gene1	gene2	pval	qval
SPOP	Del_21q22.3	0.000478	1
SPOP	Del_17p13.1	0.000723	1
SPOP	Del_10q23.31	0.00142	1
Del_3p13	Del_5q21.1	0.00682	1
SPOP	Del_17q21.31	0.0084	1
SPOP	Del_3p13	0.0143	1
Amp_7q22.1	Del_10q23.31	0.0143	1
Del_4q28.2	Del_21q22.3	0.0242	1
Del_6q14.3	Del_21q22.3	0.0256	1
Del_2q22.1	Del_3p13	0.0262	1
Del_5q21.1	Del_17q21.31	0.0273	1
FOXA1	Del_21q22.3	0.0317	1
Del_2q22.3	Del_3p13	0.0376	1
Del_5q21.1	Del_21q22.3	0.0396	1
8p-Amp	Del_21q22.3	0.0416	1
Amp_8q24.21	Del_1p31.3	0.0531	1
Amp_7q22.1	Del_21q22.3	0.0541	1
MLL2	Del_21q22.3	0.0545	1
Del_3p13	Del_5q13.2	0.0754	1
8p-Amp	8p-Del	0.0763	1
Amp_11q13.2	Del_17p13.1	0.0803	1
SPOP	Del_8p23.2	0.0852	1
7p-Amp	Del_3p13	0.0854	1
Amp_3q26.2	Del_17q21.31	0.0927	1
FOXA1	Del_8p23.2	0.0951	1
Amp_7p14.3	Del_3p13	0.0959	1
Amp_11q13.2	Del_10q23.31	0.0975	1
8q-Amp	Del_10q23.31	0.0995	1
Del_2q22.1	Del_21q22.3	0.101	1
7q-Amp	Del_10q23.31	0.103	1
Amp_8p11.23	Del_10q23.31	0.103	1
Del_10q23.31	Del_11q22.3	0.103	1
Amp_3q21.3	Del_17q21.31	0.105	1
MLL2	Del_13q22.1	0.112	1
SPOP	18p-Del	0.112	1
Amp_8p11.23	Del_17q21.31	0.12	1
SPOP	Del_18q23	0.121	1
BRAF	Del_21q22.3	0.122	1
Amp_Xq27.1	Del_16q24.1	0.122	1
Amp_Xq27.1	Del_21q22.3	0.122	1
Del_6q14.3	Del_17q21.31	0.123	1
SPOP	Del_19q13.2	0.127	1
7p-Amp	Del_10q23.31	0.133	1
18p-Del	Del_3p13	0.135	1
Amp_7q22.1	Del_3p13	0.135	1
8q-Amp	Del_21q22.3	0.139	1
8q-Amp	8p-Del	0.14	1
MLL2	Del_13q14.13	0.143	1
SPOP	Del_21q22.2	0.144	1
FOXA1	Del_18q21.31	0.145	1
KDM6A	Del_8p23.2	0.151	1
7q-Amp	Del_3p13	0.152	1
Del_5q13.2	Del_17q21.31	0.158	1
ATM	Del_21q22.3	0.16	1
Amp_8q22.1	Del_21q22.3	0.161	1
Amp_14q21.1	Del_16q22.3	0.161	1
Amp_Xq27.1	Del_16q22.3	0.161	1
FOXA1	Del_18q23	0.166	1
SPOP	18q-Del	0.169	1
Del_2q22.1	Del_19q13.2	0.171	1
Del_4q28.2	Del_17q21.31	0.176	1
FOXA1	Del_17p13.1	0.179	1
Del_4q28.2	Del_10q23.31	0.18	1
8p-Del	Amp_14q21.1	0.182	1
Del_2q22.3	Del_11q23.2	0.184	1
Amp_1q22	Del_12p13.1	0.198	1
FOXA1	Del_17q21.31	0.2	1
Del_12p13.1	Del_19q13.2	0.203	1
BRAF	Del_13q22.1	0.205	1
Amp_Xq27.1	Del_13q22.1	0.205	1
KDM6A	Del_21q22.3	0.207	1
MED12	Del_21q22.3	0.207	1
3p-Amp	Del_21q22.3	0.207	1
Amp_20q13.2	Del_21q22.3	0.207	1
SPOP	Del_16q24.1	0.21	1
7q-Amp	Del_21q22.3	0.21	1
Amp_8p11.23	Del_21q22.3	0.21	1
12p-Del	Del_2q22.1	0.211	1
Del_2q22.1	Del_15q21.3	0.211	1
Del_3p13	Del_12q24.32	0.213	1
ATM	Del_10q23.31	0.215	1
FOXA1	Del_10q23.31	0.215	1
7p-Amp	Del_21q22.3	0.215	1
MED12	Del_17p13.1	0.223	1
TP53	Del_6q14.3	0.223	1
8p-Del	Amp_Xp22.11	0.226	1
8p-Amp	Del_17q21.31	0.227	1
Amp_8q22.1	Del_1q42.3	0.227	1
MED12	Del_6q14.3	0.228	1
ZMYM3	Del_6q14.3	0.228	1
8q-Del	Del_6q14.3	0.228	1
Amp_Xq27.1	Del_12p13.1	0.238	1
FOXA1	Del_3p13	0.239	1
3q-Amp	Del_21q22.3	0.24	1
7p-Amp	Del_1q42.3	0.243	1
SPOP	TP53	0.246	1
12p-Del	Del_2q22.3	0.246	1
Del_2q22.3	Del_15q21.3	0.246	1
IDH1	Del_8p21.3	0.248	1
KDM6A	Del_10q23.31	0.25	1
3p-Amp	Del_10q23.31	0.25	1
Amp_12q23.1	Del_10q23.31	0.25	1
Del_2q22.1	Del_17p13.1	0.251	1
PTEN	Del_8p23.2	0.255	1
SPOP	8p-Del	0.256	1
8p-Amp	Del_10q23.31	0.256	1
FOXA1	8p-Del	0.257	1
MLL2	Del_5q13.2	0.257	1
3q-Amp	Del_17q21.31	0.257	1
Amp_7p14.3	Del_1q42.3	0.26	1
Del_2q22.1	Del_17q21.31	0.26	1
TP53	Del_11q23.2	0.265	1
8p-Amp	Del_3p13	0.267	1
SPOP	17p-Del	0.269	1
Amp_17q23.2	Del_21q22.3	0.27	1
Amp_Xq21.1	Del_16q24.1	0.27	1
7p-Amp	Del_12p13.1	0.272	1
PTEN	Del_5q11.2	0.274	1
Amp_8q22.1	Del_10q23.31	0.279	1
KDM6A	8p-Del	0.28	1
KDM6A	Del_8p21.3	0.28	1
MED12	Del_8p21.3	0.28	1
Amp_7p14.3	Del_17q21.31	0.28	1
7p-Amp	18p-Del	0.281	1
18p-Del	Amp_8q24.21	0.282	1
Amp_Xp22.11	Del_12p13.1	0.285	1
TP53	Del_11q22.3	0.286	1
Amp_11q13.2	Del_17q21.31	0.291	1
Amp_Xq21.1	Del_6q14.3	0.292	1
18q-Del	Del_4q28.2	0.297	1
MLL2	Del_3p13	0.299	1
17p-Del	Amp_8p11.23	0.302	1
MLL2	Del_10q23.31	0.304	1
8q-Amp	Del_17q21.31	0.304	1
Amp_7p14.3	Del_12p13.1	0.304	1
Del_1p22.1	Del_12p13.1	0.304	1
MED12	Del_13q22.1	0.306	1
Del_2q22.3	Del_21q22.3	0.309	1
Amp_8q22.1	Del_3p13	0.31	1
Amp_8q24.21	Del_3p13	0.31	1
BRAF	Del_5q11.2	0.316	1
Amp_3q21.3	Del_1q42.3	0.317	1
Amp_7q22.1	Del_1q42.3	0.317	1
Del_1p31.3	Del_11q23.2	0.317	1
SPOP	Del_1p31.3	0.321	1
Amp_Xq21.1	Del_16q22.3	0.322	1
Amp_Xq25	Del_16q22.3	0.322	1
Del_2q22.1	Del_10q23.31	0.324	1
CTNNB1	Del_5q21.1	0.325	1
FOXA1	18q-Del	0.325	1
TP53	Del_2q22.1	0.325	1
PTEN	Del_5q13.2	0.33	1
Amp_3q26.2	Del_21q22.3	0.33	1
Amp_11q13.2	Del_3p13	0.334	1
SPOP	Del_8p21.3	0.335	1
7q-Amp	Del_1q42.3	0.338	1
Amp_8p11.23	Del_1p31.3	0.338	1
Amp_8p11.23	Del_1q42.3	0.338	1
KDM6A	Del_12p13.1	0.342	1
ZMYM3	Del_12p13.1	0.342	1
3p-Amp	Del_12p13.1	0.342	1
Amp_20q13.2	Del_12p13.1	0.342	1
Amp_7p14.3	Del_10q23.31	0.343	1
8p-Del	Amp_Xp21.1	0.347	1
SPOP	Del_16q22.3	0.348	1
Amp_8q22.1	Del_21q22.2	0.348	1
Amp_8q24.21	Del_21q22.2	0.348	1
7p-Amp	12p-Del	0.349	1
7p-Amp	Del_15q21.3	0.349	1
Amp_16q11.2	Del_21q22.3	0.35	1
17p-Del	Del_2q22.1	0.351	1
HRAS	Del_21q22.3	0.352	1
Xp-Del	Del_21q22.3	0.352	1
Xq-Del	Del_21q22.3	0.352	1
Amp_15q11.2	Del_21q22.3	0.352	1
13q-Del	18p-Del	0.357	1
18p-Del	Amp_3q21.3	0.357	1
18p-Del	Amp_7q22.1	0.357	1
Amp_7q22.1	Del_11q23.2	0.357	1
TP53	Del_1p22.1	0.358	1
Del_5q21.1	Del_8p23.2	0.359	1
Del_5q21.1	Del_21q22.2	0.361	1
Del_3p13	Del_6q14.3	0.362	1
Del_5q21.1	Del_17p13.1	0.362	1
Del_11q23.2	Del_17q21.31	0.366	1
12p-Del	Amp_7p14.3	0.367	1
1q-Amp	Del_17p13.1	0.368	1
Del_4q28.2	Del_17p13.1	0.372	1
PTEN	Del_3p13	0.373	1
Amp_1q22	Del_3p13	0.373	1
Amp_Xq25	Del_13q22.1	0.373	1
BRAF	Del_5q13.2	0.374	1
Amp_14q21.1	Del_17q21.31	0.374	1
Amp_15q11.2	Del_6q14.3	0.374	1
Amp_Xq27.1	Del_17q21.31	0.374	1
Amp_1q22	Del_17p13.1	0.375	1
Amp_Xp22.11	Del_5q21.1	0.375	1
IDH1	Del_13q14.13	0.376	1
Amp_3q26.2	Del_12p13.1	0.376	1
Amp_3q21.3	Del_21q22.3	0.377	1
7q-Amp	18p-Del	0.378	1
18p-Del	Amp_8p11.23	0.378	1
Amp_14q21.1	Del_8p21.3	0.378	1
Del_11q23.2	Del_19q13.2	0.378	1
SPOP	Del_11q23.2	0.381	1
Amp_3q26.2	Del_21q22.2	0.381	1
TP53	Del_2q22.3	0.382	1
PTEN	Del_6q14.3	0.384	1
SPOP	Amp_Xq27.1	0.384	1
8q-Amp	Del_3p13	0.384	1
FOXA1	TP53	0.386	1
IDH1	Del_8p23.2	0.391	1
Amp_7p14.3	Del_1p22.1	0.393	1
PTEN	Del_2q22.1	0.397	1
Xp-Del	Del_10q23.31	0.398	1
Xq-Del	Del_10q23.31	0.398	1
Del_5q21.1	Del_9p23	0.398	1
Del_5q21.1	Del_15q21.3	0.398	1
Amp_8p11.23	Del_19q13.2	0.4	1
Amp_3q21.3	Del_21q22.2	0.401	1
Amp_7q22.1	Del_21q22.2	0.401	1
TP53	Del_5q21.1	0.405	1
Amp_3q26.2	Del_15q21.3	0.405	1
Amp_4q13.3	Del_12p13.1	0.409	1
Amp_17q23.2	Del_12p13.1	0.409	1
Amp_Xp21.1	Del_12p13.1	0.409	1
Amp_8q24.21	Del_17q21.31	0.411	1
Del_4q28.2	Del_18q21.31	0.411	1
Del_5q11.2	Del_17q21.31	0.411	1
KDM6A	Del_18q21.31	0.414	1
MED12	Del_18q21.31	0.414	1
ZMYM3	Del_18q21.31	0.414	1
3p-Amp	Del_18q21.31	0.414	1
SPOP	Del_18q21.31	0.415	1
Amp_7q22.1	Del_12p13.1	0.415	1
9q-Amp	Del_3p13	0.417	1
Amp_14q21.1	Del_3p13	0.417	1
Amp_Xq27.1	Del_3p13	0.417	1
BRAF	Del_16q24.1	0.419	1
Amp_1q22	Del_10q23.31	0.419	1
Amp_14q21.1	Del_21q22.3	0.419	1
Amp_16q11.2	Del_10q23.31	0.419	1
PTEN	8q-Amp	0.422	1
KDM6A	Amp_8q22.1	0.423	1
KDM6A	Amp_8q24.21	0.423	1
MED12	Amp_8q22.1	0.423	1
MED12	Amp_8q24.21	0.423	1
MED12	Del_5q11.2	0.423	1
ZMYM3	Del_5q11.2	0.423	1
8q-Del	Amp_8q22.1	0.423	1
8q-Del	Amp_8q24.21	0.423	1
8q-Del	Del_5q11.2	0.423	1
Amp_8p11.23	Del_21q22.2	0.423	1
Amp_8q24.21	Del_21q22.3	0.423	1
Amp_8q24.21	Del_1p22.1	0.424	1
Amp_Xp22.11	Del_5q13.2	0.424	1
12p-Del	Amp_7q22.1	0.425	1
12p-Del	Del_11q23.2	0.425	1
13q-Del	Del_15q21.3	0.425	1
Amp_3q21.3	Del_15q21.3	0.425	1
Amp_7q22.1	Del_15q21.3	0.425	1
Del_10q23.31	Del_12q24.32	0.426	1
13q-Del	Del_3p13	0.43	1
Amp_3q26.2	Del_1p22.1	0.431	1
MED12	Del_5q21.1	0.432	1
PIK3CA	Del_5q21.1	0.432	1
ZMYM3	Del_5q21.1	0.432	1
8q-Del	Del_5q21.1	0.432	1
SPOP	Amp_Xp22.11	0.434	1
PTEN	Del_2q22.3	0.435	1
Amp_16q11.2	Del_2q22.3	0.435	1
FOXA1	Del_1p31.3	0.439	1
CTNNB1	Del_2q22.1	0.44	1
Amp_14q21.1	Del_2q22.1	0.44	1
Amp_Xq27.1	Del_2q22.1	0.44	1
KDM6A	Del_18q23	0.441	1
MED12	Del_18q23	0.441	1
ZMYM3	Del_18q23	0.441	1
3p-Amp	Del_18q23	0.441	1
3q-Amp	Del_12p13.1	0.442	1
8q-Amp	Del_1p31.3	0.442	1
BRAF	Del_17p13.1	0.444	1
Amp_Xq27.1	Del_17p13.1	0.444	1
7q-Amp	12p-Del	0.447	1
7q-Amp	Del_15q21.3	0.447	1
12p-Del	Del_11q22.3	0.447	1
Del_9p23	Del_19q13.2	0.447	1
Del_15q21.3	Del_19q13.2	0.447	1
TP53	3q-Amp	0.448	1
18p-Del	Del_4q28.2	0.451	1
Amp_3q21.3	Del_1p22.1	0.451	1
Amp_9q33.3	Del_11q23.2	0.451	1
Del_4q28.2	Del_18q23	0.451	1
Amp_7p14.3	Del_21q22.3	0.452	1
Amp_Xq27.1	Del_6q14.3	0.453	1
HRAS	Del_13q22.1	0.455	1
22q-Del	Del_13q22.1	0.455	1
Del_11p11.2	Del_21q22.3	0.456	1
AKT1	Del_16q24.1	0.457	1
AKT1	Del_21q22.3	0.457	1
IDH1	Del_16q24.1	0.457	1
IDH1	Del_21q22.3	0.457	1
7q-Amp	Del_12p13.1	0.457	1
Amp_8p11.23	Del_3p13	0.463	1
PTEN	8p-Del	0.465	1
8q-Amp	Amp_Xq27.1	0.465	1
16q-Del	Amp_14q21.1	0.465	1
16q-Del	Amp_Xq27.1	0.465	1
Amp_Xp22.11	Del_3p13	0.466	1
Del_5q11.2	Del_6p25.1	0.466	1
8p-Amp	Del_1q42.3	0.468	1
Del_1q42.3	Del_11p11.2	0.468	1
MED12	Del_13q14.13	0.47	1
Amp_8p11.23	Del_1p22.1	0.472	1
Del_4q28.2	Del_19q13.2	0.472	1
IDH1	Del_17p13.1	0.474	1
XPO5	Del_17p13.1	0.474	1
Del_6q14.3	Del_19q13.2	0.476	1
BRAF	Del_2q22.3	0.477	1
CTNNB1	Del_2q22.3	0.477	1
Amp_Xq27.1	Del_2q22.3	0.477	1
ATM	18p-Del	0.478	1
FOXA1	18p-Del	0.478	1
FOXA1	Del_11q23.2	0.478	1
18p-Del	Del_6p25.1	0.478	1
AKT1	Del_6q14.3	0.479	1
IDH1	Del_6q14.3	0.479	1
KDM6A	Del_17q21.31	0.479	1
MED12	Del_5q13.2	0.479	1
MED12	Del_17q21.31	0.479	1
XPO5	Del_6q14.3	0.479	1
ZMYM3	Del_5q13.2	0.479	1
3p-Amp	Del_17q21.31	0.479	1
Amp_12q23.1	Del_17q21.31	0.479	1
Amp_20q13.2	Del_17q21.31	0.479	1
10p-Del	Del_18q21.31	0.48	1
TP53	Amp_11q13.2	0.483	1
Del_9p23	Del_13q22.1	0.483	1
SPOP	12p-Del	0.485	1
SPOP	Del_9p23	0.485	1
SPOP	Del_15q21.3	0.485	1
BRAF	Del_10q23.31	0.487	1
CTNNB1	Del_10q23.31	0.487	1
Del_11p11.2	Del_17p13.1	0.487	1
MED12	SPOP	0.489	1
PIK3CA	SPOP	0.489	1
SPOP	ZMYM3	0.489	1
SPOP	8q-Del	0.489	1
10p-Del	Amp_8q22.1	0.489	1
10p-Del	Amp_8q24.21	0.489	1
10p-Del	Del_5q11.2	0.489	1
10q-Del	Amp_8q22.1	0.489	1
10q-Del	Amp_8q24.21	0.489	1
10q-Del	Del_5q11.2	0.489	1
Amp_8q22.1	Amp_Xq21.1	0.489	1
Amp_8q24.21	Amp_Xq21.1	0.489	1
Amp_Xp22.11	Del_2q22.1	0.489	1
Amp_Xq21.1	Del_5q11.2	0.489	1
HRAS	Del_12p13.1	0.49	1
MED12	Del_8p23.2	0.49	1
ZMYM3	Del_8p23.2	0.49	1
Amp_8q24.21	Del_1q42.3	0.49	1
Amp_15q11.2	Del_12p13.1	0.49	1
Amp_3q26.2	Del_2q22.3	0.491	1
12p-Del	Del_15q21.3	0.492	1
Del_4q28.2	Del_21q22.2	0.494	1
Del_12q24.32	Del_21q22.2	0.494	1
BRAF	Del_16q22.3	0.496	1
Amp_11q13.2	Del_12p13.1	0.496	1
6q-Del	Del_21q22.3	0.497	1
Amp_Xp22.11	Del_21q22.3	0.497	1
FOXA1	Del_19q13.2	0.498	1
10q-Del	Del_5q21.1	0.498	1
Amp_8p11.23	Del_6p25.1	0.498	1
Amp_Xp21.1	Del_5q21.1	0.498	1
Amp_Xq21.1	Del_5q21.1	0.498	1
Del_2q22.1	Del_8p23.2	0.498	1
MLL2	Del_1p31.3	0.499	1
3q-Amp	Del_1q42.3	0.499	1
17p-Del	Amp_11q13.2	0.499	1
8q-Amp	Del_2q22.3	0.5	1
AKT1	Del_10q23.31	0.502	1
IDH1	Del_10q23.31	0.502	1
XPO5	Del_10q23.31	0.502	1
BRAF	18q-Del	0.504	1
18q-Del	Amp_Xq27.1	0.504	1
18q-Del	Del_2q22.1	0.504	1
10p-Del	Del_18q23	0.506	1
AKT1	Del_16q22.3	0.507	1
IDH1	Del_16q22.3	0.507	1
Del_1p31.3	Del_5q21.1	0.507	1
Del_1p22.1	Del_17q21.31	0.509	1
Del_12q24.32	Del_17q21.31	0.509	1
12p-Del	Del_1p22.1	0.517	1
12p-Del	Del_4q28.2	0.517	1
Amp_9q33.3	Del_15q21.3	0.517	1
Del_1p22.1	Del_9p23	0.517	1
Del_1p22.1	Del_15q21.3	0.517	1
Del_4q28.2	Del_9p23	0.517	1
Del_4q28.2	Del_15q21.3	0.517	1
MLL2	Amp_3q26.2	0.518	1
ATM	Del_21q22.2	0.52	1
FOXA1	Del_21q22.2	0.52	1
KDM6A	Del_3p13	0.52	1
MED12	Del_3p13	0.52	1
PTEN	TP53	0.52	1
TP53	Amp_16q11.2	0.52	1
3p-Amp	Del_3p13	0.52	1
Amp_12q23.1	Del_3p13	0.52	1
Amp_20q13.2	Del_3p13	0.52	1
Del_3p13	Del_5q11.2	0.52	1
SPOP	Amp_9q33.3	0.524	1
