Del	Del_9p21.3	0.54	1
FUBP1	GAGE2A	0.541	1
Amp_10p15.3	Amp_19p13.3	0.541	1
ATRX	RET	0.542	1
ATRX	Del_1q43	0.542	1
DNMT3A	11p-Del	0.542	1
NOTCH1	PLXNA3	0.542	1
NOTCH1	TNRC18	0.542	1
NOTCH1	ZMIZ1	0.542	1
SETD2	11p-Del	0.542	1
PTEN	Del_8q24.3	0.543	1
4p-Del	Del_2q37.3	0.543	1
Amp_12q14.1	Del_8q24.3	0.543	1
7p-Amp	15q-Del	0.544	1
ANKRD36	10p-Del	0.545	1
Amp_12p13.32	Amp_Xp11.22	0.545	1
EGFR	NUDT11	0.546	1
EGFR	18q-Del	0.547	1
11p-Del	9p-Del	0.547	1
6q-Del	Del_19q13.41	0.547	1
KRAS	19q-Del	0.548	1
PIK3R1	9p-Del	0.548	1
Amp_7q32.3	Del_6q24.3	0.548	1
GAGE2A	Del_11p15.1	0.549	1
SMARCA4	TCF12	0.549	1
TCF12	10p-Amp	0.549	1
10p-Amp	9q-Del	0.549	1
15q-Del	22q-Del	0.549	1
Amp_1q32.1	Del_6p25.3	0.549	1
SLC6A3	Del_2q37.3	0.55	1
ZMIZ1	Del_2q37.3	0.55	1
12q-Del	4q-Del	0.551	1
4q-Del	Del_3q13.31	0.551	1
Amp_11q24.1	Del_3q13.31	0.551	1
CREBZF	Amp_8q24.13	0.552	1
CUL4B	Del_18q23	0.552	1
DNMT3A	Del_18q23	0.552	1
IRS4	Amp_8q24.13	0.552	1
PDGFRA	Del_18q23	0.552	1
PRX	Del_22q13.31	0.552	1
STK19	Del_18q23	0.552	1
Amp_1q22	Del_18q23	0.552	1
Amp_2p24.3	Amp_8q24.13	0.552	1
Amp_7p11.2	Del_13q14.2	0.552	1
KRAS	Del_1p32.3	0.553	1
FAM47C	PIK3R1	0.554	1
SRPX	Amp_7q31.2	0.554	1
AGBL1	Del_14q24.3	0.555	1
HTRA2	Del_14q24.3	0.555	1
MYT1	Del_11p15.5	0.555	1
NEU2	Del_14q24.3	0.555	1
NF1	4q-Del	0.555	1
RBBP6	Del_11p15.5	0.555	1
ROBO3	Del_14q24.3	0.555	1
18p-Del	6q-Del	0.555	1
6q-Del	Amp_11q24.1	0.555	1
Xq-Del	Del_11p15.5	0.555	1
KRAS	Del_1p36.32	0.556	1
NF1	Amp_3q26.33	0.556	1
NF1	Amp_Xp11.22	0.556	1
6q-Del	Amp_Xp11.22	0.556	1
MYST4	Amp_10p15.3	0.557	1
NUDT11	Amp_10p15.3	0.557	1
4p-Del	Amp_4q12	0.557	1
11q-Amp	8q-Amp	0.558	1
11q-Amp	Amp_19p13.3	0.558	1
8q-Amp	Del_8q24.3	0.558	1
Amp_17q25.1	Del_3q29	0.558	1
ANKRD36	Del_4q34.3	0.559	1
CIB1	Del_19q13.41	0.559	1
NAP1L2	Del_19q13.41	0.559	1
NF1	Del_1p32.3	0.559	1
PIK3CA	PLXNA3	0.559	1
RET	Del_4q34.3	0.559	1
SRPX	Del_19q13.41	0.559	1
Amp_2p24.3	Del_4q34.3	0.559	1
Del_1q43	Del_4q34.3	0.559	1
SMARCA4	Del_14q24.3	0.56	1
TNRC18	Amp_7q32.3	0.56	1
CUL4B	14q-Del	0.561	1
DNMT3A	14q-Del	0.561	1
EMG1	9p-Del	0.561	1
EMG1	Del_13q14.2	0.561	1
MYT1	9p-Del	0.561	1
MYT1	Del_13q14.2	0.561	1
PDGFRA	14q-Del	0.561	1
RB1	9p-Del	0.561	1
SCN4A	9p-Del	0.561	1
TRERF1	9p-Del	0.561	1
TRERF1	Del_13q14.2	0.561	1
14q-Del	Amp_1q22	0.561	1
Xq-Del	Del_13q14.2	0.561	1
15q-Del	Del_12q12	0.563	1
Amp_12q14.1	Del_18q23	0.563	1
Del_3p21.31	Del_18q23	0.563	1
Del_5p15.33	Del_18q23	0.563	1
SLC6A3	1p-Del	0.564	1
BRAF	7q-Amp	0.565	1
BRAF	Amp_7p11.2	0.565	1
DDX5	Amp_7p11.2	0.565	1
HTRA2	7q-Amp	0.565	1
HTRA2	Amp_7p11.2	0.565	1
NEU2	7q-Amp	0.565	1
NUDT11	Del_19q13.42	0.565	1
ZNF512B	7q-Amp	0.565	1
ZNF512B	Amp_7p11.2	0.565	1
ANKRD36	10q-Del	0.566	1
FUBP1	Amp_17q25.1	0.566	1
10q-Del	Del_1q43	0.566	1
Del_3q29	Del_6q22.31	0.566	1
NAP1L2	Del_10q26.3	0.567	1
ZNF709	Del_10q26.3	0.567	1
7q-Amp	Del_18q23	0.567	1
7q-Amp	Del_22q13.31	0.567	1
Amp_7p11.2	Del_18q23	0.567	1
PIK3R1	Del_2q37.3	0.569	1
DNMT3A	Amp_7q31.2	0.571	1
PRX	Amp_7q31.2	0.571	1
SETD2	Amp_7q31.2	0.571	1
11p-Del	Amp_19p13.3	0.571	1
ATRX	Del_9p21.3	0.572	1
10p-Amp	11q-Amp	0.573	1
18q-Del	Del_8q24.3	0.573	1
22q-Del	Del_8q24.3	0.573	1
Amp_4q12	Del_6q24.3	0.573	1
ATRX	DNMT3A	0.574	1
ATRX	Amp_1q22	0.574	1
Amp_12p13.32	Del_Xq21.1	0.574	1
GAGE2A	Del_9p21.3	0.576	1
IDH2	ZBTB20	0.576	1
TCF12	4q-Del	0.576	1
TCF12	Amp_11q24.1	0.576	1
ZBTB20	Del_3q29	0.576	1
7q-Amp	Amp_4q12	0.576	1
14q-Del	19q-Del	0.576	1
15q-Del	4q-Del	0.576	1
15q-Del	Amp_11q24.1	0.576	1
4p-Del	Amp_17q25.1	0.576	1
4p-Del	Del_3q29	0.576	1
11p-Del	Del_7p22.3	0.577	1
14q-Del	Amp_12q14.1	0.577	1
14q-Del	Del_3p21.31	0.577	1
14q-Del	Del_5p15.33	0.577	1
Amp_17q25.1	Del_11p15.1	0.578	1
6q-Del	Amp_7q31.2	0.579	1
CUL4B	NOTCH1	0.58	1
NOTCH1	PDGFRA	0.58	1
NOTCH1	SETD2	0.58	1
Amp_12p13.32	Del_10q26.3	0.58	1
NOTCH1	Del_6p25.3	0.581	1
11q-Amp	7p-Amp	0.581	1
TCF12	Del_11p15.5	0.582	1
9q-Del	Del_11p15.5	0.582	1
Amp_7q31.2	Del_6q24.3	0.582	1
SMARCA4	7q-Amp	0.583	1
SMARCA4	Amp_7p11.2	0.583	1
10p-Amp	7q-Amp	0.583	1
10p-Amp	Amp_7p11.2	0.583	1
7q-Amp	18q-Del	0.583	1
18q-Del	Amp_7p11.2	0.583	1
FUBP1	TNRC18	0.584	1
FUBP1	ZMIZ1	0.584	1
PLXNA3	13q-Del	0.584	1
PLXNA3	Del_6q22.31	0.584	1
TNRC18	Del_6q22.31	0.584	1
ZMIZ1	Del_6q22.31	0.584	1
13q-Del	Xp-Del	0.584	1
CIB1	Del_19q13.42	0.585	1
NAP1L2	Del_19q13.42	0.585	1
SRPX	Del_19q13.42	0.585	1
ANKRD36	7p-Amp	0.586	1
FAM47C	Amp_12q14.1	0.586	1
FAM47C	Del_5p15.33	0.586	1
IRS4	7p-Amp	0.586	1
NIPBL	PTEN	0.586	1
NIPBL	Amp_12q14.1	0.586	1
RET	7p-Amp	0.586	1
7p-Amp	Amp_2p24.3	0.586	1
7p-Amp	Del_1q43	0.586	1
8q-Amp	Del_18q23	0.586	1
8q-Amp	Del_22q13.31	0.586	1
Amp_19p13.3	Del_18q23	0.586	1
Amp_19p13.2	Del_5p15.33	0.586	1
ARID2	Del_22q13.31	0.587	1
Del_8q24.3	Del_12q12	0.587	1
CIB1	Amp_7q32.3	0.588	1
SRPX	Amp_7q32.3	0.588	1
DNMT3A	Del_2q37.3	0.589	1
EGFR	18p-Del	0.589	1
NF1	7q-Amp	0.589	1
SETD2	Del_2q37.3	0.589	1
7p-Amp	Del_2q37.3	0.589	1
Amp_3q26.33	Amp_10p15.3	0.589	1
DNMT3A	TP53	0.59	1
PDGFRA	TP53	0.59	1
SETD2	Del_10q26.3	0.59	1
STK19	Del_10q26.3	0.59	1
Amp_19p13.2	Del_1p36.32	0.59	1
TCF12	Del_13q14.2	0.591	1
13q-Del	Amp_8q24.13	0.591	1
Amp_8q24.13	Del_6q22.31	0.591	1
ZMIZ1	Del_11p15.1	0.592	1
Del_12q12	Del_14q24.3	0.592	1
PIK3R1	Del_5q34	0.593	1
GAGE2A	10p-Del	0.594	1
Amp_17q25.1	Del_14q24.3	0.594	1
Del_5q34	Del_14q24.3	0.594	1
BRAF	Del_9p23	0.595	1
DDX5	Del_9p23	0.595	1
ROBO3	Del_9p23	0.595	1
ZNF512B	Del_9p23	0.595	1
PIK3CA	13q-Del	0.596	1
PIK3CA	Del_6q22.31	0.596	1
IDH1	MYT1	0.597	1
IDH1	PPL	0.597	1
IDH1	RBBP6	0.597	1
IDH1	SCN4A	0.597	1
IDH1	TRERF1	0.597	1
MYST4	14q-Del	0.597	1
14q-Del	Amp_13q34	0.597	1
PIK3CA	STK19	0.598	1
Del_9p21.3	Del_Xq21.1	0.598	1
11q-Amp	4q-Del	0.6	1
18p-Del	Del_8q24.3	0.6	1
4q-Del	Del_8q24.3	0.6	1
CIC	TNRC18	0.601	1
Amp_12p13.32	Del_3q13.31	0.601	1
NIPBL	Amp_19p13.3	0.602	1
PPL	1p-Del	0.602	1
Amp_17q25.1	Del_6q24.3	0.602	1
IDH1	KRAS	0.603	1
Amp_11q24.1	Del_19q13.42	0.603	1
NF1	13q-Del	0.604	1
NOTCH1	PTEN	0.605	1
NOTCH1	Del_3p21.31	0.605	1
Xp-Del	Del_19q13.42	0.605	1
Amp_10p15.3	Amp_11q24.1	0.605	1
Del_9p21.3	Del_12q12	0.605	1
4p-Del	Del_11p15.1	0.606	1
ARID1A	PTEN	0.607	1
ARID1A	Del_5p15.33	0.607	1
Amp_4q12	Del_3p21.31	0.607	1
PLXNA3	Del_6q24.3	0.608	1
TNRC18	Del_6q24.3	0.608	1
ZMIZ1	Del_6q24.3	0.608	1
18q-Del	Del_22q13.31	0.608	1
22q-Del	Del_18q23	0.608	1
11p-Del	Amp_3q26.33	0.609	1
13q-Del	19q-Del	0.609	1
Amp_1q32.1	Del_12q12	0.609	1
PIK3CA	Del_9p23	0.61	1
SLC6A3	19q-Del	0.61	1
7p-Amp	18q-Del	0.61	1
13q-Del	Amp_7q32.3	0.61	1
Amp_17q25.1	Del_6p25.3	0.61	1
IRS4	Del_11p15.5	0.611	1
Amp_2p24.3	Del_11p15.5	0.611	1
Del_1q43	Del_11p15.5	0.611	1
SMARCA4	Amp_7q32.3	0.612	1
Amp_8q24.13	Del_10q26.3	0.612	1
NF1	Del_3q13.31	0.613	1
8q-Amp	Del_9p23	0.613	1
12q-Del	6q-Del	0.613	1
6q-Del	Del_3q13.31	0.613	1
Amp_11q24.1	Del_4q34.3	0.613	1
IDH2	Amp_7p11.2	0.614	1
13q-Del	Del_19q13.42	0.614	1
ARID2	NOTCH1	0.615	1
CIC	ZNF709	0.615	1
GAGE2A	10q-Del	0.615	1
FAM47C	SMARCA4	0.616	1
SMARCA4	Amp_19p13.2	0.616	1
18q-Del	Amp_19p13.2	0.616	1
CREBZF	9p-Del	0.617	1
CREBZF	Del_13q14.2	0.617	1
IRS4	9p-Del	0.617	1
PTPN11	9p-Del	0.617	1
PTPN11	Del_13q14.2	0.617	1
14q-Del	Del_19q13.42	0.617	1
9p-Del	Del_1q43	0.617	1
Amp_2p24.3	Del_13q14.2	0.617	1
14q-Del	1p-Del	0.618	1
Amp_Xp11.22	Del_19q13.41	0.618	1
Amp_Xp11.22	Del_22q13.31	0.619	1
Del_2q37.3	Del_5p15.33	0.619	1
PIK3R1	Del_6q22.31	0.62	1
SLC6A3	Del_1p32.3	0.62	1
DNMT3A	Amp_7q32.3	0.621	1
PIK3R1	Del_10q26.3	0.621	1
SETD2	Amp_7q32.3	0.621	1
6q-Del	Del_19q13.42	0.621	1
ARID1A	Amp_19p13.3	0.622	1
SCN4A	Del_14q24.3	0.622	1
TRERF1	Del_14q24.3	0.622	1
CUL4B	13q-Del	0.623	1
CUL4B	Del_6q22.31	0.623	1
DNMT3A	Del_6q22.31	0.623	1
FUBP1	PDGFRA	0.623	1
FUBP1	STK19	0.623	1
FUBP1	Amp_1q22	0.623	1
PDGFRA	13q-Del	0.623	1
PDGFRA	Del_6q22.31	0.623	1
PRX	13q-Del	0.623	1
PRX	Del_6q22.31	0.623	1
SMARCA4	14q-Del	0.623	1
STK19	13q-Del	0.623	1
13q-Del	Amp_1q22	0.623	1
Amp_1q22	Del_6q22.31	0.623	1
MYST4	Del_2q37.3	0.624	1
SLC6A3	Del_1p36.32	0.624	1
FAM47C	IDH1	0.625	1
NOTCH1	11p-Del	0.625	1
7q-Amp	Del_11p15.1	0.625	1
ARID2	Amp_7q31.2	0.626	1
IDH2	Amp_12q14.1	0.626	1
IDH2	Del_3p21.31	0.626	1
NUDT11	Amp_7q31.2	0.626	1
PTEN	Del_3q29	0.626	1
PTEN	Del_5q34	0.626	1
Amp_17q25.1	Del_3p21.31	0.626	1
Del_3p21.31	Del_5q34	0.626	1
11q-Amp	9p-Del	0.627	1
Amp_8q24.13	Del_18q23	0.627	1
Del_10q26.3	Del_18q23	0.627	1
NF1	Del_13q14.2	0.628	1
14q-Del	Amp_Xp11.22	0.629	1
ZBTB20	Del_14q24.3	0.63	1
DNMT3A	Del_11p15.1	0.631	1
EMG1	TP53	0.631	1
PRX	Del_11p15.1	0.631	1
SCN4A	TP53	0.631	1
SETD2	Del_11p15.1	0.631	1
13q-Del	1p-Del	0.631	1
Amp_7q31.2	Del_6p25.3	0.631	1
PIK3R1	Del_11p15.1	0.632	1
ARID2	PIK3CA	0.633	1
ATRX	HTRA2	0.633	1
ATRX	NEU2	0.633	1
ATRX	ROBO3	0.633	1
EMG1	7q-Amp	0.633	1
EMG1	Amp_7p11.2	0.633	1
IDH1	Del_18q23	0.633	1
MYST4	PIK3CA	0.633	1
NUDT11	PIK3CA	0.633	1
PIK3CA	Amp_13q34	0.633	1
PIK3CA	Del_7p22.3	0.633	1
PPL	7q-Amp	0.633	1
PPL	Amp_7p11.2	0.633	1
RBBP6	7q-Amp	0.633	1
RBBP6	Amp_7p11.2	0.633	1
SCN4A	7q-Amp	0.633	1
SCN4A	Amp_7p11.2	0.633	1
TRERF1	7q-Amp	0.633	1
TRERF1	Amp_7p11.2	0.633	1
Xq-Del	Amp_7p11.2	0.633	1
Amp_11q24.1	Del_10q26.3	0.633	1
ARID1A	TP53	0.634	1
GAGE2A	7p-Amp	0.635	1
10q-Del	11p-Del	0.635	1
AGBL1	Amp_7q31.2	0.636	1
BRAF	Amp_7q31.2	0.636	1
ZNF512B	Amp_7q31.2	0.636	1
ATRX	Amp_4q12	0.637	1
Del_4q34.3	Del_10q26.3	0.637	1
ARID1A	Del_4q34.3	0.638	1
PLXNA3	10p-Del	0.638	1
TNRC18	10p-Del	0.638	1
10p-Del	Xp-Del	0.638	1
TCF12	6q-Del	0.639	1
11p-Del	Del_Xq21.1	0.639	1
6q-Del	9q-Del	0.639	1
Amp_19p13.3	Del_13q14.2	0.64	1
IDH2	Amp_19p13.3	0.641	1
TP53	Del_14q24.3	0.641	1
Amp_19p13.3	Del_5q34	0.641	1
IDH1	18q-Del	0.643	1
Del_3q13.31	Del_14q24.3	0.643	1
PLXNA3	Del_9p21.3	0.644	1
PTEN	ZBTB20	0.644	1
PTEN	4p-Del	0.644	1
TNRC18	Del_9p21.3	0.644	1
ZBTB20	Amp_12q14.1	0.644	1
18p-Del	Del_9p21.3	0.644	1
Xp-Del	Del_9p21.3	0.644	1
ARID2	Del_10q26.3	0.645	1
CIB1	Del_9p21.3	0.645	1
DNMT3A	1p-Del	0.645	1
FAM47C	4q-Del	0.645	1
NAP1L2	Del_9p21.3	0.645	1
NIPBL	4q-Del	0.645	1
NRAS	Del_9p21.3	0.645	1
SRPX	Del_9p21.3	0.645	1
TNRC18	Amp_8q24.13	0.645	1
ZMIZ1	Amp_8q24.13	0.645	1
7q-Amp	18p-Del	0.645	1
13q-Del	Del_6p25.3	0.645	1
13q-Del	Del_19q13.41	0.645	1
18p-Del	Amp_7p11.2	0.645	1
18p-Del	Amp_19p13.2	0.645	1
Amp_11q24.1	Amp_19p13.2	0.645	1
PIK3R1	Del_6p25.3	0.646	1
PPL	Del_1p32.3	0.646	1
12q-Del	Amp_10p15.3	0.646	1
CUL4B	Del_6q24.3	0.647	1
DNMT3A	Del_6q24.3	0.647	1
PRX	Del_6q24.3	0.647	1
SETD2	Del_6q24.3	0.647	1
PIK3CA	Del_6q24.3	0.648	1
ZBTB20	7q-Amp	0.648	1
4p-Del	Amp_7p11.2	0.648	1
BRAF	Del_10q26.3	0.649	1
HTRA2	Del_10q26.3	0.649	1
Del_18q23	Del_Xq21.1	0.649	1
Del_22q13.31	Del_Xq21.1	0.649	1
PPL	Del_1p36.32	0.65	1
RB1	Del_1p36.32	0.65	1
IDH1	13q-Del	0.651	1
Amp_7p11.2	Del_4q34.3	0.651	1
PLXNA3	Del_4q34.3	0.652	1
TNRC18	Del_4q34.3	0.652	1
12q-Del	Del_9p21.3	0.652	1
Xp-Del	Del_4q34.3	0.652	1
PIK3R1	Del_6q24.3	0.656	1
SMARCA4	Del_3q29	0.656	1
SMARCA4	Del_5q34	0.656	1
IDH2	Amp_8q24.13	0.657	1
Amp_3q26.33	Del_2q37.3	0.657	1
Amp_Xp11.22	Del_2q37.3	0.657	1
PIK3CA	11p-Del	0.658	1
ARID2	13q-Del	0.659	1
PLXNA3	10q-Del	0.659	1
TNRC18	10q-Del	0.659	1
ZBTB20	8q-Amp	0.659	1
10q-Del	Xp-Del	0.659	1
13q-Del	Amp_13q34	0.659	1
13q-Del	Del_7p22.3	0.659	1
4p-Del	Amp_19p13.3	0.659	1
Amp_13q34	Del_6q22.31	0.659	1
Amp_Xp11.22	Del_19q13.42	0.66	1
CIC	CUL4B	0.661	1
CIC	PDGFRA	0.661	1
NOTCH1	14q-Del	0.661	1
EMG1	Del_9p23	0.662	1
MYT1	Del_9p23	0.662	1
PIK3R1	PTEN	0.662	1
PIK3R1	Del_3p21.31	0.662	1
PPL	Del_9p23	0.662	1
RB1	Del_9p23	0.662	1
SCN4A	Del_9p23	0.662	1
TRERF1	Del_9p23	0.662	1
Amp_1q32.1	Del_13q14.2	0.662	1
7p-Amp	18p-Del	0.663	1
KRAS	Del_19q13.41	0.664	1
PIK3CA	19p-Amp	0.665	1
PIK3CA	Amp_3q26.33	0.665	1
18p-Del	Amp_4q12	0.665	1
Del_4q34.3	Del_6q24.3	0.666	1
DNMT3A	Del_19q13.41	0.667	1
GAGE2A	9p-Del	0.667	1
KRT3	TP53	0.667	1
MYST4	Del_11p15.1	0.667	1
NAP1L2	TP53	0.667	1
TP53	ZNF709	0.667	1
Del_7p22.3	Del_11p15.1	0.667	1
NF1	Amp_7q32.3	0.668	1
18q-Del	9p-Del	0.668	1
Amp_12q14.1	Del_6q22.31	0.669	1
AGBL1	Amp_7q32.3	0.67	1
BRAF	Amp_7q32.3	0.67	1
ZNF512B	Amp_7q32.3	0.67	1
Amp_17q25.1	Del_12q12	0.67	1
NOTCH1	Del_12q12	0.671	1
7q-Amp	Del_6q24.3	0.671	1
Amp_7q31.2	Amp_10p15.3	0.671	1
MED9	1p-Del	0.672	1
TCF12	Amp_10p15.3	0.672	1
TMEM216	1p-Del	0.672	1
9q-Del	Amp_10p15.3	0.672	1
7p-Amp	13q-Del	0.673	1
10p-Amp	4p-Del	0.674	1
22q-Del	4p-Del	0.674	1
Amp_1q32.1	Amp_12p13.32	0.674	1
ARID2	Amp_7q32.3	0.675	1
IDH1	SLC6A3	0.675	1
IDH1	ZMIZ1	0.675	1
NUDT11	Amp_7q32.3	0.675	1
PIK3CA	Amp_7q32.3	0.675	1
PIK3CA	Del_22q13.31	0.676	1
NOTCH1	Del_Xq21.1	0.677	1
PDGFRA	10p-Del	0.677	1
PIK3CA	SMARCA4	0.677	1
PIK3CA	22q-Del	0.677	1
PIK3R1	Amp_19p13.3	0.677	1
SETD2	10p-Del	0.677	1
10p-Del	Amp_1q22	0.677	1
10q-Del	Del_5q34	0.677	1
14q-Del	Del_2q37.3	0.677	1
Del_3q13.31	Del_18q23	0.677	1
ARID1A	7p-Amp	0.678	1
Amp_12q14.1	Del_6p25.3	0.678	1
Del_9p23	Del_12q12	0.678	1
SLC6A3	7p-Amp	0.679	1
Amp_2p24.3	Del_14q24.3	0.679	1
PIK3R1	7q-Amp	0.681	1
ATRX	Del_22q13.31	0.682	1
KRAS	Del_19q13.42	0.682	1
1p-Del	Amp_11q24.1	0.682	1
4q-Del	Amp_7q32.3	0.682	1
Amp_13q34	Del_6q24.3	0.682	1
Del_13q14.2	Del_19q13.42	0.683	1
PRX	Amp_8q24.13	0.684	1
STK19	Amp_8q24.13	0.684	1
ZBTB20	Amp_8q24.13	0.684	1
4q-Del	Amp_17q25.1	0.684	1
Amp_1q22	Amp_8q24.13	0.684	1
Amp_11q24.1	Del_5q34	0.684	1
6q-Del	Amp_1q32.1	0.685	1
PIK3CA	Del_13q14.2	0.686	1
12q-Del	14q-Del	0.686	1
Amp_7q32.3	Del_22q13.31	0.686	1
4p-Del	Del_12q12	0.688	1
ANKRD36	7q-Amp	0.689	1
ANKRD36	Amp_7p11.2	0.689	1
CUL4B	19q-Del	0.689	1
DDX5	IDH1	0.689	1
DNMT3A	19q-Del	0.689	1
IDH1	ZNF512B	0.689	1
IRS4	Amp_7p11.2	0.689	1
RET	7q-Amp	0.689	1
Amp_2p24.3	Amp_7p11.2	0.689	1
Amp_7p11.2	Del_1q43	0.689	1
PRX	Del_4q34.3	0.691	1
NOTCH1	18p-Del	0.692	1
NOTCH1	Amp_11q24.1	0.692	1
PIK3R1	SMARCA4	0.692	1
PIK3R1	22q-Del	0.692	1
TCF12	11p-Del	0.692	1
11p-Del	9q-Del	0.692	1
RET	1p-Del	0.693	1
1p-Del	Del_1q43	0.693	1
PTEN	Amp_12q14.1	0.694	1
PTEN	Del_3p21.31	0.694	1
PTEN	Del_5p15.33	0.694	1
ZBTB20	Del_4q34.3	0.694	1
Amp_12q14.1	Del_3p21.31	0.694	1
ARID2	TP53	0.696	1
MYST4	TP53	0.696	1
11q-Amp	Amp_10p15.3	0.696	1
AGBL1	CIC	0.697	1
AGBL1	Del_19q13.41	0.697	1
BRAF	CIC	0.697	1
CIC	DDX5	0.697	1
CIC	HTRA2	0.697	1
CIC	ROBO3	0.697	1
DDX5	Del_19q13.41	0.697	1
HTRA2	Del_19q13.41	0.697	1
MED9	19q-Del	0.697	1
NEU2	Del_19q13.41	0.697	1
PIK3CA	Del_12q12	0.697	1
TMEM216	19q-Del	0.697	1
7q-Amp	15q-Del	0.697	1
PDGFRA	10q-Del	0.698	1
SETD2	10q-Del	0.698	1
10q-Del	Amp_1q22	0.698	1
CUL4B	Del_1p32.3	0.699	1
DNMT3A	Del_1p32.3	0.699	1
PIK3R1	10p-Del	0.699	1
7p-Amp	Del_18q23	0.699	1
Amp_1q22	Del_1p32.3	0.699	1
12q-Del	Del_9p23	0.701	1
Amp_7q32.3	Del_6p25.3	0.701	1
Amp_17q25.1	Del_1p32.3	0.701	1
MED9	Del_1p32.3	0.702	1
TCF12	Del_18q23	0.702	1
TCF12	Del_22q13.31	0.702	1
TMEM216	Del_1p32.3	0.702	1
ZBTB20	Amp_11q24.1	0.702	1
15q-Del	Del_22q13.31	0.702	1
4p-Del	Amp_11q24.1	0.702	1
Del_19q13.41	Del_Xq21.1	0.702	1
DNMT3A	Del_1p36.32	0.703	1
EMG1	Amp_7q31.2	0.703	1
PPL	Amp_7q31.2	0.703	1
RBBP6	Amp_7q31.2	0.703	1
SCN4A	Amp_7q31.2	0.703	1
DNMT3A	Del_19q13.42	0.704	1
PDGFRA	Del_9p21.3	0.704	1
SETD2	Del_9p21.3	0.704	1
SLC6A3	Del_11p15.5	0.704	1
ZMIZ1	Del_11p15.5	0.704	1
ARID1A	Amp_7q31.2	0.705	1
TMEM216	Del_1p36.32	0.705	1
PIK3R1	Del_12q12	0.706	1
1p-Del	Del_14q24.3	0.706	1
Amp_17q25.1	Del_1p36.32	0.707	1
8q-Amp	Amp_12q14.1	0.709	1