Amp_Xp22.11	Del_2q22.3	0.524	1
Del_11p11.2	Del_19q13.2	0.526	1
7p-Amp	Del_17q21.31	0.527	1
Del_6q14.3	Del_21q22.2	0.529	1
Amp_Xp22.11	Del_6q14.3	0.53	1
IDH1	8p-Del	0.531	1
SMAD4	8p-Del	0.531	1
Del_2q22.1	Del_21q22.2	0.531	1
Amp_11q13.2	Del_1p31.3	0.532	1
Amp_11q13.2	Del_1q42.3	0.532	1
PTEN	7p-Amp	0.535	1
17p-Del	Amp_1q22	0.535	1
MLL2	13q-Del	0.536	1
MLL2	Amp_3q21.3	0.536	1
MLL2	Amp_7q22.1	0.536	1
MLL2	Del_11q23.2	0.536	1
3q-Amp	18p-Del	0.536	1
TP53	7p-Amp	0.538	1
Del_11p11.2	Del_18q23	0.538	1
Del_10q23.31	Del_11p11.2	0.54	1
ATM	Del_15q21.3	0.542	1
FOXA1	12p-Del	0.542	1
FOXA1	Del_9p23	0.542	1
FOXA1	Del_15q21.3	0.542	1
KDM6A	Del_2q22.1	0.542	1
ZMYM3	Del_2q22.1	0.542	1
10p-Del	Del_5q13.2	0.542	1
10p-Del	Del_17q21.31	0.542	1
10q-Del	Del_5q13.2	0.542	1
12p-Del	Del_6p25.1	0.542	1
8q-Del	Del_2q22.1	0.542	1
Amp_4q13.3	Del_17q21.31	0.542	1
Amp_Xp21.1	Del_5q13.2	0.542	1
Amp_Xq21.1	Del_5q13.2	0.542	1
Amp_Xq25	Del_17q21.31	0.542	1
Del_6p25.1	Del_9p23	0.542	1
3q-Amp	Del_18q21.31	0.547	1
8p-Amp	Del_21q22.2	0.547	1
Del_11p11.2	Del_21q22.2	0.547	1
Amp_3q21.3	Del_18q21.31	0.549	1
PTEN	Amp_7p14.3	0.551	1
3q-Amp	Del_17p13.1	0.551	1
SPOP	10p-Del	0.552	1
SPOP	10q-Del	0.552	1
SPOP	Amp_4q13.3	0.552	1
SPOP	Amp_17q23.2	0.552	1
SPOP	Amp_Xp21.1	0.552	1
AKT1	Del_13q22.1	0.555	1
IDH1	Del_13q22.1	0.555	1
Amp_16q11.2	Del_12p13.1	0.555	1
MLL2	Amp_8p11.23	0.556	1
3q-Amp	Del_11q22.3	0.556	1
KLHL2	Del_18q21.31	0.557	1
PTEN	Del_8p21.3	0.557	1
Amp_13q12.11	Del_18q21.31	0.557	1
Amp_15q11.2	Del_18q21.31	0.557	1
MLL2	Del_5q11.2	0.559	1
TP53	9q-Amp	0.559	1
TP53	Amp_14q21.1	0.559	1
TP53	Amp_Xq27.1	0.559	1
TP53	Amp_7p14.3	0.563	1
KDM6A	8q-Amp	0.564	1
KDM6A	16q-Del	0.564	1
MED12	8q-Amp	0.564	1
MED12	16q-Del	0.564	1
SPOP	8q-Amp	0.564	1
SPOP	16q-Del	0.564	1
SPOP	Del_6p25.1	0.564	1
ZMYM3	8q-Amp	0.564	1
8q-Amp	8q-Del	0.564	1
18p-Del	Amp_8q22.1	0.564	1
ATM	Del_1p22.1	0.565	1
FOXA1	Del_1p22.1	0.565	1
HRAS	Amp_8q22.1	0.565	1
HRAS	Amp_8q24.21	0.565	1
HRAS	Del_5q11.2	0.565	1
1q-Amp	Amp_8q22.1	0.565	1
Amp_15q11.2	Del_5q11.2	0.565	1
8q-Amp	Del_21q22.2	0.566	1
Del_2q22.1	Del_9p23	0.566	1
18p-Del	Amp_11q13.2	0.568	1
Amp_1q22	Del_1p31.3	0.568	1
Amp_1q22	Del_1q42.3	0.568	1
Amp_16q11.2	Del_1q42.3	0.568	1
8p-Amp	Del_15q21.3	0.569	1
12p-Del	Del_11p11.2	0.569	1
8p-Del	Del_5q21.1	0.569	1
Amp_14q21.1	Del_13q22.1	0.569	1
Amp_9q33.3	Del_3p13	0.57	1
Del_2q22.3	Del_17q21.31	0.57	1
Del_3p13	Del_4q28.2	0.57	1
6q-Del	Del_16q22.3	0.571	1
HRAS	Del_5q21.1	0.573	1
Amp_15q11.2	Del_5q21.1	0.573	1
BRAF	7p-Amp	0.574	1
CTNNB1	17p-Del	0.574	1
TP53	Del_3p13	0.574	1
7p-Amp	Amp_Xq27.1	0.574	1
MED12	Del_2q22.3	0.575	1
ZMYM3	Del_2q22.3	0.575	1
3p-Amp	Del_2q22.3	0.575	1
Amp_20q13.2	Del_2q22.3	0.575	1
Amp_Xq21.1	Del_13q14.13	0.575	1
Amp_Xq25	Del_13q14.13	0.575	1
MLL2	Del_21q22.2	0.576	1
3q-Amp	Del_21q22.2	0.576	1
18p-Del	Del_5q21.1	0.58	1
KLHL2	Del_18q23	0.581	1
Xp-Del	Del_18q23	0.581	1
Xq-Del	Del_18q23	0.581	1
Amp_15q11.2	Del_18q23	0.581	1
Amp_17q23.2	Del_3p13	0.581	1
Amp_Xp21.1	Del_3p13	0.581	1
Amp_Xq25	Del_3p13	0.581	1
KDM6A	Del_16q24.1	0.584	1
MED12	Del_16q24.1	0.584	1
PTEN	Amp_3q26.2	0.584	1
3q-Amp	Del_18q23	0.584	1
12p-Del	Del_6q14.3	0.584	1
Amp_12q23.1	Del_21q22.3	0.584	1
Amp_20q13.2	Del_16q24.1	0.584	1
Del_6q14.3	Del_15q21.3	0.584	1
Del_1p31.3	Del_12p13.1	0.585	1
AKT1	Del_12p13.1	0.586	1
IDH1	Del_12p13.1	0.586	1
XPO5	Del_12p13.1	0.586	1
Amp_11q13.2	Del_19q13.2	0.587	1
Amp_8p11.23	Del_18q21.31	0.588	1
Amp_8q24.21	Del_10q23.31	0.588	1
Del_11q22.3	Del_18q21.31	0.588	1
ATM	FOXA1	0.589	1
ATM	Del_6p25.1	0.589	1
BRAF	Amp_7p14.3	0.589	1
CTNNB1	Amp_7p14.3	0.589	1
18q-Del	Amp_8p11.23	0.589	1
Amp_7p14.3	Amp_Xq27.1	0.589	1
Amp_11q13.2	Del_21q22.3	0.589	1
Amp_3q26.2	Del_17p13.1	0.591	1
Del_11p11.2	Del_17q21.31	0.591	1
Del_1q42.3	Del_17q21.31	0.593	1
Del_9p23	Del_13q14.13	0.595	1
Del_12q24.32	Del_21q22.3	0.596	1
MLL2	12p-Del	0.597	1
MLL2	Del_9p23	0.597	1
3q-Amp	12p-Del	0.597	1
3q-Amp	Del_15q21.3	0.597	1
KDM6A	18q-Del	0.599	1
MED12	18q-Del	0.599	1
ZMYM3	18q-Del	0.599	1
3p-Amp	18q-Del	0.599	1
8q-Amp	Del_15q21.3	0.599	1
18p-Del	Del_13q22.1	0.599	1
18q-Del	Amp_20q13.2	0.599	1
10q-Del	Del_2q22.1	0.6	1
Amp_17q23.2	Del_2q22.1	0.6	1
Amp_Xp21.1	Del_2q22.1	0.6	1
Amp_Xq21.1	Del_2q22.1	0.6	1
Amp_Xq25	Del_2q22.1	0.6	1
3q-Amp	Del_10q23.31	0.601	1
Del_3p13	Del_13q22.1	0.601	1
PTEN	Amp_3q21.3	0.602	1
PTEN	Amp_7q22.1	0.602	1
TP53	6q-Del	0.602	1
18p-Del	Amp_1q22	0.602	1
BRAF	Del_1p31.3	0.605	1
CTNNB1	Del_1p31.3	0.605	1
CTNNB1	Del_1q42.3	0.605	1
SPOP	Del_12p13.1	0.605	1
9q-Amp	Del_1p31.3	0.605	1
9q-Amp	Del_1q42.3	0.605	1
Amp_14q21.1	Del_1p31.3	0.605	1
Amp_Xq27.1	Del_1p31.3	0.605	1
Amp_Xq27.1	Del_1q42.3	0.605	1
Del_6q14.3	Del_10q23.31	0.605	1
KDM6A	Del_17p13.1	0.606	1
3p-Amp	Del_17p13.1	0.606	1
Amp_11q13.2	Del_21q22.2	0.606	1
Amp_12q23.1	Del_17p13.1	0.606	1
Amp_20q13.2	Del_17p13.1	0.606	1
ATM	Del_3p13	0.608	1
BRAF	Del_13q14.13	0.61	1
Amp_14q21.1	Del_13q14.13	0.61	1
MLL2	Del_16q22.3	0.611	1
SPOP	Del_1q42.3	0.611	1
Amp_8q22.1	Del_17q21.31	0.611	1
ATM	Del_11p11.2	0.614	1
HRAS	Del_17q21.31	0.614	1
KLHL2	Del_5q13.2	0.614	1
KLHL2	Del_17q21.31	0.614	1
PIK3CA	Del_6q14.3	0.614	1
TP53	Amp_3q26.2	0.614	1
8p-Amp	Del_6p25.1	0.614	1
22q-Del	Del_17q21.31	0.614	1
Amp_13q12.11	Del_17q21.31	0.614	1
Amp_15q11.2	Del_5q13.2	0.614	1
MLL2	Del_8p21.3	0.615	1
Del_2q22.3	Del_9p23	0.616	1
BRAF	Del_12p13.1	0.617	1
CTNNB1	Del_12p13.1	0.617	1
MLL2	Amp_9q33.3	0.618	1
MLL2	Del_1p22.1	0.618	1
MLL2	Del_12q24.32	0.618	1
3q-Amp	Del_1p22.1	0.618	1
PTEN	7q-Amp	0.619	1
PTEN	Amp_8p11.23	0.619	1
PTEN	Del_19q13.2	0.619	1
Amp_1q22	Del_19q13.2	0.619	1
BRAF	Amp_3q26.2	0.621	1
CTNNB1	Amp_3q26.2	0.621	1
8q-Amp	10p-Del	0.621	1
8q-Amp	10q-Del	0.621	1
8q-Amp	Amp_Xp21.1	0.621	1
8q-Amp	Amp_Xq21.1	0.621	1
8q-Amp	Amp_Xq25	0.621	1
9q-Amp	Amp_3q26.2	0.621	1
10q-Del	16q-Del	0.621	1
16q-Del	Amp_Xq21.1	0.621	1
16q-Del	Amp_Xq25	0.621	1
Del_5q21.1	Del_10q23.31	0.621	1
HRAS	SPOP	0.622	1
SPOP	1q-Amp	0.622	1
SPOP	22q-Del	0.622	1
SPOP	Amp_13q12.11	0.622	1
SPOP	Amp_15q11.2	0.622	1
18p-Del	Del_13q14.13	0.622	1
Amp_4q13.3	Del_2q22.3	0.631	1
Amp_17q23.2	Del_2q22.3	0.631	1
Amp_Xp21.1	Del_2q22.3	0.631	1
Amp_Xq25	Del_2q22.3	0.631	1
8q-Amp	Del_1p22.1	0.633	1
Amp_8p11.23	Del_18q23	0.633	1
Amp_7p14.3	Del_1p31.3	0.634	1
Amp_14q21.1	Del_8p23.2	0.634	1
Amp_Xq27.1	Del_8p23.2	0.634	1
Del_2q22.3	Del_8p23.2	0.634	1
MLL2	Del_17q21.31	0.635	1
BRAF	13q-Del	0.637	1
BRAF	18p-Del	0.637	1
BRAF	Amp_3q21.3	0.637	1
BRAF	Amp_7q22.1	0.637	1
BRAF	Del_11q23.2	0.637	1
CTNNB1	18p-Del	0.637	1
CTNNB1	Amp_3q21.3	0.637	1
9q-Amp	Amp_3q21.3	0.637	1
9q-Amp	Del_11q23.2	0.637	1
13q-Del	Amp_14q21.1	0.637	1
13q-Del	Amp_Xq27.1	0.637	1
18p-Del	Amp_Xq27.1	0.637	1
Amp_3q21.3	Amp_Xq27.1	0.637	1
Amp_7q22.1	Amp_Xq27.1	0.637	1
Amp_Xq27.1	Del_11q23.2	0.637	1
ATM	Del_2q22.1	0.638	1
PTEN	Del_21q22.2	0.638	1
Amp_1q22	Del_21q22.2	0.638	1
Del_5q13.2	Del_21q22.3	0.638	1
ATM	MLL2	0.64	1
FOXA1	MLL2	0.64	1
MLL2	Del_6p25.1	0.64	1
TP53	Amp_3q21.3	0.641	1
Amp_3q21.3	Del_17p13.1	0.641	1
Amp_7q22.1	Del_17p13.1	0.641	1
8q-Amp	Del_12p13.1	0.642	1
MED12	Del_10q23.31	0.643	1
Amp_20q13.2	Del_10q23.31	0.643	1
Del_6p25.1	Del_12p13.1	0.644	1
AKT1	Del_18q21.31	0.645	1
IDH1	Del_18q21.31	0.645	1
Amp_Xp22.11	Del_1q42.3	0.645	1
Amp_11q13.2	Del_1p22.1	0.646	1
Del_3p13	Del_11p11.2	0.647	1
HRAS	Del_3p13	0.648	1
KDM6A	TP53	0.648	1
KLHL2	Del_3p13	0.648	1
MED12	TP53	0.648	1
PIK3CA	TP53	0.648	1
TP53	ZMYM3	0.648	1
TP53	3p-Amp	0.648	1
TP53	Amp_12q23.1	0.648	1
TP53	Amp_20q13.2	0.648	1
1q-Amp	Del_3p13	0.648	1
Xp-Del	Del_3p13	0.648	1
Xq-Del	Del_3p13	0.648	1
Amp_13q12.11	Del_3p13	0.648	1
Amp_15q11.2	Del_3p13	0.648	1
PTEN	Del_18q21.31	0.65	1
Amp_9q33.3	Del_2q22.3	0.65	1
KDM6A	Del_16q22.3	0.651	1
MED12	Del_16q22.3	0.651	1
PIK3CA	Del_16q22.3	0.651	1
Amp_20q13.2	Del_16q22.3	0.651	1
AKT1	Amp_8q24.21	0.652	1
AKT1	Del_5q11.2	0.652	1
IDH1	Amp_8q22.1	0.652	1
IDH1	Amp_8q24.21	0.652	1
IDH1	Del_5q11.2	0.652	1
MLL2	8p-Del	0.652	1
XPO5	Amp_8q22.1	0.652	1
XPO5	Amp_8q24.21	0.652	1
XPO5	Del_5q11.2	0.652	1
10p-Del	18q-Del	0.653	1
18q-Del	Amp_17q23.2	0.653	1
18q-Del	Amp_Xq25	0.653	1
BRAF	7q-Amp	0.654	1
BRAF	Amp_8p11.23	0.654	1
BRAF	Del_11q22.3	0.654	1
BRAF	Del_19q13.2	0.654	1
CTNNB1	Del_19q13.2	0.654	1
7q-Amp	Amp_Xq27.1	0.654	1
Amp_8p11.23	Amp_Xq27.1	0.654	1
Amp_14q21.1	Del_19q13.2	0.654	1
Amp_Xq27.1	Del_11q22.3	0.654	1
PTEN	12p-Del	0.656	1
PTEN	Del_9p23	0.656	1
12p-Del	Amp_1q22	0.656	1
12p-Del	Amp_16q11.2	0.656	1
Amp_1q22	Del_15q21.3	0.656	1
Amp_3q26.2	Del_10q23.31	0.656	1
Amp_8p11.23	Del_16q24.1	0.656	1
Del_6p25.1	Del_16q24.1	0.656	1
AKT1	Del_5q21.1	0.659	1
IDH1	Del_5q21.1	0.659	1
XPO5	Del_5q21.1	0.659	1
PTEN	Amp_8q22.1	0.66	1
PTEN	Amp_8q24.21	0.66	1
Amp_1q22	Del_21q22.3	0.66	1
Amp_7q22.1	Del_17q21.31	0.66	1
KDM6A	7p-Amp	0.661	1
KDM6A	17p-Del	0.661	1
MED12	7p-Amp	0.661	1
MED12	17p-Del	0.661	1
PIK3CA	7p-Amp	0.661	1
ZMYM3	7p-Amp	0.661	1
FOXA1	Del_8p21.3	0.662	1
7p-Amp	Del_11q23.2	0.662	1
17p-Del	Del_11q23.2	0.662	1
MLL2	8p-Amp	0.663	1
MLL2	Del_11p11.2	0.663	1
Amp_Xq27.1	Del_8p21.3	0.663	1
MLL2	Del_8p23.2	0.664	1
HRAS	Del_2q22.1	0.665	1
KLHL2	Del_2q22.1	0.665	1
22q-Del	Del_2q22.1	0.665	1
Amp_15q11.2	Del_2q22.1	0.665	1
AKT1	Del_18q23	0.666	1
IDH1	Del_18q23	0.666	1
XPO5	Del_18q23	0.666	1
TP53	7q-Amp	0.667	1
TP53	Amp_8p11.23	0.667	1
13q-Del	Del_12p13.1	0.667	1
Amp_3q21.3	Del_12p13.1	0.667	1
Amp_11q13.2	Del_6p25.1	0.667	1
ATM	16q-Del	0.668	1
8q-Amp	Del_6p25.1	0.668	1
BRAF	Del_21q22.2	0.671	1
CTNNB1	Del_21q22.2	0.671	1
KDM6A	Amp_7p14.3	0.674	1
MED12	Amp_7p14.3	0.674	1
PIK3CA	Amp_7p14.3	0.674	1
ZMYM3	Amp_7p14.3	0.674	1
18p-Del	Amp_Xp22.11	0.674	1
Amp_7p14.3	Amp_12q23.1	0.674	1
Amp_Xp22.11	Del_11q23.2	0.674	1
PTEN	Amp_9q33.3	0.675	1
PTEN	Del_1p22.1	0.675	1
PTEN	Del_4q28.2	0.675	1
PTEN	Del_12q24.32	0.675	1
Amp_1q22	Del_1p22.1	0.675	1
Amp_16q11.2	Del_1p22.1	0.675	1
Amp_16q11.2	Del_4q28.2	0.675	1
SPOP	13q-Del	0.676	1
10p-Del	Del_21q22.3	0.677	1
10q-Del	Del_16q24.1	0.677	1
Amp_4q13.3	Del_21q22.3	0.677	1
Amp_17q23.2	Del_16q24.1	0.677	1
Amp_Xp21.1	Del_21q22.3	0.677	1
Amp_Xq25	Del_16q24.1	0.677	1
Amp_3q26.2	Del_1p31.3	0.68	1
Amp_3q26.2	Del_1q42.3	0.68	1
MED12	8p-Del	0.681	1
PIK3CA	8p-Del	0.681	1
ZMYM3	8p-Del	0.681	1
6q-Del	Del_12p13.1	0.681	1
PTEN	Del_18q23	0.682	1
Amp_8q22.1	Del_15q21.3	0.682	1
Amp_8q24.21	Del_15q21.3	0.682	1
Del_5q11.2	Del_15q21.3	0.682	1
HRAS	8q-Amp	0.683	1
KLHL2	8q-Amp	0.683	1
KLHL2	16q-Del	0.683	1
1q-Amp	16q-Del	0.683	1
8q-Amp	Amp_15q11.2	0.683	1
16q-Del	22q-Del	0.683	1
18p-Del	Amp_7p14.3	0.683	1
Amp_7p14.3	Del_11q23.2	0.683	1
Amp_9q33.3	Del_10q23.31	0.683	1
ATM	Del_17p13.1	0.686	1
MLL2	3q-Amp	0.686	1
KDM6A	Del_1p31.3	0.687	1
KDM6A	Del_1q42.3	0.687	1
MED12	Del_1p31.3	0.687	1
MED12	Del_1q42.3	0.687	1
PIK3CA	Del_1q42.3	0.687	1
ZMYM3	Del_1p31.3	0.687	1
ZMYM3	Del_1q42.3	0.687	1
3p-Amp	Del_1p31.3	0.687	1
3p-Amp	Del_1q42.3	0.687	1
3q-Amp	Del_3p13	0.687	1
7p-Amp	Del_19q13.2	0.687	1
Amp_12q23.1	Del_1p31.3	0.687	1
Amp_12q23.1	Del_1q42.3	0.687	1
Amp_20q13.2	Del_1p31.3	0.687	1
Amp_20q13.2	Del_1q42.3	0.687	1
BRAF	12p-Del	0.688	1
BRAF	Del_9p23	0.688	1
BRAF	Del_15q21.3	0.688	1
CTNNB1	12p-Del	0.688	1
CTNNB1	Del_9p23	0.688	1
9q-Amp	Del_15q21.3	0.688	1
12p-Del	Amp_14q21.1	0.688	1
12p-Del	Amp_Xq27.1	0.688	1
Amp_8q24.21	Del_18q23	0.688	1
Amp_14q21.1	Del_9p23	0.688	1
Amp_14q21.1	Del_15q21.3	0.688	1
Amp_Xq27.1	Del_9p23	0.688	1
Amp_Xq27.1	Del_15q21.3	0.688	1
Del_1p22.1	Del_8p23.2	0.689	1
SMAD4	Del_8p21.3	0.69	1
XPO5	Del_8p21.3	0.69	1
7q-Amp	6q-Del	0.69	1
Amp_8p11.23	Amp_Xp22.11	0.69	1
Amp_Xp22.11	Del_11q22.3	0.69	1
HRAS	Del_13q14.13	0.692	1