PLXNA3	9p-Del	0.71	1
PLXNA3	Del_13q14.2	0.71	1
TNRC18	9p-Del	0.71	1
Xp-Del	Del_13q14.2	0.71	1
TCF12	14q-Del	0.711	1
ARID2	10p-Del	0.712	1
MYST4	10p-Del	0.712	1
NF1	Del_1p36.32	0.712	1
7q-Amp	Del_6p25.3	0.712	1
Amp_7p11.2	Del_6p25.3	0.712	1
14q-Del	Amp_7q32.3	0.713	1
Amp_Xp11.22	Del_6q24.3	0.714	1
ARID1A	Amp_12p13.32	0.715	1
1p-Del	Del_7p22.3	0.715	1
EMG1	Del_10q26.3	0.716	1
PPL	Del_10q26.3	0.716	1
RBBP6	Del_10q26.3	0.716	1
PDGFRA	7p-Amp	0.717	1
PIK3CA	Amp_11q24.1	0.717	1
7p-Amp	Amp_1q22	0.717	1
18p-Del	9p-Del	0.718	1
ARID2	Amp_8q24.13	0.719	1
PIK3R1	Amp_11q24.1	0.719	1
PTPN11	Del_9p23	0.719	1
RET	Del_9p23	0.719	1
Amp_7q31.2	Del_Xq21.1	0.719	1
Del_1q43	Del_9p23	0.719	1
ATRX	7q-Amp	0.72	1
PLXNA3	TP53	0.72	1
TP53	ZMIZ1	0.72	1
7q-Amp	11p-Del	0.72	1
FUBP1	Del_18q23	0.721	1
AGBL1	Del_19q13.42	0.722	1
DDX5	Del_19q13.42	0.722	1
HTRA2	Del_19q13.42	0.722	1
NEU2	Del_19q13.42	0.722	1
NOTCH1	Del_9p23	0.722	1
PIK3CA	Del_3q13.31	0.722	1
PTEN	10p-Amp	0.724	1
SMARCA4	Amp_12q14.1	0.724	1
10p-Amp	Amp_12q14.1	0.724	1
18q-Del	Amp_12q14.1	0.724	1
IDH1	Del_3p21.31	0.725	1
PIK3CA	Amp_7q31.2	0.725	1
TP53	7q-Amp	0.725	1
Del_8q24.3	Del_22q13.31	0.725	1
ARID1A	6q-Del	0.726	1
ARID2	Del_4q34.3	0.726	1
DDX5	Del_9p21.3	0.726	1
MYST4	Del_4q34.3	0.726	1
ROBO3	Del_9p21.3	0.726	1
ZNF512B	Del_9p21.3	0.726	1
Amp_13q34	Del_4q34.3	0.726	1
Del_4q34.3	Del_7p22.3	0.726	1
IDH1	18p-Del	0.727	1
RET	19q-Del	0.727	1
19q-Del	Del_1q43	0.727	1
GAGE2A	Del_14q24.3	0.728	1
Del_11p15.1	Del_Xq21.1	0.728	1
PIK3R1	10q-Del	0.729	1
7p-Amp	Del_6q24.3	0.729	1
NOTCH1	9q-Del	0.73	1
10p-Amp	Amp_7q31.2	0.731	1
11q-Amp	Amp_7p11.2	0.731	1
22q-Del	Amp_7q31.2	0.731	1
Del_6q22.31	Del_11p15.5	0.731	1
ARID2	10q-Del	0.732	1
MYST4	10q-Del	0.732	1
PTPN11	Del_1p32.3	0.735	1
RET	Del_1p32.3	0.735	1
11q-Amp	14q-Del	0.735	1
4q-Del	Del_6p25.3	0.735	1
Del_1p32.3	Del_1q43	0.735	1
Del_11p15.1	Del_18q23	0.735	1
ATRX	PLXNA3	0.736	1
ATRX	ZMIZ1	0.736	1
ATRX	Xp-Del	0.736	1
EMG1	Amp_7q32.3	0.736	1
PPL	Amp_7q32.3	0.736	1
SCN4A	Amp_7q32.3	0.736	1
TRERF1	Amp_7q32.3	0.736	1
KRAS	TP53	0.737	1
ATRX	Amp_3q26.33	0.738	1
GAGE2A	Amp_7p11.2	0.738	1
TCF12	Del_2q37.3	0.738	1
10p-Amp	Amp_19p13.3	0.738	1
11p-Del	Amp_1q32.1	0.738	1
15q-Del	Del_2q37.3	0.738	1
18q-Del	Amp_19p13.3	0.738	1
Del_1p36.32	Del_1q43	0.738	1
ATRX	SCN4A	0.74	1
Amp_7p11.2	Del_5p15.33	0.74	1
Amp_17q25.1	Del_11p15.5	0.741	1
Del_19q13.42	Del_Xq21.1	0.741	1
SETD2	Del_11p15.5	0.742	1
Del_4q34.3	Del_6p25.3	0.742	1
ATRX	TCF12	0.743	1
CIC	Amp_11q24.1	0.744	1
GAGE2A	IDH1	0.744	1
IDH2	NF1	0.744	1
NF1	Amp_17q25.1	0.744	1
18q-Del	Del_9p21.3	0.744	1
6q-Del	Del_5q34	0.744	1
10p-Del	Del_3p21.31	0.745	1
10p-Del	Del_5p15.33	0.745	1
Del_3p21.31	Del_19q13.41	0.745	1
SMARCA4	1p-Del	0.746	1
10p-Amp	Del_6q24.3	0.746	1
12q-Del	13q-Del	0.746	1
PIK3CA	9q-Del	0.747	1
CUL4B	9p-Del	0.748	1
CUL4B	Del_13q14.2	0.748	1
PRX	Del_13q14.2	0.748	1
STK19	Del_13q14.2	0.748	1
Amp_1q22	Del_13q14.2	0.748	1
PTEN	4q-Del	0.75	1
PTEN	Amp_11q24.1	0.75	1
18p-Del	Del_3p21.31	0.75	1
18p-Del	Del_5p15.33	0.75	1
4q-Del	Amp_12q14.1	0.75	1
Amp_3q26.33	Amp_8q24.13	0.75	1
Amp_11q24.1	Amp_12q14.1	0.75	1
Amp_11q24.1	Del_3p21.31	0.75	1
Amp_11q24.1	Del_5p15.33	0.75	1
NUDT11	7p-Amp	0.751	1
ZBTB20	Amp_12p13.32	0.751	1
14q-Del	Del_11p15.1	0.751	1
19q-Del	Amp_11q24.1	0.751	1
Amp_7q32.3	Del_6q22.31	0.751	1
RET	TP53	0.752	1
SMARCA4	18q-Del	0.752	1
8q-Amp	Del_12q12	0.752	1
Amp_11q24.1	Del_6q22.31	0.752	1
Amp_19p13.3	Del_12q12	0.752	1
NF1	Amp_7q31.2	0.753	1
NOTCH1	11q-Amp	0.753	1
Amp_7q32.3	Amp_10p15.3	0.754	1
MYST4	Del_9p21.3	0.755	1
Amp_8q24.13	Del_3p21.31	0.755	1
Amp_13q34	Del_9p21.3	0.755	1
19p-Amp	Del_4q34.3	0.756	1
Amp_3q26.33	Del_4q34.3	0.756	1
Amp_7p11.2	Del_6q22.31	0.757	1
ANKRD36	Amp_7q31.2	0.758	1
NIPBL	11p-Del	0.758	1
RET	Amp_7q31.2	0.758	1
11p-Del	Amp_19p13.2	0.758	1
Amp_7q31.2	Del_1q43	0.758	1
ARID1A	Amp_7q32.3	0.762	1
CIC	MYT1	0.762	1
CIC	RB1	0.762	1
CIC	TRERF1	0.762	1
ZBTB20	6q-Del	0.762	1
4p-Del	6q-Del	0.762	1
Amp_4q12	Amp_7q32.3	0.762	1
18p-Del	Del_11p15.1	0.763	1
PTEN	Del_4q34.3	0.764	1
7q-Amp	14q-Del	0.764	1
Del_1p32.3	Del_7p22.3	0.764	1
ATRX	MED9	0.765	1
EGFR	Del_5q34	0.765	1
18p-Del	Amp_19p13.3	0.765	1
4q-Del	Amp_19p13.3	0.765	1
Amp_7q32.3	Del_Xq21.1	0.765	1
Amp_11q24.1	Del_1p32.3	0.765	1
CIC	Del_13q14.2	0.766	1
10p-Amp	Del_12q12	0.766	1
Amp_19p13.2	Del_18q23	0.767	1
NOTCH1	13q-Del	0.769	1
PIK3CA	Del_8q24.3	0.769	1
TNRC18	Del_14q24.3	0.769	1
TP53	7p-Amp	0.769	1
ZMIZ1	Del_14q24.3	0.769	1
12q-Del	Del_6q24.3	0.769	1
Del_1p36.32	Del_7p22.3	0.769	1
ANKRD36	Del_10q26.3	0.77	1
FUBP1	TCF12	0.77	1
RBPJ	Del_10q26.3	0.77	1
TCF12	13q-Del	0.77	1
TCF12	Del_6q22.31	0.77	1
ZBTB20	Amp_7q31.2	0.771	1
7p-Amp	6q-Del	0.772	1
Amp_11q24.1	Del_1p36.32	0.772	1
10q-Del	Del_3p21.31	0.773	1
Amp_7q32.3	Del_11p15.1	0.773	1
KRT3	1p-Del	0.774	1
ZNF709	1p-Del	0.774	1
7q-Amp	6q-Del	0.774	1
4p-Del	9p-Del	0.774	1
6q-Del	Amp_7p11.2	0.774	1
MYST4	Del_11p15.5	0.775	1
Del_7p22.3	Del_11p15.5	0.775	1
14q-Del	Amp_19p13.2	0.776	1
PIK3R1	Del_9p21.3	0.777	1
NOTCH1	6q-Del	0.778	1
SLC6A3	7q-Amp	0.778	1
SLC6A3	Amp_7p11.2	0.778	1
TCF12	Del_11p15.1	0.778	1
10p-Amp	18p-Del	0.778	1
10p-Amp	Amp_11q24.1	0.778	1
7p-Amp	Del_6p25.3	0.778	1
15q-Del	Del_11p15.1	0.778	1
Xp-Del	Amp_7p11.2	0.778	1
MYST4	9p-Del	0.78	1
9p-Del	Amp_13q34	0.78	1
Del_7p22.3	Del_13q14.2	0.78	1
NOTCH1	Del_11p15.1	0.781	1
EGFR	ZBTB20	0.782	1
EGFR	4p-Del	0.782	1
NOTCH1	Del_14q24.3	0.782	1
Amp_7q32.3	Del_13q14.2	0.782	1
Del_6q24.3	Del_11p15.5	0.782	1
CIB1	IDH1	0.783	1
CIC	14q-Del	0.783	1
CIC	Del_14q24.3	0.783	1
IDH1	KRT3	0.783	1
IDH1	NAP1L2	0.783	1
Amp_11q24.1	Del_6q24.3	0.783	1
Amp_7q32.3	Del_14q24.3	0.784	1
IDH1	Amp_13q34	0.785	1
4q-Del	Amp_7q31.2	0.785	1
ARID1A	Del_22q13.31	0.786	1
Amp_4q12	Del_18q23	0.786	1
FUBP1	Del_4q34.3	0.787	1
Del_4q34.3	Del_6q22.31	0.787	1
Amp_7q31.2	Del_13q14.2	0.788	1
EMG1	Del_9p21.3	0.789	1
MYT1	Del_9p21.3	0.789	1
RB1	Del_9p21.3	0.789	1
RET	Amp_7q32.3	0.789	1
SCN4A	Del_9p21.3	0.789	1
13q-Del	Amp_7q31.2	0.791	1
Amp_7q31.2	Del_6q22.31	0.791	1
FUBP1	11q-Amp	0.792	1
TCF12	Del_6q24.3	0.792	1
15q-Del	Amp_7q31.2	0.792	1
4p-Del	Amp_10p15.3	0.792	1
NOTCH1	Amp_19p13.2	0.793	1
10p-Amp	Amp_7q32.3	0.793	1
10q-Del	Amp_10p15.3	0.793	1
Del_3p21.31	Del_19q13.42	0.793	1
ARID1A	14q-Del	0.794	1
AGBL1	TP53	0.796	1
1p-Del	Amp_17q25.1	0.796	1
KRT3	19q-Del	0.797	1
ZNF709	19q-Del	0.797	1
Amp_7q32.3	Amp_12p13.32	0.797	1
EGFR	PIK3R1	0.798	1
ATRX	11q-Amp	0.799	1
IDH1	Del_6q24.3	0.799	1
PIK3R1	Amp_7q31.2	0.799	1
7p-Amp	Del_5p15.33	0.799	1
ARID1A	ATRX	0.8	1
NF1	PIK3CA	0.8	1
PIK3CA	6q-Del	0.8	1
7q-Amp	Del_11p15.5	0.8	1
KRT3	Del_1p32.3	0.801	1
ZNF709	Del_1p32.3	0.801	1
11p-Del	Amp_7q32.3	0.801	1
Amp_7q32.3	Del_3q13.31	0.801	1
Amp_19p13.2	Del_2q37.3	0.801	1
Amp_8q24.13	Del_3q13.31	0.802	1
4q-Del	Amp_11q24.1	0.803	1
Amp_17q25.1	Del_22q13.31	0.803	1
Del_1p32.3	Del_13q14.2	0.803	1
ARID1A	Del_14q24.3	0.804	1
DNMT3A	Del_14q24.3	0.804	1
KRT3	Del_1p36.32	0.804	1
PDGFRA	Del_14q24.3	0.804	1
SMARCA4	19q-Del	0.804	1
STK19	Del_14q24.3	0.804	1
ZNF709	Del_1p36.32	0.804	1
Amp_4q12	Del_14q24.3	0.804	1
ATRX	PRX	0.805	1
MED9	Del_19q13.41	0.805	1
PLXNA3	Del_9p23	0.805	1
TMEM216	Del_19q13.41	0.805	1
TNRC18	Del_9p23	0.805	1
SLC6A3	Del_19q13.41	0.806	1
Xp-Del	Del_19q13.41	0.806	1
IDH1	NIPBL	0.807	1
NF1	Del_5p15.33	0.807	1
SETD2	TP53	0.807	1
6q-Del	Del_5p15.33	0.807	1
10p-Del	Del_18q23	0.808	1
FAM47C	PIK3CA	0.809	1
PIK3CA	Amp_19p13.2	0.809	1
PIK3CA	Del_11p15.1	0.809	1
IDH1	IRS4	0.81	1
IDH1	RBPJ	0.81	1
ZBTB20	11p-Del	0.81	1
Amp_7q31.2	Del_11p15.1	0.81	1
Amp_12p13.32	Amp_19p13.3	0.81	1
NOTCH1	Amp_4q12	0.811	1
14q-Del	Del_3q29	0.811	1
Amp_7p11.2	Del_6q24.3	0.811	1
NOTCH1	9p-Del	0.812	1
10p-Amp	10q-Del	0.812	1
13q-Del	Amp_1q32.1	0.812	1
Amp_8q24.13	Del_12q12	0.812	1
CIC	PTPN11	0.813	1
DNMT3A	Amp_7p11.2	0.813	1
PDGFRA	7q-Amp	0.813	1
10q-Del	Del_11p15.1	0.813	1
Del_1p36.32	Del_13q14.2	0.813	1
CIC	Amp_19p13.3	0.814	1
GAGE2A	Del_10q26.3	0.814	1
ARID1A	7q-Amp	0.816	1
ARID1A	Amp_7p11.2	0.816	1
SMARCA4	Del_1p32.3	0.816	1
IDH1	Del_3q13.31	0.817	1
PIK3CA	Del_14q24.3	0.817	1
Amp_12p13.32	Del_6q22.31	0.817	1
ARID1A	Del_2q37.3	0.818	1
TCF12	10p-Del	0.818	1
4p-Del	Del_22q13.31	0.818	1
Amp_4q12	Del_2q37.3	0.818	1
ATRX	PTPN11	0.819	1
Amp_1q32.1	Del_11p15.1	0.819	1
Amp_7p11.2	Del_2q37.3	0.819	1
6q-Del	Amp_19p13.3	0.82	1
MED9	Del_19q13.42	0.821	1
TMEM216	Del_19q13.42	0.821	1
ZBTB20	Amp_7q32.3	0.821	1
11p-Del	14q-Del	0.821	1
Del_18q23	Del_22q13.31	0.821	1
SMARCA4	Del_1p36.32	0.822	1
19p-Amp	Del_1p36.32	0.822	1
9q-Del	Amp_8q24.13	0.824	1
7p-Amp	Del_14q24.3	0.826	1
14q-Del	4p-Del	0.826	1
FAM47C	Del_9p23	0.827	1
IDH2	NOTCH1	0.827	1
Del_3q29	Del_14q24.3	0.827	1
FAM47C	13q-Del	0.83	1
FAM47C	Del_6q22.31	0.83	1
NIPBL	Del_6q22.31	0.83	1
15q-Del	Del_4q34.3	0.83	1
SLC6A3	Del_19q13.42	0.831	1
NF1	SMARCA4	0.832	1
PIK3CA	Del_11p15.5	0.832	1
TCF12	Amp_7q32.3	0.832	1
7p-Amp	Del_6q22.31	0.832	1
7q-Amp	4q-Del	0.832	1
15q-Del	Amp_7q32.3	0.832	1
Amp_1q32.1	Del_6q24.3	0.832	1
PIK3R1	Del_22q13.31	0.833	1
18q-Del	Del_9p23	0.833	1
MYST4	Del_14q24.3	0.834	1
NUDT11	Del_14q24.3	0.834	1
9p-Del	Del_Xq21.1	0.834	1
Amp_13q34	Del_14q24.3	0.834	1
TCF12	10q-Del	0.835	1
CUL4B	IDH1	0.836	1
IDH1	Amp_1q22	0.836	1
9p-Del	Amp_12q14.1	0.836	1
10q-Del	Del_18q23	0.837	1
Amp_19p13.2	Del_11p15.1	0.837	1
CUL4B	Del_9p23	0.838	1
RET	Del_9p21.3	0.838	1
CIC	SMARCA4	0.839	1
GAGE2A	TP53	0.839	1
PIK3CA	Amp_10p15.3	0.839	1
SLC6A3	Amp_7q31.2	0.839	1
6q-Del	Del_11p15.1	0.84	1
PIK3CA	Amp_17q25.1	0.841	1
PIK3CA	Del_5q34	0.841	1
NOTCH1	4p-Del	0.842	1
NUDT11	Amp_7p11.2	0.842	1
7q-Amp	Del_7p22.3	0.842	1
NF1	Del_12q12	0.844	1
11q-Amp	Amp_8q24.13	0.844	1
Amp_12p13.32	Del_6q24.3	0.844	1
AGBL1	1p-Del	0.845	1
HTRA2	1p-Del	0.845	1
NEU2	1p-Del	0.845	1
ROBO3	1p-Del	0.845	1
ZNF512B	1p-Del	0.845	1
7p-Amp	Del_11p15.1	0.845	1
18p-Del	Amp_12p13.32	0.845	1
9p-Del	Del_19q13.41	0.845	1
Amp_11q24.1	Amp_12p13.32	0.845	1
ARID1A	Del_6q22.31	0.846	1
PIK3R1	Amp_7q32.3	0.846	1
Amp_4q12	Del_6q22.31	0.846	1
Amp_19p13.3	Del_11p15.5	0.846	1
4p-Del	Del_14q24.3	0.848	1
NIPBL	Del_6q24.3	0.849	1
TNRC18	Del_10q26.3	0.849	1
11q-Amp	Del_4q34.3	0.849	1
EGFR	SMARCA4	0.85	1
Del_2q37.3	Del_19q13.42	0.85	1
PTEN	11p-Del	0.851	1
TCF12	7p-Amp	0.851	1
TNRC18	19q-Del	0.851	1
7p-Amp	11p-Del	0.851	1
7p-Amp	Del_12q12	0.851	1
NOTCH1	Del_18q23	0.853	1
8q-Amp	9p-Del	0.853	1
Amp_7q31.2	Del_19q13.41	0.854	1
EGFR	FUBP1	0.855	1
ATRX	SRPX	0.856	1
NF1	1p-Del	0.856	1
11p-Del	Amp_7q31.2	0.857	1
19q-Del	Del_13q14.2	0.858	1
Amp_7q32.3	Del_11p15.5	0.858	1
ATRX	MYST4	0.859	1
Amp_Xp11.22	Del_14q24.3	0.859	1
FAM47C	TP53	0.86	1
FUBP1	IDH2	0.861	1
IDH2	13q-Del	0.861	1
Amp_17q25.1	Del_6q22.31	0.861	1
SMARCA4	Del_11p15.5	0.862	1
Del_2q37.3	Del_18q23	0.863	1
AGBL1	19q-Del	0.864	1
ARID1A	Del_6q24.3	0.864	1
ZNF512B	19q-Del	0.864	1
MED9	TP53	0.865	1
MYST4	Del_9p23	0.865	1
SLC6A3	Amp_7q32.3	0.865	1
7p-Amp	4q-Del	0.865	1
Amp_13q34	Del_9p23	0.865	1
Amp_1q32.1	Del_4q34.3	0.866	1
RET	Del_19q13.41	0.867	1
Amp_2p24.3	Del_19q13.41	0.867	1
AGBL1	Del_1p32.3	0.868	1
CUL4B	1p-Del	0.868	1
HTRA2	Del_1p32.3	0.868	1
NEU2	Del_1p32.3	0.868	1
PDGFRA	1p-Del	0.868	1
PRX	1p-Del	0.868	1
SETD2	1p-Del	0.868	1
ZNF512B	Del_1p32.3	0.868	1
1p-Del	Amp_1q22	0.868	1
Amp_7q31.2	Amp_12p13.32	0.868	1
Del_1p36.32	Del_3p21.31	0.868	1
PDGFRA	Amp_7q31.2	0.869	1
Amp_10p15.3	Del_12q12	0.869	1
HTRA2	Del_1p36.32	0.87	1
IDH2	Del_9p23	0.87	1
NEU2	Del_1p36.32	0.87	1
ZNF512B	Del_1p36.32	0.87	1
15q-Del	Del_11p15.5	0.87	1
18p-Del	Del_9p23	0.87	1
EGFR	4q-Del	0.871	1
IDH1	Xq-Del	0.871	1
NIPBL	10p-Del	0.871	1
PIK3CA	Del_10q26.3	0.872	1
IDH1	MED9	0.873	1
IDH1	TMEM216	0.873	1
SMARCA4	11p-Del	0.873	1
Amp_7q31.2	Del_22q13.31	0.873	1
ZBTB20	Del_6q22.31	0.874	1
4p-Del	Del_6q22.31	0.874	1
TCF12	9p-Del	0.875	1
TP53	Del_18q23	0.876	1
IDH1	Del_8q24.3	0.877	1
7q-Amp	13q-Del	0.877	1
7q-Amp	Del_6q22.31	0.877	1
DNMT3A	Del_10q26.3	0.878	1
RBBP6	TP53	0.879	1
SMARCA4	Del_22q13.31	0.88	1
TP53	Del_10q26.3	0.88	1
ZBTB20	Del_11p15.1	0.88	1
10p-Amp	Del_18q23	0.88	1
FAM47C	Del_4q34.3	0.881	1
NIPBL	Del_4q34.3	0.881	1
Amp_19p13.2	Del_4q34.3	0.881	1
Del_14q24.3	Del_Xq21.1	0.881	1
ATRX	FAM47C	0.882	1
IDH1	PLXNA3	0.882	1
IDH1	Xp-Del	0.882	1
NIPBL	Del_10q26.3	0.883	1
CIC	PLXNA3	0.885	1
PRX	Del_19q13.42	0.885	1
PTEN	Del_2q37.3	0.885	1
RET	Del_19q13.42	0.885	1
Amp_2p24.3	Del_19q13.42	0.885	1
Amp_12q14.1	Del_2q37.3	0.885	1
NIPBL	10q-Del	0.886	1
KRT3	Del_19q13.41	0.887	1
ZNF709	Del_19q13.41	0.887	1
10p-Amp	14q-Del	0.887	1
ATRX	9q-Del	0.888	1
14q-Del	Amp_7q31.2	0.888	1
18p-Del	Del_11p15.5	0.889	1
NF1	Amp_12p13.32	0.89	1
NOTCH1	Del_2q37.3	0.89	1
PDGFRA	19q-Del	0.891	1
PIK3CA	Del_5p15.33	0.891	1
PRX	19q-Del	0.891	1
SETD2	19q-Del	0.891	1
ZBTB20	Del_6q24.3	0.891	1
11q-Amp	Del_13q14.2	0.891	1
19q-Del	Amp_1q22	0.891	1
4p-Del	Del_6q24.3	0.891	1
PDGFRA	Amp_7q32.3	0.892	1
11p-Del	18p-Del	0.892	1
RB1	1p-Del	0.893	1
6q-Del	Amp_8q24.13	0.893	1
IDH1	Amp_4q12	0.894	1
7q-Amp	Amp_12p13.32	0.894	1
Amp_11q24.1	Del_13q14.2	0.895	1
Amp_19p13.3	Del_2q37.3	0.895	1
NOTCH1	7p-Amp	0.896	1
PDGFRA	Del_1p32.3	0.896	1
PRX	Del_1p32.3	0.896	1
SETD2	Del_1p32.3	0.896	1
PDGFRA	Del_1p36.32	0.898	1
PRX	Del_1p36.32	0.898	1
SETD2	Del_1p36.32	0.898	1
STK19	Del_1p36.32	0.898	1
TP53	22q-Del	0.898	1
10p-Del	Del_5q34	0.898	1
18q-Del	Del_10q26.3	0.898	1
Amp_1q22	Del_1p36.32	0.898	1
KRT3	Del_19q13.42	0.899	1
NF1	Del_4q34.3	0.899	1
NOTCH1	10p-Amp	0.899	1
NOTCH1	18q-Del	0.899	1
ZNF709	Del_19q13.42	0.899	1
12q-Del	Del_14q24.3	0.899	1
6q-Del	Del_4q34.3	0.899	1
Amp_11q24.1	Del_22q13.31	0.899	1
NF1	19q-Del	0.9	1
ARID2	1p-Del	0.902	1
MYST4	Del_10q26.3	0.902	1
7q-Amp	Del_13q14.2	0.902	1
Amp_1q32.1	Del_11p15.5	0.902	1
Del_7p22.3	Del_10q26.3	0.902	1
14q-Del	Del_11p15.5	0.903	1
14q-Del	Amp_11q24.1	0.905	1
18q-Del	Del_2q37.3	0.905	1
ATRX	PIK3R1	0.907	1
FUBP1	PTEN	0.907	1
FUBP1	Del_3p21.31	0.907	1
IDH1	9q-Del	0.907	1
ARID2	Del_19q13.41	0.908	1
RB1	19q-Del	0.909	1
7p-Amp	Del_13q14.2	0.909	1
19q-Del	Xq-Del	0.909	1
CIC	PRX	0.91	1
CIC	SETD2	0.91	1
CIC	STK19	0.91	1
CIC	Amp_1q22	0.91	1
PIK3CA	10p-Amp	0.91	1
AGBL1	ATRX	0.911	1
ATRX	BRAF	0.911	1
PIK3CA	Del_9p21.3	0.911	1
7p-Amp	Amp_12p13.32	0.911	1
PTEN	Del_11p15.1	0.912	1
RB1	Del_1p32.3	0.912	1
11q-Amp	Del_9p21.3	0.912	1
Amp_17q25.1	Del_19q13.41	0.912	1
Del_5q34	Del_19q13.41	0.912	1
IDH1	PIK3CA	0.914	1
NIPBL	Del_11p15.5	0.914	1
TCF12	Del_14q24.3	0.914	1
Amp_19p13.2	Del_11p15.5	0.914	1
13q-Del	Amp_19p13.3	0.916	1
Amp_19p13.3	Del_6q22.31	0.916	1
EGFR	Del_4q34.3	0.917	1
FAM47C	9p-Del	0.918	1
FAM47C	Del_13q14.2	0.918	1
NF1	Amp_10p15.3	0.918	1
NIPBL	9p-Del	0.918	1
NOTCH1	Del_6q22.31	0.918	1
Amp_19p13.2	Del_13q14.2	0.918	1
Del_9p23	Del_19q13.41	0.919	1
NOTCH1	Del_11p15.5	0.92	1
SMARCA4	Del_19q13.41	0.92	1
TCF12	7q-Amp	0.92	1
TCF12	Amp_7p11.2	0.92	1
ARID2	19q-Del	0.921	1
18p-Del	Del_2q37.3	0.921	1
4q-Del	Del_2q37.3	0.921	1
Amp_12q14.1	Del_6q24.3	0.921	1
Amp_19p13.3	Del_11p15.1	0.921	1
ATRX	13q-Del	0.922	1
10p-Amp	Del_14q24.3	0.922	1
7p-Amp	Del_5q34	0.922	1
AGBL1	IDH1	0.923	1
HTRA2	IDH1	0.923	1
IDH1	NEU2	0.923	1
ARID2	Del_19q13.42	0.924	1
FUBP1	SMARCA4	0.924	1
SMARCA4	13q-Del	0.924	1
SMARCA4	Del_6q22.31	0.924	1
Amp_7q31.2	Del_14q24.3	0.924	1
Amp_13q34	Del_19q13.42	0.924	1
ARID2	Del_1p32.3	0.925	1
IDH1	Del_6q22.31	0.925	1
4q-Del	Del_10q26.3	0.925	1
ARID1A	Del_11p15.5	0.926	1
NOTCH1	Del_13q14.2	0.926	1
ARID2	Del_1p36.32	0.927	1
PIK3R1	Del_4q34.3	0.927	1
PTPN11	1p-Del	0.927	1
11q-Amp	Del_14q24.3	0.927	1
Amp_8q24.13	Del_6q24.3	0.927	1
Amp_10p15.3	Del_14q24.3	0.927	1
Amp_12q14.1	Del_9p23	0.928	1
NF1	11p-Del	0.929	1
PTPN11	TP53	0.929	1
SMARCA4	Del_11p15.1	0.929	1
10p-Del	11p-Del	0.929	1
11p-Del	6q-Del	0.929	1
18q-Del	Del_11p15.1	0.929	1
Amp_19p13.3	Del_6q24.3	0.929	1
Del_2q37.3	Del_19q13.41	0.93	1
CIB1	TP53	0.931	1
NRAS	TP53	0.931	1
4p-Del	Del_10q26.3	0.931	1
Amp_7q31.2	Del_11p15.5	0.931	1
ZBTB20	7p-Amp	0.932	1
Amp_7q32.3	Del_5q34	0.932	1
Amp_17q25.1	Del_19q13.42	0.932	1
Del_5q34	Del_19q13.42	0.932	1
14q-Del	Amp_12p13.32	0.933	1
NOTCH1	Del_6q24.3	0.935	1
TCF12	Del_9p23	0.935	1
ZNF512B	Del_19q13.41	0.935	1
SMARCA4	Del_6q24.3	0.936	1
CUL4B	TP53	0.937	1
19q-Del	Amp_17q25.1	0.937	1
6q-Del	Del_11p15.5	0.937	1
Del_5p15.33	Del_19q13.41	0.937	1
FUBP1	Amp_11q24.1	0.938	1
IDH2	9p-Del	0.938	1
IDH2	Del_13q14.2	0.938	1
7q-Amp	Del_12q12	0.938	1
13q-Del	Amp_11q24.1	0.938	1
19q-Del	Del_3p21.31	0.938	1
4q-Del	Del_6q22.31	0.938	1
Amp_3q26.33	Del_19q13.41	0.938	1
Amp_7p11.2	Del_12q12	0.938	1
Amp_8q24.13	Del_14q24.3	0.938	1
IRS4	19q-Del	0.939	1
PTPN11	19q-Del	0.939	1
EGFR	11p-Del	0.94	1
PIK3CA	9p-Del	0.94	1
Amp_7q32.3	Del_19q13.41	0.94	1
Amp_8q24.13	Amp_12q14.1	0.94	1
Del_12q12	Del_19q13.41	0.94	1
IRS4	Del_1p32.3	0.941	1
9p-Del	Del_19q13.42	0.941	1
Amp_11q24.1	Del_14q24.3	0.941	1
SMARCA4	Del_19q13.42	0.942	1
FAM47C	Del_9p21.3	0.943	1
IRS4	Del_1p36.32	0.943	1
PTPN11	Del_1p36.32	0.943	1
ZNF512B	Del_19q13.42	0.943	1
8q-Amp	10p-Del	0.943	1
Amp_7q31.2	Del_3q13.31	0.943	1
ATRX	SETD2	0.944	1
ZBTB20	Del_11p15.5	0.944	1
ATRX	RB1	0.945	1
ATRX	RBBP6	0.945	1
ATRX	Xq-Del	0.945	1
PTEN	Del_1p36.32	0.945	1
TNRC18	Del_19q13.41	0.945	1
CIC	NF1	0.946	1
TP53	4q-Del	0.946	1
14q-Del	Amp_8q24.13	0.946	1
Amp_8q24.13	Amp_19p13.3	0.946	1
NOTCH1	Del_9p21.3	0.947	1
4q-Del	Amp_7p11.2	0.947	1
Amp_3q26.33	Del_1p32.3	0.947	1
Amp_7q31.2	Del_19q13.42	0.948	1
Amp_19p13.2	Del_14q24.3	0.948	1
CIC	Amp_17q25.1	0.949	1
10q-Del	Del_11p15.5	0.949	1
4q-Del	Del_6q24.3	0.949	1
Amp_19p13.3	Del_4q34.3	0.949	1
SMARCA4	10p-Del	0.95	1
10p-Del	18q-Del	0.95	1
11p-Del	Amp_7p11.2	0.95	1
1p-Del	Del_13q14.2	0.95	1
Amp_3q26.33	Del_19q13.42	0.95	1
DNMT3A	IDH1	0.951	1
IDH1	PDGFRA	0.951	1
NF1	Del_2q37.3	0.951	1
TP53	4p-Del	0.952	1
8q-Amp	10q-Del	0.952	1
1p-Del	Amp_19p13.2	0.952	1
IDH1	RET	0.953	1
TCF12	Amp_7q31.2	0.953	1
ARID1A	Del_9p21.3	0.954	1
10p-Del	Del_4q34.3	0.954	1
TNRC18	Del_19q13.42	0.955	1
10p-Del	Del_12q12	0.955	1
Del_5p15.33	Del_19q13.42	0.955	1
EGFR	NOTCH1	0.956	1
FUBP1	9p-Del	0.956	1
NOTCH1	Amp_8q24.13	0.956	1
Amp_7p11.2	Del_11p15.1	0.956	1
7q-Amp	Del_1p36.32	0.957	1
10p-Del	Del_2q37.3	0.957	1
11p-Del	Del_18q23	0.957	1
Amp_1q32.1	Del_1p32.3	0.957	1
Del_12q12	Del_19q13.42	0.957	1
SMARCA4	10q-Del	0.958	1
TCF12	Del_10q26.3	0.958	1
10q-Del	18q-Del	0.958	1
EGFR	Del_2q37.3	0.959	1
NOTCH1	Amp_10p15.3	0.96	1
10p-Del	18p-Del	0.96	1
10p-Del	Amp_11q24.1	0.96	1
ATRX	Amp_19p13.3	0.961	1
7p-Amp	Del_11p15.5	0.962	1
ATRX	Del_7p22.3	0.963	1
IDH1	SRPX	0.963	1
IDH2	Del_9p21.3	0.963	1
NIPBL	Del_9p23	0.963	1
PTEN	Del_11p15.5	0.963	1
RB1	Del_19q13.41	0.963	1
10q-Del	Del_12q12	0.963	1
18p-Del	Amp_8q24.13	0.963	1
ATRX	15q-Del	0.965	1
BRAF	TP53	0.965	1
7q-Amp	Del_19q13.41	0.965	1
10q-Del	Del_4q34.3	0.965	1
NF1	Del_11p15.1	0.966	1
PDGFRA	Del_19q13.41	0.966	1
PRX	Del_19q13.41	0.966	1
SETD2	Del_19q13.41	0.966	1
STK19	Del_19q13.41	0.966	1
TNRC18	1p-Del	0.966	1
10q-Del	Del_2q37.3	0.966	1
19q-Del	Amp_19p13.2	0.966	1
Amp_1q22	Del_19q13.41	0.966	1
Amp_7p11.2	Del_5q34	0.966	1
ATRX	CREBZF	0.967	1
ATRX	RBPJ	0.967	1
10q-Del	18p-Del	0.967	1
10q-Del	Amp_11q24.1	0.967	1
Del_6p25.3	Del_19q13.41	0.967	1
ATRX	7p-Amp	0.968	1
RB1	Del_19q13.42	0.968	1
7q-Amp	Del_14q24.3	0.968	1
22q-Del	Del_1p36.32	0.968	1
Amp_19p13.2	Del_1p32.3	0.968	1
ARID1A	Del_9p23	0.969	1
FUBP1	Del_9p23	0.969	1
Del_11p15.5	Del_18q23	0.969	1
ATRX	NOTCH1	0.97	1
IDH1	TNRC18	0.97	1
Amp_7p11.2	Amp_12p13.32	0.97	1
ATRX	22q-Del	0.971	1
IDH1	Del_14q24.3	0.971	1
NOTCH1	Amp_7p11.2	0.971	1
EGFR	Del_11p15.1	0.972	1
PDGFRA	Del_19q13.42	0.972	1
SETD2	Del_19q13.42	0.972	1
SMARCA4	Del_10q26.3	0.972	1
STK19	Del_19q13.42	0.972	1
ZBTB20	Amp_7p11.2	0.972	1
Amp_1q22	Del_19q13.42	0.972	1
Amp_7q31.2	Del_12q12	0.972	1
TP53	Amp_19p13.3	0.973	1
19q-Del	Xp-Del	0.973	1
Del_3q13.31	Del_19q13.41	0.973	1
SMARCA4	Del_13q14.2	0.974	1
TNRC18	Del_1p32.3	0.974	1
10p-Del	Del_11p15.1	0.974	1
ATRX	Del_14q24.3	0.975	1
TNRC18	Del_1p36.32	0.975	1
7q-Amp	Del_1p32.3	0.975	1
Del_1p32.3	Del_6p25.3	0.975	1
Del_9p23	Del_19q13.42	0.975	1
STK19	1p-Del	0.976	1
TP53	14q-Del	0.976	1
Del_1p36.32	Del_6p25.3	0.976	1
NF1	Del_19q13.41	0.977	1
PIK3CA	14q-Del	0.977	1
Amp_4q12	Del_1p32.3	0.977	1
Del_6p25.3	Del_19q13.42	0.977	1
CIC	PTEN	0.978	1
CIC	Del_3p21.31	0.978	1
IRS4	Del_19q13.41	0.978	1
PTPN11	Del_19q13.41	0.978	1
TP53	18p-Del	0.978	1
TP53	9q-Del	0.979	1
ZBTB20	Del_9p23	0.979	1
Amp_12p13.32	Del_19q13.42	0.979	1
Amp_13q34	Del_19q13.41	0.979	1
Amp_19p13.2	Del_19q13.41	0.979	1
Del_3q13.31	Del_19q13.42	0.979	1
NF1	Amp_8q24.13	0.98	1
TCF12	Del_9p21.3	0.98	1
Amp_7q31.2	Del_1p32.3	0.98	1
ARID2	IDH1	0.981	1
18p-Del	Del_10q26.3	0.981	1
IRS4	Del_19q13.42	0.982	1
PTPN11	Del_19q13.42	0.982	1
RB1	TP53	0.982	1
STK19	19q-Del	0.982	1
Amp_7q31.2	Del_1p36.32	0.982	1
Amp_7q32.3	Del_12q12	0.982	1
IDH1	6q-Del	0.983	1
IDH1	Del_6p25.3	0.983	1
STK19	Del_1p32.3	0.983	1
ATRX	Del_Xq21.1	0.984	1
IDH1	9p-Del	0.984	1
8q-Amp	Del_14q24.3	0.984	1
Amp_7q31.2	Del_5q34	0.984	1
Amp_7q32.3	Del_19q13.42	0.984	1
ATRX	ZBTB20	0.985	1
ATRX	4p-Del	0.985	1
NF1	Del_19q13.42	0.985	1
10p-Del	Amp_10p15.3	0.985	1
Amp_19p13.2	Del_19q13.42	0.985	1
19p-Amp	Del_19q13.41	0.987	1
Del_1p32.3	Del_8q24.3	0.987	1
CIC	Del_12q12	0.988	1
IDH1	PRX	0.989	1
IDH1	SETD2	0.989	1
IDH1	STK19	0.989	1
IDH1	Amp_19p13.3	0.989	1
19p-Amp	1p-Del	0.989	1
8q-Amp	Del_19q13.42	0.989	1
CIC	Amp_4q12	0.99	1
FUBP1	Del_13q14.2	0.99	1
NF1	Del_11p15.5	0.99	1
PIK3R1	TP53	0.99	1
19p-Amp	Del_19q13.42	0.99	1
CREBZF	TP53	0.991	1
EGFR	Del_1p32.3	0.991	1
NIPBL	Del_9p21.3	0.991	1
RBPJ	TP53	0.991	1
7q-Amp	Del_19q13.42	0.991	1
ATRX	CUL4B	0.992	1
ATRX	Del_10q26.3	0.992	1
EGFR	Del_1p36.32	0.992	1
EGFR	Del_11p15.5	0.992	1
FUBP1	13q-Del	0.992	1
IDH1	Del_9p23	0.992	1
19p-Amp	19q-Del	0.992	1
19q-Del	Amp_3q26.33	0.992	1
19q-Del	Amp_Xp11.22	0.992	1
1p-Del	Del_3p21.31	0.992	1
Amp_7q32.3	Del_1p32.3	0.992	1
10p-Amp	Del_19q13.42	0.993	1
19p-Amp	Del_1p32.3	0.993	1
19q-Del	Del_6p25.3	0.993	1
Amp_3q26.33	Del_1p36.32	0.993	1
Amp_7q32.3	Del_1p36.32	0.993	1
Amp_Xp11.22	Del_1p36.32	0.993	1
Del_1p36.32	Del_12q12	0.993	1
7p-Amp	Del_1p32.3	0.994	1
ATRX	IDH2	0.995	1
ATRX	4q-Del	0.995	1
ATRX	Amp_12q14.1	0.995	1
7p-Amp	Del_1p36.32	0.995	1
8q-Amp	Del_19q13.41	0.995	1
10p-Del	Del_11p15.5	0.995	1
12q-Del	Del_19q13.41	0.995	1
19q-Del	Del_Xq21.1	0.995	1
Amp_7p11.2	Del_11p15.5	0.995	1
ATRX	Del_18q23	0.996	1
FUBP1	Amp_8q24.13	0.996	1
PTEN	Del_1p32.3	0.996	1
TP53	ZBTB20	0.996	1
7q-Amp	1p-Del	0.996	1
12q-Del	Del_19q13.42	0.996	1
19q-Del	Del_3q13.31	0.996	1
1p-Del	Amp_7q31.2	0.996	1
Amp_4q12	Del_1p36.32	0.996	1
Amp_12p13.32	Del_19q13.41	0.996	1
Amp_12q14.1	Del_1p32.3	0.996	1
Del_1p32.3	Del_3p21.31	0.996	1
Del_11p15.1	Del_19q13.42	0.996	1
ATRX	NF1	0.997	1
CIC	Amp_12q14.1	0.997	1
10p-Amp	Del_19q13.41	0.997	1
7q-Amp	19q-Del	0.997	1
8q-Amp	19q-Del	0.997	1
8q-Amp	Del_1p36.32	0.997	1
19q-Del	Amp_7q31.2	0.997	1
19q-Del	Del_5q34	0.997	1
1p-Del	Del_12q12	0.997	1
Amp_7p11.2	Del_1p32.3	0.997	1
Del_1p32.3	Del_3q13.31	0.997	1
Del_11p15.1	Del_19q13.41	0.997	1
ATRX	NIPBL	0.998	1
CIC	8q-Amp	0.998	1
CIC	9p-Del	0.998	1
FUBP1	7p-Amp	0.998	1
TP53	18q-Del	0.998	1
11p-Del	Del_19q13.42	0.998	1
19q-Del	Del_8q24.3	0.998	1
19q-Del	Del_12q12	0.998	1
1p-Del	Amp_1q32.1	0.998	1
1p-Del	Amp_7q32.3	0.998	1
1p-Del	Del_6p25.3	0.998	1
22q-Del	Del_1p32.3	0.998	1
Del_1p32.3	Del_12q12	0.998	1
Del_8q24.3	Del_19q13.41	0.998	1
ATRX	PTEN	0.999	1
ATRX	14q-Del	0.999	1
ATRX	18p-Del	0.999	1
CIC	7p-Amp	0.999	1
CIC	Del_9p23	0.999	1
IDH1	PTPN11	0.999	1
IDH1	Amp_3q26.33	0.999	1
NIPBL	TP53	0.999	1
NOTCH1	TP53	0.999	1
NOTCH1	Del_10q26.3	0.999	1
TP53	15q-Del	0.999	1
TP53	Amp_1q32.1	0.999	1
TP53	Amp_7p11.2	0.999	1
8q-Amp	1p-Del	0.999	1
10p-Del	Amp_8q24.13	0.999	1
10p-Del	Del_1p32.3	0.999	1
10q-Del	Amp_8q24.13	0.999	1
10q-Del	Del_1p32.3	0.999	1
11p-Del	Del_19q13.41	0.999	1
19q-Del	9p-Del	0.999	1
19q-Del	Amp_1q32.1	0.999	1
19q-Del	Amp_7q32.3	0.999	1
1p-Del	Amp_4q12	0.999	1
9p-Del	Del_1p36.32	0.999	1
Amp_1q32.1	Del_1p36.32	0.999	1
Amp_1q32.1	Del_19q13.41	0.999	1
Amp_8q24.13	Del_19q13.42	0.999	1
Del_1p36.32	Del_22q13.31	0.999	1
Del_8q24.3	Del_19q13.42	0.999	1
AGBL1	ANKRD36	1	1
AGBL1	ARID2	1	1
AGBL1	BRAF	1	1
AGBL1	CIB1	1	1
AGBL1	CREBZF	1	1
AGBL1	CUL4B	1	1
AGBL1	DDX5	1	1
AGBL1	DNMT3A	1	1
AGBL1	EMG1	1	1
AGBL1	FAM47C	1	1
AGBL1	FUBP1	1	1
AGBL1	GAGE2A	1	1
AGBL1	HTRA2	1	1
AGBL1	IDH2	1	1
AGBL1	IRS4	1	1
AGBL1	KRAS	1	1
AGBL1	KRT3	1	1
AGBL1	MED9	1	1
AGBL1	MYST4	1	1
AGBL1	MYT1	1	1
AGBL1	NAP1L2	1	1
AGBL1	NEU2	1	1
AGBL1	NF1	1	1
AGBL1	NIPBL	1	1
AGBL1	NOTCH1	1	1
AGBL1	NRAS	1	1
AGBL1	NUDT11	1	1
AGBL1	PDGFRA	1	1
AGBL1	PIK3CA	1	1
AGBL1	PIK3R1	1	1
AGBL1	PPL	1	1
AGBL1	PRX	1	1
AGBL1	PTEN	1	1
AGBL1	PTPN11	1	1
AGBL1	RB1	1	1
AGBL1	RBBP6	1	1
AGBL1	RET	1	1
AGBL1	ROBO3	1	1
AGBL1	SCN4A	1	1
AGBL1	SETD2	1	1
AGBL1	SLC6A3	1	1
AGBL1	SMARCA4	1	1
AGBL1	SMOC1	1	1
AGBL1	SRPX	1	1
AGBL1	STK19	1	1
AGBL1	TCF12	1	1
AGBL1	TMEM216	1	1
AGBL1	TNRC18	1	1
AGBL1	TRERF1	1	1
AGBL1	ZBTB20	1	1
AGBL1	ZMIZ1	1	1
AGBL1	ZNF512B	1	1
AGBL1	ZNF709	1	1
AGBL1	11q-Amp	1	1
AGBL1	8q-Amp	1	1
AGBL1	12q-Del	1	1
AGBL1	13q-Del	1	1
AGBL1	15q-Del	1	1
AGBL1	18p-Del	1	1
AGBL1	18q-Del	1	1
AGBL1	4p-Del	1	1
AGBL1	4q-Del	1	1
AGBL1	6q-Del	1	1
AGBL1	9q-Del	1	1
AGBL1	Xp-Del	1	1
AGBL1	Xq-Del	1	1
AGBL1	Amp_1q22	1	1
AGBL1	Amp_1q32.1	1	1
AGBL1	Amp_2p24.3	1	1
AGBL1	Amp_3q26.33	1	1
AGBL1	Amp_4q12	1	1
AGBL1	Amp_10p15.3	1	1
AGBL1	Amp_11q24.1	1	1
AGBL1	Amp_12q14.1	1	1
AGBL1	Amp_13q34	1	1
AGBL1	Amp_17q25.1	1	1
AGBL1	Del_1q43	1	1
AGBL1	Del_3q13.31	1	1
AGBL1	Del_3q29	1	1
AGBL1	Del_6p25.3	1	1
AGBL1	Del_6q24.3	1	1
AGBL1	Del_7p22.3	1	1
AGBL1	Del_8q24.3	1	1
AGBL1	Del_12q12	1	1
AGBL1	Del_13q14.2	1	1
AGBL1	Del_18q23	1	1
AGBL1	Del_Xq21.1	1	1
ANKRD36	ARID1A	1	1
ANKRD36	ARID2	1	1
ANKRD36	BRAF	1	1
ANKRD36	CIB1	1	1
ANKRD36	CIC	1	1
ANKRD36	CREBZF	1	1
ANKRD36	CUL4B	1	1
ANKRD36	DDX5	1	1
ANKRD36	EMG1	1	1
ANKRD36	FAM47C	1	1
ANKRD36	FUBP1	1	1
ANKRD36	GAGE2A	1	1
ANKRD36	HTRA2	1	1
ANKRD36	IDH2	1	1
ANKRD36	KRAS	1	1
ANKRD36	KRT3	1	1
ANKRD36	MED9	1	1
ANKRD36	MYST4	1	1
ANKRD36	NAP1L2	1	1
ANKRD36	NEU2	1	1
ANKRD36	NF1	1	1
ANKRD36	NIPBL	1	1
ANKRD36	NOTCH1	1	1
ANKRD36	NRAS	1	1
ANKRD36	NUDT11	1	1
ANKRD36	PDGFRA	1	1
ANKRD36	PIK3CA	1	1
ANKRD36	PIK3R1	1	1
ANKRD36	PLXNA3	1	1
ANKRD36	PPL	1	1
ANKRD36	PRX	1	1
ANKRD36	PTPN11	1	1
ANKRD36	RB1	1	1
ANKRD36	RBBP6	1	1
ANKRD36	RBPJ	1	1
ANKRD36	RET	1	1
ANKRD36	ROBO3	1	1
ANKRD36	SCN4A	1	1
ANKRD36	SETD2	1	1
ANKRD36	SLC6A3	1	1
ANKRD36	SMOC1	1	1
ANKRD36	SRPX	1	1
ANKRD36	STK19	1	1
ANKRD36	TCF12	1	1
ANKRD36	TMEM216	1	1
ANKRD36	TNRC18	1	1
ANKRD36	TRERF1	1	1
ANKRD36	ZBTB20	1	1
ANKRD36	ZMIZ1	1	1
ANKRD36	ZNF709	1	1
ANKRD36	11q-Amp	1	1
ANKRD36	19p-Amp	1	1
ANKRD36	12q-Del	1	1
ANKRD36	15q-Del	1	1
ANKRD36	18p-Del	1	1
ANKRD36	18q-Del	1	1
ANKRD36	19q-Del	1	1
ANKRD36	1p-Del	1	1
ANKRD36	4p-Del	1	1
ANKRD36	4q-Del	1	1
ANKRD36	9q-Del	1	1
ANKRD36	Xp-Del	1	1
ANKRD36	Xq-Del	1	1
ANKRD36	Amp_1q32.1	1	1
ANKRD36	Amp_2p24.3	1	1
ANKRD36	Amp_4q12	1	1
ANKRD36	Amp_11q24.1	1	1
ANKRD36	Amp_12q14.1	1	1
ANKRD36	Amp_13q34	1	1
ANKRD36	Amp_19p13.3	1	1
ANKRD36	Amp_19p13.2	1	1
ANKRD36	Amp_Xp11.22	1	1
ANKRD36	Del_1p36.32	1	1
ANKRD36	Del_1p32.3	1	1
ANKRD36	Del_1q43	1	1
ANKRD36	Del_3q29	1	1
ANKRD36	Del_5q34	1	1
ANKRD36	Del_6p25.3	1	1
ANKRD36	Del_8q24.3	1	1
ANKRD36	Del_12q12	1	1
ANKRD36	Del_13q14.2	1	1
ANKRD36	Del_19q13.41	1	1
ANKRD36	Del_19q13.42	1	1
ANKRD36	Del_Xq21.1	1	1
ARID1A	CIB1	1	1
ARID1A	CREBZF	1	1
ARID1A	GAGE2A	1	1
ARID1A	HTRA2	1	1
ARID1A	KRAS	1	1
ARID1A	KRT3	1	1
ARID1A	MED9	1	1
ARID1A	NEU2	1	1
ARID1A	NRAS	1	1
ARID1A	PTPN11	1	1
ARID1A	ROBO3	1	1
ARID1A	SMOC1	1	1
ARID1A	SRPX	1	1
ARID1A	TMEM216	1	1
ARID1A	ZNF709	1	1
ARID1A	19p-Amp	1	1
ARID1A	8q-Amp	1	1
ARID1A	10p-Del	1	1
ARID1A	10q-Del	1	1
ARID1A	11p-Del	1	1
ARID1A	12q-Del	1	1
ARID1A	22q-Del	1	1
ARID1A	9p-Del	1	1
ARID1A	9q-Del	1	1
ARID1A	Xq-Del	1	1
ARID1A	Amp_1q22	1	1
ARID1A	Amp_1q32.1	1	1
ARID1A	Amp_2p24.3	1	1
ARID1A	Amp_3q26.33	1	1
ARID1A	Amp_4q12	1	1
ARID1A	Amp_8q24.13	1	1
ARID1A	Amp_12q14.1	1	1
ARID1A	Amp_13q34	1	1
ARID1A	Amp_Xp11.22	1	1
ARID1A	Del_1q43	1	1
ARID1A	Del_3q13.31	1	1
ARID1A	Del_3q29	1	1
ARID1A	Del_5q34	1	1
ARID1A	Del_10q26.3	1	1
ARID1A	Del_11p15.1	1	1
ARID1A	Del_12q12	1	1
ARID1A	Del_Xq21.1	1	1
ARID2	CIB1	1	1
ARID2	CREBZF	1	1
ARID2	EMG1	1	1
ARID2	HTRA2	1	1
ARID2	KRAS	1	1
ARID2	KRT3	1	1
ARID2	MED9	1	1
ARID2	NEU2	1	1
ARID2	NRAS	1	1
ARID2	PTPN11	1	1
ARID2	ROBO3	1	1
ARID2	SMOC1	1	1
ARID2	SRPX	1	1
ARID2	TCF12	1	1
ARID2	TMEM216	1	1
ARID2	ZNF709	1	1
ARID2	11q-Amp	1	1
ARID2	19p-Amp	1	1
ARID2	8q-Amp	1	1
ARID2	11p-Del	1	1
ARID2	12q-Del	1	1
ARID2	14q-Del	1	1
ARID2	15q-Del	1	1
ARID2	18p-Del	1	1
ARID2	18q-Del	1	1
ARID2	4p-Del	1	1
ARID2	Xp-Del	1	1
ARID2	Xq-Del	1	1
ARID2	Amp_1q22	1	1
ARID2	Amp_1q32.1	1	1
ARID2	Amp_2p24.3	1	1
ARID2	Amp_3q26.33	1	1
ARID2	Amp_12p13.32	1	1
ARID2	Amp_17q25.1	1	1
ARID2	Amp_19p13.3	1	1
ARID2	Amp_19p13.2	1	1
ARID2	Amp_Xp11.22	1	1
ARID2	Del_1q43	1	1
ARID2	Del_3p21.31	1	1
ARID2	Del_3q13.31	1	1
ARID2	Del_3q29	1	1
ARID2	Del_5p15.33	1	1
ARID2	Del_7p22.3	1	1
ARID2	Del_8q24.3	1	1
ARID2	Del_11p15.5	1	1
ARID2	Del_11p15.1	1	1
ARID2	Del_12q12	1	1
ARID2	Del_14q24.3	1	1
ARID2	Del_18q23	1	1
ARID2	Del_Xq21.1	1	1
ATRX	CIC	1	1
ATRX	EGFR	1	1
ATRX	FUBP1	1	1
ATRX	KRAS	1	1
ATRX	NRAS	1	1
ATRX	PIK3CA	1	1
ATRX	TMEM216	1	1
ATRX	19p-Amp	1	1
ATRX	10p-Del	1	1
ATRX	10q-Del	1	1
ATRX	18q-Del	1	1
ATRX	19q-Del	1	1
ATRX	1p-Del	1	1
ATRX	Amp_1q32.1	1	1
ATRX	Amp_7p11.2	1	1
ATRX	Amp_19p13.2	1	1
ATRX	Del_1p36.32	1	1
ATRX	Del_1p32.3	1	1
ATRX	Del_19q13.41	1	1
ATRX	Del_19q13.42	1	1
BRAF	CIB1	1	1
BRAF	CREBZF	1	1
BRAF	EMG1	1	1
BRAF	GAGE2A	1	1
BRAF	HTRA2	1	1
BRAF	IDH1	1	1
BRAF	IDH2	1	1
BRAF	KRAS	1	1
BRAF	KRT3	1	1
BRAF	MED9	1	1
BRAF	NAP1L2	1	1
BRAF	NEU2	1	1
BRAF	NRAS	1	1
BRAF	PTPN11	1	1
BRAF	RBPJ	1	1
BRAF	ROBO3	1	1
BRAF	SMOC1	1	1
BRAF	SRPX	1	1
BRAF	TCF12	1	1
BRAF	TMEM216	1	1
BRAF	ZNF709	1	1
BRAF	10p-Amp	1	1
BRAF	11q-Amp	1	1
BRAF	19p-Amp	1	1
BRAF	8q-Amp	1	1
BRAF	11p-Del	1	1
BRAF	12q-Del	1	1
BRAF	13q-Del	1	1
BRAF	14q-Del	1	1
BRAF	15q-Del	1	1
BRAF	18p-Del	1	1
BRAF	18q-Del	1	1
BRAF	19q-Del	1	1
BRAF	1p-Del	1	1
BRAF	22q-Del	1	1
BRAF	4p-Del	1	1
BRAF	4q-Del	1	1
BRAF	6q-Del	1	1
BRAF	9q-Del	1	1
BRAF	Xp-Del	1	1
BRAF	Xq-Del	1	1
BRAF	Amp_1q22	1	1
BRAF	Amp_1q32.1	1	1
BRAF	Amp_2p24.3	1	1
BRAF	Amp_3q26.33	1	1
BRAF	Amp_4q12	1	1
BRAF	Amp_8q24.13	1	1
BRAF	Amp_10p15.3	1	1
BRAF	Amp_11q24.1	1	1
BRAF	Amp_12p13.32	1	1
BRAF	Amp_12q14.1	1	1
BRAF	Amp_13q34	1	1
BRAF	Amp_17q25.1	1	1
BRAF	Amp_19p13.3	1	1
BRAF	Amp_19p13.2	1	1
BRAF	Amp_Xp11.22	1	1
BRAF	Del_1p36.32	1	1
BRAF	Del_1p32.3	1	1
BRAF	Del_1q43	1	1
BRAF	Del_2q37.3	1	1
BRAF	Del_3p21.31	1	1