HRAS	Del_2q22.3	0.693	1
KLHL2	Del_2q22.3	0.693	1
1q-Amp	Del_2q22.3	0.693	1
8p-Amp	Del_12p13.1	0.693	1
22q-Del	Del_2q22.3	0.693	1
Amp_15q11.2	Del_2q22.3	0.693	1
AKT1	Del_5q13.2	0.694	1
IDH1	Del_5q13.2	0.694	1
IDH1	Del_17q21.31	0.694	1
SMAD4	Del_17q21.31	0.694	1
TP53	Del_21q22.2	0.694	1
XPO5	Del_5q13.2	0.694	1
7q-Amp	Del_17q21.31	0.694	1
Amp_1q22	Del_6q14.3	0.694	1
Amp_3q26.2	Del_3p13	0.694	1
Amp_16q11.2	Del_6q14.3	0.694	1
Del_11q22.3	Del_17q21.31	0.694	1
Del_17q21.31	Del_19q13.2	0.694	1
ATM	PTEN	0.695	1
ATM	Amp_1q22	0.695	1
12p-Del	Del_5q21.1	0.695	1
Amp_1q22	Del_6p25.1	0.695	1
Amp_16q11.2	Del_6p25.1	0.695	1
Del_3p13	Del_18q21.31	0.695	1
Amp_7p14.3	Del_17p13.1	0.696	1
TP53	Amp_Xp21.1	0.697	1
TP53	Amp_Xq21.1	0.697	1
TP53	Amp_Xq25	0.697	1
10p-Del	Del_17p13.1	0.697	1
Amp_Xp21.1	Del_17p13.1	0.697	1
Amp_Xq21.1	Del_17p13.1	0.697	1
Amp_Xp22.11	Del_13q14.13	0.699	1
KDM6A	Amp_3q26.2	0.7	1
PIK3CA	Amp_3q26.2	0.7	1
ZMYM3	Amp_3q26.2	0.7	1
8q-Del	Amp_3q26.2	0.7	1
Amp_3q26.2	Amp_12q23.1	0.7	1
AKT1	SPOP	0.701	1
IDH1	SPOP	0.701	1
SPOP	XPO5	0.701	1
Amp_3q21.3	Del_10q23.31	0.701	1
Del_10q23.31	Del_11q23.2	0.701	1
Amp_17q23.2	Del_6q14.3	0.703	1
Amp_Xp21.1	Del_6q14.3	0.703	1
Amp_Xq25	Del_6q14.3	0.703	1
Amp_Xq27.1	Del_18q21.31	0.703	1
6q-Del	Del_21q22.2	0.705	1
Amp_Xp22.11	Del_21q22.2	0.705	1
BRAF	Amp_9q33.3	0.706	1
BRAF	Del_4q28.2	0.706	1
CTNNB1	Amp_9q33.3	0.706	1
CTNNB1	Del_1p22.1	0.706	1
CTNNB1	Del_4q28.2	0.706	1
CTNNB1	Del_12q24.32	0.706	1
9q-Amp	Del_12q24.32	0.706	1
18q-Del	Del_3p13	0.706	1
Amp_14q21.1	Del_1p22.1	0.706	1
Amp_14q21.1	Del_4q28.2	0.706	1
Amp_14q21.1	Del_12q24.32	0.706	1
Amp_Xq27.1	Del_4q28.2	0.706	1
Amp_Xq27.1	Del_12q24.32	0.706	1
Amp_7p14.3	Del_19q13.2	0.707	1
7p-Amp	10p-Del	0.708	1
7p-Amp	Amp_Xq21.1	0.708	1
7p-Amp	Amp_Xq25	0.708	1
Xp-Del	Del_8p23.2	0.708	1
Xq-Del	Del_8p23.2	0.708	1
Amp_8p11.23	Del_12p13.1	0.708	1
Amp_13q12.11	Del_8p23.2	0.708	1
Del_6q14.3	Del_17p13.1	0.708	1
SPOP	Del_11q22.3	0.709	1
KDM6A	Del_13q22.1	0.71	1
ZMYM3	Del_13q22.1	0.71	1
KLHL2	18q-Del	0.711	1
MLL2	Amp_11q13.2	0.711	1
18q-Del	Amp_13q12.11	0.711	1
18q-Del	Amp_15q11.2	0.711	1
BRAF	Amp_8q22.1	0.713	1
BRAF	Amp_8q24.21	0.713	1
MLL2	Del_2q22.1	0.713	1
7p-Amp	Del_21q22.2	0.713	1
Amp_8q22.1	Amp_Xq27.1	0.713	1
Amp_8q24.21	Amp_Xq27.1	0.713	1
Amp_14q21.1	Del_5q11.2	0.713	1
KDM6A	13q-Del	0.714	1
KDM6A	18p-Del	0.714	1
KDM6A	Amp_3q21.3	0.714	1
KDM6A	Amp_7q22.1	0.714	1
MED12	13q-Del	0.714	1
MED12	18p-Del	0.714	1
MED12	Amp_3q21.3	0.714	1
MED12	Amp_7q22.1	0.714	1
MED12	Del_11q23.2	0.714	1
PIK3CA	13q-Del	0.714	1
PIK3CA	Amp_3q21.3	0.714	1
PIK3CA	Amp_7q22.1	0.714	1
PIK3CA	Del_11q23.2	0.714	1
ZMYM3	13q-Del	0.714	1
ZMYM3	18p-Del	0.714	1
ZMYM3	Amp_3q21.3	0.714	1
ZMYM3	Amp_7q22.1	0.714	1
ZMYM3	Del_11q23.2	0.714	1
3p-Amp	18p-Del	0.714	1
3p-Amp	Del_11q23.2	0.714	1
18p-Del	Amp_20q13.2	0.714	1
18q-Del	Del_6p25.1	0.714	1
8q-Del	Amp_3q21.3	0.714	1
8q-Del	Amp_7q22.1	0.714	1
8q-Del	Del_11q23.2	0.714	1
Amp_7q22.1	Amp_12q23.1	0.714	1
Amp_20q13.2	Del_11q23.2	0.714	1
PTEN	8p-Amp	0.715	1
PTEN	Del_11p11.2	0.715	1
Amp_1q22	Del_11p11.2	0.715	1
Amp_16q11.2	Del_11p11.2	0.715	1
10p-Del	Amp_7p14.3	0.72	1
Amp_7p14.3	Amp_Xq21.1	0.72	1
Amp_7p14.3	Amp_Xq25	0.72	1
12p-Del	6q-Del	0.721	1
12p-Del	Amp_Xp22.11	0.721	1
6q-Del	Del_9p23	0.721	1
6q-Del	Del_15q21.3	0.721	1
Amp_Xp22.11	Del_9p23	0.721	1
Amp_Xp22.11	Del_15q21.3	0.721	1
IDH1	Del_3p13	0.722	1
SMAD4	Del_3p13	0.722	1
18q-Del	Amp_8q24.21	0.722	1
ATM	BRAF	0.724	1
ATM	CTNNB1	0.724	1
ATM	Amp_14q21.1	0.724	1
BRAF	FOXA1	0.724	1
BRAF	Del_6p25.1	0.724	1
CTNNB1	Del_6p25.1	0.724	1
FOXA1	Amp_Xq27.1	0.724	1
Amp_14q21.1	Del_6p25.1	0.724	1
18p-Del	Amp_3q26.2	0.725	1
Amp_1q22	Del_17q21.31	0.725	1
Del_1p31.3	Del_11q22.3	0.727	1
KDM6A	7q-Amp	0.728	1
KDM6A	Amp_8p11.23	0.728	1
KDM6A	Del_19q13.2	0.728	1
MED12	7q-Amp	0.728	1
MED12	Amp_8p11.23	0.728	1
MED12	Del_11q22.3	0.728	1
MED12	Del_19q13.2	0.728	1
PIK3CA	7q-Amp	0.728	1
PIK3CA	Del_11q22.3	0.728	1
ZMYM3	7q-Amp	0.728	1
ZMYM3	Amp_8p11.23	0.728	1
3p-Amp	Del_11q22.3	0.728	1
3p-Amp	Del_19q13.2	0.728	1
7q-Amp	Amp_12q23.1	0.728	1
8q-Del	Amp_8p11.23	0.728	1
8q-Del	Del_11q22.3	0.728	1
Amp_4q13.3	Del_10q23.31	0.728	1
Amp_8p11.23	Amp_12q23.1	0.728	1
Amp_12q23.1	Del_19q13.2	0.728	1
Amp_20q13.2	Del_11q22.3	0.728	1
Amp_Xp21.1	Del_10q23.31	0.728	1
Amp_8q22.1	Del_12p13.1	0.73	1
Amp_8q24.21	Del_12p13.1	0.73	1
Del_10q23.31	Del_16q22.3	0.731	1
BRAF	Del_18q23	0.732	1
CTNNB1	Del_18q23	0.732	1
CTNNB1	Del_21q22.3	0.732	1
10q-Del	Del_1q42.3	0.732	1
Amp_4q13.3	Del_1q42.3	0.732	1
Amp_7p14.3	Del_21q22.2	0.732	1
Amp_14q21.1	Del_16q24.1	0.732	1
Amp_17q23.2	Del_1p31.3	0.732	1
Amp_17q23.2	Del_1q42.3	0.732	1
Amp_Xp21.1	Del_1q42.3	0.732	1
Amp_Xq21.1	Del_1p31.3	0.732	1
Amp_Xq21.1	Del_1q42.3	0.732	1
Amp_Xq25	Del_1q42.3	0.732	1
Amp_Xq27.1	Del_18q23	0.732	1
12p-Del	Del_13q22.1	0.733	1
Amp_Xp21.1	Del_8p21.3	0.733	1
Amp_Xq21.1	Del_8p21.3	0.733	1
Amp_Xq25	Del_8p21.3	0.733	1
8q-Amp	Del_1q42.3	0.734	1
Amp_17q23.2	Del_16q22.3	0.734	1
Amp_8q22.1	Del_1p31.3	0.735	1
MLL2	PTEN	0.736	1
MLL2	Amp_1q22	0.736	1
PTEN	SPOP	0.736	1
PTEN	3q-Amp	0.736	1
SPOP	Amp_1q22	0.736	1
SPOP	Amp_16q11.2	0.736	1
8p-Del	Del_4q28.2	0.736	1
AKT1	Del_2q22.1	0.737	1
IDH1	Del_2q22.1	0.737	1
XPO5	Del_2q22.1	0.737	1
6q-Del	Del_12q24.32	0.738	1
Amp_Xp22.11	Del_1p22.1	0.738	1
Amp_Xp22.11	Del_4q28.2	0.738	1
MLL2	8q-Amp	0.739	1
MLL2	16q-Del	0.739	1
MLL2	Del_12p13.1	0.741	1
KDM6A	Del_21q22.2	0.742	1
MED12	Del_21q22.2	0.742	1
PIK3CA	Del_21q22.2	0.742	1
3p-Amp	Del_21q22.2	0.742	1
Amp_20q13.2	Del_21q22.2	0.742	1
BRAF	Del_11p11.2	0.743	1
CTNNB1	Del_11p11.2	0.743	1
8p-Amp	Amp_14q21.1	0.743	1
8p-Amp	Amp_Xq27.1	0.743	1
10p-Del	Amp_3q26.2	0.743	1
10q-Del	Amp_3q26.2	0.743	1
Amp_3q26.2	Amp_Xq21.1	0.743	1
Amp_3q26.2	Amp_Xq25	0.743	1
Amp_14q21.1	Del_11p11.2	0.743	1
Amp_Xq27.1	Del_11p11.2	0.743	1
13q-Del	Del_11q23.2	0.746	1
MED12	Del_12p13.1	0.747	1
Amp_3q26.2	Del_11q22.3	0.747	1
Amp_3q26.2	Del_19q13.2	0.747	1
TP53	Amp_9q33.3	0.748	1
TP53	Del_4q28.2	0.748	1
Del_6p25.1	Del_18q21.31	0.748	1
HRAS	TP53	0.749	1
KLHL2	TP53	0.749	1
TP53	1q-Amp	0.749	1
TP53	22q-Del	0.749	1
TP53	Xp-Del	0.749	1
TP53	Xq-Del	0.749	1
TP53	Amp_13q12.11	0.749	1
Del_1p31.3	Del_21q22.2	0.751	1
AKT1	8q-Amp	0.752	1
AKT1	16q-Del	0.752	1
IDH1	8q-Amp	0.752	1
IDH1	16q-Del	0.752	1
XPO5	8q-Amp	0.752	1
3q-Amp	Del_2q22.3	0.752	1
CTNNB1	Del_17p13.1	0.753	1
Amp_3q26.2	Del_18q21.31	0.753	1
Amp_14q21.1	Del_17p13.1	0.753	1
FOXA1	Amp_Xp22.11	0.754	1
Amp_Xp22.11	Del_6p25.1	0.754	1
10p-Del	13q-Del	0.755	1
10p-Del	18p-Del	0.755	1
10p-Del	Amp_3q21.3	0.755	1
10p-Del	Amp_7q22.1	0.755	1
10q-Del	18p-Del	0.755	1
10q-Del	Amp_3q21.3	0.755	1
10q-Del	Amp_7q22.1	0.755	1
10q-Del	Del_11q23.2	0.755	1
13q-Del	Amp_Xq25	0.755	1
18p-Del	Amp_4q13.3	0.755	1
18p-Del	Amp_17q23.2	0.755	1
18p-Del	Amp_Xp21.1	0.755	1
18p-Del	Amp_Xq21.1	0.755	1
18p-Del	Amp_Xq25	0.755	1
Amp_3q21.3	Amp_17q23.2	0.755	1
Amp_3q21.3	Amp_Xq21.1	0.755	1
Amp_3q21.3	Amp_Xq25	0.755	1
Amp_4q13.3	Del_11q23.2	0.755	1
Amp_7q22.1	Amp_Xq21.1	0.755	1
Amp_7q22.1	Amp_Xq25	0.755	1
Amp_17q23.2	Del_11q23.2	0.755	1
Amp_Xp21.1	Del_11q23.2	0.755	1
Amp_Xq21.1	Del_11q23.2	0.755	1
Amp_Xq25	Del_11q23.2	0.755	1
Del_2q22.1	Del_11q23.2	0.755	1
KDM6A	12p-Del	0.756	1
KDM6A	Del_9p23	0.756	1
KDM6A	Del_15q21.3	0.756	1
MED12	Del_9p23	0.756	1
MED12	Del_15q21.3	0.756	1
PIK3CA	Del_9p23	0.756	1
ZMYM3	12p-Del	0.756	1
ZMYM3	Del_9p23	0.756	1
3p-Amp	12p-Del	0.756	1
3p-Amp	Del_15q21.3	0.756	1
12p-Del	Amp_12q23.1	0.756	1
12p-Del	Amp_20q13.2	0.756	1
Amp_7p14.3	Del_15q21.3	0.756	1
Amp_8p11.23	Del_16q22.3	0.756	1
Amp_12q23.1	Del_9p23	0.756	1
PTEN	Amp_11q13.2	0.757	1
ATM	Del_5q11.2	0.759	1
HRAS	7p-Amp	0.759	1
HRAS	17p-Del	0.759	1
KLHL2	7p-Amp	0.759	1
KLHL2	17p-Del	0.759	1
1q-Amp	17p-Del	0.759	1
7p-Amp	22q-Del	0.759	1
7p-Amp	Amp_15q11.2	0.759	1
17p-Del	Xp-Del	0.759	1
17p-Del	Xq-Del	0.759	1
17p-Del	Amp_13q12.11	0.759	1
8p-Del	Amp_3q21.3	0.759	1
8p-Del	Amp_7q22.1	0.759	1
8p-Del	Amp_Xq25	0.759	1
AKT1	Del_2q22.3	0.76	1
BRAF	Del_6q14.3	0.76	1
CTNNB1	Del_6q14.3	0.76	1
IDH1	Del_2q22.3	0.76	1
SMAD4	Del_2q22.3	0.76	1
XPO5	Del_2q22.3	0.76	1
Del_5q13.2	Del_15q21.3	0.76	1
Del_9p23	Del_17q21.31	0.76	1
BRAF	MLL2	0.761	1
BRAF	3q-Amp	0.761	1
CTNNB1	MLL2	0.761	1
CTNNB1	3q-Amp	0.761	1
MLL2	9q-Amp	0.761	1
MLL2	Amp_Xq27.1	0.761	1
3q-Amp	9q-Amp	0.761	1
Del_2q22.3	Del_8p21.3	0.762	1
7p-Amp	Del_1p22.1	0.765	1
17p-Del	Del_17q21.31	0.765	1
Amp_Xp22.11	Del_5q11.2	0.766	1
7q-Amp	Del_11q23.2	0.767	1
8p-Del	Amp_1q22	0.767	1
Amp_3q21.3	Del_11q22.3	0.767	1
Amp_7q22.1	Del_11q22.3	0.767	1
Amp_7q22.1	Del_19q13.2	0.767	1
7q-Amp	10p-Del	0.768	1
7q-Amp	Amp_Xq21.1	0.768	1
7q-Amp	Amp_Xq25	0.768	1
10p-Del	Amp_8p11.23	0.768	1
10p-Del	Del_19q13.2	0.768	1
10q-Del	Amp_8p11.23	0.768	1
10q-Del	Del_11q22.3	0.768	1
10q-Del	Del_19q13.2	0.768	1
Amp_4q13.3	Del_11q22.3	0.768	1
Amp_4q13.3	Del_19q13.2	0.768	1
Amp_8p11.23	Amp_Xq21.1	0.768	1
Amp_8p11.23	Amp_Xq25	0.768	1
Amp_16q11.2	Del_3p13	0.768	1
Amp_Xp21.1	Del_11q22.3	0.768	1
Amp_Xq21.1	Del_11q22.3	0.768	1
Amp_Xq21.1	Del_19q13.2	0.768	1
Amp_Xq25	Del_11q22.3	0.768	1
HRAS	Amp_7p14.3	0.769	1
KLHL2	Amp_7p14.3	0.769	1
22q-Del	Amp_7p14.3	0.769	1
Amp_7p14.3	Amp_15q11.2	0.769	1
BRAF	Del_17q21.31	0.77	1
CTNNB1	Del_5q13.2	0.77	1
Amp_14q21.1	Del_5q13.2	0.77	1
Amp_Xq27.1	Del_5q13.2	0.77	1
ATM	Del_5q21.1	0.771	1
KDM6A	Amp_9q33.3	0.771	1
KDM6A	Del_1p22.1	0.771	1
KDM6A	Del_4q28.2	0.771	1
KDM6A	Del_12q24.32	0.771	1
MED12	Amp_9q33.3	0.771	1
MED12	Del_1p22.1	0.771	1
MED12	Del_4q28.2	0.771	1
MED12	Del_12q24.32	0.771	1
PIK3CA	Amp_9q33.3	0.771	1
PIK3CA	Del_4q28.2	0.771	1
ZMYM3	Amp_9q33.3	0.771	1
ZMYM3	Del_1p22.1	0.771	1
ZMYM3	Del_4q28.2	0.771	1
ZMYM3	Del_12q24.32	0.771	1
3p-Amp	Del_1p22.1	0.771	1
8q-Del	Amp_9q33.3	0.771	1
8q-Del	Del_1p22.1	0.771	1
8q-Del	Del_4q28.2	0.771	1
8q-Del	Del_12q24.32	0.771	1
Amp_9q33.3	Amp_12q23.1	0.771	1
Amp_12q23.1	Del_1p22.1	0.771	1
Amp_20q13.2	Del_4q28.2	0.771	1
Amp_Xp22.11	Del_11p11.2	0.771	1
Del_5q21.1	Del_6p25.1	0.771	1
MLL2	Del_16q24.1	0.772	1
Del_5q13.2	Del_10q23.31	0.773	1
KLHL2	Del_16q24.1	0.774	1
KLHL2	Del_21q22.3	0.774	1
12p-Del	Del_1p31.3	0.774	1
16q-Del	Amp_11q13.2	0.774	1
22q-Del	Del_16q24.1	0.774	1
Amp_13q12.11	Del_16q24.1	0.774	1
Amp_13q12.11	Del_21q22.3	0.774	1
Amp_15q11.2	Del_16q24.1	0.774	1
Del_1p31.3	Del_9p23	0.774	1
Del_3p13	Del_16q24.1	0.774	1
AKT1	18q-Del	0.775	1
IDH1	18q-Del	0.775	1
XPO5	18q-Del	0.775	1
Del_12q24.32	Del_13q22.1	0.776	1
PTEN	Amp_1q22	0.778	1
PTEN	Amp_16q11.2	0.778	1
3q-Amp	18q-Del	0.778	1
HRAS	Del_1q42.3	0.779	1
KLHL2	Del_1p31.3	0.779	1
1q-Amp	Del_1p31.3	0.779	1
Xp-Del	Del_1p31.3	0.779	1
Xp-Del	Del_1q42.3	0.779	1
Xq-Del	Del_1p31.3	0.779	1
Xq-Del	Del_1q42.3	0.779	1
Amp_13q12.11	Del_1p31.3	0.779	1
Amp_13q12.11	Del_1q42.3	0.779	1
Amp_15q11.2	Del_1p31.3	0.779	1
Amp_15q11.2	Del_1q42.3	0.779	1
Del_2q22.3	Del_10q23.31	0.779	1
CTNNB1	SPOP	0.78	1
SPOP	9q-Amp	0.78	1
SPOP	Amp_14q21.1	0.78	1
10p-Del	Del_21q22.2	0.78	1
Amp_4q13.3	Del_21q22.2	0.78	1
Amp_17q23.2	Del_21q22.2	0.78	1
Amp_Xp21.1	Del_21q22.2	0.78	1
Amp_Xq21.1	Del_21q22.2	0.78	1
Amp_Xq25	Del_21q22.2	0.78	1
BRAF	Amp_11q13.2	0.781	1
CTNNB1	Amp_11q13.2	0.781	1
9q-Amp	Amp_11q13.2	0.781	1
Amp_11q13.2	Amp_Xq27.1	0.781	1
Del_6p25.1	Del_18q23	0.781	1
Amp_Xq21.1	Del_13q22.1	0.783	1
Del_11q23.2	Del_18q21.31	0.784	1
ATM	KDM6A	0.785	1
ATM	MED12	0.785	1
ATM	PIK3CA	0.785	1
ATM	ZMYM3	0.785	1
ATM	3p-Amp	0.785	1
ATM	Amp_12q23.1	0.785	1
ATM	Amp_20q13.2	0.785	1
FOXA1	KDM6A	0.785	1
FOXA1	MED12	0.785	1
FOXA1	PIK3CA	0.785	1
FOXA1	ZMYM3	0.785	1
FOXA1	8q-Del	0.785	1
KDM6A	Del_6p25.1	0.785	1
MED12	Del_6p25.1	0.785	1