BRAF	Del_3q29	1	1
BRAF	Del_4q34.3	1	1
BRAF	Del_5p15.33	1	1
BRAF	Del_5q34	1	1
BRAF	Del_6q22.31	1	1
BRAF	Del_6q24.3	1	1
BRAF	Del_7p22.3	1	1
BRAF	Del_8q24.3	1	1
BRAF	Del_11p15.5	1	1
BRAF	Del_11p15.1	1	1
BRAF	Del_12q12	1	1
BRAF	Del_13q14.2	1	1
BRAF	Del_14q24.3	1	1
BRAF	Del_18q23	1	1
BRAF	Del_19q13.41	1	1
BRAF	Del_19q13.42	1	1
BRAF	Del_Xq21.1	1	1
CIB1	CREBZF	1	1
CIB1	CUL4B	1	1
CIB1	DDX5	1	1
CIB1	DNMT3A	1	1
CIB1	EGFR	1	1
CIB1	EMG1	1	1
CIB1	FAM47C	1	1
CIB1	FUBP1	1	1
CIB1	GAGE2A	1	1
CIB1	IRS4	1	1
CIB1	KRAS	1	1
CIB1	KRT3	1	1
CIB1	MED9	1	1
CIB1	MYST4	1	1
CIB1	MYT1	1	1
CIB1	NAP1L2	1	1
CIB1	NEU2	1	1
CIB1	NF1	1	1
CIB1	NIPBL	1	1
CIB1	NOTCH1	1	1
CIB1	NRAS	1	1
CIB1	PDGFRA	1	1
CIB1	PIK3CA	1	1
CIB1	PIK3R1	1	1
CIB1	PLXNA3	1	1
CIB1	PPL	1	1
CIB1	PRX	1	1
CIB1	PTEN	1	1
CIB1	PTPN11	1	1
CIB1	RB1	1	1
CIB1	RBBP6	1	1
CIB1	RET	1	1
CIB1	ROBO3	1	1
CIB1	SCN4A	1	1
CIB1	SETD2	1	1
CIB1	SLC6A3	1	1
CIB1	SMARCA4	1	1
CIB1	SMOC1	1	1
CIB1	SRPX	1	1
CIB1	STK19	1	1
CIB1	TCF12	1	1
CIB1	TNRC18	1	1
CIB1	TRERF1	1	1
CIB1	ZBTB20	1	1
CIB1	ZMIZ1	1	1
CIB1	ZNF512B	1	1
CIB1	ZNF709	1	1
CIB1	10p-Amp	1	1
CIB1	11q-Amp	1	1
CIB1	19p-Amp	1	1
CIB1	10p-Del	1	1
CIB1	10q-Del	1	1
CIB1	12q-Del	1	1
CIB1	13q-Del	1	1
CIB1	14q-Del	1	1
CIB1	18p-Del	1	1
CIB1	18q-Del	1	1
CIB1	6q-Del	1	1
CIB1	9p-Del	1	1
CIB1	9q-Del	1	1
CIB1	Xp-Del	1	1
CIB1	Xq-Del	1	1
CIB1	Amp_1q22	1	1
CIB1	Amp_1q32.1	1	1
CIB1	Amp_2p24.3	1	1
CIB1	Amp_3q26.33	1	1
CIB1	Amp_10p15.3	1	1
CIB1	Amp_11q24.1	1	1
CIB1	Amp_12p13.32	1	1
CIB1	Amp_12q14.1	1	1
CIB1	Amp_13q34	1	1
CIB1	Amp_17q25.1	1	1
CIB1	Amp_19p13.3	1	1
CIB1	Amp_19p13.2	1	1
CIB1	Del_1q43	1	1
CIB1	Del_2q37.3	1	1
CIB1	Del_3p21.31	1	1
CIB1	Del_3q13.31	1	1
CIB1	Del_5p15.33	1	1
CIB1	Del_5q34	1	1
CIB1	Del_6p25.3	1	1
CIB1	Del_6q22.31	1	1
CIB1	Del_6q24.3	1	1
CIB1	Del_7p22.3	1	1
CIB1	Del_8q24.3	1	1
CIB1	Del_9p23	1	1
CIB1	Del_10q26.3	1	1
CIB1	Del_12q12	1	1
CIB1	Del_14q24.3	1	1
CIB1	Del_18q23	1	1
CIB1	Del_Xq21.1	1	1
CIC	EGFR	1	1
CIC	GAGE2A	1	1
CIC	KRAS	1	1
CIC	KRT3	1	1
CIC	NEU2	1	1
CIC	NRAS	1	1
CIC	SMOC1	1	1
CIC	TP53	1	1
CIC	10p-Amp	1	1
CIC	19p-Amp	1	1
CIC	7q-Amp	1	1
CIC	10p-Del	1	1
CIC	10q-Del	1	1
CIC	11p-Del	1	1
CIC	12q-Del	1	1
CIC	22q-Del	1	1
CIC	6q-Del	1	1
CIC	Xp-Del	1	1
CIC	Xq-Del	1	1
CIC	Amp_1q32.1	1	1
CIC	Amp_2p24.3	1	1
CIC	Amp_3q26.33	1	1
CIC	Amp_7p11.2	1	1
CIC	Amp_7q31.2	1	1
CIC	Amp_7q32.3	1	1
CIC	Amp_8q24.13	1	1
CIC	Amp_10p15.3	1	1
CIC	Amp_12p13.32	1	1
CIC	Amp_13q34	1	1
CIC	Amp_19p13.2	1	1
CIC	Amp_Xp11.22	1	1
CIC	Del_1q43	1	1
CIC	Del_2q37.3	1	1
CIC	Del_3q13.31	1	1
CIC	Del_3q29	1	1
CIC	Del_5p15.33	1	1
CIC	Del_5q34	1	1
CIC	Del_6p25.3	1	1
CIC	Del_6q22.31	1	1
CIC	Del_6q24.3	1	1
CIC	Del_7p22.3	1	1
CIC	Del_8q24.3	1	1
CIC	Del_9p21.3	1	1
CIC	Del_10q26.3	1	1
CIC	Del_11p15.5	1	1
CIC	Del_11p15.1	1	1
CIC	Del_22q13.31	1	1
CIC	Del_Xq21.1	1	1
CREBZF	CUL4B	1	1
CREBZF	DDX5	1	1
CREBZF	DNMT3A	1	1
CREBZF	EGFR	1	1
CREBZF	EMG1	1	1
CREBZF	FAM47C	1	1
CREBZF	GAGE2A	1	1
CREBZF	HTRA2	1	1
CREBZF	IDH2	1	1
CREBZF	IRS4	1	1
CREBZF	KRAS	1	1
CREBZF	KRT3	1	1
CREBZF	MED9	1	1
CREBZF	MYT1	1	1
CREBZF	NAP1L2	1	1
CREBZF	NEU2	1	1
CREBZF	NF1	1	1
CREBZF	NIPBL	1	1
CREBZF	NRAS	1	1
CREBZF	NUDT11	1	1
CREBZF	PDGFRA	1	1
CREBZF	PLXNA3	1	1
CREBZF	PPL	1	1
CREBZF	PTEN	1	1
CREBZF	PTPN11	1	1
CREBZF	RB1	1	1
CREBZF	RBBP6	1	1
CREBZF	RBPJ	1	1
CREBZF	RET	1	1
CREBZF	ROBO3	1	1
CREBZF	SCN4A	1	1
CREBZF	SETD2	1	1
CREBZF	SLC6A3	1	1
CREBZF	SMARCA4	1	1
CREBZF	SMOC1	1	1
CREBZF	SRPX	1	1
CREBZF	STK19	1	1
CREBZF	TCF12	1	1
CREBZF	TMEM216	1	1
CREBZF	TNRC18	1	1
CREBZF	TRERF1	1	1
CREBZF	ZBTB20	1	1
CREBZF	ZMIZ1	1	1
CREBZF	ZNF512B	1	1
CREBZF	ZNF709	1	1
CREBZF	10p-Amp	1	1
CREBZF	11q-Amp	1	1
CREBZF	19p-Amp	1	1
CREBZF	7p-Amp	1	1
CREBZF	7q-Amp	1	1
CREBZF	10p-Del	1	1
CREBZF	10q-Del	1	1
CREBZF	11p-Del	1	1
CREBZF	12q-Del	1	1
CREBZF	13q-Del	1	1
CREBZF	15q-Del	1	1
CREBZF	22q-Del	1	1
CREBZF	4p-Del	1	1
CREBZF	Xp-Del	1	1
CREBZF	Xq-Del	1	1
CREBZF	Amp_1q22	1	1
CREBZF	Amp_1q32.1	1	1
CREBZF	Amp_2p24.3	1	1
CREBZF	Amp_3q26.33	1	1
CREBZF	Amp_7p11.2	1	1
CREBZF	Amp_7q31.2	1	1
CREBZF	Amp_7q32.3	1	1
CREBZF	Amp_10p15.3	1	1
CREBZF	Amp_11q24.1	1	1
CREBZF	Amp_12p13.32	1	1
CREBZF	Amp_12q14.1	1	1
CREBZF	Amp_13q34	1	1
CREBZF	Amp_17q25.1	1	1
CREBZF	Amp_19p13.3	1	1
CREBZF	Amp_19p13.2	1	1
CREBZF	Amp_Xp11.22	1	1
CREBZF	Del_1q43	1	1
CREBZF	Del_2q37.3	1	1
CREBZF	Del_3q13.31	1	1
CREBZF	Del_3q29	1	1
CREBZF	Del_5p15.33	1	1
CREBZF	Del_5q34	1	1
CREBZF	Del_6p25.3	1	1
CREBZF	Del_7p22.3	1	1
CREBZF	Del_8q24.3	1	1
CREBZF	Del_10q26.3	1	1
CREBZF	Del_11p15.5	1	1
CREBZF	Del_11p15.1	1	1
CREBZF	Del_12q12	1	1
CREBZF	Del_22q13.31	1	1
CREBZF	Del_Xq21.1	1	1
CUL4B	EMG1	1	1
CUL4B	GAGE2A	1	1
CUL4B	HTRA2	1	1
CUL4B	IDH2	1	1
CUL4B	KRAS	1	1
CUL4B	KRT3	1	1
CUL4B	MED9	1	1
CUL4B	NAP1L2	1	1
CUL4B	NEU2	1	1
CUL4B	NRAS	1	1
CUL4B	PTPN11	1	1
CUL4B	RBPJ	1	1
CUL4B	ROBO3	1	1
CUL4B	SMOC1	1	1
CUL4B	SRPX	1	1
CUL4B	TMEM216	1	1
CUL4B	ZNF709	1	1
CUL4B	11q-Amp	1	1
CUL4B	8q-Amp	1	1
CUL4B	12q-Del	1	1
CUL4B	22q-Del	1	1
CUL4B	4p-Del	1	1
CUL4B	4q-Del	1	1
CUL4B	9q-Del	1	1
CUL4B	Xp-Del	1	1
CUL4B	Xq-Del	1	1
CUL4B	Amp_1q22	1	1
CUL4B	Amp_3q26.33	1	1
CUL4B	Amp_4q12	1	1
CUL4B	Amp_8q24.13	1	1
CUL4B	Amp_10p15.3	1	1
CUL4B	Amp_11q24.1	1	1
CUL4B	Amp_12p13.32	1	1
CUL4B	Amp_12q14.1	1	1
CUL4B	Amp_13q34	1	1
CUL4B	Del_1q43	1	1
CUL4B	Del_2q37.3	1	1
CUL4B	Del_3p21.31	1	1
CUL4B	Del_3q13.31	1	1
CUL4B	Del_3q29	1	1
CUL4B	Del_4q34.3	1	1
CUL4B	Del_5q34	1	1
CUL4B	Del_7p22.3	1	1
CUL4B	Del_8q24.3	1	1
CUL4B	Del_22q13.31	1	1
CUL4B	Del_Xq21.1	1	1
DDX5	EMG1	1	1
DDX5	GAGE2A	1	1
DDX5	HTRA2	1	1
DDX5	IDH2	1	1
DDX5	KRAS	1	1
DDX5	KRT3	1	1
DDX5	MED9	1	1
DDX5	NAP1L2	1	1
DDX5	NEU2	1	1
DDX5	NRAS	1	1
DDX5	PTPN11	1	1
DDX5	RBPJ	1	1
DDX5	ROBO3	1	1
DDX5	SMOC1	1	1
DDX5	SRPX	1	1
DDX5	TCF12	1	1
DDX5	TMEM216	1	1
DDX5	ZNF709	1	1
DDX5	10p-Amp	1	1
DDX5	11q-Amp	1	1
DDX5	19p-Amp	1	1
DDX5	8q-Amp	1	1
DDX5	10p-Del	1	1
DDX5	10q-Del	1	1
DDX5	11p-Del	1	1
DDX5	12q-Del	1	1
DDX5	13q-Del	1	1
DDX5	14q-Del	1	1
DDX5	15q-Del	1	1
DDX5	18q-Del	1	1
DDX5	4p-Del	1	1
DDX5	6q-Del	1	1
DDX5	9q-Del	1	1
DDX5	Xp-Del	1	1
DDX5	Xq-Del	1	1
DDX5	Amp_1q22	1	1
DDX5	Amp_1q32.1	1	1
DDX5	Amp_2p24.3	1	1
DDX5	Amp_3q26.33	1	1
DDX5	Amp_11q24.1	1	1
DDX5	Amp_12q14.1	1	1
DDX5	Amp_13q34	1	1
DDX5	Amp_17q25.1	1	1
DDX5	Amp_19p13.3	1	1
DDX5	Amp_Xp11.22	1	1
DDX5	Del_1q43	1	1
DDX5	Del_2q37.3	1	1
DDX5	Del_3p21.31	1	1
DDX5	Del_3q13.31	1	1
DDX5	Del_3q29	1	1
DDX5	Del_5q34	1	1
DDX5	Del_6p25.3	1	1
DDX5	Del_6q22.31	1	1
DDX5	Del_6q24.3	1	1
DDX5	Del_7p22.3	1	1
DDX5	Del_8q24.3	1	1
DDX5	Del_10q26.3	1	1
DDX5	Del_11p15.1	1	1
DDX5	Del_12q12	1	1
DDX5	Del_13q14.2	1	1
DDX5	Del_14q24.3	1	1
DDX5	Del_18q23	1	1
DDX5	Del_Xq21.1	1	1
DNMT3A	EMG1	1	1
DNMT3A	HTRA2	1	1
DNMT3A	KRAS	1	1
DNMT3A	KRT3	1	1
DNMT3A	MED9	1	1
DNMT3A	NEU2	1	1
DNMT3A	NRAS	1	1
DNMT3A	PTPN11	1	1
DNMT3A	RBPJ	1	1
DNMT3A	ROBO3	1	1
DNMT3A	SMOC1	1	1
DNMT3A	SRPX	1	1
DNMT3A	TCF12	1	1
DNMT3A	TMEM216	1	1
DNMT3A	ZNF709	1	1
DNMT3A	19p-Amp	1	1
DNMT3A	10p-Del	1	1
DNMT3A	10q-Del	1	1
DNMT3A	12q-Del	1	1
DNMT3A	13q-Del	1	1
DNMT3A	15q-Del	1	1
DNMT3A	22q-Del	1	1
DNMT3A	4p-Del	1	1
DNMT3A	4q-Del	1	1
DNMT3A	9p-Del	1	1
DNMT3A	9q-Del	1	1
DNMT3A	Amp_1q32.1	1	1
DNMT3A	Amp_2p24.3	1	1
DNMT3A	Amp_3q26.33	1	1
DNMT3A	Amp_4q12	1	1
DNMT3A	Amp_12q14.1	1	1
DNMT3A	Amp_13q34	1	1
DNMT3A	Amp_17q25.1	1	1
DNMT3A	Amp_19p13.2	1	1
DNMT3A	Amp_Xp11.22	1	1
DNMT3A	Del_1q43	1	1
DNMT3A	Del_3p21.31	1	1
DNMT3A	Del_3q13.31	1	1
DNMT3A	Del_3q29	1	1
DNMT3A	Del_5p15.33	1	1
DNMT3A	Del_5q34	1	1
DNMT3A	Del_7p22.3	1	1
DNMT3A	Del_9p23	1	1
DNMT3A	Del_9p21.3	1	1
DNMT3A	Del_12q12	1	1
DNMT3A	Del_13q14.2	1	1
DNMT3A	Del_22q13.31	1	1
EGFR	EMG1	1	1
EGFR	GAGE2A	1	1
EGFR	HTRA2	1	1
EGFR	IDH1	1	1
EGFR	IDH2	1	1
EGFR	KRAS	1	1
EGFR	KRT3	1	1
EGFR	MED9	1	1
EGFR	NAP1L2	1	1
EGFR	NEU2	1	1
EGFR	NRAS	1	1
EGFR	PTPN11	1	1
EGFR	ROBO3	1	1
EGFR	SMOC1	1	1
EGFR	TCF12	1	1
EGFR	TMEM216	1	1
EGFR	TP53	1	1
EGFR	ZNF709	1	1
EGFR	10p-Amp	1	1
EGFR	11q-Amp	1	1
EGFR	8q-Amp	1	1
EGFR	12q-Del	1	1
EGFR	19q-Del	1	1
EGFR	1p-Del	1	1
EGFR	Amp_2p24.3	1	1
EGFR	Amp_3q26.33	1	1
EGFR	Amp_8q24.13	1	1
EGFR	Amp_10p15.3	1	1
EGFR	Amp_11q24.1	1	1
EGFR	Amp_12p13.32	1	1
EGFR	Amp_Xp11.22	1	1
EGFR	Del_1q43	1	1
EGFR	Del_3q13.31	1	1
EGFR	Del_3q29	1	1
EGFR	Del_7p22.3	1	1
EGFR	Del_8q24.3	1	1
EGFR	Del_12q12	1	1
EGFR	Del_19q13.41	1	1
EGFR	Del_19q13.42	1	1
EGFR	Del_Xq21.1	1	1
EMG1	FAM47C	1	1
EMG1	GAGE2A	1	1
EMG1	HTRA2	1	1
EMG1	IDH2	1	1
EMG1	IRS4	1	1
EMG1	KRAS	1	1
EMG1	KRT3	1	1
EMG1	MED9	1	1
EMG1	MYT1	1	1
EMG1	NAP1L2	1	1
EMG1	NEU2	1	1
EMG1	NIPBL	1	1
EMG1	NRAS	1	1
EMG1	NUDT11	1	1
EMG1	PDGFRA	1	1
EMG1	PIK3CA	1	1
EMG1	PLXNA3	1	1
EMG1	PPL	1	1
EMG1	PRX	1	1
EMG1	PTEN	1	1
EMG1	PTPN11	1	1
EMG1	RB1	1	1
EMG1	RBBP6	1	1
EMG1	RBPJ	1	1
EMG1	RET	1	1
EMG1	ROBO3	1	1
EMG1	SCN4A	1	1
EMG1	SETD2	1	1
EMG1	SLC6A3	1	1
EMG1	SMARCA4	1	1
EMG1	SMOC1	1	1
EMG1	SRPX	1	1
EMG1	STK19	1	1
EMG1	TCF12	1	1
EMG1	TMEM216	1	1
EMG1	TNRC18	1	1
EMG1	TRERF1	1	1
EMG1	ZBTB20	1	1
EMG1	ZNF512B	1	1
EMG1	ZNF709	1	1
EMG1	19p-Amp	1	1
EMG1	8q-Amp	1	1
EMG1	10p-Del	1	1
EMG1	10q-Del	1	1
EMG1	11p-Del	1	1
EMG1	12q-Del	1	1
EMG1	14q-Del	1	1
EMG1	18p-Del	1	1
EMG1	18q-Del	1	1
EMG1	22q-Del	1	1
EMG1	4p-Del	1	1
EMG1	4q-Del	1	1
EMG1	6q-Del	1	1
EMG1	9q-Del	1	1
EMG1	Xp-Del	1	1
EMG1	Xq-Del	1	1
EMG1	Amp_1q22	1	1
EMG1	Amp_1q32.1	1	1
EMG1	Amp_2p24.3	1	1
EMG1	Amp_3q26.33	1	1
EMG1	Amp_4q12	1	1
EMG1	Amp_8q24.13	1	1
EMG1	Amp_12p13.32	1	1
EMG1	Amp_12q14.1	1	1
EMG1	Amp_13q34	1	1
EMG1	Amp_19p13.2	1	1
EMG1	Amp_Xp11.22	1	1
EMG1	Del_1q43	1	1
EMG1	Del_3q13.31	1	1
EMG1	Del_4q34.3	1	1
EMG1	Del_5p15.33	1	1
EMG1	Del_5q34	1	1
EMG1	Del_6p25.3	1	1
EMG1	Del_6q22.31	1	1
EMG1	Del_6q24.3	1	1
EMG1	Del_8q24.3	1	1
EMG1	Del_11p15.5	1	1
EMG1	Del_11p15.1	1	1
EMG1	Del_14q24.3	1	1
EMG1	Del_18q23	1	1
EMG1	Del_22q13.31	1	1
EMG1	Del_Xq21.1	1	1
FAM47C	GAGE2A	1	1
FAM47C	HTRA2	1	1
FAM47C	IDH2	1	1
FAM47C	KRAS	1	1
FAM47C	KRT3	1	1
FAM47C	MED9	1	1
FAM47C	NAP1L2	1	1
FAM47C	NEU2	1	1
FAM47C	NRAS	1	1
FAM47C	PTPN11	1	1
FAM47C	RBPJ	1	1
FAM47C	ROBO3	1	1
FAM47C	SMOC1	1	1
FAM47C	SRPX	1	1
FAM47C	TCF12	1	1
FAM47C	TMEM216	1	1
FAM47C	10p-Amp	1	1
FAM47C	11q-Amp	1	1
FAM47C	19p-Amp	1	1
FAM47C	8q-Amp	1	1
FAM47C	10p-Del	1	1
FAM47C	10q-Del	1	1
FAM47C	12q-Del	1	1
FAM47C	14q-Del	1	1
FAM47C	15q-Del	1	1
FAM47C	18p-Del	1	1
FAM47C	18q-Del	1	1
FAM47C	22q-Del	1	1
FAM47C	4p-Del	1	1
FAM47C	6q-Del	1	1
FAM47C	9q-Del	1	1
FAM47C	Xp-Del	1	1
FAM47C	Xq-Del	1	1
FAM47C	Amp_1q22	1	1
FAM47C	Amp_2p24.3	1	1
FAM47C	Amp_3q26.33	1	1
FAM47C	Amp_4q12	1	1
FAM47C	Amp_8q24.13	1	1
FAM47C	Amp_10p15.3	1	1
FAM47C	Amp_11q24.1	1	1
FAM47C	Amp_12p13.32	1	1
FAM47C	Amp_13q34	1	1
FAM47C	Amp_17q25.1	1	1
FAM47C	Amp_19p13.3	1	1
FAM47C	Amp_Xp11.22	1	1
FAM47C	Del_1q43	1	1
FAM47C	Del_2q37.3	1	1
FAM47C	Del_3p21.31	1	1
FAM47C	Del_3q13.31	1	1
FAM47C	Del_6p25.3	1	1
FAM47C	Del_6q24.3	1	1
FAM47C	Del_7p22.3	1	1
FAM47C	Del_10q26.3	1	1
FAM47C	Del_14q24.3	1	1
FAM47C	Del_18q23	1	1
FAM47C	Del_22q13.31	1	1
FAM47C	Del_Xq21.1	1	1
FUBP1	HTRA2	1	1
FUBP1	KRAS	1	1
FUBP1	MED9	1	1
FUBP1	NEU2	1	1
FUBP1	PTPN11	1	1
FUBP1	SMOC1	1	1
FUBP1	TMEM216	1	1
FUBP1	TP53	1	1
FUBP1	10p-Amp	1	1
FUBP1	19p-Amp	1	1
FUBP1	7q-Amp	1	1
FUBP1	8q-Amp	1	1
FUBP1	10p-Del	1	1
FUBP1	10q-Del	1	1
FUBP1	11p-Del	1	1
FUBP1	12q-Del	1	1
FUBP1	15q-Del	1	1
FUBP1	22q-Del	1	1
FUBP1	4p-Del	1	1
FUBP1	6q-Del	1	1
FUBP1	Xp-Del	1	1
FUBP1	Xq-Del	1	1
FUBP1	Amp_1q32.1	1	1
FUBP1	Amp_2p24.3	1	1
FUBP1	Amp_3q26.33	1	1
FUBP1	Amp_4q12	1	1
FUBP1	Amp_7p11.2	1	1
FUBP1	Amp_7q31.2	1	1
FUBP1	Amp_7q32.3	1	1
FUBP1	Amp_10p15.3	1	1
FUBP1	Amp_12p13.32	1	1
FUBP1	Amp_12q14.1	1	1
FUBP1	Amp_13q34	1	1
FUBP1	Amp_19p13.2	1	1
FUBP1	Amp_Xp11.22	1	1
FUBP1	Del_1q43	1	1
FUBP1	Del_2q37.3	1	1
FUBP1	Del_3q13.31	1	1
FUBP1	Del_3q29	1	1
FUBP1	Del_5p15.33	1	1
FUBP1	Del_5q34	1	1
FUBP1	Del_6p25.3	1	1
FUBP1	Del_6q22.31	1	1
FUBP1	Del_6q24.3	1	1
FUBP1	Del_8q24.3	1	1
FUBP1	Del_9p21.3	1	1
FUBP1	Del_10q26.3	1	1
FUBP1	Del_11p15.5	1	1
FUBP1	Del_11p15.1	1	1
FUBP1	Del_22q13.31	1	1
FUBP1	Del_Xq21.1	1	1
GAGE2A	HTRA2	1	1
GAGE2A	IRS4	1	1
GAGE2A	KRAS	1	1
GAGE2A	KRT3	1	1
GAGE2A	MED9	1	1
GAGE2A	MYST4	1	1
GAGE2A	MYT1	1	1
GAGE2A	NAP1L2	1	1
GAGE2A	NEU2	1	1
GAGE2A	NF1	1	1
GAGE2A	NIPBL	1	1
GAGE2A	NRAS	1	1
GAGE2A	NUDT11	1	1
GAGE2A	PDGFRA	1	1
GAGE2A	PLXNA3	1	1
GAGE2A	PPL	1	1
GAGE2A	PRX	1	1
GAGE2A	PTEN	1	1
GAGE2A	PTPN11	1	1
GAGE2A	RB1	1	1
GAGE2A	RBBP6	1	1
GAGE2A	RBPJ	1	1
GAGE2A	RET	1	1
GAGE2A	ROBO3	1	1
GAGE2A	SCN4A	1	1
GAGE2A	SETD2	1	1
GAGE2A	SLC6A3	1	1
GAGE2A	SMARCA4	1	1
GAGE2A	SMOC1	1	1
GAGE2A	SRPX	1	1
GAGE2A	STK19	1	1
GAGE2A	TCF12	1	1
GAGE2A	TMEM216	1	1
GAGE2A	TNRC18	1	1
GAGE2A	TRERF1	1	1
GAGE2A	ZMIZ1	1	1
GAGE2A	ZNF512B	1	1
GAGE2A	ZNF709	1	1
GAGE2A	10p-Amp	1	1
GAGE2A	11q-Amp	1	1
GAGE2A	19p-Amp	1	1
GAGE2A	8q-Amp	1	1
GAGE2A	13q-Del	1	1
GAGE2A	14q-Del	1	1
GAGE2A	15q-Del	1	1
GAGE2A	18p-Del	1	1
GAGE2A	18q-Del	1	1
GAGE2A	4p-Del	1	1
GAGE2A	4q-Del	1	1
GAGE2A	6q-Del	1	1
GAGE2A	Xp-Del	1	1
GAGE2A	Xq-Del	1	1
GAGE2A	Amp_1q22	1	1
GAGE2A	Amp_1q32.1	1	1
GAGE2A	Amp_2p24.3	1	1
GAGE2A	Amp_3q26.33	1	1
GAGE2A	Amp_4q12	1	1
GAGE2A	Amp_11q24.1	1	1
GAGE2A	Amp_12p13.32	1	1
GAGE2A	Amp_12q14.1	1	1
GAGE2A	Amp_13q34	1	1
GAGE2A	Amp_17q25.1	1	1
GAGE2A	Amp_19p13.2	1	1
GAGE2A	Del_1q43	1	1
GAGE2A	Del_2q37.3	1	1
GAGE2A	Del_3p21.31	1	1
GAGE2A	Del_3q29	1	1
GAGE2A	Del_4q34.3	1	1
GAGE2A	Del_5p15.33	1	1
GAGE2A	Del_6q22.31	1	1
GAGE2A	Del_6q24.3	1	1
GAGE2A	Del_18q23	1	1
GAGE2A	Del_Xq21.1	1	1
HTRA2	IRS4	1	1
HTRA2	KRAS	1	1
HTRA2	KRT3	1	1
HTRA2	MED9	1	1
HTRA2	MYST4	1	1
HTRA2	MYT1	1	1
HTRA2	NAP1L2	1	1
HTRA2	NEU2	1	1
HTRA2	NF1	1	1
HTRA2	NIPBL	1	1
HTRA2	NOTCH1	1	1
HTRA2	NRAS	1	1
HTRA2	NUDT11	1	1
HTRA2	PDGFRA	1	1
HTRA2	PIK3CA	1	1
HTRA2	PIK3R1	1	1
HTRA2	PLXNA3	1	1
HTRA2	PPL	1	1
HTRA2	PRX	1	1
HTRA2	PTEN	1	1
HTRA2	PTPN11	1	1
HTRA2	RB1	1	1
HTRA2	RBBP6	1	1
HTRA2	RET	1	1
HTRA2	ROBO3	1	1
HTRA2	SCN4A	1	1
HTRA2	SETD2	1	1
HTRA2	SLC6A3	1	1
HTRA2	SMARCA4	1	1
HTRA2	SMOC1	1	1
HTRA2	SRPX	1	1
HTRA2	TCF12	1	1
HTRA2	TNRC18	1	1
HTRA2	TRERF1	1	1
HTRA2	ZBTB20	1	1
HTRA2	ZMIZ1	1	1
HTRA2	ZNF512B	1	1
HTRA2	ZNF709	1	1
HTRA2	10p-Amp	1	1
HTRA2	11q-Amp	1	1
HTRA2	19p-Amp	1	1
HTRA2	10p-Del	1	1
HTRA2	10q-Del	1	1
HTRA2	12q-Del	1	1
HTRA2	13q-Del	1	1
HTRA2	14q-Del	1	1
HTRA2	15q-Del	1	1
HTRA2	18p-Del	1	1
HTRA2	18q-Del	1	1
HTRA2	Amp_1q22	1	1
HTRA2	Amp_1q32.1	1	1
HTRA2	Amp_2p24.3	1	1
HTRA2	Amp_3q26.33	1	1
HTRA2	Amp_4q12	1	1
HTRA2	Amp_10p15.3	1	1
HTRA2	Amp_11q24.1	1	1
HTRA2	Amp_12p13.32	1	1
HTRA2	Amp_12q14.1	1	1
HTRA2	Amp_13q34	1	1
HTRA2	Amp_17q25.1	1	1
HTRA2	Amp_19p13.3	1	1
HTRA2	Amp_19p13.2	1	1
HTRA2	Amp_Xp11.22	1	1
HTRA2	Del_1q43	1	1
HTRA2	Del_5p15.33	1	1
HTRA2	Del_5q34	1	1
HTRA2	Del_13q14.2	1	1
HTRA2	Del_18q23	1	1
IDH1	IDH2	1	1
IDH1	NF1	1	1
IDH1	PTEN	1	1
IDH1	RB1	1	1
IDH1	19p-Amp	1	1
IDH1	7p-Amp	1	1
IDH1	7q-Amp	1	1
IDH1	10p-Del	1	1
IDH1	10q-Del	1	1
IDH1	14q-Del	1	1
IDH1	22q-Del	1	1
IDH1	Amp_1q32.1	1	1
IDH1	Amp_7p11.2	1	1
IDH1	Amp_7q31.2	1	1
IDH1	Amp_7q32.3	1	1
IDH1	Amp_12q14.1	1	1
IDH1	Amp_19p13.2	1	1
IDH1	Del_9p21.3	1	1
IDH1	Del_10q26.3	1	1
IDH1	Del_22q13.31	1	1
IDH2	IRS4	1	1
IDH2	KRAS	1	1
IDH2	KRT3	1	1
IDH2	MED9	1	1
IDH2	MYST4	1	1
IDH2	MYT1	1	1
IDH2	NEU2	1	1
IDH2	NRAS	1	1
IDH2	NUDT11	1	1
IDH2	PDGFRA	1	1
IDH2	PIK3R1	1	1
IDH2	PLXNA3	1	1
IDH2	PPL	1	1
IDH2	PRX	1	1
IDH2	PTEN	1	1
IDH2	PTPN11	1	1
IDH2	RB1	1	1
IDH2	RBBP6	1	1
IDH2	RET	1	1
IDH2	ROBO3	1	1
IDH2	SCN4A	1	1
IDH2	SETD2	1	1
IDH2	SLC6A3	1	1
IDH2	SMARCA4	1	1
IDH2	SMOC1	1	1
IDH2	SRPX	1	1
IDH2	TCF12	1	1
IDH2	TP53	1	1
IDH2	TRERF1	1	1
IDH2	ZMIZ1	1	1
IDH2	ZNF512B	1	1
IDH2	ZNF709	1	1
IDH2	10p-Amp	1	1
IDH2	19p-Amp	1	1
IDH2	10p-Del	1	1
IDH2	10q-Del	1	1
IDH2	11p-Del	1	1
IDH2	12q-Del	1	1
IDH2	14q-Del	1	1
IDH2	15q-Del	1	1
IDH2	22q-Del	1	1
IDH2	6q-Del	1	1
IDH2	9q-Del	1	1
IDH2	Xp-Del	1	1
IDH2	Xq-Del	1	1
IDH2	Amp_1q22	1	1
IDH2	Amp_1q32.1	1	1
IDH2	Amp_2p24.3	1	1
IDH2	Amp_3q26.33	1	1
IDH2	Amp_4q12	1	1
IDH2	Amp_10p15.3	1	1
IDH2	Amp_12p13.32	1	1
IDH2	Amp_13q34	1	1
IDH2	Amp_17q25.1	1	1
IDH2	Amp_19p13.2	1	1
IDH2	Amp_Xp11.22	1	1
IDH2	Del_1q43	1	1
IDH2	Del_2q37.3	1	1
IDH2	Del_3q13.31	1	1
IDH2	Del_3q29	1	1
IDH2	Del_5p15.33	1	1
IDH2	Del_5q34	1	1
IDH2	Del_6p25.3	1	1
IDH2	Del_6q22.31	1	1
IDH2	Del_6q24.3	1	1
IDH2	Del_7p22.3	1	1
IDH2	Del_8q24.3	1	1
IDH2	Del_10q26.3	1	1
IDH2	Del_11p15.5	1	1
IDH2	Del_11p15.1	1	1
IDH2	Del_12q12	1	1
IDH2	Del_14q24.3	1	1
IDH2	Del_22q13.31	1	1
IDH2	Del_Xq21.1	1	1
IRS4	KRAS	1	1
IRS4	KRT3	1	1
IRS4	MED9	1	1
IRS4	NAP1L2	1	1
IRS4	NEU2	1	1
IRS4	NRAS	1	1
IRS4	PTPN11	1	1
IRS4	RBPJ	1	1
IRS4	SMOC1	1	1
IRS4	SRPX	1	1
IRS4	TCF12	1	1
IRS4	TMEM216	1	1
IRS4	ZNF709	1	1
IRS4	10p-Amp	1	1
IRS4	11q-Amp	1	1
IRS4	19p-Amp	1	1
IRS4	8q-Amp	1	1
IRS4	10p-Del	1	1
IRS4	10q-Del	1	1
IRS4	12q-Del	1	1
IRS4	15q-Del	1	1
IRS4	1p-Del	1	1
IRS4	4p-Del	1	1
IRS4	4q-Del	1	1
IRS4	9q-Del	1	1
IRS4	Xq-Del	1	1
IRS4	Amp_1q32.1	1	1
IRS4	Amp_2p24.3	1	1
IRS4	Amp_4q12	1	1
IRS4	Amp_11q24.1	1	1
IRS4	Amp_12q14.1	1	1
IRS4	Amp_13q34	1	1
IRS4	Amp_19p13.3	1	1
IRS4	Amp_19p13.2	1	1
IRS4	Amp_Xp11.22	1	1
IRS4	Del_1q43	1	1
IRS4	Del_3q13.31	1	1
IRS4	Del_3q29	1	1
IRS4	Del_4q34.3	1	1
IRS4	Del_5q34	1	1
IRS4	Del_7p22.3	1	1
IRS4	Del_10q26.3	1	1
IRS4	Del_12q12	1	1
IRS4	Del_13q14.2	1	1
IRS4	Del_Xq21.1	1	1
KRAS	KRT3	1	1
KRAS	MED9	1	1
KRAS	MYT1	1	1
KRAS	NAP1L2	1	1
KRAS	NEU2	1	1
KRAS	NF1	1	1
KRAS	NIPBL	1	1
KRAS	NOTCH1	1	1
KRAS	NRAS	1	1
KRAS	NUDT11	1	1
KRAS	PDGFRA	1	1
KRAS	PIK3CA	1	1
KRAS	PIK3R1	1	1
KRAS	PPL	1	1
KRAS	PRX	1	1
KRAS	PTEN	1	1
KRAS	PTPN11	1	1
KRAS	RB1	1	1
KRAS	RBBP6	1	1
KRAS	RBPJ	1	1
KRAS	RET	1	1
KRAS	ROBO3	1	1
KRAS	SCN4A	1	1
KRAS	SETD2	1	1
KRAS	SLC6A3	1	1
KRAS	SMARCA4	1	1
KRAS	SMOC1	1	1
KRAS	SRPX	1	1
KRAS	STK19	1	1
KRAS	TCF12	1	1
KRAS	TMEM216	1	1
KRAS	TNRC18	1	1
KRAS	TRERF1	1	1
KRAS	ZBTB20	1	1
KRAS	ZNF512B	1	1
KRAS	ZNF709	1	1
KRAS	10p-Amp	1	1
KRAS	19p-Amp	1	1
KRAS	7p-Amp	1	1
KRAS	7q-Amp	1	1
KRAS	8q-Amp	1	1
KRAS	10p-Del	1	1
KRAS	10q-Del	1	1
KRAS	11p-Del	1	1
KRAS	12q-Del	1	1
KRAS	13q-Del	1	1
KRAS	14q-Del	1	1
KRAS	15q-Del	1	1
KRAS	22q-Del	1	1
KRAS	4p-Del	1	1
KRAS	4q-Del	1	1
KRAS	6q-Del	1	1
KRAS	9p-Del	1	1
KRAS	9q-Del	1	1
KRAS	Xp-Del	1	1
KRAS	Xq-Del	1	1
KRAS	Amp_1q22	1	1
KRAS	Amp_1q32.1	1	1
KRAS	Amp_2p24.3	1	1
KRAS	Amp_3q26.33	1	1
KRAS	Amp_4q12	1	1
KRAS	Amp_7p11.2	1	1
KRAS	Amp_7q31.2	1	1
KRAS	Amp_7q32.3	1	1
KRAS	Amp_8q24.13	1	1
KRAS	Amp_10p15.3	1	1
KRAS	Amp_12p13.32	1	1
KRAS	Amp_12q14.1	1	1
KRAS	Amp_13q34	1	1
KRAS	Amp_17q25.1	1	1
KRAS	Amp_19p13.3	1	1
KRAS	Amp_19p13.2	1	1
KRAS	Amp_Xp11.22	1	1
KRAS	Del_1q43	1	1
KRAS	Del_2q37.3	1	1
KRAS	Del_3p21.31	1	1
KRAS	Del_3q13.31	1	1
KRAS	Del_3q29	1	1
KRAS	Del_4q34.3	1	1
KRAS	Del_5p15.33	1	1
KRAS	Del_5q34	1	1
KRAS	Del_6p25.3	1	1
KRAS	Del_6q22.31	1	1
KRAS	Del_6q24.3	1	1
KRAS	Del_7p22.3	1	1
KRAS	Del_8q24.3	1	1
KRAS	Del_9p23	1	1
KRAS	Del_9p21.3	1	1
KRAS	Del_10q26.3	1	1
KRAS	Del_11p15.5	1	1
KRAS	Del_11p15.1	1	1
KRAS	Del_12q12	1	1
KRAS	Del_13q14.2	1	1
KRAS	Del_14q24.3	1	1
KRAS	Del_22q13.31	1	1
KRAS	Del_Xq21.1	1	1
KRT3	MED9	1	1
KRT3	MYST4	1	1
KRT3	MYT1	1	1
KRT3	NAP1L2	1	1
KRT3	NEU2	1	1
KRT3	NIPBL	1	1
KRT3	NOTCH1	1	1
KRT3	NRAS	1	1
KRT3	NUDT11	1	1
KRT3	PDGFRA	1	1
KRT3	PIK3CA	1	1
KRT3	PIK3R1	1	1
KRT3	PLXNA3	1	1
KRT3	PPL	1	1
KRT3	PRX	1	1
KRT3	PTEN	1	1
KRT3	PTPN11	1	1
KRT3	RB1	1	1
KRT3	RBBP6	1	1
KRT3	RBPJ	1	1
KRT3	RET	1	1
KRT3	ROBO3	1	1
KRT3	SCN4A	1	1
KRT3	SETD2	1	1
KRT3	SLC6A3	1	1
KRT3	SMARCA4	1	1
KRT3	SMOC1	1	1
KRT3	SRPX	1	1
KRT3	STK19	1	1
KRT3	TCF12	1	1
KRT3	TMEM216	1	1
KRT3	TNRC18	1	1
KRT3	TRERF1	1	1
KRT3	ZBTB20	1	1
KRT3	ZMIZ1	1	1
KRT3	ZNF512B	1	1
KRT3	11q-Amp	1	1
KRT3	19p-Amp	1	1
KRT3	7p-Amp	1	1
KRT3	7q-Amp	1	1
KRT3	12q-Del	1	1
KRT3	13q-Del	1	1
KRT3	14q-Del	1	1
KRT3	15q-Del	1	1
KRT3	18p-Del	1	1
KRT3	18q-Del	1	1
KRT3	22q-Del	1	1
KRT3	4p-Del	1	1
KRT3	4q-Del	1	1
KRT3	6q-Del	1	1
KRT3	9p-Del	1	1
KRT3	9q-Del	1	1
KRT3	Xp-Del	1	1
KRT3	Xq-Del	1	1
KRT3	Amp_1q22	1	1
KRT3	Amp_1q32.1	1	1
KRT3	Amp_2p24.3	1	1
KRT3	Amp_3q26.33	1	1
KRT3	Amp_4q12	1	1
KRT3	Amp_7q31.2	1	1
KRT3	Amp_7q32.3	1	1
KRT3	Amp_11q24.1	1	1
KRT3	Amp_12p13.32	1	1
KRT3	Amp_13q34	1	1
KRT3	Amp_19p13.3	1	1
KRT3	Amp_19p13.2	1	1
KRT3	Amp_Xp11.22	1	1
KRT3	Del_1q43	1	1
KRT3	Del_3p21.31	1	1
KRT3	Del_3q13.31	1	1
KRT3	Del_3q29	1	1
KRT3	Del_5p15.33	1	1
KRT3	Del_6q22.31	1	1
KRT3	Del_6q24.3	1	1
KRT3	Del_8q24.3	1	1
KRT3	Del_12q12	1	1
KRT3	Del_13q14.2	1	1
KRT3	Del_14q24.3	1	1
KRT3	Del_22q13.31	1	1
KRT3	Del_Xq21.1	1	1
MED9	MYST4	1	1
MED9	MYT1	1	1
MED9	NAP1L2	1	1
MED9	NEU2	1	1
MED9	NIPBL	1	1
MED9	NOTCH1	1	1
MED9	NRAS	1	1
MED9	NUDT11	1	1
MED9	PDGFRA	1	1
MED9	PIK3CA	1	1
MED9	PIK3R1	1	1
MED9	PLXNA3	1	1
MED9	PPL	1	1
MED9	PRX	1	1
MED9	PTEN	1	1
MED9	PTPN11	1	1
MED9	RB1	1	1
MED9	RBBP6	1	1
MED9	RBPJ	1	1
MED9	RET	1	1
MED9	ROBO3	1	1
MED9	SCN4A	1	1
MED9	SETD2	1	1
MED9	SLC6A3	1	1
MED9	SMARCA4	1	1
MED9	SMOC1	1	1
MED9	SRPX	1	1
MED9	STK19	1	1
MED9	TCF12	1	1
MED9	TMEM216	1	1
MED9	TNRC18	1	1
MED9	TRERF1	1	1
MED9	ZBTB20	1	1
MED9	ZMIZ1	1	1
MED9	ZNF512B	1	1
MED9	ZNF709	1	1
MED9	10p-Amp	1	1
MED9	11q-Amp	1	1
MED9	19p-Amp	1	1
MED9	7p-Amp	1	1
MED9	7q-Amp	1	1
MED9	8q-Amp	1	1
MED9	11p-Del	1	1
MED9	12q-Del	1	1
MED9	15q-Del	1	1
MED9	18p-Del	1	1
MED9	18q-Del	1	1
MED9	4p-Del	1	1
MED9	4q-Del	1	1
MED9	9p-Del	1	1
MED9	9q-Del	1	1
MED9	Xp-Del	1	1
MED9	Xq-Del	1	1
MED9	Amp_1q22	1	1
MED9	Amp_1q32.1	1	1
MED9	Amp_2p24.3	1	1
MED9	Amp_3q26.33	1	1
MED9	Amp_4q12	1	1
MED9	Amp_7p11.2	1	1
MED9	Amp_7q31.2	1	1
MED9	Amp_7q32.3	1	1
MED9	Amp_8q24.13	1	1
MED9	Amp_10p15.3	1	1
MED9	Amp_11q24.1	1	1
MED9	Amp_12p13.32	1	1
MED9	Amp_12q14.1	1	1
MED9	Amp_13q34	1	1
MED9	Amp_17q25.1	1	1
MED9	Amp_19p13.3	1	1
MED9	Amp_19p13.2	1	1
MED9	Amp_Xp11.22	1	1
MED9	Del_1q43	1	1
MED9	Del_2q37.3	1	1
MED9	Del_3p21.31	1	1
MED9	Del_3q13.31	1	1
MED9	Del_3q29	1	1
MED9	Del_4q34.3	1	1
MED9	Del_5p15.33	1	1
MED9	Del_5q34	1	1
MED9	Del_7p22.3	1	1
MED9	Del_8q24.3	1	1
MED9	Del_9p23	1	1
MED9	Del_9p21.3	1	1
MED9	Del_11p15.5	1	1
MED9	Del_11p15.1	1	1
MED9	Del_12q12	1	1
MED9	Del_18q23	1	1
MED9	Del_Xq21.1	1	1
MYST4	NAP1L2	1	1
MYST4	NEU2	1	1
MYST4	NRAS	1	1
MYST4	PTPN11	1	1
MYST4	RBPJ	1	1
MYST4	ROBO3	1	1
MYST4	SMOC1	1	1
MYST4	SRPX	1	1
MYST4	TMEM216	1	1
MYST4	ZNF709	1	1
MYST4	10p-Amp	1	1
MYST4	19p-Amp	1	1
MYST4	11p-Del	1	1
MYST4	12q-Del	1	1
MYST4	15q-Del	1	1
MYST4	22q-Del	1	1
MYST4	4p-Del	1	1
MYST4	6q-Del	1	1
MYST4	9q-Del	1	1
MYST4	Xp-Del	1	1
MYST4	Xq-Del	1	1
MYST4	Amp_1q22	1	1
MYST4	Amp_1q32.1	1	1
MYST4	Amp_2p24.3	1	1
MYST4	Amp_3q26.33	1	1
MYST4	Amp_12p13.32	1	1
MYST4	Amp_12q14.1	1	1
MYST4	Amp_13q34	1	1
MYST4	Amp_17q25.1	1	1
MYST4	Amp_19p13.3	1	1
MYST4	Amp_19p13.2	1	1
MYST4	Amp_Xp11.22	1	1
MYST4	Del_1q43	1	1
MYST4	Del_3p21.31	1	1
MYST4	Del_3q13.31	1	1
MYST4	Del_3q29	1	1
MYST4	Del_5q34	1	1
MYST4	Del_6p25.3	1	1
MYST4	Del_6q22.31	1	1
MYST4	Del_6q24.3	1	1
MYST4	Del_7p22.3	1	1
MYST4	Del_8q24.3	1	1
MYST4	Del_12q12	1	1
MYST4	Del_22q13.31	1	1
MYST4	Del_Xq21.1	1	1
MYT1	NAP1L2	1	1
MYT1	NEU2	1	1
MYT1	NRAS	1	1
MYT1	PTPN11	1	1
MYT1	RBPJ	1	1
MYT1	ROBO3	1	1
MYT1	SMOC1	1	1
MYT1	SRPX	1	1
MYT1	TMEM216	1	1
MYT1	ZNF709	1	1
MYT1	11q-Amp	1	1
MYT1	19p-Amp	1	1
MYT1	10p-Del	1	1
MYT1	10q-Del	1	1
MYT1	14q-Del	1	1
MYT1	15q-Del	1	1
MYT1	18p-Del	1	1
MYT1	18q-Del	1	1
MYT1	19q-Del	1	1
MYT1	1p-Del	1	1
MYT1	22q-Del	1	1
MYT1	4p-Del	1	1
MYT1	6q-Del	1	1
MYT1	9q-Del	1	1
MYT1	Xp-Del	1	1
MYT1	Xq-Del	1	1
MYT1	Amp_1q22	1	1
MYT1	Amp_1q32.1	1	1
MYT1	Amp_2p24.3	1	1
MYT1	Amp_3q26.33	1	1
MYT1	Amp_4q12	1	1
MYT1	Amp_11q24.1	1	1
MYT1	Amp_12q14.1	1	1
MYT1	Amp_13q34	1	1
MYT1	Amp_19p13.3	1	1
MYT1	Amp_19p13.2	1	1
MYT1	Amp_Xp11.22	1	1
MYT1	Del_1p36.32	1	1
MYT1	Del_1p32.3	1	1
MYT1	Del_1q43	1	1
MYT1	Del_2q37.3	1	1
MYT1	Del_3q13.31	1	1
MYT1	Del_3q29	1	1
MYT1	Del_6p25.3	1	1
MYT1	Del_6q22.31	1	1
MYT1	Del_6q24.3	1	1
MYT1	Del_8q24.3	1	1
MYT1	Del_10q26.3	1	1
MYT1	Del_14q24.3	1	1
MYT1	Del_18q23	1	1
MYT1	Del_19q13.41	1	1
MYT1	Del_19q13.42	1	1
MYT1	Del_Xq21.1	1	1
NAP1L2	NEU2	1	1
NAP1L2	NF1	1	1
NAP1L2	NIPBL	1	1
NAP1L2	NRAS	1	1
NAP1L2	NUDT11	1	1
NAP1L2	PDGFRA	1	1
NAP1L2	PIK3CA	1	1
NAP1L2	PIK3R1	1	1
NAP1L2	PLXNA3	1	1
NAP1L2	PPL	1	1
NAP1L2	PRX	1	1
NAP1L2	PTEN	1	1
NAP1L2	PTPN11	1	1
NAP1L2	RB1	1	1
NAP1L2	RBBP6	1	1
NAP1L2	RET	1	1
NAP1L2	ROBO3	1	1
NAP1L2	SCN4A	1	1
NAP1L2	SETD2	1	1
NAP1L2	SLC6A3	1	1
NAP1L2	SMARCA4	1	1
NAP1L2	SMOC1	1	1
NAP1L2	SRPX	1	1
NAP1L2	STK19	1	1
NAP1L2	TCF12	1	1
NAP1L2	TMEM216	1	1
NAP1L2	TNRC18	1	1
NAP1L2	TRERF1	1	1
NAP1L2	ZBTB20	1	1
NAP1L2	ZMIZ1	1	1
NAP1L2	ZNF512B	1	1
NAP1L2	ZNF709	1	1
NAP1L2	10p-Amp	1	1
NAP1L2	11q-Amp	1	1
NAP1L2	19p-Amp	1	1
NAP1L2	7p-Amp	1	1
NAP1L2	7q-Amp	1	1
NAP1L2	8q-Amp	1	1
NAP1L2	10p-Del	1	1
NAP1L2	10q-Del	1	1
NAP1L2	11p-Del	1	1
NAP1L2	12q-Del	1	1
NAP1L2	13q-Del	1	1
NAP1L2	14q-Del	1	1
NAP1L2	18p-Del	1	1
NAP1L2	18q-Del	1	1
NAP1L2	22q-Del	1	1
NAP1L2	4p-Del	1	1
NAP1L2	4q-Del	1	1
NAP1L2	6q-Del	1	1
NAP1L2	9q-Del	1	1
NAP1L2	Xp-Del	1	1
NAP1L2	Xq-Del	1	1
NAP1L2	Amp_1q22	1	1
NAP1L2	Amp_1q32.1	1	1
NAP1L2	Amp_2p24.3	1	1
NAP1L2	Amp_3q26.33	1	1
NAP1L2	Amp_4q12	1	1
NAP1L2	Amp_7p11.2	1	1
NAP1L2	Amp_7q31.2	1	1
NAP1L2	Amp_7q32.3	1	1
NAP1L2	Amp_8q24.13	1	1
NAP1L2	Amp_10p15.3	1	1
NAP1L2	Amp_11q24.1	1	1
NAP1L2	Amp_12p13.32	1	1
NAP1L2	Amp_12q14.1	1	1
NAP1L2	Amp_13q34	1	1
NAP1L2	Amp_17q25.1	1	1
NAP1L2	Amp_19p13.2	1	1
NAP1L2	Amp_Xp11.22	1	1
NAP1L2	Del_1q43	1	1
NAP1L2	Del_2q37.3	1	1
NAP1L2	Del_3p21.31	1	1
NAP1L2	Del_3q13.31	1	1
NAP1L2	Del_3q29	1	1
NAP1L2	Del_4q34.3	1	1
NAP1L2	Del_5p15.33	1	1
NAP1L2	Del_6p25.3	1	1
NAP1L2	Del_6q22.31	1	1
NAP1L2	Del_6q24.3	1	1
NAP1L2	Del_7p22.3	1	1
NAP1L2	Del_8q24.3	1	1
NAP1L2	Del_11p15.5	1	1
NAP1L2	Del_11p15.1	1	1
NAP1L2	Del_12q12	1	1
NAP1L2	Del_13q14.2	1	1
NAP1L2	Del_14q24.3	1	1
NAP1L2	Del_22q13.31	1	1
NAP1L2	Del_Xq21.1	1	1
NEU2	NF1	1	1
NEU2	NIPBL	1	1
NEU2	NRAS	1	1
NEU2	PDGFRA	1	1
NEU2	PIK3R1	1	1
NEU2	PLXNA3	1	1
NEU2	PPL	1	1
NEU2	PTEN	1	1
NEU2	PTPN11	1	1
NEU2	RB1	1	1
NEU2	RBBP6	1	1
NEU2	RBPJ	1	1
NEU2	RET	1	1
NEU2	ROBO3	1	1
NEU2	SCN4A	1	1
NEU2	SLC6A3	1	1
NEU2	SMOC1	1	1
NEU2	SRPX	1	1
NEU2	STK19	1	1
NEU2	TCF12	1	1
NEU2	TMEM216	1	1
NEU2	TNRC18	1	1
NEU2	TRERF1	1	1
NEU2	ZBTB20	1	1
NEU2	ZMIZ1	1	1
NEU2	ZNF512B	1	1
NEU2	ZNF709	1	1
NEU2	10p-Amp	1	1
NEU2	11q-Amp	1	1
NEU2	19p-Amp	1	1
NEU2	7p-Amp	1	1
NEU2	8q-Amp	1	1
NEU2	10p-Del	1	1
NEU2	10q-Del	1	1
NEU2	11p-Del	1	1
NEU2	12q-Del	1	1
NEU2	13q-Del	1	1
NEU2	14q-Del	1	1
NEU2	15q-Del	1	1
NEU2	18p-Del	1	1
NEU2	18q-Del	1	1
NEU2	22q-Del	1	1
NEU2	4p-Del	1	1
NEU2	4q-Del	1	1
NEU2	6q-Del	1	1
NEU2	Xp-Del	1	1
NEU2	Xq-Del	1	1
NEU2	Amp_1q22	1	1
NEU2	Amp_1q32.1	1	1
NEU2	Amp_2p24.3	1	1
NEU2	Amp_3q26.33	1	1
NEU2	Amp_4q12	1	1
NEU2	Amp_7p11.2	1	1
NEU2	Amp_8q24.13	1	1
NEU2	Amp_10p15.3	1	1
NEU2	Amp_11q24.1	1	1
NEU2	Amp_12q14.1	1	1
NEU2	Amp_13q34	1	1
NEU2	Amp_17q25.1	1	1
NEU2	Amp_19p13.2	1	1
NEU2	Amp_Xp11.22	1	1
NEU2	Del_1q43	1	1
NEU2	Del_2q37.3	1	1
NEU2	Del_3p21.31	1	1
NEU2	Del_4q34.3	1	1
NEU2	Del_5p15.33	1	1
NEU2	Del_5q34	1	1
NEU2	Del_8q24.3	1	1
NEU2	Del_10q26.3	1	1
NEU2	Del_11p15.5	1	1
NEU2	Del_11p15.1	1	1
NEU2	Del_12q12	1	1
NEU2	Del_13q14.2	1	1
NEU2	Del_18q23	1	1
NEU2	Del_22q13.31	1	1
NEU2	Del_Xq21.1	1	1
NF1	NRAS	1	1
NF1	RBPJ	1	1
NF1	ROBO3	1	1
NF1	SMOC1	1	1
NF1	TCF12	1	1
NF1	TMEM216	1	1
NF1	TP53	1	1
NF1	11q-Amp	1	1
NF1	19p-Amp	1	1
NF1	8q-Amp	1	1
NF1	12q-Del	1	1
NF1	15q-Del	1	1
NF1	4p-Del	1	1
NF1	9q-Del	1	1
NF1	Xq-Del	1	1
NF1	Amp_2p24.3	1	1
NF1	Amp_4q12	1	1
NF1	Amp_11q24.1	1	1
NF1	Amp_12q14.1	1	1
NF1	Amp_13q34	1	1
NF1	Amp_19p13.3	1	1
NF1	Amp_19p13.2	1	1
NF1	Del_1q43	1	1
NF1	Del_3p21.31	1	1
NF1	Del_3q29	1	1
NF1	Del_5q34	1	1
NF1	Del_Xq21.1	1	1
NIPBL	PTPN11	1	1
NIPBL	RBPJ	1	1
NIPBL	ROBO3	1	1
NIPBL	SMOC1	1	1
NIPBL	SRPX	1	1
NIPBL	TCF12	1	1
NIPBL	TMEM216	1	1
NIPBL	ZNF709	1	1
NIPBL	10p-Amp	1	1
NIPBL	11q-Amp	1	1
NIPBL	8q-Amp	1	1
NIPBL	12q-Del	1	1
NIPBL	13q-Del	1	1
NIPBL	14q-Del	1	1
NIPBL	22q-Del	1	1
NIPBL	6q-Del	1	1
NIPBL	Xp-Del	1	1
NIPBL	Xq-Del	1	1
NIPBL	Amp_1q22	1	1
NIPBL	Amp_2p24.3	1	1
NIPBL	Amp_3q26.33	1	1
NIPBL	Amp_4q12	1	1
NIPBL	Amp_8q24.13	1	1
NIPBL	Amp_10p15.3	1	1
NIPBL	Amp_11q24.1	1	1
NIPBL	Amp_12p13.32	1	1
NIPBL	Amp_17q25.1	1	1
NIPBL	Amp_Xp11.22	1	1
NIPBL	Del_1q43	1	1
NIPBL	Del_2q37.3	1	1
NIPBL	Del_3p21.31	1	1
NIPBL	Del_3q13.31	1	1
NIPBL	Del_3q29	1	1
NIPBL	Del_5p15.33	1	1
NIPBL	Del_5q34	1	1
NIPBL	Del_6p25.3	1	1
NIPBL	Del_7p22.3	1	1
NIPBL	Del_8q24.3	1	1
NIPBL	Del_12q12	1	1
NIPBL	Del_13q14.2	1	1
NIPBL	Del_14q24.3	1	1
NIPBL	Del_22q13.31	1	1
NIPBL	Del_Xq21.1	1	1
NOTCH1	PTPN11	1	1
NOTCH1	RBPJ	1	1
NOTCH1	SMOC1	1	1
NOTCH1	TMEM216	1	1
NOTCH1	19p-Amp	1	1
NOTCH1	8q-Amp	1	1
NOTCH1	10p-Del	1	1
NOTCH1	10q-Del	1	1
NOTCH1	12q-Del	1	1
NOTCH1	22q-Del	1	1
NOTCH1	Xp-Del	1	1
NOTCH1	Xq-Del	1	1
NOTCH1	Amp_1q22	1	1
NOTCH1	Amp_1q32.1	1	1
NOTCH1	Amp_3q26.33	1	1
NOTCH1	Amp_12p13.32	1	1
NOTCH1	Amp_12q14.1	1	1
NOTCH1	Amp_13q34	1	1
NOTCH1	Amp_17q25.1	1	1
NOTCH1	Del_3q13.31	1	1
NOTCH1	Del_3q29	1	1
NOTCH1	Del_5p15.33	1	1
NOTCH1	Del_5q34	1	1
NOTCH1	Del_8q24.3	1	1
NOTCH1	Del_22q13.31	1	1
NRAS	PDGFRA	1	1
NRAS	PIK3CA	1	1
NRAS	PIK3R1	1	1
NRAS	PLXNA3	1	1
NRAS	PPL	1	1
NRAS	PTEN	1	1
NRAS	PTPN11	1	1
NRAS	RB1	1	1
NRAS	RBBP6	1	1
NRAS	RBPJ	1	1
NRAS	RET	1	1
NRAS	ROBO3	1	1
NRAS	SCN4A	1	1
NRAS	SETD2	1	1
NRAS	SLC6A3	1	1
NRAS	SMARCA4	1	1
NRAS	SMOC1	1	1
NRAS	SRPX	1	1
NRAS	STK19	1	1
NRAS	TCF12	1	1
NRAS	TMEM216	1	1
NRAS	TNRC18	1	1
NRAS	TRERF1	1	1
NRAS	ZBTB20	1	1
NRAS	ZMIZ1	1	1
NRAS	ZNF512B	1	1
NRAS	ZNF709	1	1
NRAS	11q-Amp	1	1
NRAS	19p-Amp	1	1
NRAS	7p-Amp	1	1
NRAS	7q-Amp	1	1
NRAS	8q-Amp	1	1
NRAS	10p-Del	1	1
NRAS	10q-Del	1	1
NRAS	11p-Del	1	1
NRAS	12q-Del	1	1
NRAS	14q-Del	1	1
NRAS	15q-Del	1	1
NRAS	18p-Del	1	1
NRAS	18q-Del	1	1
NRAS	4p-Del	1	1
NRAS	6q-Del	1	1
NRAS	9q-Del	1	1
NRAS	Xp-Del	1	1
NRAS	Xq-Del	1	1
NRAS	Amp_1q22	1	1
NRAS	Amp_1q32.1	1	1
NRAS	Amp_2p24.3	1	1
NRAS	Amp_3q26.33	1	1
NRAS	Amp_4q12	1	1
NRAS	Amp_7p11.2	1	1
NRAS	Amp_7q31.2	1	1
NRAS	Amp_7q32.3	1	1
NRAS	Amp_8q24.13	1	1
NRAS	Amp_11q24.1	1	1
NRAS	Amp_12q14.1	1	1
NRAS	Amp_13q34	1	1
NRAS	Amp_17q25.1	1	1
NRAS	Amp_19p13.3	1	1
NRAS	Amp_19p13.2	1	1
NRAS	Amp_Xp11.22	1	1
NRAS	Del_1q43	1	1
NRAS	Del_2q37.3	1	1
NRAS	Del_3q13.31	1	1
NRAS	Del_5p15.33	1	1
NRAS	Del_5q34	1	1
NRAS	Del_6p25.3	1	1
NRAS	Del_6q22.31	1	1
NRAS	Del_6q24.3	1	1
NRAS	Del_7p22.3	1	1
NRAS	Del_8q24.3	1	1
NRAS	Del_10q26.3	1	1
NRAS	Del_12q12	1	1
NRAS	Del_18q23	1	1
NRAS	Del_Xq21.1	1	1
NUDT11	PTPN11	1	1
NUDT11	RBPJ	1	1
NUDT11	ROBO3	1	1
NUDT11	SMOC1	1	1
NUDT11	SRPX	1	1
NUDT11	TCF12	1	1
NUDT11	TMEM216	1	1
NUDT11	11q-Amp	1	1
NUDT11	19p-Amp	1	1
NUDT11	10p-Del	1	1
NUDT11	10q-Del	1	1
NUDT11	12q-Del	1	1
NUDT11	14q-Del	1	1
NUDT11	15q-Del	1	1
NUDT11	18p-Del	1	1
NUDT11	18q-Del	1	1
NUDT11	4p-Del	1	1
NUDT11	6q-Del	1	1
NUDT11	9q-Del	1	1
NUDT11	Xp-Del	1	1
NUDT11	Xq-Del	1	1
NUDT11	Amp_1q22	1	1
NUDT11	Amp_1q32.1	1	1
NUDT11	Amp_2p24.3	1	1
NUDT11	Amp_3q26.33	1	1
NUDT11	Amp_11q24.1	1	1
NUDT11	Amp_12q14.1	1	1
NUDT11	Amp_13q34	1	1
NUDT11	Amp_17q25.1	1	1
NUDT11	Amp_19p13.2	1	1
NUDT11	Del_2q37.3	1	1
NUDT11	Del_3q13.31	1	1
NUDT11	Del_5p15.33	1	1
NUDT11	Del_5q34	1	1
NUDT11	Del_6q22.31	1	1
NUDT11	Del_6q24.3	1	1
NUDT11	Del_7p22.3	1	1
NUDT11	Del_8q24.3	1	1
NUDT11	Del_10q26.3	1	1
NUDT11	Del_18q23	1	1