PIK3CA	Del_6p25.1	0.785	1
ZMYM3	Del_6p25.1	0.785	1
8q-Amp	18p-Del	0.785	1
Amp_12q23.1	Del_6p25.1	0.785	1
7q-Amp	Del_19q13.2	0.786	1
Amp_11q13.2	Del_2q22.3	0.786	1
Del_11q22.3	Del_19q13.2	0.786	1
KDM6A	Del_13q14.13	0.787	1
MLL2	6q-Del	0.788	1
MLL2	Amp_Xp22.11	0.788	1
9q-Amp	Del_10q23.31	0.788	1
Amp_14q21.1	Del_10q23.31	0.788	1
Amp_16q11.2	Del_2q22.1	0.788	1
Del_11q23.2	Del_21q22.2	0.788	1
HRAS	Amp_3q26.2	0.789	1
HRAS	Del_17p13.1	0.789	1
KLHL2	Amp_3q26.2	0.789	1
KLHL2	Del_17p13.1	0.789	1
1q-Amp	Amp_3q26.2	0.789	1
22q-Del	Amp_3q26.2	0.789	1
Xp-Del	Amp_3q26.2	0.789	1
Xp-Del	Del_17p13.1	0.789	1
Xq-Del	Amp_3q26.2	0.789	1
Xq-Del	Del_17p13.1	0.789	1
Amp_3q26.2	Amp_15q11.2	0.789	1
Amp_13q12.11	Del_17p13.1	0.789	1
FOXA1	17p-Del	0.79	1
12p-Del	Amp_3q26.2	0.791	1
Amp_3q26.2	Del_9p23	0.791	1
10p-Del	Del_9p23	0.792	1
10p-Del	Del_15q21.3	0.792	1
10q-Del	12p-Del	0.792	1
10q-Del	Del_15q21.3	0.792	1
12p-Del	Amp_4q13.3	0.792	1
12p-Del	Amp_17q23.2	0.792	1
12p-Del	Amp_Xp21.1	0.792	1
12p-Del	Amp_Xq21.1	0.792	1
13q-Del	Del_21q22.3	0.792	1
Amp_3q26.2	Del_18q23	0.792	1
Amp_4q13.3	Del_15q21.3	0.792	1
Amp_Xp21.1	Del_9p23	0.792	1
Amp_Xp21.1	Del_15q21.3	0.792	1
Amp_Xq21.1	Del_15q21.3	0.792	1
Amp_Xq25	Del_9p23	0.792	1
Amp_Xq25	Del_15q21.3	0.792	1
Amp_9q33.3	Del_17q21.31	0.793	1
HRAS	Del_6q14.3	0.794	1
TP53	Del_13q22.1	0.794	1
22q-Del	Del_6q14.3	0.794	1
Amp_13q12.11	Del_6q14.3	0.794	1
Del_6q14.3	Del_9p23	0.794	1
MLL2	Del_17p13.1	0.795	1
Amp_1q22	Del_8p21.3	0.795	1
7q-Amp	8p-Del	0.797	1
8p-Del	Del_11q22.3	0.797	1
Amp_9q33.3	Del_1q42.3	0.797	1
Del_1p31.3	Del_4q28.2	0.797	1
Del_1q42.3	Del_4q28.2	0.797	1
Del_2q22.1	Del_18q23	0.798	1
HRAS	13q-Del	0.799	1
HRAS	Amp_3q21.3	0.799	1
HRAS	Amp_7q22.1	0.799	1
HRAS	Del_11q23.2	0.799	1
KLHL2	18p-Del	0.799	1
KLHL2	Amp_3q21.3	0.799	1
KLHL2	Amp_7q22.1	0.799	1
KLHL2	Del_11q23.2	0.799	1
SPOP	Amp_8q22.1	0.799	1
SPOP	Amp_8q24.21	0.799	1
1q-Amp	13q-Del	0.799	1
1q-Amp	18p-Del	0.799	1
1q-Amp	Amp_7q22.1	0.799	1
13q-Del	22q-Del	0.799	1
13q-Del	Amp_15q11.2	0.799	1
18p-Del	Xp-Del	0.799	1
18p-Del	Xq-Del	0.799	1
18p-Del	Amp_13q12.11	0.799	1
18p-Del	Amp_15q11.2	0.799	1
22q-Del	Amp_3q21.3	0.799	1
22q-Del	Amp_7q22.1	0.799	1
22q-Del	Del_11q23.2	0.799	1
Xp-Del	Amp_3q21.3	0.799	1
Xq-Del	Amp_3q21.3	0.799	1
Amp_3q21.3	Amp_15q11.2	0.799	1
Amp_7q22.1	Amp_15q11.2	0.799	1
Amp_13q12.11	Del_11q23.2	0.799	1
Amp_15q11.2	Del_11q23.2	0.799	1
KDM6A	8p-Amp	0.8	1
KDM6A	Del_11p11.2	0.8	1
MED12	8p-Amp	0.8	1
MED12	Del_11p11.2	0.8	1
PIK3CA	Del_11p11.2	0.8	1
ZMYM3	8p-Amp	0.8	1
ZMYM3	Del_11p11.2	0.8	1
8p-Amp	8q-Del	0.8	1
8p-Amp	Amp_12q23.1	0.8	1
8p-Amp	Amp_20q13.2	0.8	1
8q-Del	Del_11p11.2	0.8	1
Amp_3q21.3	Del_2q22.3	0.8	1
Amp_12q23.1	Del_11p11.2	0.8	1
BRAF	PTEN	0.801	1
BRAF	Amp_1q22	0.801	1
BRAF	Amp_16q11.2	0.801	1
CTNNB1	Amp_16q11.2	0.801	1
PTEN	9q-Amp	0.801	1
PTEN	Amp_14q21.1	0.801	1
PTEN	Amp_Xq27.1	0.801	1
9q-Amp	Amp_1q22	0.801	1
6q-Del	Del_16q24.1	0.801	1
Amp_1q22	Amp_Xq27.1	0.801	1
Amp_16q11.2	Amp_Xq27.1	0.801	1
Amp_Xp22.11	Del_16q24.1	0.801	1
TP53	Del_11p11.2	0.802	1
MLL2	Del_6q14.3	0.803	1
3p-Amp	Del_8p23.2	0.803	1
10p-Del	Amp_9q33.3	0.805	1
10q-Del	Amp_9q33.3	0.805	1
10q-Del	Del_4q28.2	0.805	1
Amp_4q13.3	Del_1p22.1	0.805	1
Amp_4q13.3	Del_4q28.2	0.805	1
Amp_4q13.3	Del_12q24.32	0.805	1
Amp_9q33.3	Amp_Xq21.1	0.805	1
Amp_17q23.2	Del_4q28.2	0.805	1
Amp_17q23.2	Del_12q24.32	0.805	1
Amp_Xp21.1	Del_1p22.1	0.805	1
Amp_Xp21.1	Del_4q28.2	0.805	1
Amp_Xq21.1	Del_1p22.1	0.805	1
Amp_Xq21.1	Del_4q28.2	0.805	1
Amp_Xq21.1	Del_12q24.32	0.805	1
Amp_Xq25	Del_4q28.2	0.805	1
AKT1	TP53	0.806	1
IDH1	TP53	0.806	1
TP53	XPO5	0.806	1
7q-Amp	Del_21q22.2	0.806	1
6q-Del	Amp_11q13.2	0.806	1
BRAF	Del_3p13	0.807	1
12p-Del	13q-Del	0.808	1
12p-Del	Amp_3q21.3	0.808	1
Amp_3q21.3	Del_9p23	0.808	1
Del_5q21.1	Del_11q23.2	0.808	1
Del_11q23.2	Del_15q21.3	0.808	1
16q-Del	Amp_1q22	0.809	1
18q-Del	Amp_11q13.2	0.809	1
HRAS	7q-Amp	0.81	1
HRAS	Amp_8p11.23	0.81	1
HRAS	Del_11q22.3	0.81	1
HRAS	Del_19q13.2	0.81	1
KLHL2	7q-Amp	0.81	1
KLHL2	Amp_8p11.23	0.81	1
KLHL2	Del_11q22.3	0.81	1
KLHL2	Del_19q13.2	0.81	1
1q-Amp	Del_19q13.2	0.81	1
7q-Amp	22q-Del	0.81	1
7q-Amp	Amp_15q11.2	0.81	1
12p-Del	Del_3p13	0.81	1
16q-Del	Amp_8p11.23	0.81	1
Xp-Del	Del_19q13.2	0.81	1
Xq-Del	Del_19q13.2	0.81	1
Amp_8p11.23	Amp_15q11.2	0.81	1
Amp_13q12.11	Del_19q13.2	0.81	1
Amp_15q11.2	Del_19q13.2	0.81	1
8p-Del	Amp_7p14.3	0.812	1
Amp_Xq21.1	Del_12p13.1	0.812	1
Amp_Xq25	Del_12p13.1	0.812	1
AKT1	Del_13q14.13	0.813	1
HRAS	Del_10q23.31	0.813	1
KLHL2	Del_10q23.31	0.813	1
1q-Amp	Del_10q23.31	0.813	1
Amp_13q12.11	Del_10q23.31	0.813	1
Amp_15q11.2	Del_10q23.31	0.813	1
AKT1	17p-Del	0.814	1
IDH1	7p-Amp	0.814	1
IDH1	17p-Del	0.814	1
XPO5	7p-Amp	0.814	1
XPO5	17p-Del	0.814	1
7p-Amp	Del_17p13.1	0.815	1
17p-Del	Del_11p11.2	0.815	1
6q-Del	Del_5q13.2	0.815	1
6q-Del	Del_17q21.31	0.815	1
KDM6A	MLL2	0.816	1
KDM6A	3q-Amp	0.816	1
MED12	MLL2	0.816	1
MLL2	PIK3CA	0.816	1
MLL2	3p-Amp	0.816	1
MLL2	8q-Del	0.816	1
MLL2	Amp_12q23.1	0.816	1
MLL2	Amp_20q13.2	0.816	1
PIK3CA	3q-Amp	0.816	1
ZMYM3	3q-Amp	0.816	1
3q-Amp	8q-Del	0.816	1
3q-Amp	Amp_12q23.1	0.816	1
KLHL2	Del_16q22.3	0.817	1
Amp_13q12.11	Del_16q22.3	0.817	1
Amp_15q11.2	Del_16q22.3	0.817	1
ATM	Amp_4q13.3	0.818	1
ATM	Amp_17q23.2	0.818	1
ATM	Amp_Xq25	0.818	1
FOXA1	10q-Del	0.818	1
FOXA1	Amp_17q23.2	0.818	1
FOXA1	Amp_Xp21.1	0.818	1
FOXA1	Amp_Xq21.1	0.818	1
FOXA1	Amp_Xq25	0.818	1
KDM6A	Del_5q11.2	0.818	1
Amp_4q13.3	Del_6p25.1	0.818	1
Amp_Xp21.1	Del_6p25.1	0.818	1
Amp_Xq21.1	Del_6p25.1	0.818	1
Amp_1q22	Del_2q22.3	0.819	1
Del_11q23.2	Del_17p13.1	0.819	1
ATM	Del_1p31.3	0.82	1
FOXA1	Del_1q42.3	0.82	1
HRAS	Del_21q22.2	0.82	1
KLHL2	Del_21q22.2	0.82	1
1q-Amp	Del_21q22.2	0.82	1
Xp-Del	Del_21q22.2	0.82	1
Xq-Del	Del_21q22.2	0.82	1
Amp_3q21.3	Del_18q23	0.82	1
Amp_7q22.1	Del_18q23	0.82	1
Amp_15q11.2	Del_21q22.2	0.82	1
Del_11q23.2	Del_18q23	0.82	1
AKT1	Amp_7p14.3	0.821	1
BRAF	9q-Amp	0.821	1
BRAF	8p-Del	0.821	1
BRAF	Amp_14q21.1	0.821	1
BRAF	Amp_Xq27.1	0.821	1
CTNNB1	9q-Amp	0.821	1
CTNNB1	8p-Del	0.821	1
CTNNB1	Amp_14q21.1	0.821	1
CTNNB1	Amp_Xq27.1	0.821	1
IDH1	Amp_7p14.3	0.821	1
SMAD4	Amp_7p14.3	0.821	1
XPO5	Amp_7p14.3	0.821	1
9q-Amp	Amp_14q21.1	0.821	1
8p-Del	Amp_Xq27.1	0.821	1
Amp_14q21.1	Amp_Xq27.1	0.821	1
Amp_7q22.1	Del_8p23.2	0.822	1
SPOP	6q-Del	0.823	1
17p-Del	Del_3p13	0.823	1
Del_2q22.3	Del_11q22.3	0.823	1
Del_2q22.3	Del_19q13.2	0.823	1
ATM	Del_5q13.2	0.824	1
MLL2	Del_18q21.31	0.824	1
PTEN	6q-Del	0.824	1
PTEN	Amp_Xp22.11	0.824	1
SMAD4	Del_8p23.2	0.824	1
XPO5	Del_8p23.2	0.824	1
8q-Amp	Del_5q21.1	0.824	1
6q-Del	Amp_1q22	0.824	1
6q-Del	Amp_16q11.2	0.824	1
Del_5q13.2	Del_6p25.1	0.824	1
BRAF	Del_2q22.1	0.825	1
12p-Del	Del_19q13.2	0.825	1
8p-Del	Del_11p11.2	0.825	1
Amp_8p11.23	Del_15q21.3	0.825	1
Amp_8q24.21	Del_19q13.2	0.825	1
TP53	Amp_8q22.1	0.826	1
TP53	Amp_8q24.21	0.826	1
TP53	Del_5q11.2	0.826	1
8q-Amp	Del_13q14.13	0.826	1
13q-Del	Del_1p22.1	0.828	1
13q-Del	Del_4q28.2	0.828	1
13q-Del	Del_12q24.32	0.828	1
18q-Del	Amp_3q21.3	0.828	1
18q-Del	Amp_7q22.1	0.828	1
Amp_7q22.1	Del_1p22.1	0.828	1
Del_1p22.1	Del_11q23.2	0.828	1
Del_4q28.2	Del_11q23.2	0.828	1
Del_11q23.2	Del_12q24.32	0.828	1
AKT1	Del_1q42.3	0.829	1
IDH1	Del_1p31.3	0.829	1
IDH1	Del_1q42.3	0.829	1
SMAD4	Del_1p31.3	0.829	1
SMAD4	Del_1q42.3	0.829	1
XPO5	Del_1p31.3	0.829	1
XPO5	Del_1q42.3	0.829	1
Del_10q23.31	Del_16q24.1	0.829	1
HRAS	12p-Del	0.83	1
KLHL2	12p-Del	0.83	1
KLHL2	Del_9p23	0.83	1
KLHL2	Del_15q21.3	0.83	1
1q-Amp	12p-Del	0.83	1
1q-Amp	Del_15q21.3	0.83	1
12p-Del	Amp_13q12.11	0.83	1
12p-Del	Amp_15q11.2	0.83	1
Xp-Del	Del_9p23	0.83	1
Xq-Del	Del_9p23	0.83	1
Amp_13q12.11	Del_9p23	0.83	1
Amp_13q12.11	Del_15q21.3	0.83	1
Amp_15q11.2	Del_9p23	0.83	1
KDM6A	Amp_11q13.2	0.831	1
MED12	Amp_11q13.2	0.831	1
PIK3CA	Del_18q23	0.831	1
ZMYM3	Amp_11q13.2	0.831	1
8p-Amp	10p-Del	0.831	1
8p-Amp	10q-Del	0.831	1
8p-Amp	Amp_17q23.2	0.831	1
8p-Amp	Amp_Xp21.1	0.831	1
8p-Amp	Amp_Xq21.1	0.831	1
8p-Amp	Amp_Xq25	0.831	1
8q-Del	Amp_11q13.2	0.831	1
Amp_7p14.3	Del_8p23.2	0.831	1
Amp_8q24.21	Del_2q22.3	0.831	1
Amp_12q23.1	Del_18q23	0.831	1
Amp_17q23.2	Del_11p11.2	0.831	1
Amp_20q13.2	Del_18q23	0.831	1
Amp_Xp21.1	Del_11p11.2	0.831	1
Amp_Xq21.1	Del_11p11.2	0.831	1
Amp_Xq25	Del_11p11.2	0.831	1
Del_6q14.3	Del_18q23	0.832	1
Del_19q13.2	Del_21q22.3	0.832	1
MLL2	Amp_8q22.1	0.833	1
MLL2	Amp_8q24.21	0.833	1
16q-Del	Del_21q22.2	0.833	1
8p-Del	Del_21q22.2	0.833	1
ATM	SPOP	0.834	1
PTEN	Del_12p13.1	0.834	1
KLHL2	8p-Del	0.836	1
8p-Del	Xp-Del	0.836	1
8p-Del	Xq-Del	0.836	1
8p-Del	Amp_13q12.11	0.836	1
Amp_9q33.3	Del_6q14.3	0.836	1
Del_5q21.1	Del_19q13.2	0.836	1
AKT1	Amp_3q26.2	0.837	1
IDH1	Amp_3q26.2	0.837	1
SMAD4	Amp_3q26.2	0.837	1
XPO5	Amp_3q26.2	0.837	1
PTEN	18q-Del	0.839	1
Del_12q24.32	Del_13q14.13	0.839	1
MLL2	7p-Amp	0.84	1
MLL2	17p-Del	0.84	1
8p-Del	Del_2q22.3	0.84	1
HRAS	Amp_9q33.3	0.841	1
HRAS	Del_1p22.1	0.841	1
HRAS	Del_4q28.2	0.841	1
HRAS	Del_12q24.32	0.841	1
KLHL2	Amp_9q33.3	0.841	1
KLHL2	Del_1p22.1	0.841	1
KLHL2	Del_4q28.2	0.841	1
KLHL2	Del_12q24.32	0.841	1
MLL2	Del_5q21.1	0.841	1
1q-Amp	Amp_9q33.3	0.841	1
1q-Amp	Del_1p22.1	0.841	1
22q-Del	Del_4q28.2	0.841	1
22q-Del	Del_12q24.32	0.841	1
Xp-Del	Del_1p22.1	0.841	1
Xp-Del	Del_12q24.32	0.841	1
Xq-Del	Del_1p22.1	0.841	1
Xq-Del	Del_12q24.32	0.841	1
Amp_9q33.3	Amp_15q11.2	0.841	1
Amp_13q12.11	Del_1p22.1	0.841	1
Amp_13q12.11	Del_12q24.32	0.841	1
Amp_15q11.2	Del_1p22.1	0.841	1
Amp_15q11.2	Del_4q28.2	0.841	1
Amp_15q11.2	Del_12q24.32	0.841	1
BRAF	6q-Del	0.842	1
CTNNB1	6q-Del	0.842	1
CTNNB1	Amp_Xp22.11	0.842	1
8p-Amp	Del_1p31.3	0.842	1
6q-Del	Amp_14q21.1	0.842	1
Amp_Xp22.11	Amp_Xq27.1	0.842	1
Del_15q21.3	Del_21q22.2	0.842	1
BRAF	8q-Amp	0.843	1
BRAF	16q-Del	0.843	1
Del_18q21.31	Del_21q22.2	0.843	1
MLL2	10p-Del	0.844	1
MLL2	10q-Del	0.844	1
MLL2	Amp_4q13.3	0.844	1
MLL2	Amp_Xq21.1	0.844	1
MLL2	Amp_Xq25	0.844	1
3q-Amp	10p-Del	0.844	1
3q-Amp	10q-Del	0.844	1
3q-Amp	Amp_Xq21.1	0.844	1
3q-Amp	Amp_Xq25	0.844	1
7q-Amp	Del_1p22.1	0.844	1
Amp_8p11.23	Del_12q24.32	0.844	1
Del_11q22.3	Del_12q24.32	0.844	1
Del_12q24.32	Del_19q13.2	0.844	1
Del_2q22.3	Del_21q22.2	0.845	1
AKT1	13q-Del	0.846	1
AKT1	18p-Del	0.846	1
AKT1	Amp_3q21.3	0.846	1
AKT1	Del_11q23.2	0.846	1
IDH1	13q-Del	0.846	1
IDH1	18p-Del	0.846	1
IDH1	Amp_3q21.3	0.846	1
IDH1	Amp_7q22.1	0.846	1
IDH1	Del_11q23.2	0.846	1
SMAD4	18p-Del	0.846	1
SMAD4	Amp_3q21.3	0.846	1
XPO5	18p-Del	0.846	1
XPO5	Amp_3q21.3	0.846	1
XPO5	Amp_7q22.1	0.846	1
7q-Amp	Del_18q23	0.846	1
6q-Del	Del_3p13	0.846	1
6q-Del	Del_10q23.31	0.846	1
Amp_Xp22.11	Del_10q23.31	0.846	1
Del_11q22.3	Del_18q23	0.846	1
KDM6A	Amp_1q22	0.847	1
KDM6A	Amp_16q11.2	0.847	1
MED12	PTEN	0.847	1
MED12	Amp_1q22	0.847	1
MED12	Amp_16q11.2	0.847	1
PIK3CA	PTEN	0.847	1
PIK3CA	Amp_1q22	0.847	1
PTEN	3p-Amp	0.847	1
PTEN	8q-Del	0.847	1
PTEN	Amp_12q23.1	0.847	1
PTEN	Amp_20q13.2	0.847	1
ZMYM3	Amp_1q22	0.847	1
8q-Del	Amp_1q22	0.847	1
8q-Del	Amp_16q11.2	0.847	1
ATM	Del_11q23.2	0.848	1
TP53	Del_1p31.3	0.848	1
TP53	Del_1q42.3	0.848	1
TP53	Del_13q14.13	0.848	1
Amp_3q21.3	Del_6p25.1	0.848	1
Amp_7q22.1	Del_6p25.1	0.848	1
Amp_Xq27.1	Del_13q14.13	0.848	1
Del_6p25.1	Del_11q23.2	0.848	1
MLL2	Del_18q23	0.849	1
7q-Amp	18q-Del	0.849	1
18q-Del	Del_11q22.3	0.849	1
Amp_11q13.2	Del_6q14.3	0.851	1
ATM	HRAS	0.852	1
ATM	KLHL2	0.852	1
ATM	Amp_13q12.11	0.852	1
ATM	Amp_15q11.2	0.852	1
FOXA1	HRAS	0.852	1
FOXA1	1q-Amp	0.852	1
FOXA1	22q-Del	0.852	1
FOXA1	Amp_15q11.2	0.852	1
HRAS	Del_6p25.1	0.852	1
KLHL2	Del_6p25.1	0.852	1
1q-Amp	Del_6p25.1	0.852	1
8q-Amp	Del_2q22.1	0.852	1
9q-Amp	Del_2q22.3	0.852	1
Xp-Del	Del_6p25.1	0.852	1
Xq-Del	Del_6p25.1	0.852	1