NUDT11	Del_Xq21.1	1	1
PDGFRA	PTPN11	1	1
PDGFRA	ROBO3	1	1
PDGFRA	SMOC1	1	1
PDGFRA	SRPX	1	1
PDGFRA	TCF12	1	1
PDGFRA	TMEM216	1	1
PDGFRA	ZNF709	1	1
PDGFRA	11q-Amp	1	1
PDGFRA	19p-Amp	1	1
PDGFRA	8q-Amp	1	1
PDGFRA	15q-Del	1	1
PDGFRA	18p-Del	1	1
PDGFRA	18q-Del	1	1
PDGFRA	22q-Del	1	1
PDGFRA	4p-Del	1	1
PDGFRA	6q-Del	1	1
PDGFRA	Xp-Del	1	1
PDGFRA	Xq-Del	1	1
PDGFRA	Amp_1q22	1	1
PDGFRA	Amp_1q32.1	1	1
PDGFRA	Amp_2p24.3	1	1
PDGFRA	Amp_3q26.33	1	1
PDGFRA	Amp_8q24.13	1	1
PDGFRA	Amp_11q24.1	1	1
PDGFRA	Amp_13q34	1	1
PDGFRA	Amp_17q25.1	1	1
PDGFRA	Amp_19p13.3	1	1
PDGFRA	Amp_19p13.2	1	1
PDGFRA	Amp_Xp11.22	1	1
PDGFRA	Del_1q43	1	1
PDGFRA	Del_2q37.3	1	1
PDGFRA	Del_7p22.3	1	1
PDGFRA	Del_22q13.31	1	1
PIK3CA	RBPJ	1	1
PIK3CA	ROBO3	1	1
PIK3CA	SMOC1	1	1
PIK3CA	TMEM216	1	1
PIK3CA	TP53	1	1
PIK3CA	8q-Amp	1	1
PIK3CA	Xp-Del	1	1
PIK3CA	Xq-Del	1	1
PIK3CA	Amp_1q22	1	1
PIK3CA	Amp_1q32.1	1	1
PIK3CA	Amp_2p24.3	1	1
PIK3CA	Amp_8q24.13	1	1
PIK3CA	Amp_12p13.32	1	1
PIK3CA	Amp_Xp11.22	1	1
PIK3CA	Del_1q43	1	1
PIK3CA	Del_2q37.3	1	1
PIK3CA	Del_3q29	1	1
PIK3CA	Del_6p25.3	1	1
PIK3CA	Del_Xq21.1	1	1
PIK3R1	PTPN11	1	1
PIK3R1	RBPJ	1	1
PIK3R1	ROBO3	1	1
PIK3R1	SRPX	1	1
PIK3R1	TCF12	1	1
PIK3R1	TMEM216	1	1
PIK3R1	ZNF709	1	1
PIK3R1	10p-Amp	1	1
PIK3R1	19p-Amp	1	1
PIK3R1	8q-Amp	1	1
PIK3R1	11p-Del	1	1
PIK3R1	4p-Del	1	1
PIK3R1	4q-Del	1	1
PIK3R1	Xp-Del	1	1
PIK3R1	Xq-Del	1	1
PIK3R1	Amp_1q22	1	1
PIK3R1	Amp_1q32.1	1	1
PIK3R1	Amp_2p24.3	1	1
PIK3R1	Amp_4q12	1	1
PIK3R1	Amp_8q24.13	1	1
PIK3R1	Amp_10p15.3	1	1
PIK3R1	Amp_12p13.32	1	1
PIK3R1	Amp_12q14.1	1	1
PIK3R1	Amp_17q25.1	1	1
PIK3R1	Amp_19p13.2	1	1
PIK3R1	Amp_Xp11.22	1	1
PIK3R1	Del_1q43	1	1
PIK3R1	Del_3q13.31	1	1
PIK3R1	Del_3q29	1	1
PIK3R1	Del_5p15.33	1	1
PIK3R1	Del_7p22.3	1	1
PIK3R1	Del_Xq21.1	1	1
PLXNA3	PTPN11	1	1
PLXNA3	RBPJ	1	1
PLXNA3	ROBO3	1	1
PLXNA3	SMOC1	1	1
PLXNA3	SRPX	1	1
PLXNA3	TCF12	1	1
PLXNA3	TMEM216	1	1
PLXNA3	ZNF709	1	1
PLXNA3	10p-Amp	1	1
PLXNA3	8q-Amp	1	1
PLXNA3	11p-Del	1	1
PLXNA3	12q-Del	1	1
PLXNA3	14q-Del	1	1
PLXNA3	15q-Del	1	1
PLXNA3	22q-Del	1	1
PLXNA3	4p-Del	1	1
PLXNA3	4q-Del	1	1
PLXNA3	9q-Del	1	1
PLXNA3	Xp-Del	1	1
PLXNA3	Xq-Del	1	1
PLXNA3	Amp_1q22	1	1
PLXNA3	Amp_2p24.3	1	1
PLXNA3	Amp_3q26.33	1	1
PLXNA3	Amp_4q12	1	1
PLXNA3	Amp_8q24.13	1	1
PLXNA3	Amp_12q14.1	1	1
PLXNA3	Amp_13q34	1	1
PLXNA3	Amp_17q25.1	1	1
PLXNA3	Amp_19p13.3	1	1
PLXNA3	Amp_Xp11.22	1	1
PLXNA3	Del_1q43	1	1
PLXNA3	Del_2q37.3	1	1
PLXNA3	Del_3p21.31	1	1
PLXNA3	Del_3q13.31	1	1
PLXNA3	Del_3q29	1	1
PLXNA3	Del_5p15.33	1	1
PLXNA3	Del_5q34	1	1
PLXNA3	Del_6p25.3	1	1
PLXNA3	Del_7p22.3	1	1
PLXNA3	Del_11p15.5	1	1
PLXNA3	Del_11p15.1	1	1
PLXNA3	Del_12q12	1	1
PLXNA3	Del_22q13.31	1	1
PLXNA3	Del_Xq21.1	1	1
PPL	RBPJ	1	1
PPL	ROBO3	1	1
PPL	SMOC1	1	1
PPL	SRPX	1	1
PPL	TCF12	1	1
PPL	TMEM216	1	1
PPL	ZNF709	1	1
PPL	10p-Amp	1	1
PPL	11q-Amp	1	1
PPL	19p-Amp	1	1
PPL	10p-Del	1	1
PPL	10q-Del	1	1
PPL	11p-Del	1	1
PPL	12q-Del	1	1
PPL	13q-Del	1	1
PPL	14q-Del	1	1
PPL	15q-Del	1	1
PPL	18p-Del	1	1
PPL	18q-Del	1	1
PPL	22q-Del	1	1
PPL	4p-Del	1	1
PPL	4q-Del	1	1
PPL	6q-Del	1	1
PPL	9p-Del	1	1
PPL	9q-Del	1	1
PPL	Xp-Del	1	1
PPL	Xq-Del	1	1
PPL	Amp_1q22	1	1
PPL	Amp_1q32.1	1	1
PPL	Amp_2p24.3	1	1
PPL	Amp_3q26.33	1	1
PPL	Amp_4q12	1	1
PPL	Amp_10p15.3	1	1
PPL	Amp_12p13.32	1	1
PPL	Amp_12q14.1	1	1
PPL	Amp_13q34	1	1
PPL	Amp_17q25.1	1	1
PPL	Amp_19p13.3	1	1
PPL	Amp_19p13.2	1	1
PPL	Del_1q43	1	1
PPL	Del_2q37.3	1	1
PPL	Del_3p21.31	1	1
PPL	Del_3q13.31	1	1
PPL	Del_4q34.3	1	1
PPL	Del_5p15.33	1	1
PPL	Del_5q34	1	1
PPL	Del_6q22.31	1	1
PPL	Del_6q24.3	1	1
PPL	Del_7p22.3	1	1
PPL	Del_9p21.3	1	1
PPL	Del_11p15.5	1	1
PPL	Del_11p15.1	1	1
PPL	Del_12q12	1	1
PPL	Del_13q14.2	1	1
PPL	Del_18q23	1	1
PPL	Del_22q13.31	1	1
PRX	PTPN11	1	1
PRX	RBPJ	1	1
PRX	ROBO3	1	1
PRX	SMOC1	1	1
PRX	SRPX	1	1
PRX	TCF12	1	1
PRX	TMEM216	1	1
PRX	ZNF709	1	1
PRX	11q-Amp	1	1
PRX	11p-Del	1	1
PRX	12q-Del	1	1
PRX	4p-Del	1	1
PRX	9q-Del	1	1
PRX	Xq-Del	1	1
PRX	Amp_1q22	1	1
PRX	Amp_2p24.3	1	1
PRX	Amp_3q26.33	1	1
PRX	Amp_11q24.1	1	1
PRX	Amp_12q14.1	1	1
PRX	Amp_13q34	1	1
PRX	Amp_17q25.1	1	1
PRX	Amp_Xp11.22	1	1
PRX	Del_1q43	1	1
PRX	Del_2q37.3	1	1
PRX	Del_3q13.31	1	1
PRX	Del_5q34	1	1
PRX	Del_7p22.3	1	1
PRX	Del_12q12	1	1
PRX	Del_Xq21.1	1	1
PTEN	RBPJ	1	1
PTEN	ROBO3	1	1
PTEN	SMOC1	1	1
PTEN	SRPX	1	1
PTEN	TMEM216	1	1
PTEN	TP53	1	1
PTEN	ZNF709	1	1
PTEN	11q-Amp	1	1
PTEN	8q-Amp	1	1
PTEN	12q-Del	1	1
PTEN	19q-Del	1	1
PTEN	1p-Del	1	1
PTEN	Amp_1q22	1	1
PTEN	Amp_2p24.3	1	1
PTEN	Amp_8q24.13	1	1
PTEN	Amp_12p13.32	1	1
PTEN	Amp_13q34	1	1
PTEN	Amp_17q25.1	1	1
PTEN	Amp_Xp11.22	1	1
PTEN	Del_1q43	1	1
PTEN	Del_7p22.3	1	1
PTEN	Del_12q12	1	1
PTEN	Del_19q13.41	1	1
PTEN	Del_19q13.42	1	1
PTEN	Del_Xq21.1	1	1
PTPN11	RB1	1	1
PTPN11	RBBP6	1	1
PTPN11	RBPJ	1	1
PTPN11	RET	1	1
PTPN11	ROBO3	1	1
PTPN11	SCN4A	1	1
PTPN11	SETD2	1	1
PTPN11	SLC6A3	1	1
PTPN11	SMARCA4	1	1
PTPN11	SMOC1	1	1
PTPN11	SRPX	1	1
PTPN11	STK19	1	1
PTPN11	TCF12	1	1
PTPN11	TMEM216	1	1
PTPN11	TNRC18	1	1
PTPN11	TRERF1	1	1
PTPN11	ZBTB20	1	1
PTPN11	ZMIZ1	1	1
PTPN11	ZNF512B	1	1
PTPN11	ZNF709	1	1
PTPN11	10p-Amp	1	1
PTPN11	11q-Amp	1	1
PTPN11	19p-Amp	1	1
PTPN11	8q-Amp	1	1
PTPN11	11p-Del	1	1
PTPN11	12q-Del	1	1
PTPN11	14q-Del	1	1
PTPN11	15q-Del	1	1
PTPN11	18p-Del	1	1
PTPN11	18q-Del	1	1
PTPN11	4p-Del	1	1
PTPN11	4q-Del	1	1
PTPN11	6q-Del	1	1
PTPN11	9q-Del	1	1
PTPN11	Xp-Del	1	1
PTPN11	Xq-Del	1	1
PTPN11	Amp_1q22	1	1
PTPN11	Amp_2p24.3	1	1
PTPN11	Amp_8q24.13	1	1
PTPN11	Amp_10p15.3	1	1
PTPN11	Amp_11q24.1	1	1
PTPN11	Amp_12p13.32	1	1
PTPN11	Amp_13q34	1	1
PTPN11	Amp_17q25.1	1	1
PTPN11	Amp_19p13.3	1	1
PTPN11	Amp_19p13.2	1	1
PTPN11	Amp_Xp11.22	1	1
PTPN11	Del_1q43	1	1
PTPN11	Del_2q37.3	1	1
PTPN11	Del_3p21.31	1	1
PTPN11	Del_3q13.31	1	1
PTPN11	Del_4q34.3	1	1
PTPN11	Del_5p15.33	1	1
PTPN11	Del_5q34	1	1
PTPN11	Del_6p25.3	1	1
PTPN11	Del_6q22.31	1	1
PTPN11	Del_6q24.3	1	1
PTPN11	Del_7p22.3	1	1
PTPN11	Del_11p15.5	1	1
PTPN11	Del_11p15.1	1	1
PTPN11	Del_12q12	1	1
PTPN11	Del_14q24.3	1	1
PTPN11	Del_18q23	1	1
PTPN11	Del_Xq21.1	1	1
RB1	RBPJ	1	1
RB1	ROBO3	1	1
RB1	SMOC1	1	1
RB1	SRPX	1	1
RB1	TCF12	1	1
RB1	TMEM216	1	1
RB1	ZNF709	1	1
RB1	10p-Amp	1	1
RB1	11q-Amp	1	1
RB1	19p-Amp	1	1
RB1	8q-Amp	1	1
RB1	11p-Del	1	1
RB1	12q-Del	1	1
RB1	15q-Del	1	1
RB1	4p-Del	1	1
RB1	4q-Del	1	1
RB1	9q-Del	1	1
RB1	Xp-Del	1	1
RB1	Xq-Del	1	1
RB1	Amp_1q22	1	1
RB1	Amp_2p24.3	1	1
RB1	Amp_3q26.33	1	1
RB1	Amp_4q12	1	1
RB1	Amp_8q24.13	1	1
RB1	Amp_10p15.3	1	1
RB1	Amp_11q24.1	1	1
RB1	Amp_12p13.32	1	1
RB1	Amp_12q14.1	1	1
RB1	Amp_13q34	1	1
RB1	Amp_17q25.1	1	1
RB1	Amp_19p13.3	1	1
RB1	Amp_19p13.2	1	1
RB1	Amp_Xp11.22	1	1
RB1	Del_1q43	1	1
RB1	Del_3p21.31	1	1
RB1	Del_3q13.31	1	1
RB1	Del_3q29	1	1
RB1	Del_5p15.33	1	1
RB1	Del_5q34	1	1
RB1	Del_6p25.3	1	1
RB1	Del_7p22.3	1	1
RB1	Del_8q24.3	1	1
RB1	Del_11p15.5	1	1
RB1	Del_11p15.1	1	1
RB1	Del_12q12	1	1
RB1	Del_Xq21.1	1	1
RBBP6	RBPJ	1	1
RBBP6	ROBO3	1	1
RBBP6	SMOC1	1	1
RBBP6	SRPX	1	1
RBBP6	TCF12	1	1
RBBP6	TMEM216	1	1
RBBP6	ZNF709	1	1
RBBP6	10p-Amp	1	1
RBBP6	11q-Amp	1	1
RBBP6	19p-Amp	1	1
RBBP6	8q-Amp	1	1
RBBP6	10p-Del	1	1
RBBP6	10q-Del	1	1
RBBP6	12q-Del	1	1
RBBP6	14q-Del	1	1
RBBP6	15q-Del	1	1
RBBP6	18p-Del	1	1
RBBP6	18q-Del	1	1
RBBP6	22q-Del	1	1
RBBP6	4p-Del	1	1
RBBP6	6q-Del	1	1
RBBP6	9p-Del	1	1
RBBP6	9q-Del	1	1
RBBP6	Xp-Del	1	1
RBBP6	Xq-Del	1	1
RBBP6	Amp_1q32.1	1	1
RBBP6	Amp_2p24.3	1	1
RBBP6	Amp_3q26.33	1	1
RBBP6	Amp_4q12	1	1
RBBP6	Amp_10p15.3	1	1
RBBP6	Amp_11q24.1	1	1
RBBP6	Amp_12p13.32	1	1
RBBP6	Amp_13q34	1	1
RBBP6	Amp_17q25.1	1	1
RBBP6	Amp_19p13.3	1	1
RBBP6	Amp_19p13.2	1	1
RBBP6	Amp_Xp11.22	1	1
RBBP6	Del_1q43	1	1
RBBP6	Del_2q37.3	1	1
RBBP6	Del_3p21.31	1	1
RBBP6	Del_3q13.31	1	1
RBBP6	Del_5p15.33	1	1
RBBP6	Del_5q34	1	1
RBBP6	Del_6p25.3	1	1
RBBP6	Del_6q22.31	1	1
RBBP6	Del_6q24.3	1	1
RBBP6	Del_7p22.3	1	1
RBBP6	Del_8q24.3	1	1
RBBP6	Del_9p23	1	1
RBBP6	Del_9p21.3	1	1
RBBP6	Del_12q12	1	1
RBBP6	Del_18q23	1	1
RBBP6	Del_22q13.31	1	1
RBBP6	Del_Xq21.1	1	1
RBPJ	ROBO3	1	1
RBPJ	SCN4A	1	1
RBPJ	SETD2	1	1
RBPJ	SLC6A3	1	1
RBPJ	SMARCA4	1	1
RBPJ	SMOC1	1	1
RBPJ	SRPX	1	1
RBPJ	STK19	1	1
RBPJ	TCF12	1	1
RBPJ	TNRC18	1	1
RBPJ	TRERF1	1	1
RBPJ	ZMIZ1	1	1
RBPJ	ZNF512B	1	1
RBPJ	ZNF709	1	1
RBPJ	11q-Amp	1	1
RBPJ	19p-Amp	1	1
RBPJ	8q-Amp	1	1
RBPJ	10p-Del	1	1
RBPJ	10q-Del	1	1
RBPJ	11p-Del	1	1
RBPJ	12q-Del	1	1
RBPJ	14q-Del	1	1
RBPJ	15q-Del	1	1
RBPJ	22q-Del	1	1
RBPJ	6q-Del	1	1
RBPJ	Xp-Del	1	1
RBPJ	Xq-Del	1	1
RBPJ	Amp_1q22	1	1
RBPJ	Amp_1q32.1	1	1
RBPJ	Amp_2p24.3	1	1
RBPJ	Amp_3q26.33	1	1
RBPJ	Amp_8q24.13	1	1
RBPJ	Amp_11q24.1	1	1
RBPJ	Amp_12p13.32	1	1
RBPJ	Amp_12q14.1	1	1
RBPJ	Amp_13q34	1	1
RBPJ	Amp_17q25.1	1	1
RBPJ	Amp_19p13.3	1	1
RBPJ	Amp_19p13.2	1	1
RBPJ	Amp_Xp11.22	1	1
RBPJ	Del_1q43	1	1
RBPJ	Del_2q37.3	1	1
RBPJ	Del_3p21.31	1	1
RBPJ	Del_3q13.31	1	1
RBPJ	Del_3q29	1	1
RBPJ	Del_5p15.33	1	1
RBPJ	Del_7p22.3	1	1
RBPJ	Del_8q24.3	1	1
RBPJ	Del_11p15.5	1	1
RBPJ	Del_11p15.1	1	1
RBPJ	Del_12q12	1	1
RBPJ	Del_14q24.3	1	1
RBPJ	Del_22q13.31	1	1
RBPJ	Del_Xq21.1	1	1
RET	ROBO3	1	1
RET	SMOC1	1	1
RET	SRPX	1	1
RET	TCF12	1	1
RET	TMEM216	1	1
RET	ZNF709	1	1
RET	10p-Amp	1	1
RET	11q-Amp	1	1
RET	19p-Amp	1	1
RET	8q-Amp	1	1
RET	11p-Del	1	1
RET	12q-Del	1	1
RET	15q-Del	1	1
RET	6q-Del	1	1
RET	9p-Del	1	1
RET	9q-Del	1	1
RET	Xp-Del	1	1
RET	Xq-Del	1	1
RET	Amp_1q32.1	1	1
RET	Amp_2p24.3	1	1
RET	Amp_3q26.33	1	1
RET	Amp_4q12	1	1
RET	Amp_8q24.13	1	1
RET	Amp_10p15.3	1	1
RET	Amp_11q24.1	1	1
RET	Amp_12p13.32	1	1
RET	Amp_12q14.1	1	1
RET	Amp_13q34	1	1
RET	Amp_17q25.1	1	1
RET	Amp_19p13.3	1	1
RET	Amp_19p13.2	1	1
RET	Amp_Xp11.22	1	1
RET	Del_1q43	1	1
RET	Del_3p21.31	1	1
RET	Del_3q13.31	1	1
RET	Del_3q29	1	1
RET	Del_5p15.33	1	1
RET	Del_5q34	1	1
RET	Del_6p25.3	1	1
RET	Del_6q22.31	1	1
RET	Del_6q24.3	1	1
RET	Del_7p22.3	1	1
RET	Del_8q24.3	1	1
RET	Del_11p15.5	1	1
RET	Del_11p15.1	1	1
RET	Del_12q12	1	1
RET	Del_Xq21.1	1	1
ROBO3	SETD2	1	1
ROBO3	SLC6A3	1	1
ROBO3	SMOC1	1	1
ROBO3	SRPX	1	1
ROBO3	TCF12	1	1
ROBO3	TMEM216	1	1
ROBO3	TNRC18	1	1
ROBO3	TRERF1	1	1
ROBO3	ZBTB20	1	1
ROBO3	ZNF512B	1	1
ROBO3	ZNF709	1	1
ROBO3	11q-Amp	1	1
ROBO3	19p-Amp	1	1
ROBO3	7p-Amp	1	1
ROBO3	7q-Amp	1	1
ROBO3	8q-Amp	1	1
ROBO3	10p-Del	1	1
ROBO3	10q-Del	1	1
ROBO3	11p-Del	1	1
ROBO3	12q-Del	1	1
ROBO3	13q-Del	1	1
ROBO3	14q-Del	1	1
ROBO3	15q-Del	1	1
ROBO3	18p-Del	1	1
ROBO3	18q-Del	1	1
ROBO3	22q-Del	1	1
ROBO3	4p-Del	1	1
ROBO3	4q-Del	1	1
ROBO3	9q-Del	1	1
ROBO3	Xp-Del	1	1
ROBO3	Xq-Del	1	1
ROBO3	Amp_1q22	1	1
ROBO3	Amp_1q32.1	1	1
ROBO3	Amp_4q12	1	1
ROBO3	Amp_7p11.2	1	1
ROBO3	Amp_7q31.2	1	1
ROBO3	Amp_7q32.3	1	1
ROBO3	Amp_8q24.13	1	1
ROBO3	Amp_12p13.32	1	1
ROBO3	Amp_12q14.1	1	1
ROBO3	Amp_13q34	1	1
ROBO3	Amp_17q25.1	1	1
ROBO3	Amp_19p13.3	1	1
ROBO3	Amp_19p13.2	1	1
ROBO3	Amp_Xp11.22	1	1
ROBO3	Del_1q43	1	1
ROBO3	Del_2q37.3	1	1
ROBO3	Del_3p21.31	1	1
ROBO3	Del_3q13.31	1	1
ROBO3	Del_3q29	1	1
ROBO3	Del_4q34.3	1	1
ROBO3	Del_5p15.33	1	1
ROBO3	Del_5q34	1	1
ROBO3	Del_6p25.3	1	1
ROBO3	Del_8q24.3	1	1
ROBO3	Del_10q26.3	1	1
ROBO3	Del_11p15.5	1	1
ROBO3	Del_11p15.1	1	1
ROBO3	Del_12q12	1	1
ROBO3	Del_13q14.2	1	1
ROBO3	Del_22q13.31	1	1
ROBO3	Del_Xq21.1	1	1
SCN4A	SMOC1	1	1
SCN4A	SRPX	1	1
SCN4A	TCF12	1	1
SCN4A	TMEM216	1	1
SCN4A	ZNF709	1	1
SCN4A	10p-Amp	1	1
SCN4A	11q-Amp	1	1
SCN4A	19p-Amp	1	1
SCN4A	8q-Amp	1	1
SCN4A	10p-Del	1	1
SCN4A	10q-Del	1	1
SCN4A	11p-Del	1	1
SCN4A	12q-Del	1	1
SCN4A	13q-Del	1	1
SCN4A	14q-Del	1	1
SCN4A	15q-Del	1	1
SCN4A	18p-Del	1	1
SCN4A	18q-Del	1	1
SCN4A	22q-Del	1	1
SCN4A	4p-Del	1	1
SCN4A	4q-Del	1	1
SCN4A	9q-Del	1	1
SCN4A	Xp-Del	1	1
SCN4A	Xq-Del	1	1
SCN4A	Amp_1q22	1	1
SCN4A	Amp_1q32.1	1	1
SCN4A	Amp_3q26.33	1	1
SCN4A	Amp_4q12	1	1
SCN4A	Amp_8q24.13	1	1
SCN4A	Amp_10p15.3	1	1
SCN4A	Amp_11q24.1	1	1
SCN4A	Amp_12p13.32	1	1
SCN4A	Amp_12q14.1	1	1
SCN4A	Amp_13q34	1	1
SCN4A	Amp_17q25.1	1	1
SCN4A	Amp_19p13.3	1	1
SCN4A	Amp_19p13.2	1	1
SCN4A	Amp_Xp11.22	1	1
SCN4A	Del_1q43	1	1
SCN4A	Del_2q37.3	1	1
SCN4A	Del_3p21.31	1	1
SCN4A	Del_3q13.31	1	1
SCN4A	Del_3q29	1	1
SCN4A	Del_4q34.3	1	1
SCN4A	Del_5p15.33	1	1
SCN4A	Del_5q34	1	1
SCN4A	Del_6p25.3	1	1
SCN4A	Del_8q24.3	1	1
SCN4A	Del_10q26.3	1	1
SCN4A	Del_11p15.5	1	1
SCN4A	Del_11p15.1	1	1
SCN4A	Del_12q12	1	1
SCN4A	Del_13q14.2	1	1
SCN4A	Del_18q23	1	1
SCN4A	Del_22q13.31	1	1
SCN4A	Del_Xq21.1	1	1
SETD2	SMOC1	1	1
SETD2	SRPX	1	1
SETD2	TCF12	1	1
SETD2	TMEM216	1	1
SETD2	ZNF709	1	1
SETD2	10p-Amp	1	1
SETD2	11q-Amp	1	1
SETD2	19p-Amp	1	1
SETD2	8q-Amp	1	1
SETD2	12q-Del	1	1
SETD2	15q-Del	1	1
SETD2	22q-Del	1	1
SETD2	4p-Del	1	1
SETD2	4q-Del	1	1
SETD2	6q-Del	1	1
SETD2	9p-Del	1	1
SETD2	9q-Del	1	1
SETD2	Xp-Del	1	1
SETD2	Xq-Del	1	1
SETD2	Amp_1q22	1	1
SETD2	Amp_2p24.3	1	1
SETD2	Amp_8q24.13	1	1
SETD2	Amp_11q24.1	1	1
SETD2	Amp_13q34	1	1
SETD2	Amp_17q25.1	1	1
SETD2	Amp_19p13.2	1	1
SETD2	Del_1q43	1	1
SETD2	Del_3p21.31	1	1
SETD2	Del_3q13.31	1	1
SETD2	Del_3q29	1	1
SETD2	Del_5p15.33	1	1
SETD2	Del_6p25.3	1	1
SETD2	Del_6q22.31	1	1
SETD2	Del_7p22.3	1	1
SETD2	Del_8q24.3	1	1
SETD2	Del_9p23	1	1
SETD2	Del_22q13.31	1	1
SLC6A3	SMOC1	1	1
SLC6A3	SRPX	1	1
SLC6A3	TMEM216	1	1
SLC6A3	ZNF709	1	1
SLC6A3	11q-Amp	1	1
SLC6A3	19p-Amp	1	1
SLC6A3	8q-Amp	1	1
SLC6A3	10p-Del	1	1
SLC6A3	10q-Del	1	1
SLC6A3	11p-Del	1	1
SLC6A3	12q-Del	1	1
SLC6A3	14q-Del	1	1
SLC6A3	15q-Del	1	1
SLC6A3	18p-Del	1	1
SLC6A3	18q-Del	1	1
SLC6A3	22q-Del	1	1
SLC6A3	4p-Del	1	1
SLC6A3	4q-Del	1	1
SLC6A3	6q-Del	1	1
SLC6A3	9p-Del	1	1
SLC6A3	9q-Del	1	1
SLC6A3	Xp-Del	1	1
SLC6A3	Xq-Del	1	1
SLC6A3	Amp_1q22	1	1
SLC6A3	Amp_1q32.1	1	1
SLC6A3	Amp_2p24.3	1	1
SLC6A3	Amp_3q26.33	1	1
SLC6A3	Amp_8q24.13	1	1
SLC6A3	Amp_11q24.1	1	1
SLC6A3	Amp_12p13.32	1	1
SLC6A3	Amp_12q14.1	1	1
SLC6A3	Amp_13q34	1	1
SLC6A3	Amp_17q25.1	1	1
SLC6A3	Amp_19p13.3	1	1
SLC6A3	Amp_19p13.2	1	1
SLC6A3	Amp_Xp11.22	1	1
SLC6A3	Del_1q43	1	1
SLC6A3	Del_3q29	1	1
SLC6A3	Del_4q34.3	1	1
SLC6A3	Del_5p15.33	1	1
SLC6A3	Del_5q34	1	1
SLC6A3	Del_6p25.3	1	1
SLC6A3	Del_6q22.31	1	1
SLC6A3	Del_6q24.3	1	1
SLC6A3	Del_7p22.3	1	1
SLC6A3	Del_9p23	1	1
SLC6A3	Del_9p21.3	1	1
SLC6A3	Del_10q26.3	1	1
SLC6A3	Del_11p15.1	1	1
SLC6A3	Del_12q12	1	1
SLC6A3	Del_14q24.3	1	1
SLC6A3	Del_18q23	1	1
SLC6A3	Del_22q13.31	1	1
SLC6A3	Del_Xq21.1	1	1
SMARCA4	SRPX	1	1
SMARCA4	TMEM216	1	1
SMARCA4	ZNF709	1	1
SMARCA4	12q-Del	1	1
SMARCA4	15q-Del	1	1
SMARCA4	18p-Del	1	1
SMARCA4	22q-Del	1	1
SMARCA4	6q-Del	1	1
SMARCA4	9q-Del	1	1
SMARCA4	Xp-Del	1	1
SMARCA4	Xq-Del	1	1
SMARCA4	Amp_1q22	1	1
SMARCA4	Amp_1q32.1	1	1
SMARCA4	Amp_2p24.3	1	1
SMARCA4	Amp_3q26.33	1	1
SMARCA4	Amp_4q12	1	1
SMARCA4	Amp_13q34	1	1
SMARCA4	Del_5p15.33	1	1
SMARCA4	Del_8q24.3	1	1
SMARCA4	Del_12q12	1	1
SMOC1	SRPX	1	1
SMOC1	STK19	1	1
SMOC1	TCF12	1	1
SMOC1	TMEM216	1	1
SMOC1	TNRC18	1	1
SMOC1	TRERF1	1	1
SMOC1	ZBTB20	1	1
SMOC1	ZMIZ1	1	1
SMOC1	ZNF512B	1	1
SMOC1	ZNF709	1	1
SMOC1	10p-Amp	1	1
SMOC1	11q-Amp	1	1
SMOC1	19p-Amp	1	1
SMOC1	7p-Amp	1	1
SMOC1	8q-Amp	1	1
SMOC1	10p-Del	1	1
SMOC1	10q-Del	1	1
SMOC1	11p-Del	1	1
SMOC1	12q-Del	1	1
SMOC1	13q-Del	1	1
SMOC1	15q-Del	1	1
SMOC1	18p-Del	1	1
SMOC1	18q-Del	1	1
SMOC1	19q-Del	1	1
SMOC1	1p-Del	1	1
SMOC1	22q-Del	1	1
SMOC1	4q-Del	1	1
SMOC1	9p-Del	1	1
SMOC1	9q-Del	1	1
SMOC1	Xp-Del	1	1
SMOC1	Xq-Del	1	1
SMOC1	Amp_1q22	1	1
SMOC1	Amp_1q32.1	1	1
SMOC1	Amp_2p24.3	1	1
SMOC1	Amp_3q26.33	1	1
SMOC1	Amp_4q12	1	1
SMOC1	Amp_7p11.2	1	1
SMOC1	Amp_10p15.3	1	1
SMOC1	Amp_11q24.1	1	1
SMOC1	Amp_12p13.32	1	1
SMOC1	Amp_12q14.1	1	1
SMOC1	Amp_13q34	1	1
SMOC1	Amp_17q25.1	1	1
SMOC1	Amp_19p13.3	1	1
SMOC1	Amp_19p13.2	1	1
SMOC1	Del_1p36.32	1	1
SMOC1	Del_1p32.3	1	1
SMOC1	Del_1q43	1	1
SMOC1	Del_2q37.3	1	1
SMOC1	Del_3p21.31	1	1
SMOC1	Del_3q13.31	1	1
SMOC1	Del_3q29	1	1
SMOC1	Del_4q34.3	1	1
SMOC1	Del_5q34	1	1
SMOC1	Del_6p25.3	1	1
SMOC1	Del_7p22.3	1	1
SMOC1	Del_8q24.3	1	1
SMOC1	Del_10q26.3	1	1
SMOC1	Del_11p15.5	1	1
SMOC1	Del_11p15.1	1	1
SMOC1	Del_12q12	1	1
SMOC1	Del_18q23	1	1
SMOC1	Del_22q13.31	1	1
SMOC1	Del_Xq21.1	1	1
SRPX	STK19	1	1
SRPX	TCF12	1	1
SRPX	TMEM216	1	1
SRPX	TNRC18	1	1
SRPX	TP53	1	1
SRPX	TRERF1	1	1
SRPX	ZBTB20	1	1
SRPX	ZMIZ1	1	1
SRPX	ZNF512B	1	1
SRPX	ZNF709	1	1
SRPX	10p-Amp	1	1
SRPX	11q-Amp	1	1
SRPX	19p-Amp	1	1
SRPX	8q-Amp	1	1
SRPX	12q-Del	1	1
SRPX	13q-Del	1	1
SRPX	14q-Del	1	1
SRPX	15q-Del	1	1
SRPX	18p-Del	1	1
SRPX	18q-Del	1	1
SRPX	22q-Del	1	1
SRPX	4p-Del	1	1
SRPX	4q-Del	1	1
SRPX	6q-Del	1	1
SRPX	9q-Del	1	1
SRPX	Xp-Del	1	1
SRPX	Xq-Del	1	1
SRPX	Amp_2p24.3	1	1
SRPX	Amp_3q26.33	1	1
SRPX	Amp_4q12	1	1
SRPX	Amp_8q24.13	1	1
SRPX	Amp_10p15.3	1	1
SRPX	Amp_11q24.1	1	1
SRPX	Amp_12p13.32	1	1
SRPX	Amp_12q14.1	1	1
SRPX	Amp_13q34	1	1
SRPX	Amp_17q25.1	1	1
SRPX	Amp_19p13.3	1	1
SRPX	Amp_19p13.2	1	1
SRPX	Amp_Xp11.22	1	1
SRPX	Del_1q43	1	1
SRPX	Del_2q37.3	1	1
SRPX	Del_3p21.31	1	1
SRPX	Del_3q13.31	1	1
SRPX	Del_3q29	1	1
SRPX	Del_4q34.3	1	1
SRPX	Del_5p15.33	1	1
SRPX	Del_5q34	1	1
SRPX	Del_6p25.3	1	1
SRPX	Del_7p22.3	1	1
SRPX	Del_8q24.3	1	1
SRPX	Del_12q12	1	1
SRPX	Del_13q14.2	1	1
SRPX	Del_18q23	1	1
SRPX	Del_22q13.31	1	1
SRPX	Del_Xq21.1	1	1
STK19	TCF12	1	1
STK19	ZNF709	1	1
STK19	10p-Amp	1	1
STK19	11q-Amp	1	1
STK19	11p-Del	1	1
STK19	12q-Del	1	1
STK19	14q-Del	1	1
STK19	15q-Del	1	1
STK19	22q-Del	1	1
STK19	4p-Del	1	1
STK19	4q-Del	1	1
STK19	9q-Del	1	1
STK19	Xp-Del	1	1
STK19	Xq-Del	1	1
STK19	Amp_1q22	1	1
STK19	Amp_1q32.1	1	1
STK19	Amp_4q12	1	1
STK19	Amp_10p15.3	1	1
STK19	Amp_11q24.1	1	1
STK19	Amp_12p13.32	1	1
STK19	Amp_13q34	1	1
STK19	Amp_Xp11.22	1	1
STK19	Del_1q43	1	1
STK19	Del_2q37.3	1	1
STK19	Del_3q13.31	1	1
STK19	Del_3q29	1	1
STK19	Del_5p15.33	1	1
STK19	Del_5q34	1	1
STK19	Del_6p25.3	1	1
STK19	Del_8q24.3	1	1
STK19	Del_11p15.5	1	1
STK19	Del_11p15.1	1	1
STK19	Del_12q12	1	1
STK19	Del_22q13.31	1	1
STK19	Del_Xq21.1	1	1
TCF12	TMEM216	1	1
TCF12	ZBTB20	1	1
TCF12	ZMIZ1	1	1
TCF12	ZNF512B	1	1
TCF12	ZNF709	1	1
TCF12	19p-Amp	1	1
TCF12	8q-Amp	1	1
TCF12	12q-Del	1	1
TCF12	18p-Del	1	1
TCF12	18q-Del	1	1
TCF12	22q-Del	1	1
TCF12	Xq-Del	1	1
TCF12	Amp_1q22	1	1
TCF12	Amp_2p24.3	1	1
TCF12	Amp_3q26.33	1	1
TCF12	Amp_12p13.32	1	1
TCF12	Amp_12q14.1	1	1
TCF12	Amp_13q34	1	1
TCF12	Amp_17q25.1	1	1
TCF12	Amp_19p13.3	1	1
TCF12	Amp_Xp11.22	1	1
TCF12	Del_1q43	1	1
TCF12	Del_3p21.31	1	1
TCF12	Del_3q13.31	1	1
TCF12	Del_3q29	1	1
TCF12	Del_5p15.33	1	1
TCF12	Del_5q34	1	1
TCF12	Del_7p22.3	1	1
TCF12	Del_8q24.3	1	1
TCF12	Del_12q12	1	1
TCF12	Del_Xq21.1	1	1
TMEM216	TNRC18	1	1
TMEM216	TRERF1	1	1
TMEM216	ZBTB20	1	1
TMEM216	ZMIZ1	1	1
TMEM216	ZNF512B	1	1
TMEM216	ZNF709	1	1
TMEM216	10p-Amp	1	1
TMEM216	11q-Amp	1	1
TMEM216	19p-Amp	1	1
TMEM216	8q-Amp	1	1
TMEM216	10p-Del	1	1
TMEM216	10q-Del	1	1
TMEM216	11p-Del	1	1
TMEM216	14q-Del	1	1
TMEM216	15q-Del	1	1
TMEM216	18p-Del	1	1
TMEM216	18q-Del	1	1
TMEM216	22q-Del	1	1
TMEM216	6q-Del	1	1
TMEM216	9q-Del	1	1
TMEM216	Xp-Del	1	1
TMEM216	Xq-Del	1	1
TMEM216	Amp_1q22	1	1
TMEM216	Amp_1q32.1	1	1
TMEM216	Amp_2p24.3	1	1
TMEM216	Amp_3q26.33	1	1
TMEM216	Amp_4q12	1	1
TMEM216	Amp_10p15.3	1	1
TMEM216	Amp_11q24.1	1	1
TMEM216	Amp_12p13.32	1	1
TMEM216	Amp_12q14.1	1	1
TMEM216	Amp_13q34	1	1
TMEM216	Amp_19p13.3	1	1
TMEM216	Amp_19p13.2	1	1
TMEM216	Amp_Xp11.22	1	1
TMEM216	Del_1q43	1	1
TMEM216	Del_2q37.3	1	1
TMEM216	Del_3p21.31	1	1
TMEM216	Del_3q13.31	1	1
TMEM216	Del_3q29	1	1
TMEM216	Del_5p15.33	1	1
TMEM216	Del_5q34	1	1
TMEM216	Del_6p25.3	1	1
TMEM216	Del_6q24.3	1	1
TMEM216	Del_7p22.3	1	1
TMEM216	Del_8q24.3	1	1
TMEM216	Del_9p23	1	1
TMEM216	Del_10q26.3	1	1
TMEM216	Del_11p15.5	1	1
TMEM216	Del_11p15.1	1	1
TMEM216	Del_14q24.3	1	1
TMEM216	Del_18q23	1	1
TMEM216	Del_22q13.31	1	1
TMEM216	Del_Xq21.1	1	1
TNRC18	ZNF709	1	1
TNRC18	10p-Amp	1	1
TNRC18	11q-Amp	1	1
TNRC18	19p-Amp	1	1
TNRC18	8q-Amp	1	1
TNRC18	11p-Del	1	1
TNRC18	12q-Del	1	1
TNRC18	13q-Del	1	1
TNRC18	15q-Del	1	1
TNRC18	18p-Del	1	1
TNRC18	18q-Del	1	1
TNRC18	22q-Del	1	1
TNRC18	6q-Del	1	1
TNRC18	9q-Del	1	1
TNRC18	Xp-Del	1	1
TNRC18	Xq-Del	1	1
TNRC18	Amp_1q22	1	1
TNRC18	Amp_2p24.3	1	1
TNRC18	Amp_3q26.33	1	1
TNRC18	Amp_4q12	1	1
TNRC18	Amp_10p15.3	1	1
TNRC18	Amp_12q14.1	1	1
TNRC18	Amp_13q34	1	1
TNRC18	Amp_17q25.1	1	1
TNRC18	Amp_Xp11.22	1	1
TNRC18	Del_1q43	1	1
TNRC18	Del_2q37.3	1	1
TNRC18	Del_3p21.31	1	1
TNRC18	Del_3q13.31	1	1
TNRC18	Del_3q29	1	1
TNRC18	Del_6p25.3	1	1
TNRC18	Del_7p22.3	1	1
TNRC18	Del_8q24.3	1	1
TNRC18	Del_11p15.5	1	1
TNRC18	Del_11p15.1	1	1
TNRC18	Del_12q12	1	1
TNRC18	Del_13q14.2	1	1
TNRC18	Del_18q23	1	1
TNRC18	Del_22q13.31	1	1
TNRC18	Del_Xq21.1	1	1
TP53	19p-Amp	1	1
TP53	10p-Del	1	1
TP53	10q-Del	1	1
TP53	19q-Del	1	1
TP53	1p-Del	1	1
TP53	Amp_19p13.2	1	1
TP53	Del_1p36.32	1	1
TP53	Del_1p32.3	1	1
TP53	Del_19q13.41	1	1
TP53	Del_19q13.42	1	1
TRERF1	ZNF709	1	1
TRERF1	10p-Amp	1	1
TRERF1	11q-Amp	1	1
TRERF1	19p-Amp	1	1
TRERF1	8q-Amp	1	1
TRERF1	10p-Del	1	1
TRERF1	10q-Del	1	1
TRERF1	11p-Del	1	1
TRERF1	12q-Del	1	1
TRERF1	13q-Del	1	1
TRERF1	15q-Del	1	1
TRERF1	18p-Del	1	1
TRERF1	18q-Del	1	1
TRERF1	19q-Del	1	1
TRERF1	1p-Del	1	1
TRERF1	22q-Del	1	1
TRERF1	4p-Del	1	1
TRERF1	4q-Del	1	1
TRERF1	6q-Del	1	1
TRERF1	Xq-Del	1	1
TRERF1	Amp_1q22	1	1
TRERF1	Amp_1q32.1	1	1
TRERF1	Amp_2p24.3	1	1
TRERF1	Amp_3q26.33	1	1
TRERF1	Amp_4q12	1	1
TRERF1	Amp_10p15.3	1	1
TRERF1	Amp_11q24.1	1	1
TRERF1	Amp_12p13.32	1	1
TRERF1	Amp_12q14.1	1	1
TRERF1	Amp_13q34	1	1
TRERF1	Amp_17q25.1	1	1
TRERF1	Amp_19p13.3	1	1
TRERF1	Amp_Xp11.22	1	1
TRERF1	Del_1p36.32	1	1
TRERF1	Del_1p32.3	1	1
TRERF1	Del_1q43	1	1
TRERF1	Del_3p21.31	1	1
TRERF1	Del_3q13.31	1	1
TRERF1	Del_3q29	1	1
TRERF1	Del_4q34.3	1	1
TRERF1	Del_5p15.33	1	1
TRERF1	Del_5q34	1	1
TRERF1	Del_6p25.3	1	1
TRERF1	Del_6q22.31	1	1
TRERF1	Del_6q24.3	1	1
TRERF1	Del_7p22.3	1	1
TRERF1	Del_8q24.3	1	1
TRERF1	Del_9p21.3	1	1
TRERF1	Del_10q26.3	1	1
TRERF1	Del_11p15.5	1	1
TRERF1	Del_11p15.1	1	1
TRERF1	Del_12q12	1	1
TRERF1	Del_19q13.41	1	1
TRERF1	Del_19q13.42	1	1
TRERF1	Del_22q13.31	1	1
TRERF1	Del_Xq21.1	1	1
ZBTB20	10p-Amp	1	1
ZBTB20	11q-Amp	1	1
ZBTB20	19p-Amp	1	1
ZBTB20	10p-Del	1	1
ZBTB20	10q-Del	1	1
ZBTB20	12q-Del	1	1
ZBTB20	13q-Del	1	1
ZBTB20	22q-Del	1	1
ZBTB20	9p-Del	1	1
ZBTB20	9q-Del	1	1
ZBTB20	Xq-Del	1	1
ZBTB20	Amp_1q22	1	1
ZBTB20	Amp_1q32.1	1	1
ZBTB20	Amp_2p24.3	1	1
ZBTB20	Amp_3q26.33	1	1
ZBTB20	Amp_4q12	1	1
ZBTB20	Amp_10p15.3	1	1
ZBTB20	Amp_13q34	1	1
ZBTB20	Amp_17q25.1	1	1
ZBTB20	Amp_19p13.2	1	1
ZBTB20	Amp_Xp11.22	1	1
ZBTB20	Del_1q43	1	1
ZBTB20	Del_2q37.3	1	1
ZBTB20	Del_3p21.31	1	1
ZBTB20	Del_3q13.31	1	1
ZBTB20	Del_5p15.33	1	1
ZBTB20	Del_5q34	1	1
ZBTB20	Del_7p22.3	1	1
ZBTB20	Del_9p21.3	1	1
ZBTB20	Del_10q26.3	1	1
ZBTB20	Del_12q12	1	1
ZBTB20	Del_13q14.2	1	1
ZBTB20	Del_22q13.31	1	1
ZMIZ1	ZNF709	1	1
ZMIZ1	10p-Amp	1	1
ZMIZ1	11q-Amp	1	1
ZMIZ1	19p-Amp	1	1
ZMIZ1	10p-Del	1	1
ZMIZ1	10q-Del	1	1
ZMIZ1	11p-Del	1	1
ZMIZ1	12q-Del	1	1
ZMIZ1	22q-Del	1	1
ZMIZ1	4p-Del	1	1
ZMIZ1	4q-Del	1	1
ZMIZ1	9p-Del	1	1
ZMIZ1	9q-Del	1	1
ZMIZ1	Xq-Del	1	1
ZMIZ1	Amp_1q22	1	1
ZMIZ1	Amp_1q32.1	1	1
ZMIZ1	Amp_2p24.3	1	1
ZMIZ1	Amp_3q26.33	1	1
ZMIZ1	Amp_4q12	1	1
ZMIZ1	Amp_10p15.3	1	1
ZMIZ1	Amp_11q24.1	1	1
ZMIZ1	Amp_12p13.32	1	1
ZMIZ1	Amp_12q14.1	1	1
ZMIZ1	Amp_13q34	1	1
ZMIZ1	Amp_17q25.1	1	1
ZMIZ1	Amp_19p13.3	1	1
ZMIZ1	Amp_Xp11.22	1	1
ZMIZ1	Del_1q43	1	1
ZMIZ1	Del_3p21.31	1	1
ZMIZ1	Del_3q13.31	1	1
ZMIZ1	Del_3q29	1	1
ZMIZ1	Del_4q34.3	1	1
ZMIZ1	Del_5q34	1	1
ZMIZ1	Del_7p22.3	1	1
ZMIZ1	Del_9p23	1	1
ZMIZ1	Del_9p21.3	1	1
ZMIZ1	Del_10q26.3	1	1
ZMIZ1	Del_12q12	1	1
ZMIZ1	Del_22q13.31	1	1
ZMIZ1	Del_Xq21.1	1	1
ZNF512B	ZNF709	1	1
ZNF512B	10p-Amp	1	1
ZNF512B	11q-Amp	1	1
ZNF512B	19p-Amp	1	1
ZNF512B	8q-Amp	1	1
ZNF512B	10p-Del	1	1
ZNF512B	10q-Del	1	1
ZNF512B	11p-Del	1	1
ZNF512B	12q-Del	1	1
ZNF512B	14q-Del	1	1
ZNF512B	15q-Del	1	1
ZNF512B	18p-Del	1	1
ZNF512B	18q-Del	1	1
ZNF512B	22q-Del	1	1
ZNF512B	4p-Del	1	1
ZNF512B	4q-Del	1	1
ZNF512B	6q-Del	1	1
ZNF512B	9p-Del	1	1
ZNF512B	9q-Del	1	1
ZNF512B	Xp-Del	1	1
ZNF512B	Xq-Del	1	1
ZNF512B	Amp_1q22	1	1
ZNF512B	Amp_1q32.1	1	1
ZNF512B	Amp_3q26.33	1	1
ZNF512B	Amp_4q12	1	1
ZNF512B	Amp_8q24.13	1	1
ZNF512B	Amp_10p15.3	1	1
ZNF512B	Amp_11q24.1	1	1
ZNF512B	Amp_12q14.1	1	1
ZNF512B	Amp_13q34	1	1
ZNF512B	Amp_19p13.3	1	1
ZNF512B	Amp_19p13.2	1	1
ZNF512B	Amp_Xp11.22	1	1
ZNF512B	Del_1q43	1	1
ZNF512B	Del_3p21.31	1	1
ZNF512B	Del_3q13.31	1	1
ZNF512B	Del_5p15.33	1	1
ZNF512B	Del_5q34	1	1
ZNF512B	Del_6p25.3	1	1
ZNF512B	Del_7p22.3	1	1
ZNF512B	Del_8q24.3	1	1
ZNF512B	Del_10q26.3	1	1
ZNF512B	Del_11p15.5	1	1
ZNF512B	Del_11p15.1	1	1
ZNF512B	Del_12q12	1	1
ZNF512B	Del_14q24.3	1	1
ZNF512B	Del_18q23	1	1
ZNF512B	Del_22q13.31	1	1
ZNF512B	Del_Xq21.1	1	1
ZNF709	11q-Amp	1	1
ZNF709	19p-Amp	1	1
ZNF709	7p-Amp	1	1
ZNF709	7q-Amp	1	1
ZNF709	8q-Amp	1	1
ZNF709	10p-Del	1	1
ZNF709	10q-Del	1	1
ZNF709	12q-Del	1	1
ZNF709	13q-Del	1	1
ZNF709	14q-Del	1	1
ZNF709	15q-Del	1	1
ZNF709	18p-Del	1	1
ZNF709	18q-Del	1	1
ZNF709	22q-Del	1	1
ZNF709	4p-Del	1	1
ZNF709	4q-Del	1	1
ZNF709	6q-Del	1	1
ZNF709	9p-Del	1	1
ZNF709	9q-Del	1	1
ZNF709	Xp-Del	1	1
ZNF709	Xq-Del	1	1
ZNF709	Amp_1q22	1	1
ZNF709	Amp_1q32.1	1	1
ZNF709	Amp_2p24.3	1	1
ZNF709	Amp_3q26.33	1	1
ZNF709	Amp_4q12	1	1
ZNF709	Amp_7p11.2	1	1
ZNF709	Amp_7q31.2	1	1
ZNF709	Amp_7q32.3	1	1
ZNF709	Amp_8q24.13	1	1
ZNF709	Amp_11q24.1	1	1
ZNF709	Amp_12p13.32	1	1
ZNF709	Amp_13q34	1	1
ZNF709	Amp_19p13.3	1	1
ZNF709	Amp_19p13.2	1	1
ZNF709	Amp_Xp11.22	1	1
ZNF709	Del_1q43	1	1
ZNF709	Del_3p21.31	1	1
ZNF709	Del_3q13.31	1	1
ZNF709	Del_3q29	1	1
ZNF709	Del_5p15.33	1	1
ZNF709	Del_6q22.31	1	1
ZNF709	Del_6q24.3	1	1
ZNF709	Del_7p22.3	1	1
ZNF709	Del_8q24.3	1	1
ZNF709	Del_12q12	1	1
ZNF709	Del_13q14.2	1	1
ZNF709	Del_14q24.3	1	1
ZNF709	Del_18q23	1	1
ZNF709	Del_22q13.31	1	1
ZNF709	Del_Xq21.1	1	1
10p-Amp	19p-Amp	1	1
10p-Amp	10p-Del	1	1
10p-Amp	15q-Del	1	1
10p-Amp	18q-Del	1	1
10p-Amp	19q-Del	1	1
10p-Amp	1p-Del	1	1
10p-Amp	6q-Del	1	1
10p-Amp	Xp-Del	1	1
10p-Amp	Xq-Del	1	1
10p-Amp	Amp_1q22	1	1
10p-Amp	Amp_1q32.1	1	1
10p-Amp	Amp_2p24.3	1	1
10p-Amp	Amp_3q26.33	1	1
10p-Amp	Amp_19p13.2	1	1
10p-Amp	Del_1p36.32	1	1
10p-Amp	Del_1p32.3	1	1
10p-Amp	Del_1q43	1	1
11q-Amp	19p-Amp	1	1
11q-Amp	10p-Del	1	1
11q-Amp	10q-Del	1	1
11q-Amp	11p-Del	1	1
11q-Amp	12q-Del	1	1
11q-Amp	13q-Del	1	1
11q-Amp	22q-Del	1	1
11q-Amp	6q-Del	1	1
11q-Amp	9q-Del	1	1
11q-Amp	Xp-Del	1	1
11q-Amp	Xq-Del	1	1
11q-Amp	Amp_1q22	1	1
11q-Amp	Amp_1q32.1	1	1
11q-Amp	Amp_2p24.3	1	1
11q-Amp	Amp_3q26.33	1	1
11q-Amp	Amp_4q12	1	1
11q-Amp	Amp_12p13.32	1	1
11q-Amp	Amp_12q14.1	1	1
11q-Amp	Amp_19p13.2	1	1
11q-Amp	Del_1q43	1	1
11q-Amp	Del_3p21.31	1	1
11q-Amp	Del_5p15.33	1	1
11q-Amp	Del_6q22.31	1	1
11q-Amp	Del_6q24.3	1	1
11q-Amp	Del_8q24.3	1	1
11q-Amp	Del_10q26.3	1	1
11q-Amp	Del_12q12	1	1
11q-Amp	Del_22q13.31	1	1
11q-Amp	Del_Xq21.1	1	1
19p-Amp	8q-Amp	1	1
19p-Amp	11p-Del	1	1
19p-Amp	12q-Del	1	1
19p-Amp	13q-Del	1	1
19p-Amp	14q-Del	1	1
19p-Amp	18p-Del	1	1
19p-Amp	18q-Del	1	1
19p-Amp	4p-Del	1	1
19p-Amp	4q-Del	1	1
19p-Amp	6q-Del	1	1
19p-Amp	Xp-Del	1	1
19p-Amp	Xq-Del	1	1
19p-Amp	Amp_2p24.3	1	1
19p-Amp	Amp_4q12	1	1
19p-Amp	Amp_8q24.13	1	1
19p-Amp	Amp_10p15.3	1	1
19p-Amp	Amp_12p13.32	1	1
19p-Amp	Amp_17q25.1	1	1
19p-Amp	Amp_Xp11.22	1	1
19p-Amp	Del_2q37.3	1	1
19p-Amp	Del_3q13.31	1	1
19p-Amp	Del_5q34	1	1
19p-Amp	Del_6p25.3	1	1
19p-Amp	Del_6q22.31	1	1
19p-Amp	Del_6q24.3	1	1
19p-Amp	Del_7p22.3	1	1
19p-Amp	Del_8q24.3	1	1
19p-Amp	Del_11p15.5	1	1
19p-Amp	Del_11p15.1	1	1
19p-Amp	Del_12q12	1	1
19p-Amp	Del_13q14.2	1	1
19p-Amp	Del_14q24.3	1	1
19p-Amp	Del_18q23	1	1
19p-Amp	Del_Xq21.1	1	1
7p-Amp	12q-Del	1	1
7p-Amp	19q-Del	1	1
7p-Amp	1p-Del	1	1
7p-Amp	Xp-Del	1	1
7p-Amp	Xq-Del	1	1
7p-Amp	Amp_Xp11.22	1	1
7p-Amp	Del_3q13.31	1	1
7p-Amp	Del_19q13.41	1	1
7p-Amp	Del_19q13.42	1	1
7p-Amp	Del_Xq21.1	1	1
7q-Amp	12q-Del	1	1
7q-Amp	Xp-Del	1	1
7q-Amp	Xq-Del	1	1
7q-Amp	Del_1q43	1	1
7q-Amp	Del_3q13.31	1	1
7q-Amp	Del_5q34	1	1
7q-Amp	Del_Xq21.1	1	1
8q-Amp	14q-Del	1	1
8q-Amp	15q-Del	1	1
8q-Amp	18p-Del	1	1
8q-Amp	18q-Del	1	1
8q-Amp	6q-Del	1	1
8q-Amp	9q-Del	1	1
8q-Amp	Xp-Del	1	1
8q-Amp	Xq-Del	1	1
8q-Amp	Amp_1q32.1	1	1
8q-Amp	Amp_19p13.3	1	1
8q-Amp	Amp_19p13.2	1	1
8q-Amp	Del_1p32.3	1	1
8q-Amp	Del_1q43	1	1
8q-Amp	Del_6q22.31	1	1
8q-Amp	Del_6q24.3	1	1
10p-Del	12q-Del	1	1
10p-Del	19q-Del	1	1
10p-Del	1p-Del	1	1
10p-Del	4p-Del	1	1
10p-Del	4q-Del	1	1
10p-Del	Amp_2p24.3	1	1
10p-Del	Amp_12p13.32	1	1
10p-Del	Amp_Xp11.22	1	1
10p-Del	Del_1p36.32	1	1
10p-Del	Del_1q43	1	1
10p-Del	Del_7p22.3	1	1
10p-Del	Del_19q13.41	1	1
10p-Del	Del_19q13.42	1	1
10p-Del	Del_Xq21.1	1	1
10q-Del	12q-Del	1	1
10q-Del	19q-Del	1	1
10q-Del	1p-Del	1	1
10q-Del	4p-Del	1	1
10q-Del	4q-Del	1	1
10q-Del	Amp_2p24.3	1	1
10q-Del	Amp_12p13.32	1	1
10q-Del	Amp_Xp11.22	1	1
10q-Del	Del_1p36.32	1	1
10q-Del	Del_7p22.3	1	1
10q-Del	Del_19q13.41	1	1
10q-Del	Del_19q13.42	1	1
10q-Del	Del_Xq21.1	1	1
11p-Del	15q-Del	1	1
11p-Del	18q-Del	1	1
11p-Del	19q-Del	1	1
11p-Del	1p-Del	1	1
11p-Del	Amp_11q24.1	1	1
11p-Del	Del_1p36.32	1	1
11p-Del	Del_1p32.3	1	1
12q-Del	18p-Del	1	1
12q-Del	18q-Del	1	1
12q-Del	19q-Del	1	1
12q-Del	1p-Del	1	1
12q-Del	9q-Del	1	1
12q-Del	Xp-Del	1	1
12q-Del	Xq-Del	1	1
12q-Del	Amp_1q22	1	1
12q-Del	Amp_2p24.3	1	1
12q-Del	Amp_7p11.2	1	1
12q-Del	Amp_7q31.2	1	1
12q-Del	Amp_7q32.3	1	1
12q-Del	Amp_11q24.1	1	1
12q-Del	Amp_17q25.1	1	1
12q-Del	Amp_19p13.2	1	1
12q-Del	Del_1p36.32	1	1
12q-Del	Del_1p32.3	1	1
12q-Del	Del_1q43	1	1
12q-Del	Del_7p22.3	1	1
12q-Del	Del_8q24.3	1	1
12q-Del	Del_18q23	1	1
12q-Del	Del_Xq21.1	1	1
13q-Del	Amp_19p13.2	1	1
13q-Del	Amp_Xp11.22	1	1
13q-Del	Del_1q43	1	1
14q-Del	Amp_2p24.3	1	1
14q-Del	Amp_10p15.3	1	1
14q-Del	Amp_19p13.3	1	1
14q-Del	Del_3q13.31	1	1
14q-Del	Del_7p22.3	1	1
14q-Del	Del_Xq21.1	1	1
15q-Del	Xp-Del	1	1
15q-Del	Xq-Del	1	1
15q-Del	Amp_1q22	1	1
15q-Del	Amp_2p24.3	1	1
15q-Del	Amp_4q12	1	1
15q-Del	Amp_8q24.13	1	1
15q-Del	Amp_10p15.3	1	1
15q-Del	Amp_12p13.32	1	1
15q-Del	Amp_12q14.1	1	1
15q-Del	Amp_17q25.1	1	1
15q-Del	Amp_Xp11.22	1	1
15q-Del	Del_1q43	1	1
15q-Del	Del_3q13.31	1	1
15q-Del	Del_3q29	1	1
15q-Del	Del_7p22.3	1	1
15q-Del	Del_8q24.3	1	1
15q-Del	Del_Xq21.1	1	1
18p-Del	Amp_1q22	1	1
18p-Del	Amp_1q32.1	1	1
18p-Del	Amp_2p24.3	1	1
18p-Del	Amp_3q26.33	1	1
18p-Del	Amp_17q25.1	1	1
18p-Del	Amp_Xp11.22	1	1
18p-Del	Del_1q43	1	1
18p-Del	Del_3q13.31	1	1
18p-Del	Del_3q29	1	1
18p-Del	Del_5q34	1	1
18p-Del	Del_7p22.3	1	1
18p-Del	Del_12q12	1	1
18p-Del	Del_Xq21.1	1	1
18q-Del	Xq-Del	1	1
18q-Del	Amp_1q22	1	1
18q-Del	Amp_1q32.1	1	1
18q-Del	Amp_2p24.3	1	1
18q-Del	Amp_3q26.33	1	1
18q-Del	Amp_4q12	1	1
18q-Del	Amp_8q24.13	1	1
18q-Del	Amp_10p15.3	1	1
18q-Del	Amp_12p13.32	1	1
18q-Del	Amp_17q25.1	1	1
18q-Del	Amp_Xp11.22	1	1
18q-Del	Del_1q43	1	1
18q-Del	Del_3q29	1	1
18q-Del	Del_5p15.33	1	1
18q-Del	Del_5q34	1	1
18q-Del	Del_7p22.3	1	1
18q-Del	Del_11p15.5	1	1
18q-Del	Del_12q12	1	1
18q-Del	Del_Xq21.1	1	1
19q-Del	22q-Del	1	1
19q-Del	6q-Del	1	1
19q-Del	Amp_2p24.3	1	1
19q-Del	Amp_4q12	1	1
19q-Del	Amp_7p11.2	1	1
19q-Del	Amp_8q24.13	1	1
19q-Del	Amp_10p15.3	1	1
19q-Del	Amp_12p13.32	1	1
19q-Del	Amp_12q14.1	1	1
19q-Del	Amp_13q34	1	1
19q-Del	Del_2q37.3	1	1
19q-Del	Del_3q29	1	1
19q-Del	Del_5p15.33	1	1
19q-Del	Del_6q22.31	1	1
19q-Del	Del_6q24.3	1	1
19q-Del	Del_9p23	1	1
19q-Del	Del_9p21.3	1	1
19q-Del	Del_10q26.3	1	1
19q-Del	Del_11p15.5	1	1
19q-Del	Del_11p15.1	1	1