Amp_15q11.2	Del_6p25.1	0.852	1
KLHL2	Del_13q22.1	0.853	1
Amp_15q11.2	Del_13q22.1	0.853	1
AKT1	Amp_8p11.23	0.854	1
AKT1	Del_11q22.3	0.854	1
IDH1	7q-Amp	0.854	1
IDH1	Amp_8p11.23	0.854	1
IDH1	Del_11q22.3	0.854	1
IDH1	Del_19q13.2	0.854	1
SMAD4	Amp_8p11.23	0.854	1
SMAD4	Del_19q13.2	0.854	1
XPO5	7q-Amp	0.854	1
XPO5	Amp_8p11.23	0.854	1
XPO5	Del_11q22.3	0.854	1
XPO5	Del_19q13.2	0.854	1
Del_1q42.3	Del_16q24.1	0.854	1
HRAS	Del_8p21.3	0.855	1
KLHL2	Del_8p21.3	0.855	1
7q-Amp	Del_17p13.1	0.855	1
8p-Amp	Amp_3q26.2	0.855	1
Xp-Del	Del_8p21.3	0.855	1
Xq-Del	Del_8p21.3	0.855	1
Amp_8p11.23	Del_17p13.1	0.855	1
Amp_13q12.11	Del_8p21.3	0.855	1
Amp_15q11.2	Del_8p21.3	0.855	1
Del_11q22.3	Del_17p13.1	0.855	1
FOXA1	Del_12p13.1	0.856	1
8q-Amp	12p-Del	0.856	1
12p-Del	16q-Del	0.856	1
16q-Del	Del_9p23	0.856	1
10p-Del	Amp_11q13.2	0.857	1
10q-Del	Amp_11q13.2	0.857	1
Amp_11q13.2	Amp_Xq21.1	0.857	1
Amp_11q13.2	Amp_Xq25	0.857	1
KDM6A	Del_5q13.2	0.858	1
PIK3CA	Del_5q13.2	0.858	1
PIK3CA	Del_17q21.31	0.858	1
TP53	8q-Amp	0.858	1
8q-Del	Del_5q13.2	0.858	1
Amp_9q33.3	Del_2q22.1	0.858	1
Amp_11q13.2	Del_18q21.31	0.859	1
Del_4q28.2	Del_8p23.2	0.859	1
6q-Del	Amp_Xp22.11	0.86	1
ZMYM3	Del_8p21.3	0.861	1
AKT1	Del_21q22.2	0.862	1
ATM	Amp_8p11.23	0.862	1
ATM	Del_11q22.3	0.862	1
ATM	Del_19q13.2	0.862	1
BRAF	Del_8p23.2	0.862	1
CTNNB1	Del_8p23.2	0.862	1
FOXA1	Amp_8p11.23	0.862	1
FOXA1	Del_11q22.3	0.862	1
HRAS	8p-Amp	0.862	1
HRAS	Del_11p11.2	0.862	1
IDH1	Del_21q22.2	0.862	1
KLHL2	8p-Amp	0.862	1
KLHL2	Del_11p11.2	0.862	1
SMAD4	Del_21q22.2	0.862	1
XPO5	Del_21q22.2	0.862	1
1q-Amp	Del_11p11.2	0.862	1
7p-Amp	Del_1p31.3	0.862	1
7q-Amp	Del_8p23.2	0.862	1
8p-Amp	22q-Del	0.862	1
8p-Amp	Amp_15q11.2	0.862	1
10q-Del	Del_18q21.31	0.862	1
22q-Del	Del_11p11.2	0.862	1
Amp_15q11.2	Del_11p11.2	0.862	1
Amp_17q23.2	Del_18q21.31	0.862	1
Amp_Xp21.1	Del_18q21.31	0.862	1
Amp_Xq21.1	Del_18q21.31	0.862	1
Amp_Xq25	Del_18q21.31	0.862	1
Del_6p25.1	Del_11q22.3	0.862	1
Del_6p25.1	Del_19q13.2	0.862	1
Del_8p23.2	Del_19q13.2	0.862	1
BRAF	KDM6A	0.863	1
BRAF	MED12	0.863	1
BRAF	PIK3CA	0.863	1
BRAF	ZMYM3	0.863	1
BRAF	3p-Amp	0.863	1
BRAF	8q-Del	0.863	1
BRAF	Amp_12q23.1	0.863	1
BRAF	Amp_20q13.2	0.863	1
CTNNB1	MED12	0.863	1
CTNNB1	PIK3CA	0.863	1
CTNNB1	ZMYM3	0.863	1
CTNNB1	3p-Amp	0.863	1
CTNNB1	8q-Del	0.863	1
CTNNB1	Amp_12q23.1	0.863	1
CTNNB1	Amp_20q13.2	0.863	1
KDM6A	9q-Amp	0.863	1
KDM6A	Amp_14q21.1	0.863	1
MED12	9q-Amp	0.863	1
MED12	Amp_14q21.1	0.863	1
MLL2	Del_1q42.3	0.863	1
PIK3CA	9q-Amp	0.863	1
PIK3CA	Amp_14q21.1	0.863	1
PIK3CA	Amp_Xq27.1	0.863	1
ZMYM3	9q-Amp	0.863	1
ZMYM3	Amp_14q21.1	0.863	1
ZMYM3	Amp_Xq27.1	0.863	1
3p-Amp	9q-Amp	0.863	1
3p-Amp	Amp_14q21.1	0.863	1
3q-Amp	Del_1p31.3	0.863	1
9q-Amp	8q-Del	0.863	1
9q-Amp	Amp_12q23.1	0.863	1
13q-Del	Del_5q13.2	0.863	1
13q-Del	Del_17q21.31	0.863	1
18p-Del	Del_17q21.31	0.863	1
8q-Del	Amp_14q21.1	0.863	1
8q-Del	Amp_Xq27.1	0.863	1
Amp_12q23.1	Amp_Xq27.1	0.863	1
Amp_14q21.1	Amp_20q13.2	0.863	1
Del_3p13	Del_6p25.1	0.863	1
Del_5q13.2	Del_11q23.2	0.863	1
KDM6A	SPOP	0.864	1
SPOP	Amp_12q23.1	0.864	1
SPOP	Amp_20q13.2	0.864	1
ZMYM3	Del_16q24.1	0.864	1
ZMYM3	Del_21q22.3	0.864	1
3p-Amp	Del_16q24.1	0.864	1
3q-Amp	8p-Del	0.864	1
Del_1q42.3	Del_3p13	0.864	1
Amp_11q13.2	Del_5q11.2	0.866	1
8p-Amp	18p-Del	0.867	1
8p-Amp	Del_11q23.2	0.867	1
16q-Del	Del_10q23.31	0.867	1
18p-Del	Del_11p11.2	0.867	1
Amp_Xp21.1	Del_13q14.13	0.867	1
Del_11p11.2	Del_11q23.2	0.867	1
CTNNB1	18q-Del	0.868	1
SMAD4	Del_21q22.3	0.868	1
9q-Amp	18q-Del	0.868	1
Amp_8q22.1	Amp_Xq25	0.868	1
Amp_8q24.21	Amp_Xp21.1	0.868	1
Amp_8q24.21	Amp_Xq25	0.868	1
Amp_17q23.2	Del_5q11.2	0.868	1
Amp_Xp21.1	Del_5q11.2	0.868	1
18q-Del	Del_21q22.2	0.869	1
Amp_3q21.3	Del_16q22.3	0.869	1
AKT1	12p-Del	0.87	1
AKT1	Del_9p23	0.87	1
AKT1	Del_15q21.3	0.87	1
IDH1	12p-Del	0.87	1
IDH1	Del_9p23	0.87	1
IDH1	Del_15q21.3	0.87	1
SMAD4	12p-Del	0.87	1
SMAD4	Del_9p23	0.87	1
XPO5	12p-Del	0.87	1
XPO5	Del_15q21.3	0.87	1
12p-Del	Del_18q21.31	0.87	1
BRAF	Del_8p21.3	0.871	1
PTEN	10p-Del	0.871	1
PTEN	10q-Del	0.871	1
PTEN	Amp_4q13.3	0.871	1
PTEN	Amp_17q23.2	0.871	1
PTEN	Amp_Xp21.1	0.871	1
PTEN	Amp_Xq21.1	0.871	1
PTEN	Amp_Xq25	0.871	1
7p-Amp	Del_18q23	0.871	1
10p-Del	Amp_1q22	0.871	1
10p-Del	Amp_16q11.2	0.871	1
10q-Del	Amp_1q22	0.871	1
10q-Del	Amp_16q11.2	0.871	1
18q-Del	Amp_8q22.1	0.871	1
8p-Del	Amp_3q26.2	0.871	1
Amp_1q22	Amp_Xq21.1	0.871	1
Amp_1q22	Amp_Xq25	0.871	1
Amp_16q11.2	Amp_Xq21.1	0.871	1
Amp_16q11.2	Amp_Xq25	0.871	1
Del_8p21.3	Del_19q13.2	0.871	1
HRAS	MLL2	0.873	1
HRAS	3q-Amp	0.873	1
KLHL2	MLL2	0.873	1
KLHL2	3q-Amp	0.873	1
MLL2	1q-Amp	0.873	1
MLL2	22q-Del	0.873	1
MLL2	Xp-Del	0.873	1
MLL2	Xq-Del	0.873	1
MLL2	Amp_13q12.11	0.873	1
1q-Amp	3q-Amp	0.873	1
3q-Amp	22q-Del	0.873	1
3q-Amp	Xp-Del	0.873	1
3q-Amp	Xq-Del	0.873	1
3q-Amp	Amp_13q12.11	0.873	1
3q-Amp	Amp_15q11.2	0.873	1
10p-Del	Del_5q21.1	0.873	1
Amp_4q13.3	Del_5q21.1	0.873	1
Amp_17q23.2	Del_5q21.1	0.873	1
Amp_Xq25	Del_5q21.1	0.873	1
Del_5q21.1	Del_16q22.3	0.873	1
Del_9p23	Del_12q24.32	0.873	1
Del_12q24.32	Del_15q21.3	0.873	1
ATM	Del_6q14.3	0.874	1
PTEN	Del_16q24.1	0.874	1
8p-Del	Del_2q22.1	0.874	1
KLHL2	Del_12p13.1	0.875	1
1q-Amp	Del_12p13.1	0.875	1
16q-Del	6q-Del	0.875	1
16q-Del	Amp_Xp22.11	0.875	1
22q-Del	Del_12p13.1	0.875	1
Amp_13q12.11	Del_12p13.1	0.875	1
Amp_14q21.1	Del_12p13.1	0.875	1
AKT1	Del_17p13.1	0.877	1
PIK3CA	Del_17p13.1	0.877	1
TP53	Amp_1q22	0.877	1
8q-Amp	Del_12q24.32	0.877	1
Del_1q42.3	Del_13q22.1	0.877	1
AKT1	Amp_9q33.3	0.878	1
AKT1	Del_4q28.2	0.878	1
IDH1	Amp_9q33.3	0.878	1
IDH1	Del_1p22.1	0.878	1
IDH1	Del_4q28.2	0.878	1
IDH1	Del_12q24.32	0.878	1
SMAD4	Amp_9q33.3	0.878	1
SMAD4	Del_1p22.1	0.878	1
SMAD4	Del_4q28.2	0.878	1
SMAD4	Del_12q24.32	0.878	1
XPO5	Amp_9q33.3	0.878	1
XPO5	Del_1p22.1	0.878	1
XPO5	Del_4q28.2	0.878	1
XPO5	Del_12q24.32	0.878	1
10p-Del	Del_8p23.2	0.878	1
10q-Del	Del_8p23.2	0.878	1
10q-Del	Del_18q23	0.878	1
12p-Del	Amp_8q22.1	0.878	1
12p-Del	Amp_8q24.21	0.878	1
Amp_8q22.1	Del_9p23	0.878	1
Amp_17q23.2	Del_18q23	0.878	1
Amp_Xp21.1	Del_8p23.2	0.878	1
Amp_Xq21.1	Del_8p23.2	0.878	1
Amp_Xq21.1	Del_18q23	0.878	1
Amp_Xq25	Del_8p23.2	0.878	1
Amp_Xq25	Del_18q23	0.878	1
Del_2q22.1	Del_18q21.31	0.878	1
Del_5q11.2	Del_9p23	0.878	1
KDM6A	6q-Del	0.879	1
KDM6A	Amp_Xp22.11	0.879	1
MED12	6q-Del	0.879	1
MED12	Amp_Xp22.11	0.879	1
PIK3CA	Amp_Xp22.11	0.879	1
ZMYM3	6q-Del	0.879	1
ZMYM3	Amp_Xp22.11	0.879	1
3p-Amp	Amp_Xp22.11	0.879	1
6q-Del	8q-Del	0.879	1
6q-Del	Amp_12q23.1	0.879	1
8q-Del	Amp_Xp22.11	0.879	1
Amp_11q13.2	Del_16q22.3	0.879	1
Amp_12q23.1	Amp_Xp22.11	0.879	1
Amp_20q13.2	Amp_Xp22.11	0.879	1
Del_17q21.31	Del_18q21.31	0.879	1
SMAD4	Del_6q14.3	0.88	1
8p-Amp	Del_19q13.2	0.88	1
Amp_11q13.2	Del_18q23	0.88	1
Del_13q14.13	Del_21q22.2	0.88	1
KDM6A	Del_6q14.3	0.881	1
TP53	13q-Del	0.881	1
TP53	Amp_7q22.1	0.881	1
18q-Del	Del_5q21.1	0.881	1
Amp_20q13.2	Del_6q14.3	0.881	1
PIK3CA	Del_3p13	0.882	1
6q-Del	Del_2q22.3	0.882	1
8q-Del	Del_3p13	0.882	1
Amp_8q24.21	Del_18q21.31	0.882	1
Del_3p13	Del_18q23	0.882	1
HRAS	Amp_11q13.2	0.884	1
KLHL2	Amp_11q13.2	0.884	1
22q-Del	Amp_11q13.2	0.884	1
Xp-Del	Amp_11q13.2	0.884	1
Xq-Del	Amp_11q13.2	0.884	1
Amp_11q13.2	Amp_15q11.2	0.884	1
BRAF	10p-Del	0.885	1
BRAF	10q-Del	0.885	1
BRAF	Amp_4q13.3	0.885	1
BRAF	Amp_17q23.2	0.885	1
BRAF	Amp_Xp21.1	0.885	1
CTNNB1	10p-Del	0.885	1
CTNNB1	10q-Del	0.885	1
CTNNB1	Amp_17q23.2	0.885	1
CTNNB1	Amp_Xp21.1	0.885	1
CTNNB1	Amp_Xq21.1	0.885	1
CTNNB1	Amp_Xq25	0.885	1
9q-Amp	10p-Del	0.885	1
9q-Amp	10q-Del	0.885	1
9q-Amp	Amp_4q13.3	0.885	1
9q-Amp	Amp_Xp21.1	0.885	1
9q-Amp	Amp_Xq21.1	0.885	1
10p-Del	Amp_14q21.1	0.885	1
10p-Del	Amp_Xq27.1	0.885	1
10q-Del	Amp_14q21.1	0.885	1
10q-Del	Amp_Xq27.1	0.885	1
Amp_4q13.3	Amp_14q21.1	0.885	1
Amp_4q13.3	Amp_Xq27.1	0.885	1
Amp_14q21.1	Amp_Xq21.1	0.885	1
Amp_14q21.1	Amp_Xq25	0.885	1
Amp_Xp21.1	Amp_Xq27.1	0.885	1
Amp_Xq21.1	Amp_Xq27.1	0.885	1
PTEN	17p-Del	0.886	1
3q-Amp	Del_11q23.2	0.886	1
Del_1q42.3	Del_2q22.1	0.886	1
AKT1	ATM	0.887	1
AKT1	FOXA1	0.887	1
ATM	IDH1	0.887	1
ATM	SMAD4	0.887	1
ATM	XPO5	0.887	1
FOXA1	IDH1	0.887	1
FOXA1	SMAD4	0.887	1
FOXA1	XPO5	0.887	1
IDH1	Del_6p25.1	0.887	1
SMAD4	Del_6p25.1	0.887	1
XPO5	Del_6p25.1	0.887	1
17p-Del	Del_2q22.3	0.887	1
Del_2q22.3	Del_12q24.32	0.887	1
Del_11p11.2	Del_12p13.1	0.887	1
MLL2	SPOP	0.888	1
Amp_9q33.3	Del_12q24.32	0.888	1
16q-Del	Del_17q21.31	0.889	1
Amp_7p14.3	Del_18q23	0.89	1
Amp_11q13.2	Del_13q14.13	0.89	1
Amp_Xp22.11	Del_13q22.1	0.89	1
Del_1p31.3	Del_1q42.3	0.89	1
Del_13q22.1	Del_17q21.31	0.89	1
Amp_1q22	Del_18q21.31	0.891	1
Amp_16q11.2	Del_18q21.31	0.891	1
Del_1p31.3	Del_5q11.2	0.891	1
Del_1q42.3	Del_5q11.2	0.891	1
SMAD4	Del_10q23.31	0.892	1
SPOP	Amp_8p11.23	0.893	1
12p-Del	Del_18q23	0.893	1
17p-Del	Amp_7q22.1	0.893	1
Del_13q22.1	Del_15q21.3	0.893	1
Del_15q21.3	Del_18q23	0.893	1
MED12	Del_2q22.1	0.894	1
PIK3CA	Del_2q22.1	0.894	1
AKT1	8p-Amp	0.895	1
AKT1	Del_11p11.2	0.895	1
HRAS	PTEN	0.895	1
HRAS	Amp_1q22	0.895	1
HRAS	Amp_16q11.2	0.895	1
IDH1	8p-Amp	0.895	1
IDH1	Del_11p11.2	0.895	1
KLHL2	Amp_1q22	0.895	1
KLHL2	Amp_16q11.2	0.895	1
PTEN	1q-Amp	0.895	1
PTEN	22q-Del	0.895	1
PTEN	Xp-Del	0.895	1
PTEN	Xq-Del	0.895	1
PTEN	Amp_13q12.11	0.895	1
PTEN	Amp_15q11.2	0.895	1
XPO5	8p-Amp	0.895	1
XPO5	Del_11p11.2	0.895	1
XPO5	Del_16q22.3	0.895	1
1q-Amp	Amp_16q11.2	0.895	1
22q-Del	Amp_1q22	0.895	1
22q-Del	Amp_16q11.2	0.895	1
Xp-Del	Amp_1q22	0.895	1
Xp-Del	Amp_16q11.2	0.895	1
Xq-Del	Amp_1q22	0.895	1
Xq-Del	Amp_16q11.2	0.895	1
Amp_1q22	Amp_15q11.2	0.895	1
KDM6A	MED12	0.896	1
KDM6A	PIK3CA	0.896	1
KDM6A	ZMYM3	0.896	1
KDM6A	3p-Amp	0.896	1
KDM6A	8q-Del	0.896	1
KDM6A	Amp_12q23.1	0.896	1
KDM6A	Amp_20q13.2	0.896	1
MED12	PIK3CA	0.896	1
MED12	ZMYM3	0.896	1
MED12	8q-Del	0.896	1
MED12	Amp_12q23.1	0.896	1
MED12	Amp_20q13.2	0.896	1
PIK3CA	ZMYM3	0.896	1
PIK3CA	3p-Amp	0.896	1
PIK3CA	8q-Del	0.896	1
PIK3CA	Amp_12q23.1	0.896	1
ZMYM3	3p-Amp	0.896	1
ZMYM3	8q-Del	0.896	1
ZMYM3	Amp_12q23.1	0.896	1
ZMYM3	Amp_20q13.2	0.896	1
3p-Amp	8q-Del	0.896	1
3p-Amp	Amp_12q23.1	0.896	1
7q-Amp	Del_16q22.3	0.896	1
18q-Del	Amp_Xp22.11	0.896	1
8p-Del	Del_1p22.1	0.896	1
8p-Del	Del_12q24.32	0.896	1
8q-Del	Amp_12q23.1	0.896	1
8q-Del	Amp_20q13.2	0.896	1
Amp_12q23.1	Amp_20q13.2	0.896	1
Del_8p23.2	Del_21q22.2	0.896	1
Del_16q22.3	Del_19q13.2	0.896	1
MLL2	7q-Amp	0.897	1
MLL2	Del_11q22.3	0.897	1
MLL2	Del_19q13.2	0.897	1
ZMYM3	Del_10q23.31	0.897	1
3q-Amp	Del_19q13.2	0.897	1
18p-Del	8p-Del	0.897	1
8p-Del	Del_11q23.2	0.897	1
8q-Del	Del_10q23.31	0.897	1
Amp_16q11.2	Del_5q11.2	0.897	1
Del_6q14.3	Del_16q24.1	0.897	1
FOXA1	8q-Amp	0.898	1
10p-Del	Amp_Xp22.11	0.898	1
10q-Del	6q-Del	0.898	1
10q-Del	Amp_Xp22.11	0.898	1
10q-Del	Del_17q21.31	0.898	1
16q-Del	Del_6p25.1	0.898	1
6q-Del	Amp_Xp21.1	0.898	1
6q-Del	Amp_Xq21.1	0.898	1
Amp_4q13.3	Amp_Xp22.11	0.898	1
Amp_4q13.3	Del_5q13.2	0.898	1
Amp_17q23.2	Del_5q13.2	0.898	1
Amp_17q23.2	Del_17q21.31	0.898	1
Amp_Xp22.11	Amp_Xq21.1	0.898	1
Amp_Xp22.11	Amp_Xq25	0.898	1
Amp_Xp21.1	Del_17q21.31	0.898	1
Del_9p23	Del_16q24.1	0.899	1
Del_15q21.3	Del_16q24.1	0.899	1
BRAF	TP53	0.9	1
CTNNB1	TP53	0.9	1
7p-Amp	8p-Del	0.9	1
8p-Del	Amp_8q22.1	0.9	1
8p-Del	Amp_8q24.21	0.9	1
ATM	Del_4q28.2	0.901	1
ATM	Del_12q24.32	0.901	1
FOXA1	Amp_9q33.3	0.901	1
ZMYM3	Del_16q22.3	0.901	1
3p-Amp	Del_16q22.3	0.901	1
Amp_3q21.3	Del_3p13	0.901	1
Amp_8q22.1	Del_1p22.1	0.901	1
Amp_8q24.21	Del_12q24.32	0.901	1
Amp_9q33.3	Del_6p25.1	0.901	1
Amp_12q23.1	Del_16q22.3	0.901	1
Del_3p13	Del_11q23.2	0.901	1
Del_4q28.2	Del_6p25.1	0.901	1
Del_6p25.1	Del_12q24.32	0.901	1
ATM	Del_16q22.3	0.902	1
FOXA1	Del_16q22.3	0.902	1
Del_6p25.1	Del_16q22.3	0.902	1
SPOP	Amp_Xq21.1	0.903	1
SPOP	Amp_Xq25	0.903	1
8p-Amp	12p-Del	0.903	1
8p-Amp	Del_9p23	0.903	1
Amp_1q22	Del_5q21.1	0.903	1
Amp_11q13.2	Del_11q23.2	0.903	1
Amp_16q11.2	Del_5q21.1	0.903	1
Del_1p22.1	Del_8p21.3	0.903	1
Del_9p23	Del_11p11.2	0.903	1
Del_11p11.2	Del_15q21.3	0.903	1
Del_17q21.31	Del_21q22.2	0.903	1
AKT1	MLL2	0.904	1
AKT1	3q-Amp	0.904	1
IDH1	MLL2	0.904	1
IDH1	3q-Amp	0.904	1
MLL2	SMAD4	0.904	1
MLL2	XPO5	0.904	1
SMAD4	3q-Amp	0.904	1
XPO5	3q-Amp	0.904	1
Amp_16q11.2	Del_1p31.3	0.904	1
Del_5q11.2	Del_21q22.3	0.904	1
18q-Del	Del_1p22.1	0.905	1
ATM	Del_2q22.3	0.906	1
7q-Amp	17p-Del	0.906	1
8q-Amp	Amp_12q23.1	0.906	1
16q-Del	8q-Del	0.906	1
16q-Del	Amp_12q23.1	0.906	1
16q-Del	Amp_20q13.2	0.906	1
17p-Del	Del_11q22.3	0.906	1
Amp_11q13.2	Del_5q13.2	0.906	1
Del_2q22.3	Del_6p25.1	0.906	1
BRAF	HRAS	0.907	1
BRAF	KLHL2	0.907	1
BRAF	1q-Amp	0.907	1
BRAF	22q-Del	0.907	1
BRAF	Xp-Del	0.907	1
BRAF	Xq-Del	0.907	1
BRAF	Amp_13q12.11	0.907	1
BRAF	Amp_15q11.2	0.907	1
CTNNB1	HRAS	0.907	1
CTNNB1	KLHL2	0.907	1
CTNNB1	1q-Amp	0.907	1
CTNNB1	22q-Del	0.907	1
CTNNB1	Xp-Del	0.907	1
CTNNB1	Xq-Del	0.907	1
CTNNB1	Amp_13q12.11	0.907	1
CTNNB1	Amp_15q11.2	0.907	1
HRAS	9q-Amp	0.907	1
HRAS	Amp_14q21.1	0.907	1
HRAS	Amp_Xq27.1	0.907	1
KLHL2	9q-Amp	0.907	1
KLHL2	Amp_14q21.1	0.907	1
KLHL2	Amp_Xq27.1	0.907	1
XPO5	8p-Del	0.907	1
1q-Amp	9q-Amp	0.907	1
1q-Amp	Amp_14q21.1	0.907	1
1q-Amp	Amp_Xq27.1	0.907	1
9q-Amp	Amp_15q11.2	0.907	1
22q-Del	Amp_14q21.1	0.907	1
Xp-Del	Amp_14q21.1	0.907	1
Xp-Del	Amp_Xq27.1	0.907	1
Xq-Del	Amp_14q21.1	0.907	1
Xq-Del	Amp_Xq27.1	0.907	1
Amp_13q12.11	Amp_Xq27.1	0.907	1
Amp_14q21.1	Amp_15q11.2	0.907	1
Amp_15q11.2	Amp_Xq27.1	0.907	1
BRAF	17p-Del	0.908	1
CTNNB1	7p-Amp	0.908	1
7p-Amp	18q-Del	0.908	1
7p-Amp	Amp_14q21.1	0.908	1
17p-Del	Amp_Xq27.1	0.908	1
HRAS	Del_18q21.31	0.91	1
1q-Amp	Del_18q21.31	0.91	1
Xp-Del	Del_18q21.31	0.91	1
Xq-Del	Del_18q21.31	0.91	1
Del_11q23.2	Del_13q14.13	0.91	1
KDM6A	Del_2q22.3	0.911	1
8q-Del	Del_2q22.3	0.911	1
Amp_3q21.3	Del_16q24.1	0.911	1
Del_11q23.2	Del_21q22.3	0.911	1
AKT1	Amp_11q13.2	0.912	1
IDH1	Amp_11q13.2	0.912	1
KDM6A	10p-Del	0.912	1
KDM6A	10q-Del	0.912	1
KDM6A	Amp_4q13.3	0.912	1
KDM6A	Amp_17q23.2	0.912	1
KDM6A	Amp_Xp21.1	0.912	1
KDM6A	Amp_Xq21.1	0.912	1
KDM6A	Amp_Xq25	0.912	1
MED12	10q-Del	0.912	1
MED12	Amp_4q13.3	0.912	1
MED12	Amp_17q23.2	0.912	1
MED12	Amp_Xp21.1	0.912	1
MED12	Amp_Xq21.1	0.912	1
MED12	Amp_Xq25	0.912	1
PIK3CA	10p-Del	0.912	1
PIK3CA	10q-Del	0.912	1
PIK3CA	Amp_4q13.3	0.912	1
PIK3CA	Amp_17q23.2	0.912	1
PIK3CA	Amp_Xp21.1	0.912	1
PIK3CA	Amp_Xq21.1	0.912	1
SMAD4	Amp_11q13.2	0.912	1
SPOP	Amp_11q13.2	0.912	1
XPO5	Amp_11q13.2	0.912	1
ZMYM3	10p-Del	0.912	1
ZMYM3	10q-Del	0.912	1
ZMYM3	Amp_4q13.3	0.912	1
ZMYM3	Amp_Xp21.1	0.912	1
ZMYM3	Amp_Xq21.1	0.912	1
ZMYM3	Amp_Xq25	0.912	1
3p-Amp	10p-Del	0.912	1
3p-Amp	10q-Del	0.912	1
3p-Amp	Amp_Xp21.1	0.912	1
3p-Amp	Amp_Xq21.1	0.912	1
3p-Amp	Amp_Xq25	0.912	1
10p-Del	8q-Del	0.912	1
10p-Del	Amp_20q13.2	0.912	1
10q-Del	Amp_12q23.1	0.912	1
10q-Del	Amp_20q13.2	0.912	1
8q-Del	Amp_4q13.3	0.912	1
8q-Del	Amp_17q23.2	0.912	1
8q-Del	Amp_Xp21.1	0.912	1
8q-Del	Amp_Xq25	0.912	1
Amp_4q13.3	Amp_12q23.1	0.912	1
Amp_12q23.1	Amp_17q23.2	0.912	1
Amp_12q23.1	Amp_Xp21.1	0.912	1
Amp_12q23.1	Amp_Xq21.1	0.912	1
Amp_12q23.1	Amp_Xq25	0.912	1
Amp_20q13.2	Amp_Xp21.1	0.912	1
Amp_20q13.2	Amp_Xq21.1	0.912	1
FOXA1	Del_6p25.1	0.913	1
KLHL2	Amp_8q22.1	0.913	1
KLHL2	Amp_8q24.21	0.913	1
KLHL2	Del_5q11.2	0.913	1
12p-Del	Del_13q14.13	0.913	1
22q-Del	Del_5q11.2	0.913	1
Amp_8q22.1	Amp_15q11.2	0.913	1
Amp_8q24.21	Amp_15q11.2	0.913	1
Amp_11q13.2	Del_11q22.3	0.913	1
Amp_13q12.11	Del_5q11.2	0.913	1
8p-Amp	Del_1p22.1	0.914	1
Del_12q24.32	Del_18q23	0.914	1
Del_17q21.31	Del_18q23	0.914	1
PTEN	Del_16q22.3	0.915	1
3p-Amp	8p-Del	0.915	1
13q-Del	Del_1p31.3	0.915	1
13q-Del	Del_1q42.3	0.915	1
8p-Del	Amp_12q23.1	0.915	1
Amp_1q22	Del_16q22.3	0.915	1
Amp_3q21.3	Del_1p31.3	0.915	1
Amp_7p14.3	Amp_14q21.1	0.915	1
Amp_7q22.1	Del_1p31.3	0.915	1
Del_1q42.3	Del_11q23.2	0.915	1
CTNNB1	Del_16q24.1	0.916	1
9q-Amp	Del_21q22.3	0.916	1
10p-Del	Del_3p13	0.916	1
10q-Del	Del_3p13	0.916	1
Amp_4q13.3	Del_3p13	0.916	1
Amp_Xq21.1	Del_3p13	0.916	1
KLHL2	Del_5q21.1	0.917	1
MLL2	Del_15q21.3	0.917	1
XPO5	Del_13q22.1	0.917	1
1q-Amp	Del_5q21.1	0.917	1
3q-Amp	Del_9p23	0.917	1
18p-Del	Del_2q22.1	0.917	1
22q-Del	Del_5q21.1	0.917	1
Amp_7p14.3	Del_11q22.3	0.917	1
Amp_13q12.11	Del_5q21.1	0.917	1
Del_3p13	Del_11q22.3	0.917	1
HRAS	6q-Del	0.918	1
HRAS	Amp_Xp22.11	0.918	1
KLHL2	6q-Del	0.918	1
KLHL2	Amp_Xp22.11	0.918	1
8q-Amp	18q-Del	0.918	1
22q-Del	Amp_Xp22.11	0.918	1
6q-Del	Xp-Del	0.918	1
6q-Del	Xq-Del	0.918	1
6q-Del	Amp_13q12.11	0.918	1
6q-Del	Amp_15q11.2	0.918	1
Xp-Del	Amp_Xp22.11	0.918	1
Xq-Del	Amp_Xp22.11	0.918	1
Amp_15q11.2	Amp_Xp22.11	0.918	1
Del_1p22.1	Del_13q22.1	0.918	1
10q-Del	Del_21q22.3	0.919	1
Amp_4q13.3	Del_16q24.1	0.919	1
Amp_Xp21.1	Del_16q24.1	0.919	1
Amp_Xq21.1	Del_21q22.3	0.919	1
Amp_Xq25	Del_21q22.3	0.919	1
BRAF	Del_18q21.31	0.92	1
CTNNB1	Del_18q21.31	0.92	1
PTEN	13q-Del	0.92	1
PTEN	18p-Del	0.92	1
PTEN	Del_11q23.2	0.92	1
3q-Amp	Del_16q24.1	0.92	1
9q-Amp	Del_18q21.31	0.92	1
18p-Del	Amp_16q11.2	0.92	1
Amp_1q22	Del_11q23.2	0.92	1
Amp_7q22.1	Del_18q21.31	0.92	1
Amp_14q21.1	Del_18q21.31	0.92	1
Amp_16q11.2	Del_11q23.2	0.92	1
Del_8p21.3	Del_11q23.2	0.92	1
Del_16q22.3	Del_21q22.2	0.92	1
AKT1	PTEN	0.921	1
AKT1	Amp_1q22	0.921	1
AKT1	Amp_16q11.2	0.921	1
HRAS	Del_18q23	0.921	1
IDH1	PTEN	0.921	1
IDH1	Amp_1q22	0.921	1
IDH1	Amp_16q11.2	0.921	1
PTEN	SMAD4	0.921	1
PTEN	XPO5	0.921	1
SMAD4	Amp_16q11.2	0.921	1
XPO5	Amp_1q22	0.921	1
XPO5	Amp_16q11.2	0.921	1
1q-Amp	Del_18q23	0.921	1
18q-Del	Amp_7p14.3	0.921	1
Amp_13q12.11	Del_18q23	0.921	1
ATM	8p-Del	0.922	1
ATM	Amp_8q24.21	0.922	1
BRAF	Del_1q42.3	0.922	1
FOXA1	Del_5q11.2	0.922	1
PIK3CA	18q-Del	0.922	1
TP53	Amp_Xp22.11	0.922	1
18q-Del	Amp_12q23.1	0.922	1
Amp_8q22.1	Del_6p25.1	0.922	1
Amp_8q24.21	Del_6p25.1	0.922	1
Amp_14q21.1	Del_1q42.3	0.922	1
8p-Amp	Del_2q22.3	0.923	1
TP53	Del_9p23	0.924	1
Del_2q22.3	Del_17p13.1	0.924	1
Del_8p23.2	Del_11q23.2	0.924	1
ATM	8p-Amp	0.925	1
CTNNB1	Amp_8q22.1	0.925	1
CTNNB1	Amp_8q24.21	0.925	1
CTNNB1	Del_5q11.2	0.925	1
10p-Del	Del_2q22.1	0.925	1
Amp_3q26.2	Del_11q23.2	0.925	1
Amp_4q13.3	Del_2q22.1	0.925	1
Amp_Xq27.1	Del_5q11.2	0.925	1
Del_6p25.1	Del_11p11.2	0.925	1
7q-Amp	Del_1p31.3	0.926	1
Amp_8q22.1	Del_11q23.2	0.926	1
Amp_9q33.3	Del_21q22.3	0.926	1
Del_1p22.1	Del_16q24.1	0.926	1
Del_1p22.1	Del_21q22.3	0.926	1
MLL2	Del_4q28.2	0.927	1
10p-Del	Amp_4q13.3	0.927	1
10p-Del	Amp_17q23.2	0.927	1
10p-Del	Amp_Xp21.1	0.927	1
10p-Del	Amp_Xq21.1	0.927	1
10p-Del	Amp_Xq25	0.927	1
10q-Del	Amp_4q13.3	0.927	1
10q-Del	Amp_17q23.2	0.927	1
10q-Del	Amp_Xp21.1	0.927	1
10q-Del	Amp_Xq25	0.927	1
Amp_4q13.3	Amp_Xp21.1	0.927	1
Amp_4q13.3	Amp_Xq21.1	0.927	1
Amp_4q13.3	Amp_Xq25	0.927	1
Amp_4q13.3	Del_17p13.1	0.927	1
Amp_17q23.2	Amp_Xp21.1	0.927	1
Amp_17q23.2	Amp_Xq21.1	0.927	1
Amp_Xp21.1	Amp_Xq21.1	0.927	1
Amp_Xq25	Del_17p13.1	0.927	1
PTEN	Del_11q22.3	0.928	1
PTEN	Del_17q21.31	0.928	1
7p-Amp	6q-Del	0.928	1
7p-Amp	Amp_Xp22.11	0.928	1
8q-Del	Del_13q22.1	0.928	1
Amp_1q22	Del_5q13.2	0.928	1
Amp_1q22	Del_11q22.3	0.928	1
Amp_12q23.1	Del_13q22.1	0.928	1
Amp_16q11.2	Del_5q13.2	0.928	1
Amp_16q11.2	Del_17q21.31	0.928	1
Amp_16q11.2	Del_19q13.2	0.928	1
Del_5q21.1	Del_18q23	0.928	1
AKT1	BRAF	0.929	1
AKT1	CTNNB1	0.929	1
AKT1	9q-Amp	0.929	1
AKT1	Amp_14q21.1	0.929	1
AKT1	Amp_Xq27.1	0.929	1
BRAF	SMAD4	0.929	1
BRAF	Del_5q21.1	0.929	1
CTNNB1	IDH1	0.929	1
HRAS	KDM6A	0.929	1
HRAS	MED12	0.929	1
HRAS	PIK3CA	0.929	1
HRAS	ZMYM3	0.929	1
HRAS	3p-Amp	0.929	1
HRAS	Amp_12q23.1	0.929	1
HRAS	Amp_20q13.2	0.929	1
IDH1	9q-Amp	0.929	1
IDH1	Amp_14q21.1	0.929	1
IDH1	Amp_Xq27.1	0.929	1
KDM6A	KLHL2	0.929	1
KDM6A	1q-Amp	0.929	1
KDM6A	22q-Del	0.929	1
KDM6A	Xp-Del	0.929	1
KDM6A	Xq-Del	0.929	1
KDM6A	Amp_13q12.11	0.929	1
KDM6A	Amp_15q11.2	0.929	1
KLHL2	MED12	0.929	1
KLHL2	PIK3CA	0.929	1
KLHL2	ZMYM3	0.929	1
KLHL2	3p-Amp	0.929	1
KLHL2	8q-Del	0.929	1
KLHL2	Amp_12q23.1	0.929	1
KLHL2	Amp_20q13.2	0.929	1
MED12	1q-Amp	0.929	1
MED12	22q-Del	0.929	1
MED12	Xp-Del	0.929	1
MED12	Xq-Del	0.929	1
MED12	Amp_13q12.11	0.929	1
MED12	Amp_15q11.2	0.929	1
PIK3CA	1q-Amp	0.929	1
PIK3CA	22q-Del	0.929	1
PIK3CA	Xp-Del	0.929	1
PIK3CA	Xq-Del	0.929	1
PIK3CA	Amp_13q12.11	0.929	1
PIK3CA	Amp_15q11.2	0.929	1
SMAD4	9q-Amp	0.929	1
SMAD4	Amp_14q21.1	0.929	1
SMAD4	Amp_Xq27.1	0.929	1
XPO5	9q-Amp	0.929	1
XPO5	Amp_14q21.1	0.929	1
XPO5	Amp_Xq27.1	0.929	1
ZMYM3	1q-Amp	0.929	1
ZMYM3	22q-Del	0.929	1
ZMYM3	Xp-Del	0.929	1
ZMYM3	Xq-Del	0.929	1
ZMYM3	Amp_13q12.11	0.929	1
1q-Amp	3p-Amp	0.929	1
1q-Amp	8q-Del	0.929	1
1q-Amp	Amp_12q23.1	0.929	1
1q-Amp	Amp_20q13.2	0.929	1
3p-Amp	22q-Del	0.929	1
3p-Amp	Xp-Del	0.929	1
3p-Amp	Xq-Del	0.929	1
3p-Amp	Amp_13q12.11	0.929	1
3p-Amp	Amp_15q11.2	0.929	1
9q-Amp	Del_6q14.3	0.929	1
16q-Del	Del_3p13	0.929	1
22q-Del	8q-Del	0.929	1
22q-Del	Amp_12q23.1	0.929	1
8q-Del	Xp-Del	0.929	1
8q-Del	Xq-Del	0.929	1
8q-Del	Amp_15q11.2	0.929	1
Xp-Del	Amp_12q23.1	0.929	1
Xp-Del	Amp_20q13.2	0.929	1
Xq-Del	Amp_12q23.1	0.929	1
Xq-Del	Amp_20q13.2	0.929	1
Amp_3q26.2	Amp_Xq27.1	0.929	1
Amp_8q22.1	Del_2q22.3	0.929	1
Amp_12q23.1	Amp_13q12.11	0.929	1
Amp_12q23.1	Amp_15q11.2	0.929	1
Amp_13q12.11	Amp_20q13.2	0.929	1
Amp_14q21.1	Del_5q21.1	0.929	1
Amp_15q11.2	Amp_20q13.2	0.929	1
Amp_Xq27.1	Del_5q21.1	0.929	1
12p-Del	Amp_11q13.2	0.93	1
Amp_1q22	Del_13q14.13	0.93	1
Amp_4q13.3	Del_6q14.3	0.93	1
Amp_11q13.2	Del_15q21.3	0.93	1
Del_8p23.2	Del_11p11.2	0.93	1
18p-Del	Del_6q14.3	0.931	1
Del_3p13	Del_21q22.2	0.931	1
8q-Amp	Amp_3q21.3	0.932	1
12p-Del	17p-Del	0.932	1
16q-Del	Del_11q23.2	0.932	1
17p-Del	Del_15q21.3	0.932	1
Amp_Xp22.11	Del_8p21.3	0.932	1
3q-Amp	8q-Amp	0.933	1
7q-Amp	Del_16q24.1	0.933	1
8q-Amp	Del_18q23	0.933	1
9q-Amp	Del_18q23	0.933	1
10p-Del	16q-Del	0.933	1
16q-Del	Amp_17q23.2	0.933	1
16q-Del	Amp_Xp21.1	0.933	1
Amp_14q21.1	Del_18q23	0.933	1
Del_11q22.3	Del_21q22.3	0.933	1
Del_16q24.1	Del_19q13.2	0.933	1
1q-Amp	Del_13q14.13	0.934	1
1q-Amp	Del_17q21.31	0.934	1
22q-Del	Del_5q13.2	0.934	1
22q-Del	Del_13q14.13	0.934	1
6q-Del	Amp_7p14.3	0.934	1
Xp-Del	Del_17q21.31	0.934	1
Xq-Del	Del_17q21.31	0.934	1
Amp_7p14.3	Amp_Xp22.11	0.934	1
Amp_13q12.11	Del_5q13.2	0.934	1
Amp_13q12.11	Del_13q14.13	0.934	1
Amp_15q11.2	Del_13q14.13	0.934	1
Amp_15q11.2	Del_17q21.31	0.934	1
18p-Del	Del_11q23.2	0.935	1
Amp_8p11.23	Del_13q14.13	0.935	1
ATM	3q-Amp	0.936	1
CTNNB1	13q-Del	0.936	1
CTNNB1	Amp_7q22.1	0.936	1
CTNNB1	Del_11q23.2	0.936	1
TP53	Del_12q24.32	0.936	1
3q-Amp	Del_6p25.1	0.936	1
7q-Amp	Del_18q21.31	0.936	1
8p-Amp	18q-Del	0.936	1
8p-Amp	Del_18q21.31	0.936	1
9q-Amp	13q-Del	0.936	1
9q-Amp	18p-Del	0.936	1
18q-Del	Del_11p11.2	0.936	1
Amp_7q22.1	Amp_14q21.1	0.936	1
Amp_16q11.2	Del_21q22.2	0.936	1
Del_1p31.3	Del_5q13.2	0.936	1
Del_1p31.3	Del_17q21.31	0.936	1
Del_1q42.3	Del_5q13.2	0.936	1
Del_11p11.2	Del_18q21.31	0.936	1
KLHL2	SPOP	0.937	1
10p-Del	Del_2q22.3	0.937	1
10q-Del	Del_2q22.3	0.937	1
Amp_Xq21.1	Del_2q22.3	0.937	1
Del_1q42.3	Del_21q22.2	0.937	1
Del_9p23	Del_10q23.31	0.937	1
AKT1	6q-Del	0.938	1
AKT1	Amp_Xp22.11	0.938	1
IDH1	6q-Del	0.938	1
IDH1	Amp_Xp22.11	0.938	1
SMAD4	6q-Del	0.938	1
SMAD4	Amp_Xp22.11	0.938	1
XPO5	6q-Del	0.938	1
XPO5	Amp_Xp22.11	0.938	1
8q-Amp	Del_13q22.1	0.938	1
8p-Del	Del_1q42.3	0.938	1
Amp_1q22	Del_8p23.2	0.938	1
Del_5q21.1	Del_8p21.3	0.938	1
MLL2	Del_2q22.3	0.939	1
7p-Amp	Del_18q21.31	0.939	1
Amp_8p11.23	Del_13q22.1	0.939	1
Amp_11q13.2	Del_2q22.1	0.939	1
Amp_11q13.2	Del_4q28.2	0.939	1
Amp_11q13.2	Del_12q24.32	0.939	1