19q-Del	Del_22q13.31	1	1
1p-Del	22q-Del	1	1
1p-Del	6q-Del	1	1
1p-Del	9p-Del	1	1
1p-Del	Xp-Del	1	1
1p-Del	Xq-Del	1	1
1p-Del	Amp_2p24.3	1	1
1p-Del	Amp_3q26.33	1	1
1p-Del	Amp_7p11.2	1	1
1p-Del	Amp_8q24.13	1	1
1p-Del	Amp_10p15.3	1	1
1p-Del	Amp_12p13.32	1	1
1p-Del	Amp_12q14.1	1	1
1p-Del	Amp_13q34	1	1
1p-Del	Amp_Xp11.22	1	1
1p-Del	Del_2q37.3	1	1
1p-Del	Del_3q13.31	1	1
1p-Del	Del_3q29	1	1
1p-Del	Del_5p15.33	1	1
1p-Del	Del_5q34	1	1
1p-Del	Del_6q22.31	1	1
1p-Del	Del_6q24.3	1	1
1p-Del	Del_8q24.3	1	1
1p-Del	Del_9p23	1	1
1p-Del	Del_9p21.3	1	1
1p-Del	Del_10q26.3	1	1
1p-Del	Del_11p15.5	1	1
1p-Del	Del_11p15.1	1	1
1p-Del	Del_22q13.31	1	1
1p-Del	Del_Xq21.1	1	1
22q-Del	Amp_1q22	1	1
22q-Del	Amp_1q32.1	1	1
22q-Del	Amp_2p24.3	1	1
22q-Del	Amp_11q24.1	1	1
22q-Del	Amp_17q25.1	1	1
22q-Del	Del_1q43	1	1
22q-Del	Del_19q13.41	1	1
22q-Del	Del_19q13.42	1	1
4p-Del	Xp-Del	1	1
4p-Del	Xq-Del	1	1
4p-Del	Amp_1q22	1	1
4p-Del	Amp_1q32.1	1	1
4p-Del	Amp_2p24.3	1	1
4p-Del	Amp_3q26.33	1	1
4p-Del	Amp_12q14.1	1	1
4p-Del	Amp_13q34	1	1
4p-Del	Amp_19p13.2	1	1
4p-Del	Del_1q43	1	1
4p-Del	Del_6p25.3	1	1
4p-Del	Del_8q24.3	1	1
4q-Del	6q-Del	1	1
4q-Del	Xp-Del	1	1
4q-Del	Xq-Del	1	1
4q-Del	Amp_1q32.1	1	1
4q-Del	Amp_2p24.3	1	1
4q-Del	Amp_3q26.33	1	1
4q-Del	Amp_13q34	1	1
4q-Del	Amp_19p13.2	1	1
4q-Del	Amp_Xp11.22	1	1
4q-Del	Del_1q43	1	1
6q-Del	Amp_4q12	1	1
6q-Del	Amp_10p15.3	1	1
6q-Del	Amp_12p13.32	1	1
6q-Del	Amp_12q14.1	1	1
6q-Del	Amp_19p13.2	1	1
6q-Del	Del_1p36.32	1	1
6q-Del	Del_1p32.3	1	1
9p-Del	Del_1p32.3	1	1
9q-Del	Amp_2p24.3	1	1
9q-Del	Amp_3q26.33	1	1
9q-Del	Amp_11q24.1	1	1
9q-Del	Amp_12p13.32	1	1
9q-Del	Amp_13q34	1	1
9q-Del	Amp_Xp11.22	1	1
9q-Del	Del_5p15.33	1	1
9q-Del	Del_12q12	1	1
Xp-Del	Amp_1q22	1	1
Xp-Del	Amp_2p24.3	1	1
Xp-Del	Amp_3q26.33	1	1
Xp-Del	Amp_4q12	1	1
Xp-Del	Amp_7q31.2	1	1
Xp-Del	Amp_7q32.3	1	1
Xp-Del	Amp_13q34	1	1
Xp-Del	Amp_17q25.1	1	1
Xp-Del	Amp_19p13.3	1	1
Xp-Del	Amp_19p13.2	1	1
Xp-Del	Amp_Xp11.22	1	1
Xp-Del	Del_1p36.32	1	1
Xp-Del	Del_1p32.3	1	1
Xp-Del	Del_5q34	1	1
Xp-Del	Del_12q12	1	1
Xq-Del	Amp_1q22	1	1
Xq-Del	Amp_2p24.3	1	1
Xq-Del	Amp_3q26.33	1	1
Xq-Del	Amp_4q12	1	1
Xq-Del	Amp_7q31.2	1	1
Xq-Del	Amp_7q32.3	1	1
Xq-Del	Amp_12p13.32	1	1
Xq-Del	Amp_13q34	1	1
Xq-Del	Amp_17q25.1	1	1
Xq-Del	Amp_19p13.3	1	1
Xq-Del	Amp_19p13.2	1	1
Xq-Del	Amp_Xp11.22	1	1
Xq-Del	Del_1p36.32	1	1
Xq-Del	Del_1p32.3	1	1
Xq-Del	Del_5q34	1	1
Xq-Del	Del_12q12	1	1
Xq-Del	Del_18q23	1	1
Amp_1q22	Amp_4q12	1	1
Amp_1q22	Amp_10p15.3	1	1
Amp_1q22	Amp_13q34	1	1
Amp_1q22	Amp_17q25.1	1	1
Amp_1q22	Amp_Xp11.22	1	1
Amp_1q22	Del_3p21.31	1	1
Amp_1q22	Del_3q13.31	1	1
Amp_1q22	Del_5p15.33	1	1
Amp_1q22	Del_5q34	1	1
Amp_1q22	Del_7p22.3	1	1
Amp_1q22	Del_12q12	1	1
Amp_1q22	Del_22q13.31	1	1
Amp_1q22	Del_Xq21.1	1	1
Amp_1q32.1	Amp_2p24.3	1	1
Amp_1q32.1	Amp_8q24.13	1	1
Amp_1q32.1	Amp_10p15.3	1	1
Amp_1q32.1	Amp_11q24.1	1	1
Amp_1q32.1	Amp_17q25.1	1	1
Amp_1q32.1	Amp_Xp11.22	1	1
Amp_1q32.1	Del_2q37.3	1	1
Amp_1q32.1	Del_3p21.31	1	1
Amp_1q32.1	Del_3q13.31	1	1
Amp_1q32.1	Del_3q29	1	1
Amp_1q32.1	Del_7p22.3	1	1
Amp_1q32.1	Del_18q23	1	1
Amp_1q32.1	Del_19q13.42	1	1
Amp_1q32.1	Del_22q13.31	1	1
Amp_1q32.1	Del_Xq21.1	1	1
Amp_2p24.3	Amp_3q26.33	1	1
Amp_2p24.3	Amp_4q12	1	1
Amp_2p24.3	Amp_10p15.3	1	1
Amp_2p24.3	Amp_12q14.1	1	1
Amp_2p24.3	Amp_13q34	1	1
Amp_2p24.3	Amp_19p13.3	1	1
Amp_2p24.3	Amp_19p13.2	1	1
Amp_2p24.3	Amp_Xp11.22	1	1
Amp_2p24.3	Del_1p36.32	1	1
Amp_2p24.3	Del_1p32.3	1	1
Amp_2p24.3	Del_1q43	1	1
Amp_2p24.3	Del_3p21.31	1	1
Amp_2p24.3	Del_3q13.31	1	1
Amp_2p24.3	Del_5q34	1	1
Amp_2p24.3	Del_8q24.3	1	1
Amp_2p24.3	Del_22q13.31	1	1
Amp_2p24.3	Del_Xq21.1	1	1
Amp_3q26.33	Amp_Xp11.22	1	1
Amp_3q26.33	Del_1q43	1	1
Amp_3q26.33	Del_3q13.31	1	1
Amp_3q26.33	Del_7p22.3	1	1
Amp_3q26.33	Del_18q23	1	1
Amp_4q12	Amp_11q24.1	1	1
Amp_4q12	Amp_19p13.3	1	1
Amp_4q12	Del_1q43	1	1
Amp_4q12	Del_7p22.3	1	1
Amp_4q12	Del_19q13.41	1	1
Amp_4q12	Del_19q13.42	1	1
Amp_7p11.2	Amp_Xp11.22	1	1
Amp_7p11.2	Del_1p36.32	1	1
Amp_7p11.2	Del_3q13.31	1	1
Amp_7p11.2	Del_19q13.41	1	1
Amp_7p11.2	Del_19q13.42	1	1
Amp_7p11.2	Del_Xq21.1	1	1
Amp_8q24.13	Amp_19p13.2	1	1
Amp_8q24.13	Del_1p36.32	1	1
Amp_8q24.13	Del_1p32.3	1	1
Amp_8q24.13	Del_19q13.41	1	1
Amp_10p15.3	Amp_19p13.2	1	1
Amp_10p15.3	Del_1p36.32	1	1
Amp_10p15.3	Del_1p32.3	1	1
Amp_10p15.3	Del_1q43	1	1
Amp_10p15.3	Del_19q13.41	1	1
Amp_10p15.3	Del_19q13.42	1	1
Amp_11q24.1	Del_8q24.3	1	1
Amp_11q24.1	Del_12q12	1	1
Amp_12p13.32	Amp_19p13.2	1	1
Amp_12p13.32	Del_1p36.32	1	1
Amp_12p13.32	Del_1p32.3	1	1
Amp_12p13.32	Del_1q43	1	1
Amp_12p13.32	Del_7p22.3	1	1
Amp_12q14.1	Amp_Xp11.22	1	1
Amp_12q14.1	Del_1p36.32	1	1
Amp_12q14.1	Del_3q13.31	1	1
Amp_12q14.1	Del_7p22.3	1	1
Amp_12q14.1	Del_19q13.41	1	1
Amp_12q14.1	Del_19q13.42	1	1
Amp_13q34	Amp_17q25.1	1	1
Amp_13q34	Amp_Xp11.22	1	1
Amp_13q34	Del_1p36.32	1	1
Amp_13q34	Del_1p32.3	1	1
Amp_13q34	Del_3q13.31	1	1
Amp_13q34	Del_7p22.3	1	1
Amp_13q34	Del_8q24.3	1	1
Amp_17q25.1	Amp_19p13.3	1	1
Amp_17q25.1	Amp_Xp11.22	1	1
Amp_17q25.1	Del_1q43	1	1
Amp_17q25.1	Del_3q13.31	1	1
Amp_17q25.1	Del_5p15.33	1	1
Amp_17q25.1	Del_8q24.3	1	1
Amp_17q25.1	Del_18q23	1	1
Amp_19p13.3	Amp_Xp11.22	1	1
Amp_19p13.3	Del_7p22.3	1	1
Amp_19p13.3	Del_8q24.3	1	1
Amp_19p13.3	Del_14q24.3	1	1
Amp_19p13.2	Amp_Xp11.22	1	1
Amp_19p13.2	Del_3q13.31	1	1
Amp_19p13.2	Del_5q34	1	1
Amp_19p13.2	Del_6p25.3	1	1
Amp_19p13.2	Del_6q22.31	1	1
Amp_19p13.2	Del_6q24.3	1	1
Amp_19p13.2	Del_7p22.3	1	1
Amp_19p13.2	Del_8q24.3	1	1
Amp_19p13.2	Del_12q12	1	1
Amp_19p13.2	Del_Xq21.1	1	1
Amp_Xp11.22	Del_1p32.3	1	1
Amp_Xp11.22	Del_1q43	1	1
Amp_Xp11.22	Del_3p21.31	1	1
Amp_Xp11.22	Del_3q13.31	1	1
Amp_Xp11.22	Del_6p25.3	1	1
Amp_Xp11.22	Del_7p22.3	1	1
Amp_Xp11.22	Del_8q24.3	1	1
Amp_Xp11.22	Del_18q23	1	1
Amp_Xp11.22	Del_Xq21.1	1	1
Del_1p36.32	Del_2q37.3	1	1
Del_1p36.32	Del_3q13.31	1	1
Del_1p36.32	Del_3q29	1	1
Del_1p36.32	Del_5p15.33	1	1
Del_1p36.32	Del_5q34	1	1
Del_1p36.32	Del_6q22.31	1	1
Del_1p36.32	Del_6q24.3	1	1
Del_1p36.32	Del_8q24.3	1	1
Del_1p36.32	Del_9p23	1	1
Del_1p36.32	Del_9p21.3	1	1
Del_1p36.32	Del_10q26.3	1	1
Del_1p36.32	Del_11p15.5	1	1
Del_1p36.32	Del_11p15.1	1	1
Del_1p36.32	Del_Xq21.1	1	1
Del_1p32.3	Del_2q37.3	1	1
Del_1p32.3	Del_3q29	1	1
Del_1p32.3	Del_5p15.33	1	1
Del_1p32.3	Del_5q34	1	1
Del_1p32.3	Del_6q22.31	1	1
Del_1p32.3	Del_6q24.3	1	1
Del_1p32.3	Del_9p23	1	1
Del_1p32.3	Del_9p21.3	1	1
Del_1p32.3	Del_10q26.3	1	1
Del_1p32.3	Del_11p15.5	1	1
Del_1p32.3	Del_11p15.1	1	1
Del_1p32.3	Del_22q13.31	1	1
Del_1p32.3	Del_Xq21.1	1	1
Del_1q43	Del_3p21.31	1	1
Del_1q43	Del_3q13.31	1	1
Del_1q43	Del_3q29	1	1
Del_1q43	Del_5q34	1	1
Del_1q43	Del_6p25.3	1	1
Del_1q43	Del_7p22.3	1	1
Del_1q43	Del_8q24.3	1	1
Del_1q43	Del_12q12	1	1
Del_1q43	Del_13q14.2	1	1
Del_1q43	Del_18q23	1	1
Del_1q43	Del_22q13.31	1	1
Del_3q13.31	Del_5p15.33	1	1
Del_3q29	Del_18q23	1	1
Del_3q29	Del_19q13.41	1	1
Del_3q29	Del_19q13.42	1	1
Del_5p15.33	Del_7p22.3	1	1
Del_5q34	Del_18q23	1	1
Del_7p22.3	Del_18q23	1	1
Del_9p21.3	Del_19q13.41	1	1
Del_9p21.3	Del_19q13.42	1	1
Del_10q26.3	Del_19q13.41	1	1
Del_10q26.3	Del_19q13.42	1	1
Del_11p15.5	Del_19q13.41	1	1
Del_11p15.5	Del_19q13.42	1	1
Del_12q12	Del_18q23	1	1
Del_19q13.41	Del_22q13.31	1	1
Del_19q13.42	Del_22q13.31	1	1
7p-Amp	Del_9p21.3	1.04e-05	1
ATRX	Del_11p15.5	1.04e-09	1
10p-Del	Amp_7p11.2	1.05e-30	1
PTEN	10p-Del	1.07e-11	1
9p-Del	9q-Del	1.07e-12	1
10q-Del	Amp_7q31.2	1.08e-08	1
10q-Del	Amp_12q14.1	1.09e-07	1
RB1	SETD2	1.11e-06	1
CIC	19q-Del	1.11e-48	1
14q-Del	6q-Del	1.12e-06	1
1p-Del	Del_19q13.41	1.15e-78	1
6q-Del	Del_6p25.3	1.16e-08	1
Amp_7q31.2	Amp_19p13.2	1.16e-12	1
19p-Amp	Del_9p21.3	1.17e-05	1
19p-Amp	Amp_7q32.3	1.17e-07	1
9p-Del	Del_6q24.3	1.18e-06	1
PTEN	Del_10q26.3	1.1e-09	1
6q-Del	Del_6q24.3	1.1e-39	1
19q-Del	Del_1p36.32	1.1e-96	1
14q-Del	Del_14q24.3	1.21e-38	1
FUBP1	Del_19q13.41	1.22e-13	1
1p-Del	Del_1p32.3	1.23e-119	1
10q-Del	9p-Del	1.24e-05	1
18q-Del	Del_19q13.42	1.24e-05	1
Del_10q26.3	Del_14q24.3	1.24e-05	1
Del_1p36.32	Del_19q13.42	1.27e-64	1
7p-Amp	Amp_19p13.2	1.28e-09	1
19q-Del	Del_19q13.41	1.28e-91	1
EGFR	7q-Amp	1.29e-06	1
ATRX	TP53	1.29e-60	1
PTEN	10q-Del	1.2e-12	1
CIC	NOTCH1	1.34e-05	1
19q-Del	Del_19q13.42	1.35e-86	1
EGFR	Del_9p21.3	1.37e-07	1
19p-Amp	7p-Amp	1.37e-08	1
Amp_7p11.2	Amp_7q32.3	1.39e-34	1
TP53	Amp_10p15.3	1.3e-09	1
22q-Del	Del_14q24.3	1.42e-05	1
Amp_7q31.2	Del_10q26.3	1.42e-06	1
Del_5p15.33	Del_11p15.1	1.44e-07	1
TP53	Del_2q37.3	1.45e-08	1
Amp_7p11.2	Del_10q26.3	1.46e-18	1
9p-Del	Del_10q26.3	1.48e-05	1
11p-Del	Del_5p15.33	1.48e-06	1
10q-Del	Amp_1q32.1	1.49e-06	1
19p-Amp	10q-Del	1.49e-10	1
ATRX	Del_2q37.3	1.4e-08	1
10p-Del	Del_14q24.3	1.56e-05	1
7q-Amp	Amp_7q32.3	1.56e-68	1
ATRX	Del_11p15.1	1.57e-06	1
IDH1	Del_19q13.42	1.58e-12	1
22q-Del	Del_13q14.2	1.59e-05	1
EGFR	7p-Amp	1.59e-08	1
7q-Amp	10p-Del	1.5e-12	1
Amp_12q14.1	Del_10q26.3	1.63e-07	1
11p-Del	Del_11p15.5	1.67e-40	1
TP53	10p-Amp	1.69e-06	1
Del_19q13.41	Del_19q13.42	1.69e-128	1
7p-Amp	Amp_7q31.2	1.6e-44	1
10q-Del	22q-Del	1.72e-10	1
EGFR	Del_10q26.3	1.72e-12	1
9q-Del	Del_9p21.3	1.73e-07	1
1p-Del	Del_1p36.32	1.74e-118	1
CIC	FUBP1	1.76e-15	1
Amp_1q32.1	Amp_7p11.2	1.81e-11	1
7p-Amp	Amp_12q14.1	1.82e-05	1
14q-Del	Del_6q22.31	1.87e-06	1
10q-Del	Del_9p21.3	1.91e-18	1
ATRX	Amp_8q24.13	1.92e-10	1
IDH1	1p-Del	1.95e-07	1
IDH1	Del_19q13.41	1.95e-11	1
19q-Del	Del_1p32.3	1e-97	1
IDH1	19q-Del	2.01e-08	1
NOTCH1	19q-Del	2.01e-09	1
Del_9p21.3	Del_22q13.31	2.05e-06	1
PTEN	Del_9p21.3	2.07e-05	1
10p-Del	Del_9p23	2.07e-07	1
10p-Del	Del_22q13.31	2.07e-09	1
CIC	IDH1	2.09e-05	1
ATRX	11p-Del	2.11e-05	1
Del_3q29	Del_11p15.1	2.11e-05	1
Del_5q34	Del_11p15.1	2.11e-05	1
4p-Del	Del_4q34.3	2.12e-11	1
Del_9p23	Del_9p21.3	2.15e-59	1
7p-Amp	10q-Del	2.16e-14	1
Amp_7q32.3	Amp_19p13.2	2.18e-10	1
10q-Del	Amp_19p13.2	2.18e-11	1
FUBP1	Del_1p32.3	2.18e-18	1
10p-Del	Amp_7q31.2	2.1e-09	1
Amp_7q31.2	Amp_7q32.3	2.24e-86	1
IDH1	TP53	2.26e-17	1
FUBP1	1p-Del	2.26e-18	1
Amp_8q24.13	Amp_10p15.3	2.28e-05	1
Del_6q22.31	Del_6q24.3	2.35e-50	1
FUBP1	NOTCH1	2.36e-05	1
18p-Del	Del_1p32.3	2.3e-05	1
TP53	Amp_12p13.32	2.41e-08	1
Amp_7q32.3	Del_10q26.3	2.41e-08	1
Amp_7p11.2	Amp_19p13.2	2.43e-09	1
1p-Del	Del_19q13.42	2.43e-74	1
EGFR	Amp_7q32.3	2.48e-06	1
18q-Del	Del_18q23	2.51e-34	1
22q-Del	Del_22q13.31	2.51e-34	1
Del_5q34	Del_12q12	2.53e-05	1
Amp_10p15.3	Del_11p15.5	2.59e-05	1
Del_9p23	Del_22q13.31	2.64e-05	1
CIC	Del_1p32.3	2.65e-53	1
ATRX	IDH1	2.67e-15	1
NOTCH1	Del_19q13.42	2.69e-07	1
12q-Del	Del_12q12	2.6e-20	1
22q-Del	Del_9p21.3	2.72e-08	1
14q-Del	Del_6q24.3	2.73e-05	1
TP53	11p-Del	2.73e-06	1
9p-Del	Del_9p23	2.73e-62	1
Del_9p21.3	Del_14q24.3	2.86e-06	1
NOTCH1	1p-Del	2.87e-09	1
NOTCH1	Del_1p32.3	2.89e-09	1
FUBP1	Del_1p36.32	2.89e-18	1
Del_10q26.3	Del_22q13.31	2.91e-07	1
TP53	Amp_8q24.13	2.91e-12	1
11p-Del	Del_11p15.1	2.91e-45	1
FUBP1	19q-Del	2.92e-17	1
Del_1p32.3	Del_19q13.41	2.94e-68	1
Del_11p15.5	Del_12q12	2.95e-06	1
11p-Del	Del_5q34	2.97e-05	1
13q-Del	22q-Del	2.98e-05	1
7p-Amp	Amp_7p11.2	2e-56	1
10q-Del	Amp_7q32.3	3.04e-09	1
Del_6q24.3	Del_9p23	3.05e-08	1
TP53	8q-Amp	3.11e-05	1
11p-Del	Amp_12p13.32	3.16e-05	1
TP53	Del_11p15.1	3.17e-08	1
19p-Amp	Amp_19p13.2	3.27e-20	1
18q-Del	19q-Del	3.29e-07	1
7p-Amp	10p-Del	3.33e-15	1
12q-Del	Del_11p15.5	3.34e-07	1
4q-Del	Del_4q34.3	3.36e-28	1
Del_5p15.33	Del_11p15.5	3.38e-09	1
Del_3q29	Del_11p15.5	3.3e-05	1
Del_5q34	Del_11p15.5	3.3e-05	1
TP53	12q-Del	3.41e-05	1
EGFR	Amp_1q32.1	3.42e-06	1
6q-Del	Del_14q24.3	3.44e-10	1
NOTCH1	Del_1p36.32	3.46e-09	1
10p-Del	14q-Del	3.49e-09	1
Xp-Del	Xq-Del	3.54e-12	1
Del_3p21.31	Del_11p15.5	3.56e-05	1
Del_6q24.3	Del_9p21.3	3.56e-07	1
Amp_12p13.32	Del_5p15.33	3.57e-05	1
ATRX	Amp_12p13.32	3.57e-07	1
Del_1p36.32	Del_1p32.3	3.57e-107	1
9p-Del	Del_6q22.31	3.65e-07	1
Del_9p23	Del_10q26.3	3.67e-06	1
Del_6q22.31	Del_14q24.3	3.68e-15	1
Amp_19p13.3	Amp_19p13.2	3.81e-10	1
11q-Amp	Amp_11q24.1	3.85e-23	1
12q-Del	Del_11p15.1	3.89e-07	1
6q-Del	Del_6q22.31	3.89e-38	1
6q-Del	Del_9p21.3	3.91e-05	1
EGFR	Amp_7p11.2	3.91e-19	1
Amp_12p13.32	Del_4q34.3	3.97e-05	1
Del_6q24.3	Del_14q24.3	3.99e-14	1
CIC	Del_19q13.41	3.99e-37	1
Del_6q22.31	Del_9p23	4.03e-08	1
18q-Del	Del_1p32.3	4.06e-08	1
Del_2q37.3	Del_11p15.1	4.08e-05	1
TP53	Del_11p15.5	4.28e-14	1
NIPBL	1p-Del	4.29e-05	1
10p-Amp	Amp_10p15.3	4.35e-30	1
19p-Amp	Amp_7q31.2	4.55e-08	1
NF1	PTEN	4.58e-05	1
7q-Amp	Del_10q26.3	4.62e-07	1
EGFR	19p-Amp	4.66e-05	1
CIC	Del_19q13.42	4.72e-35	1
6q-Del	Del_9p23	4.7e-05	1
18q-Del	Del_1p36.32	4.7e-07	1
10p-Del	9p-Del	4.82e-06	1
Amp_19p13.2	Del_10q26.3	4.85e-08	1
10p-Del	Amp_7q32.3	4.95e-10	1
PTEN	Amp_1q32.1	4.98e-05	1
Del_1p36.32	Del_19q13.41	5.16e-69	1
14q-Del	Del_10q26.3	5.2e-07	1
9q-Del	Del_9p23	5.36e-11	1
7q-Amp	Amp_7p11.2	5.36e-40	1
11p-Del	Del_12q12	5.41e-06	1
EGFR	10q-Del	5.43e-19	1
18p-Del	18q-Del	5.64e-32	1
14q-Del	22q-Del	5.71e-07	1
7q-Amp	Amp_7q31.2	5.78e-74	1
10q-Del	Del_22q13.31	5.81e-09	1
Del_2q37.3	Del_11p15.5	5.86e-05	1
10q-Del	Del_10q26.3	5.86e-50	1
18q-Del	Del_19q13.41	5.89e-06	1
IDH1	Del_1p36.32	5.92e-05	1
Del_6p25.3	Del_6q22.31	5.92e-08	1
Del_6q22.31	Del_9p21.3	5.92e-08	1
14q-Del	Del_22q13.31	5.95e-05	1
TP53	Del_5p15.33	5.9e-05	1
7p-Amp	Amp_7q32.3	6.03e-46	1
PTEN	Amp_7p11.2	6.04e-06	1
10p-Del	Amp_12q14.1	6.14e-07	1
7q-Amp	Del_9p21.3	6.1e-06	1
EGFR	PTEN	6.21e-07	1
FUBP1	Del_19q13.42	6.32e-13	1
CIC	1p-Del	6.32e-56	1
Del_1p32.3	Del_19q13.42	6.32e-64	1
7q-Amp	Amp_3q26.33	6.36e-05	1
Amp_3q26.33	Amp_7p11.2	6.36e-05	1
19p-Amp	Del_10q26.3	6.54e-08	1
8q-Amp	Amp_8q24.13	6.55e-25	1
CIC	Del_1p36.32	6.5e-53	1
Amp_12p13.32	Del_11p15.5	6.62e-07	1
10q-Del	Amp_7p11.2	6.65e-29	1
10p-Del	22q-Del	6.66e-11	1
RBPJ	4q-Del	6.78e-06	1
Amp_12p13.32	Del_11p15.1	6.83e-06	1
19p-Amp	Amp_19p13.3	6.8e-13	1
Del_11p15.1	Del_12q12	6.92e-06	1
RBPJ	4p-Del	6.93e-05	1
4p-Del	4q-Del	6.98e-19	1
Del_4q34.3	Del_13q14.2	6e-04	1
19p-Amp	7q-Amp	6e-09	1
19p-Amp	Amp_7p11.2	6e-09	1
13q-Del	Del_13q14.2	7.02e-49	1
19q-Del	1p-Del	7.04e-106	1
Amp_7p11.2	Amp_12q14.1	7.16e-07	1
18p-Del	Del_18q23	7.18e-25	1
EGFR	Amp_19p13.2	7.21e-05	1
22q-Del	Del_9p23	7.21e-06	1
7q-Amp	Amp_19p13.3	7.22e-05	1
14q-Del	Del_9p21.3	7.36e-05	1
10q-Del	Del_9p23	7.42e-07	1
Amp_19p13.2	Del_9p21.3	7.44e-06	1
22q-Del	Del_3p21.31	7.48e-05	1
10p-Del	10q-Del	7.66e-70	1
11p-Del	Amp_Xp11.22	7.68e-05	1
Amp_7p11.2	Del_9p21.3	7.73e-12	1
19p-Amp	10p-Del	7.75e-11	1
9p-Del	Del_9p21.3	7.8e-48	1
7p-Amp	7q-Amp	7.94e-54	1
10p-Del	Del_10q26.3	8.01e-47	1
Del_11p15.5	Del_11p15.1	8.16e-51	1
10p-Del	Del_9p21.3	8.26e-19	1
NOTCH1	Del_19q13.41	8.57e-08	1
10p-Del	Amp_1q32.1	8.63e-07	1
NIPBL	19q-Del	8.77e-05	1
12q-Del	Del_5q34	8.78e-05	1
22q-Del	6q-Del	8.86e-05	1
10p-Amp	Del_11p15.5	8.95e-05	1
Del_9p23	Del_14q24.3	8.98e-05	1
Del_9p21.3	Del_10q26.3	9.01e-17	1
Del_6p25.3	Del_6q24.3	9.08e-09	1
7p-Amp	Del_10q26.3	9.11e-11	1
9p-Del	Del_22q13.31	9.16e-05	1
Del_13q14.2	Del_22q13.31	9.16e-05	1
22q-Del	Del_10q26.3	9.19e-09	1
EGFR	Amp_7q31.2	9.27e-05	1
10p-Del	Amp_19p13.2	9.4e-12	1
7q-Amp	Amp_19p13.2	9.54e-11	1
Amp_3q26.33	Amp_12q14.1	9.55e-05	1
Del_3p21.31	Del_9p23	9.57e-05	1
7q-Amp	10q-Del	9.65e-12	1
18q-Del	1p-Del	9.69e-07	1
10q-Del	14q-Del	9.73e-09	1
18p-Del	19q-Del	9.74e-05	1
10q-Del	Del_14q24.3	9.79e-06	1
EGFR	10p-Del	9.81e-20	1
TP53	Del_5q34	9.82e-05	1
11p-Del	12q-Del	9.84e-07	1
Amp_7p11.2	Amp_7q31.2	9.93e-32	1