HRAS	Del_8p23.2	0.94	1
KLHL2	Del_8p23.2	0.94	1
TP53	Del_12p13.1	0.94	1
6q-Del	Del_1q42.3	0.94	1
Amp_15q11.2	Del_8p23.2	0.94	1
Amp_17q23.2	Del_10q23.31	0.94	1
Amp_Xp22.11	Del_1p31.3	0.94	1
Amp_Xq25	Del_10q23.31	0.94	1
Del_1p22.1	Del_13q14.13	0.94	1
Del_1q42.3	Del_21q22.3	0.94	1
HRAS	10p-Del	0.941	1
HRAS	10q-Del	0.941	1
HRAS	Amp_17q23.2	0.941	1
HRAS	Amp_Xp21.1	0.941	1
HRAS	Amp_Xq21.1	0.941	1
HRAS	Amp_Xq25	0.941	1
KLHL2	10p-Del	0.941	1
KLHL2	10q-Del	0.941	1
KLHL2	Amp_4q13.3	0.941	1
KLHL2	Amp_17q23.2	0.941	1
KLHL2	Amp_Xp21.1	0.941	1
KLHL2	Amp_Xq21.1	0.941	1
KLHL2	Amp_Xq25	0.941	1
1q-Amp	10q-Del	0.941	1
1q-Amp	Amp_4q13.3	0.941	1
1q-Amp	Amp_17q23.2	0.941	1
1q-Amp	Amp_Xq21.1	0.941	1
1q-Amp	Amp_Xq25	0.941	1
10p-Del	22q-Del	0.941	1
10p-Del	Xp-Del	0.941	1
10p-Del	Xq-Del	0.941	1
10p-Del	Amp_13q12.11	0.941	1
10p-Del	Amp_15q11.2	0.941	1
10q-Del	22q-Del	0.941	1
10q-Del	Xp-Del	0.941	1
10q-Del	Xq-Del	0.941	1
10q-Del	Amp_15q11.2	0.941	1
12p-Del	Del_16q22.3	0.941	1
22q-Del	Amp_4q13.3	0.941	1
22q-Del	Amp_Xp21.1	0.941	1
22q-Del	Amp_Xq21.1	0.941	1
Xp-Del	Amp_4q13.3	0.941	1
Xp-Del	Amp_17q23.2	0.941	1
Xp-Del	Amp_Xp21.1	0.941	1
Xp-Del	Amp_Xq21.1	0.941	1
Xp-Del	Amp_Xq25	0.941	1
Xq-Del	Amp_4q13.3	0.941	1
Xq-Del	Amp_17q23.2	0.941	1
Xq-Del	Amp_Xp21.1	0.941	1
Xq-Del	Amp_Xq21.1	0.941	1
Xq-Del	Amp_Xq25	0.941	1
Amp_4q13.3	Amp_13q12.11	0.941	1
Amp_4q13.3	Amp_15q11.2	0.941	1
Amp_9q33.3	Del_12p13.1	0.941	1
Amp_13q12.11	Amp_Xq21.1	0.941	1
Amp_13q12.11	Amp_Xq25	0.941	1
Amp_15q11.2	Amp_Xp21.1	0.941	1
Amp_15q11.2	Amp_Xq21.1	0.941	1
Amp_15q11.2	Amp_Xq25	0.941	1
Amp_Xq27.1	Del_10q23.31	0.941	1
Del_5q11.2	Del_19q13.2	0.941	1
Del_9p23	Del_16q22.3	0.941	1
CTNNB1	7q-Amp	0.942	1
CTNNB1	Amp_8p11.23	0.942	1
CTNNB1	Del_11q22.3	0.942	1
SPOP	Del_1p22.1	0.942	1
TP53	8q-Del	0.942	1
7q-Amp	Amp_14q21.1	0.942	1
9q-Amp	Amp_8p11.23	0.942	1
9q-Amp	Del_11q22.3	0.942	1
9q-Amp	Del_19q13.2	0.942	1
10q-Del	Del_16q22.3	0.942	1
18q-Del	Amp_3q26.2	0.942	1
Amp_4q13.3	Del_16q22.3	0.942	1
Amp_8p11.23	Amp_14q21.1	0.942	1
Amp_14q21.1	Del_11q22.3	0.942	1
Amp_Xp21.1	Del_16q22.3	0.942	1
Amp_Xq27.1	Del_19q13.2	0.942	1
Del_18q21.31	Del_21q22.3	0.942	1
PIK3CA	Del_12p13.1	0.943	1
PTEN	Del_15q21.3	0.943	1
17p-Del	Del_1p22.1	0.943	1
17p-Del	Del_4q28.2	0.943	1
8q-Del	Del_12p13.1	0.943	1
Amp_16q11.2	Del_9p23	0.943	1
Amp_16q11.2	Del_15q21.3	0.943	1
CTNNB1	Del_16q22.3	0.944	1
8q-Amp	Del_19q13.2	0.944	1
13q-Del	Del_11q22.3	0.944	1
16q-Del	Del_19q13.2	0.944	1
18p-Del	Del_11q22.3	0.944	1
Amp_3q21.3	Del_19q13.2	0.944	1
Amp_8p11.23	Del_11q23.2	0.944	1
Del_1q42.3	Del_8p23.2	0.944	1
Del_12p13.1	Del_18q23	0.944	1
3q-Amp	8p-Amp	0.945	1
10q-Del	18q-Del	0.945	1
18q-Del	Amp_Xp21.1	0.945	1
18q-Del	Amp_Xq21.1	0.945	1
Amp_Xp22.11	Del_18q21.31	0.945	1
Del_3p13	Del_9p23	0.945	1
Del_3p13	Del_16q22.3	0.945	1
PIK3CA	17p-Del	0.946	1
ZMYM3	17p-Del	0.946	1
3p-Amp	17p-Del	0.946	1
7p-Amp	8q-Del	0.946	1
7p-Amp	Amp_12q23.1	0.946	1
16q-Del	Del_21q22.3	0.946	1
17p-Del	Amp_12q23.1	0.946	1
17p-Del	Amp_20q13.2	0.946	1
Del_8p23.2	Del_11q22.3	0.946	1
AKT1	KDM6A	0.947	1
AKT1	MED12	0.947	1
AKT1	PIK3CA	0.947	1
AKT1	ZMYM3	0.947	1
AKT1	3p-Amp	0.947	1
AKT1	8q-Del	0.947	1
AKT1	Amp_12q23.1	0.947	1
AKT1	Amp_20q13.2	0.947	1
ATM	TP53	0.947	1
ATM	Amp_11q13.2	0.947	1
FOXA1	Amp_11q13.2	0.947	1
IDH1	KDM6A	0.947	1
IDH1	MED12	0.947	1
IDH1	PIK3CA	0.947	1
IDH1	3p-Amp	0.947	1
IDH1	8q-Del	0.947	1
IDH1	Amp_12q23.1	0.947	1
IDH1	Amp_20q13.2	0.947	1
KDM6A	SMAD4	0.947	1
KDM6A	XPO5	0.947	1
MED12	SMAD4	0.947	1
MED12	XPO5	0.947	1
PIK3CA	SMAD4	0.947	1
PIK3CA	XPO5	0.947	1
SMAD4	ZMYM3	0.947	1
SMAD4	3p-Amp	0.947	1
SMAD4	8q-Del	0.947	1
SMAD4	Amp_12q23.1	0.947	1
SMAD4	Amp_20q13.2	0.947	1
TP53	Del_6p25.1	0.947	1
TP53	Del_21q22.3	0.947	1
XPO5	ZMYM3	0.947	1
XPO5	3p-Amp	0.947	1
XPO5	8q-Del	0.947	1
XPO5	Amp_12q23.1	0.947	1
XPO5	Amp_20q13.2	0.947	1
Amp_11q13.2	Del_16q24.1	0.947	1
Del_1q42.3	Del_9p23	0.947	1
Del_3p13	Del_13q14.13	0.947	1
PIK3CA	Del_13q14.13	0.948	1
ZMYM3	Del_13q14.13	0.948	1
9q-Amp	Del_17q21.31	0.948	1
9q-Amp	Del_21q22.2	0.948	1
6q-Del	Amp_8q24.21	0.948	1
8q-Del	Del_13q14.13	0.948	1
Amp_12q23.1	Del_13q14.13	0.948	1
Amp_14q21.1	Del_21q22.2	0.948	1
Amp_Xq27.1	Del_21q22.2	0.948	1
Del_6q14.3	Del_16q22.3	0.948	1
Del_8p21.3	Del_11q22.3	0.948	1
FOXA1	Del_16q24.1	0.949	1
MLL2	18q-Del	0.949	1
8p-Amp	Del_18q23	0.949	1
Amp_8p11.23	Del_6q14.3	0.949	1
AKT1	Del_8p21.3	0.95	1
13q-Del	6q-Del	0.95	1
13q-Del	Amp_Xp22.11	0.95	1
17p-Del	Del_5q21.1	0.95	1
18p-Del	6q-Del	0.95	1
6q-Del	Amp_7q22.1	0.95	1
6q-Del	Del_11q23.2	0.95	1
Amp_1q22	Del_4q28.2	0.95	1
Amp_1q22	Del_12q24.32	0.95	1
Amp_3q21.3	Amp_Xp22.11	0.95	1
Amp_8p11.23	Del_2q22.3	0.95	1
ATM	Del_17q21.31	0.951	1
FOXA1	Del_5q13.2	0.951	1
XPO5	Del_18q21.31	0.951	1
3q-Amp	Del_16q22.3	0.951	1
7q-Amp	Del_11q22.3	0.951	1
8p-Del	Amp_4q13.3	0.951	1
8p-Del	Amp_Xq21.1	0.951	1
8q-Del	Amp_7p14.3	0.951	1
Amp_7p14.3	Del_18q21.31	0.951	1
Amp_7q22.1	Del_16q22.3	0.951	1
Amp_8p11.23	Del_11q22.3	0.951	1
HRAS	KLHL2	0.952	1
HRAS	1q-Amp	0.952	1
HRAS	22q-Del	0.952	1
HRAS	Xp-Del	0.952	1
HRAS	Xq-Del	0.952	1
HRAS	Amp_13q12.11	0.952	1
HRAS	Amp_15q11.2	0.952	1
KLHL2	1q-Amp	0.952	1
KLHL2	22q-Del	0.952	1
KLHL2	Xp-Del	0.952	1
KLHL2	Xq-Del	0.952	1
KLHL2	Amp_13q12.11	0.952	1
KLHL2	Amp_15q11.2	0.952	1
1q-Amp	22q-Del	0.952	1
1q-Amp	Xp-Del	0.952	1
1q-Amp	Xq-Del	0.952	1
1q-Amp	Amp_13q12.11	0.952	1
1q-Amp	Amp_15q11.2	0.952	1
1q-Amp	Del_2q22.1	0.952	1
7p-Amp	17p-Del	0.952	1
13q-Del	Del_21q22.2	0.952	1
18q-Del	Del_11q23.2	0.952	1
22q-Del	Xp-Del	0.952	1
22q-Del	Xq-Del	0.952	1
22q-Del	Amp_13q12.11	0.952	1
22q-Del	Amp_15q11.2	0.952	1
Xp-Del	Amp_15q11.2	0.952	1
Xq-Del	Amp_15q11.2	0.952	1
Amp_13q12.11	Amp_15q11.2	0.952	1
Amp_13q12.11	Del_2q22.1	0.952	1
Del_16q24.1	Del_21q22.2	0.952	1
AKT1	Amp_8q22.1	0.953	1
ATM	7p-Amp	0.953	1
ATM	17p-Del	0.953	1
SMAD4	Amp_8q22.1	0.953	1
SMAD4	Amp_8q24.21	0.953	1
17p-Del	Del_6p25.1	0.953	1
Del_17p13.1	Del_17q21.31	0.953	1
CTNNB1	Del_15q21.3	0.954	1
9q-Amp	12p-Del	0.954	1
9q-Amp	Del_9p23	0.954	1
Amp_1q22	Del_2q22.1	0.954	1
Amp_11q13.2	Del_11p11.2	0.954	1
Amp_Xp22.11	Del_18q23	0.954	1
Del_5q11.2	Del_21q22.2	0.954	1
Del_5q21.1	Del_18q21.31	0.954	1
Del_13q22.1	Del_18q23	0.954	1
Del_13q22.1	Del_21q22.2	0.954	1
AKT1	10p-Del	0.955	1
AKT1	10q-Del	0.955	1
AKT1	Amp_4q13.3	0.955	1
AKT1	Amp_17q23.2	0.955	1
AKT1	Amp_Xp21.1	0.955	1
AKT1	Amp_Xq25	0.955	1
IDH1	10p-Del	0.955	1
IDH1	10q-Del	0.955	1
IDH1	Amp_4q13.3	0.955	1
IDH1	Amp_17q23.2	0.955	1
IDH1	Amp_Xp21.1	0.955	1
IDH1	Amp_Xq21.1	0.955	1
IDH1	Amp_Xq25	0.955	1
SMAD4	10p-Del	0.955	1
SMAD4	10q-Del	0.955	1
SMAD4	Amp_17q23.2	0.955	1
SMAD4	Amp_Xp21.1	0.955	1
SMAD4	Amp_Xq21.1	0.955	1
SMAD4	Amp_Xq25	0.955	1
TP53	16q-Del	0.955	1
XPO5	10p-Del	0.955	1
XPO5	10q-Del	0.955	1
XPO5	Amp_4q13.3	0.955	1
XPO5	Amp_17q23.2	0.955	1
XPO5	Amp_Xp21.1	0.955	1
XPO5	Amp_Xq21.1	0.955	1
XPO5	Amp_Xq25	0.955	1
3q-Amp	Del_8p23.2	0.955	1
7q-Amp	Amp_Xp22.11	0.955	1
9q-Amp	8p-Del	0.955	1
6q-Del	Amp_8p11.23	0.955	1
6q-Del	Del_11q22.3	0.955	1
8p-Del	Del_15q21.3	0.955	1
8q-Del	Del_1p31.3	0.955	1
8q-Del	Del_1q42.3	0.955	1
Amp_Xp22.11	Del_19q13.2	0.955	1
Del_1p22.1	Del_10q23.31	0.955	1
FOXA1	PTEN	0.956	1
FOXA1	Amp_1q22	0.956	1
FOXA1	Amp_16q11.2	0.956	1
PTEN	Del_6p25.1	0.956	1
3q-Amp	Del_5q11.2	0.956	1
6q-Del	Del_17p13.1	0.956	1
Amp_3q26.2	Del_16q24.1	0.956	1
Amp_Xp22.11	Del_17p13.1	0.956	1
Del_1p31.3	Del_6q14.3	0.956	1
Del_1p31.3	Del_12q24.32	0.956	1
Del_1p22.1	Del_3p13	0.956	1
Del_1q42.3	Del_12q24.32	0.956	1
Del_3p13	Del_17p13.1	0.956	1
18q-Del	Del_6q14.3	0.957	1
HRAS	16q-Del	0.958	1
TP53	8p-Amp	0.958	1
1q-Amp	8q-Amp	0.958	1
8q-Amp	22q-Del	0.958	1
16q-Del	Xp-Del	0.958	1
16q-Del	Xq-Del	0.958	1
16q-Del	Amp_13q12.11	0.958	1
16q-Del	Amp_15q11.2	0.958	1
Del_1p31.3	Del_3p13	0.958	1
Del_1p22.1	Del_16q22.3	0.958	1
ATM	Amp_7p14.3	0.959	1
MED12	Amp_3q26.2	0.959	1
7p-Amp	Del_8p23.2	0.959	1
17p-Del	Amp_7p14.3	0.959	1
Amp_7p14.3	Del_6p25.1	0.959	1
Amp_17q23.2	Del_13q22.1	0.959	1
Amp_Xp21.1	Del_13q22.1	0.959	1
Del_11q22.3	Del_21q22.2	0.959	1
BRAF	Del_1p22.1	0.96	1
BRAF	Del_12q24.32	0.96	1
CTNNB1	Del_13q14.13	0.96	1
TP53	10p-Del	0.96	1
TP53	10q-Del	0.96	1
TP53	Amp_4q13.3	0.96	1
TP53	Amp_17q23.2	0.96	1
9q-Amp	Del_1p22.1	0.96	1
13q-Del	Del_9p23	0.96	1
Xp-Del	Del_2q22.3	0.96	1
Xq-Del	Del_2q22.3	0.96	1
Amp_7p14.3	Del_16q22.3	0.96	1
Amp_7q22.1	Del_9p23	0.96	1
Amp_9q33.3	Amp_14q21.1	0.96	1
Amp_9q33.3	Amp_Xq27.1	0.96	1
Amp_13q12.11	Del_2q22.3	0.96	1
Amp_Xq27.1	Del_1p22.1	0.96	1
Del_3p13	Del_8p23.2	0.96	1
Del_12p13.1	Del_18q21.31	0.96	1
CTNNB1	Del_3p13	0.961	1
HRAS	Del_16q24.1	0.961	1
PTEN	16q-Del	0.961	1
1q-Amp	Del_16q24.1	0.961	1
1q-Amp	Del_21q22.3	0.961	1
22q-Del	Del_21q22.3	0.961	1
Del_5q21.1	Del_16q24.1	0.961	1
Del_2q22.1	Del_8p21.3	0.962	1
Del_10q23.31	Del_19q13.2	0.962	1
Del_18q23	Del_21q22.2	0.962	1
KDM6A	Del_11q23.2	0.963	1
PIK3CA	18p-Del	0.963	1
3p-Amp	13q-Del	0.963	1
7p-Amp	10q-Del	0.963	1
7p-Amp	Amp_17q23.2	0.963	1
8p-Amp	Amp_16q11.2	0.963	1
8q-Amp	17p-Del	0.963	1
10p-Del	17p-Del	0.963	1
13q-Del	Amp_12q23.1	0.963	1
13q-Del	Amp_20q13.2	0.963	1
16q-Del	Del_12p13.1	0.963	1
16q-Del	Del_15q21.3	0.963	1
17p-Del	Amp_4q13.3	0.963	1
17p-Del	Amp_Xp21.1	0.963	1
17p-Del	Amp_Xq21.1	0.963	1
17p-Del	Amp_Xq25	0.963	1
18p-Del	Amp_12q23.1	0.963	1
Amp_3q21.3	Amp_12q23.1	0.963	1
Amp_12q23.1	Del_11q23.2	0.963	1
AKT1	HRAS	0.964	1
AKT1	KLHL2	0.964	1
AKT1	1q-Amp	0.964	1
AKT1	22q-Del	0.964	1
AKT1	Xp-Del	0.964	1
AKT1	Xq-Del	0.964	1
AKT1	Amp_13q12.11	0.964	1
AKT1	Amp_15q11.2	0.964	1
ATM	Del_1q42.3	0.964	1
CTNNB1	Del_13q22.1	0.964	1
HRAS	IDH1	0.964	1
HRAS	SMAD4	0.964	1
HRAS	XPO5	0.964	1
IDH1	KLHL2	0.964	1
IDH1	1q-Amp	0.964	1
IDH1	22q-Del	0.964	1
IDH1	Xp-Del	0.964	1
IDH1	Xq-Del	0.964	1
IDH1	Amp_13q12.11	0.964	1
IDH1	Amp_15q11.2	0.964	1
KLHL2	SMAD4	0.964	1
KLHL2	XPO5	0.964	1
SMAD4	1q-Amp	0.964	1
SMAD4	22q-Del	0.964	1
SMAD4	Amp_13q12.11	0.964	1
SMAD4	Amp_15q11.2	0.964	1
SMAD4	Del_5q13.2	0.964	1
XPO5	1q-Amp	0.964	1
XPO5	22q-Del	0.964	1
XPO5	Xp-Del	0.964	1
XPO5	Xq-Del	0.964	1
XPO5	Amp_13q12.11	0.964	1
XPO5	Amp_15q11.2	0.964	1
Del_1q42.3	Del_6p25.1	0.964	1
ATM	9q-Amp	0.965	1
ATM	Amp_Xq27.1	0.965	1
CTNNB1	FOXA1	0.965	1
FOXA1	9q-Amp	0.965	1
FOXA1	Amp_14q21.1	0.965	1
HRAS	18q-Del	0.965	1
PIK3CA	Del_18q21.31	0.965	1
TP53	Del_5q13.2	0.965	1
TP53	Del_17q21.31	0.965	1
1q-Amp	18q-Del	0.965	1
9q-Amp	Del_6p25.1	0.965	1
12p-Del	Amp_8p11.23	0.965	1
17p-Del	Del_1p31.3	0.965	1
17p-Del	Del_1q42.3	0.965	1
18q-Del	Xp-Del	0.965	1
18q-Del	Xq-Del	0.965	1
22q-Del	Del_17p13.1	0.965	1
Amp_8q24.21	Del_9p23	0.965	1
Amp_12q23.1	Del_18q21.31	0.965	1
Amp_15q11.2	Del_17p13.1	0.965	1
Amp_20q13.2	Del_18q21.31	0.965	1
Amp_Xp22.11	Del_17q21.31	0.965	1
Amp_Xq27.1	Del_6p25.1	0.965	1
Del_8p23.2	Del_13q22.1	0.965	1
Del_9p23	Del_11q22.3	0.965	1
Del_11q22.3	Del_15q21.3	0.965	1
SMAD4	SPOP	0.966	1
SPOP	8p-Amp	0.966	1
8p-Amp	Del_8p21.3	0.966	1
10q-Del	Amp_7p14.3	0.966	1
18p-Del	Amp_9q33.3	0.966	1
18p-Del	Del_1p22.1	0.966	1
18p-Del	Del_12q24.32	0.966	1
Amp_3q21.3	Amp_9q33.3	0.966	1
Amp_7p14.3	Amp_17q23.2	0.966	1
Amp_8q22.1	Del_18q23	0.966	1
Amp_11q13.2	Del_8p21.3	0.966	1
Del_13q22.1	Del_18q21.31	0.966	1
KDM6A	Del_11q22.3	0.967	1
KLHL2	Del_6q14.3	0.967	1
MLL2	TP53	0.967	1
PIK3CA	Amp_8p11.23	0.967	1
PIK3CA	Amp_8q24.21	0.967	1
PIK3CA	Del_5q11.2	0.967	1
PIK3CA	Del_19q13.2	0.967	1
ZMYM3	Amp_8q22.1	0.967	1
ZMYM3	Amp_8q24.21	0.967	1
ZMYM3	Del_11q22.3	0.967	1
1q-Amp	Del_6q14.3	0.967	1
3p-Amp	Del_5q11.2	0.967	1
7q-Amp	8q-Del	0.967	1
9q-Amp	Del_2q22.1	0.967	1
8q-Del	Del_19q13.2	0.967	1
Amp_8q22.1	Amp_12q23.1	0.967	1
Amp_20q13.2	Del_5q11.2	0.967	1
Amp_20q13.2	Del_19q13.2	0.967	1
Amp_Xp22.11	Del_16q22.3	0.967	1
Del_1p31.3	Del_2q22.1	0.967	1
Del_4q28.2	Del_8p21.3	0.967	1
Del_5q13.2	Del_19q13.2	0.967	1
Del_9p23	Del_21q22.3	0.967	1
Del_15q21.3	Del_21q22.3	0.967	1
ATM	Amp_3q26.2	0.968	1
CTNNB1	Del_8p21.3	0.968	1
MLL2	Amp_16q11.2	0.968	1
PTEN	Del_21q22.3	0.968	1
3q-Amp	Amp_1q22	0.968	1
10q-Del	Del_12p13.1	0.968	1
Amp_1q22	Del_16q24.1	0.968	1
Amp_3q26.2	Del_6p25.1	0.968	1
Del_1q42.3	Del_5q21.1	0.968	1
Del_6p25.1	Del_8p23.2	0.968	1
Del_12p13.1	Del_13q22.1	0.968	1
KDM6A	Del_5q21.1	0.969	1
10p-Del	Del_1p31.3	0.969	1
10p-Del	Del_1q42.3	0.969	1
6q-Del	Amp_9q33.3	0.969	1
Amp_4q13.3	Del_1p31.3	0.969	1
Amp_7q22.1	Del_16q24.1	0.969	1
Amp_Xp22.11	Del_12q24.32	0.969	1
Amp_Xq25	Del_1p31.3	0.969	1
BRAF	8p-Amp	0.97	1
3q-Amp	17p-Del	0.97	1
Del_12p13.1	Del_21q22.2	0.97	1
AKT1	Del_3p13	0.971	1
XPO5	Del_3p13	0.971	1
ZMYM3	Del_21q22.2	0.971	1
8q-Amp	Del_4q28.2	0.971	1
12p-Del	Del_21q22.2	0.971	1
16q-Del	Del_1p22.1	0.971	1
17p-Del	Amp_3q26.2	0.971	1
18p-Del	Del_8p21.3	0.971	1
18q-Del	Amp_1q22	0.971	1
18q-Del	Amp_16q11.2	0.971	1
8q-Del	Del_21q22.2	0.971	1
Amp_7p14.3	Del_16q24.1	0.971	1
Amp_8p11.23	Del_4q28.2	0.971	1
Amp_9q33.3	Del_11q22.3	0.971	1
Amp_9q33.3	Del_18q21.31	0.971	1
Amp_11q13.2	Del_5q21.1	0.971	1
Amp_12q23.1	Del_21q22.2	0.971	1
Del_1p31.3	Del_11p11.2	0.971	1
Del_1p22.1	Del_11q22.3	0.971	1
Del_1q42.3	Del_16q22.3	0.971	1
Del_4q28.2	Del_11q22.3	0.971	1
Del_9p23	Del_21q22.2	0.971	1
Del_12q24.32	Del_18q21.31	0.971	1
Del_13q14.13	Del_15q21.3	0.971	1
PIK3CA	Del_8p21.3	0.972	1
3p-Amp	Del_8p21.3	0.972	1
17p-Del	Del_5q13.2	0.972	1
22q-Del	Del_10q23.31	0.972	1
Amp_3q26.2	Amp_Xp21.1	0.972	1
AKT1	IDH1	0.973	1
AKT1	SMAD4	0.973	1
AKT1	XPO5	0.973	1
ATM	Amp_3q21.3	0.973	1
ATM	Amp_7q22.1	0.973	1
ATM	Amp_Xp22.11	0.973	1
CTNNB1	8q-Amp	0.973	1
CTNNB1	16q-Del	0.973	1
FOXA1	13q-Del	0.973	1
HRAS	Del_16q22.3	0.973	1
IDH1	SMAD4	0.973	1
IDH1	XPO5	0.973	1
PTEN	Del_17p13.1	0.973	1
SMAD4	XPO5	0.973	1
TP53	Del_10q23.31	0.973	1
1q-Amp	Del_16q22.3	0.973	1
3q-Amp	Del_5q13.2	0.973	1
9q-Amp	Del_12p13.1	0.973	1
16q-Del	Del_5q21.1	0.973	1
22q-Del	Del_16q22.3	0.973	1
Xp-Del	Del_16q22.3	0.973	1
Xq-Del	Del_16q22.3	0.973	1
Amp_3q21.3	Del_8p23.2	0.973	1
Amp_3q26.2	Del_5q11.2	0.973	1
Amp_16q11.2	Del_17p13.1	0.973	1
Del_1q42.3	Del_8p21.3	0.973	1
Del_2q22.1	Del_6p25.1	0.973	1
MED12	12p-Del	0.974	1
MLL2	Amp_7p14.3	0.974	1
PIK3CA	12p-Del	0.974	1
PIK3CA	Del_16q24.1	0.974	1
PIK3CA	Del_21q22.3	0.974	1
ZMYM3	Del_15q21.3	0.974	1
3p-Amp	Del_9p23	0.974	1
12p-Del	18q-Del	0.974	1
12p-Del	8q-Del	0.974	1
6q-Del	8p-Del	0.974	1
8q-Del	Del_15q21.3	0.974	1
8q-Del	Del_21q22.3	0.974	1
Amp_8q22.1	Del_4q28.2	0.974	1
Amp_8q24.21	Del_4q28.2	0.974	1
Amp_12q23.1	Del_15q21.3	0.974	1
Amp_20q13.2	Del_9p23	0.974	1
Amp_20q13.2	Del_15q21.3	0.974	1
Del_1p22.1	Del_5q11.2	0.974	1
Del_5q11.2	Del_12q24.32	0.974	1
Del_5q13.2	Del_21q22.2	0.974	1
MLL2	Amp_14q21.1	0.975	1
SMAD4	Del_2q22.1	0.975	1
TP53	Amp_15q11.2	0.975	1
3q-Amp	Amp_14q21.1	0.975	1
3q-Amp	Amp_Xq27.1	0.975	1
10p-Del	Del_11q23.2	0.975	1
12p-Del	Del_9p23	0.975	1
13q-Del	Amp_17q23.2	0.975	1
13q-Del	Amp_Xp21.1	0.975	1
13q-Del	Amp_Xq21.1	0.975	1
16q-Del	Del_1q42.3	0.975	1
8p-Del	Amp_8p11.23	0.975	1
8p-Del	Amp_11q13.2	0.975	1
8p-Del	Del_19q13.2	0.975	1
Amp_7q22.1	Amp_Xp21.1	0.975	1
Amp_14q21.1	Del_2q22.3	0.975	1
Del_1q42.3	Del_13q14.13	0.975	1
17p-Del	Amp_3q21.3	0.976	1
Amp_9q33.3	Del_5q21.1	0.976	1
Amp_9q33.3	Del_21q22.2	0.976	1
Del_1p22.1	Del_21q22.2	0.976	1
ATM	7q-Amp	0.977	1
HRAS	8p-Del	0.977	1
PIK3CA	Del_1p22.1	0.977	1
PIK3CA	Del_12q24.32	0.977	1
ZMYM3	Del_17p13.1	0.977	1
1q-Amp	7p-Amp	0.977	1
1q-Amp	8p-Del	0.977	1
3p-Amp	Amp_9q33.3	0.977	1
7q-Amp	10q-Del	0.977	1
7q-Amp	Amp_17q23.2	0.977	1
7q-Amp	Del_6p25.1	0.977	1
8p-Amp	6q-Del	0.977	1
8p-Amp	Amp_Xp22.11	0.977	1
8p-Amp	Del_13q14.13	0.977	1
10p-Del	Del_11q22.3	0.977	1
13q-Del	Del_6q14.3	0.977	1
13q-Del	Del_18q21.31	0.977	1
17p-Del	22q-Del	0.977	1
18q-Del	Del_17q21.31	0.977	1
6q-Del	Del_11p11.2	0.977	1
8p-Del	Amp_15q11.2	0.977	1
Amp_8p11.23	Amp_17q23.2	0.977	1
Amp_8p11.23	Amp_Xp21.1	0.977	1
Amp_12q23.1	Del_4q28.2	0.977	1
Amp_17q23.2	Del_11q22.3	0.977	1
Amp_17q23.2	Del_19q13.2	0.977	1
Amp_20q13.2	Del_1p22.1	0.977	1
Amp_20q13.2	Del_12q24.32	0.977	1
Amp_Xp21.1	Del_19q13.2	0.977	1
Amp_Xq25	Del_19q13.2	0.977	1
Del_16q22.3	Del_17q21.31	0.977	1
ATM	8q-Amp	0.978	1
SMAD4	8q-Amp	0.978	1
SMAD4	16q-Del	0.978	1
XPO5	16q-Del	0.978	1
ZMYM3	Del_17q21.31	0.978	1
3p-Amp	Del_5q13.2	0.978	1
3p-Amp	Del_6q14.3	0.978	1
8p-Amp	13q-Del	0.978	1
8p-Amp	Amp_3q21.3	0.978	1
10p-Del	Del_13q14.13	0.978	1
10q-Del	Del_13q14.13	0.978	1
13q-Del	Del_11p11.2	0.978	1
6q-Del	Del_2q22.1	0.978	1
8q-Del	Del_17q21.31	0.978	1
Amp_12q23.1	Del_5q13.2	0.978	1
Amp_20q13.2	Del_5q13.2	0.978	1
Del_1q42.3	Del_2q22.3	0.978	1
XPO5	Del_13q14.13	0.979	1
1q-Amp	Amp_7p14.3	0.979	1
13q-Del	Del_2q22.1	0.979	1
13q-Del	Del_5q11.2	0.979	1
Amp_3q26.2	Del_16q22.3	0.979	1
Amp_8q22.1	Del_18q21.31	0.979	1
Amp_8q24.21	Del_11q23.2	0.979	1
Del_3p13	Del_19q13.2	0.979	1
Del_5q11.2	Del_11q23.2	0.979	1
Del_5q13.2	Del_13q22.1	0.979	1
Del_13q14.13	Del_19q13.2	0.979	1
ATM	Del_18q21.31	0.98	1
7p-Amp	Del_11q22.3	0.98	1
8p-Amp	Del_2q22.1	0.98	1
8q-Amp	Amp_3q26.2	0.98	1
10q-Del	Del_21q22.2	0.98	1
12p-Del	Amp_9q33.3	0.98	1
12p-Del	Del_12q24.32	0.98	1
16q-Del	Amp_3q26.2	0.98	1
18q-Del	Amp_9q33.3	0.98	1
18q-Del	Amp_14q21.1	0.98	1
18q-Del	Del_12q24.32	0.98	1
Amp_9q33.3	Del_9p23	0.98	1
Del_1p31.3	Del_16q24.1	0.98	1
Del_6p25.1	Del_21q22.2	0.98	1
AKT1	Del_8p23.2	0.981	1
ATM	8q-Del	0.981	1
FOXA1	Amp_8q22.1	0.981	1
FOXA1	Del_2q22.3	0.981	1
KLHL2	Del_1q42.3	0.981	1
PTEN	Del_5q21.1	0.981	1
TP53	Del_16q24.1	0.981	1
1q-Amp	Del_1q42.3	0.981	1
1q-Amp	Del_13q22.1	0.981	1
3p-Amp	Del_6p25.1	0.981	1
3q-Amp	Amp_Xp22.11	0.981	1
8p-Amp	Del_8p23.2	0.981	1
22q-Del	Del_1p31.3	0.981	1
22q-Del	Del_1q42.3	0.981	1
8q-Del	Del_6p25.1	0.981	1
Amp_4q13.3	Del_8p23.2	0.981	1
Amp_4q13.3	Del_18q21.31	0.981	1
Amp_11q13.2	Del_13q22.1	0.981	1
Amp_13q12.11	Del_13q22.1	0.981	1
Amp_20q13.2	Del_6p25.1	0.981	1
PIK3CA	Del_10q23.31	0.982	1
1q-Amp	Del_8p21.3	0.982	1
7p-Amp	Del_16q22.3	0.982	1
8p-Amp	Del_11q22.3	0.982	1
8p-Amp	Del_16q22.3	0.982	1
8q-Amp	6q-Del	0.982	1
10p-Del	12p-Del	0.982	1
10q-Del	Del_9p23	0.982	1
12p-Del	Amp_Xq25	0.982	1
12p-Del	Del_10q23.31	0.982	1
22q-Del	Del_8p21.3	0.982	1
Amp_4q13.3	Del_5q11.2	0.982	1
Amp_4q13.3	Del_9p23	0.982	1
Amp_8p11.23	Del_11p11.2	0.982	1
Amp_8q22.1	Amp_Xp21.1	0.982	1
Amp_17q23.2	Del_9p23	0.982	1
Amp_Xq21.1	Del_9p23	0.982	1
Amp_Xq25	Del_5q11.2	0.982	1
Del_11p11.2	Del_11q22.3	0.982	1
Del_13q22.1	Del_19q13.2	0.982	1
CTNNB1	PTEN	0.983	1
CTNNB1	Amp_1q22	0.983	1
MLL2	18p-Del	0.983	1
PIK3CA	8p-Amp	0.983	1
3p-Amp	8p-Amp	0.983	1
9q-Amp	Amp_16q11.2	0.983	1
13q-Del	Del_18q23	0.983	1
6q-Del	Del_8p23.2	0.983	1
8q-Del	Del_16q22.3	0.983	1
Amp_1q22	Del_18q23	0.983	1
Amp_3q26.2	Amp_13q12.11	0.983	1
Amp_9q33.3	Del_1p22.1	0.983	1
Amp_9q33.3	Del_4q28.2	0.983	1
Amp_14q21.1	Amp_16q11.2	0.983	1
Amp_16q11.2	Del_18q23	0.983	1
Amp_20q13.2	Del_11p11.2	0.983	1
Amp_Xp22.11	Del_8p23.2	0.983	1
Del_1p22.1	Del_4q28.2	0.983	1
Del_1p22.1	Del_17p13.1	0.983	1
Del_5q11.2	Del_10q23.31	0.983	1
Del_6p25.1	Del_8p21.3	0.983	1
Del_12q24.32	Del_17p13.1	0.983	1
Del_15q21.3	Del_16q22.3	0.983	1
ATM	Del_9p23	0.984	1
HRAS	18p-Del	0.984	1
KLHL2	13q-Del	0.984	1
ZMYM3	Del_3p13	0.984	1
1q-Amp	Amp_3q21.3	0.984	1
8q-Amp	13q-Del	0.984	1
8q-Amp	Del_11q23.2	0.984	1
13q-Del	16q-Del	0.984	1
13q-Del	Xp-Del	0.984	1
13q-Del	Xq-Del	0.984	1
13q-Del	Amp_13q12.11	0.984	1
13q-Del	Del_10q23.31	0.984	1
16q-Del	Amp_3q21.3	0.984	1
17p-Del	Amp_8q24.21	0.984	1
18p-Del	22q-Del	0.984	1
Xp-Del	Del_11q23.2	0.984	1
Xq-Del	Del_11q23.2	0.984	1
Amp_3q21.3	Amp_13q12.11	0.984	1
Amp_4q13.3	Del_18q23	0.984	1
Amp_11q13.2	Amp_Xp22.11	0.984	1
Amp_Xp21.1	Del_18q23	0.984	1
Del_2q22.1	Del_11q22.3	0.984	1
Del_6p25.1	Del_15q21.3	0.984	1
Del_6q14.3	Del_18q21.31	0.984	1
ATM	18q-Del	0.985	1
ATM	Del_13q22.1	0.985	1
ATM	Del_18q23	0.985	1
8q-Amp	Del_17p13.1	0.985	1
10p-Del	Del_1p22.1	0.985	1
10q-Del	Del_12q24.32	0.985	1
13q-Del	Del_16q22.3	0.985	1
Amp_4q13.3	Amp_9q33.3	0.985	1
Amp_8q22.1	Del_5q21.1	0.985	1
Amp_8q22.1	Del_19q13.2	0.985	1
Amp_9q33.3	Amp_Xq25	0.985	1
Amp_17q23.2	Del_1p22.1	0.985	1
Amp_Xp21.1	Del_12q24.32	0.985	1
Amp_Xq25	Del_1p22.1	0.985	1
Amp_Xq25	Del_12q24.32	0.985	1
Del_1q42.3	Del_17p13.1	0.985	1
Del_4q28.2	Del_12p13.1	0.985	1
Del_5q11.2	Del_11q22.3	0.985	1
Del_11q23.2	Del_12p13.1	0.985	1
Del_11q23.2	Del_16q22.3	0.985	1
Del_12p13.1	Del_12q24.32	0.985	1
MED12	3q-Amp	0.986	1
MLL2	ZMYM3	0.986	1
TP53	Del_15q21.3	0.986	1
1q-Amp	7q-Amp	0.986	1
1q-Amp	Amp_8p11.23	0.986	1
8q-Amp	Del_6q14.3	0.986	1
13q-Del	Amp_3q26.2	0.986	1
18p-Del	Del_2q22.3	0.986	1
18q-Del	6q-Del	0.986	1
22q-Del	Amp_8p11.23	0.986	1
22q-Del	Del_11q22.3	0.986	1
8p-Del	Amp_16q11.2	0.986	1
Xp-Del	Amp_8p11.23	0.986	1
Xq-Del	Amp_8p11.23	0.986	1
Amp_1q22	Amp_7p14.3	0.986	1
Amp_8p11.23	Amp_13q12.11	0.986	1
Amp_8p11.23	Del_5q21.1	0.986	1
Amp_9q33.3	Del_5q13.2	0.986	1
Amp_13q12.11	Del_11q22.3	0.986	1
Amp_14q21.1	Del_6q14.3	0.986	1
Amp_15q11.2	Del_11q22.3	0.986	1
Del_1p22.1	Del_5q13.2	0.986	1
Del_1q42.3	Del_11q22.3	0.986	1
Del_1q42.3	Del_19q13.2	0.986	1
Del_2q22.1	Del_16q24.1	0.986	1
Del_5q21.1	Del_11q22.3	0.986	1
ATM	10p-Del	0.987	1
ATM	10q-Del	0.987	1
ATM	Amp_9q33.3	0.987	1
ATM	Amp_Xp21.1	0.987	1
ATM	Amp_Xq21.1	0.987	1
ATM	Del_16q24.1	0.987	1
BRAF	CTNNB1	0.987	1
FOXA1	10p-Del	0.987	1
FOXA1	Amp_4q13.3	0.987	1
PTEN	Del_1p31.3	0.987	1
PTEN	Del_1q42.3	0.987	1
SMAD4	TP53	0.987	1
7p-Amp	Del_16q24.1	0.987	1
9q-Amp	Amp_Xq27.1	0.987	1
10p-Del	Del_6p25.1	0.987	1
8p-Del	Del_5q13.2	0.987	1
Amp_3q26.2	Del_5q13.2	0.987	1
Amp_8q22.1	Amp_14q21.1	0.987	1
Amp_17q23.2	Del_6p25.1	0.987	1
Amp_20q13.2	Del_2q22.1	0.987	1
Amp_Xq25	Del_6p25.1	0.987	1
AKT1	7p-Amp	0.988	1
PIK3CA	Amp_11q13.2	0.988	1
SMAD4	7p-Amp	0.988	1
SMAD4	17p-Del	0.988	1
SMAD4	Del_16q24.1	0.988	1
SPOP	Amp_3q26.2	0.988	1
SPOP	Del_12q24.32	0.988	1
TP53	17p-Del	0.988	1
XPO5	Del_21q22.3	0.988	1
3p-Amp	Amp_11q13.2	0.988	1
7p-Amp	Del_9p23	0.988	1
8q-Amp	Del_5q13.2	0.988	1
9q-Amp	Del_5q21.1	0.988	1
13q-Del	Amp_3q21.3	0.988	1
16q-Del	Del_5q13.2	0.988	1
17p-Del	Del_9p23	0.988	1
22q-Del	Del_21q22.2	0.988	1
6q-Del	Del_8p21.3	0.988	1
8p-Del	Del_6q14.3	0.988	1
8p-Del	Del_9p23	0.988	1
Amp_3q21.3	Del_11q23.2	0.988	1
Amp_3q26.2	Del_8p23.2	0.988	1
Amp_8q24.21	Del_6q14.3	0.988	1
Amp_11q13.2	Amp_12q23.1	0.988	1
Amp_13q12.11	Del_21q22.2	0.988	1
Amp_Xq21.1	Del_17q21.31	0.988	1
Amp_Xq25	Del_5q13.2	0.988	1
Del_3p13	Del_15q21.3	0.988	1
HRAS	Del_9p23	0.989	1
HRAS	Del_15q21.3	0.989	1
PIK3CA	16q-Del	0.989	1
ZMYM3	16q-Del	0.989	1
1q-Amp	Del_9p23	0.989	1
3p-Amp	8q-Amp	0.989	1
3p-Amp	16q-Del	0.989	1
7p-Amp	9q-Amp	0.989	1
7q-Amp	Amp_11q13.2	0.989	1
7q-Amp	Del_2q22.3	0.989	1
8p-Amp	Amp_4q13.3	0.989	1
8p-Amp	Amp_9q33.3	0.989	1
8p-Amp	Del_5q21.1	0.989	1
8p-Amp	Del_12q24.32	0.989	1
8q-Amp	Amp_20q13.2	0.989	1
8q-Amp	Del_18q21.31	0.989	1
9q-Amp	17p-Del	0.989	1
10p-Del	Del_11p11.2	0.989	1
10p-Del	Del_16q24.1	0.989	1
10q-Del	Del_11p11.2	0.989	1
12p-Del	22q-Del	0.989	1
12p-Del	Xp-Del	0.989	1
12p-Del	Xq-Del	0.989	1
16q-Del	Del_18q21.31	0.989	1
17p-Del	Amp_14q21.1	0.989	1
22q-Del	Del_15q21.3	0.989	1
Xp-Del	Del_15q21.3	0.989	1
Xq-Del	Del_15q21.3	0.989	1
Amp_1q22	Amp_3q26.2	0.989	1
Amp_1q22	Del_13q22.1	0.989	1
Amp_3q26.2	Amp_8p11.23	0.989	1
Amp_4q13.3	Del_11p11.2	0.989	1
Amp_9q33.3	Del_11p11.2	0.989	1
Del_1p22.1	Del_11p11.2	0.989	1
Del_3p13	Del_12p13.1	0.989	1
Del_4q28.2	Del_16q22.3	0.989	1
Del_11p11.2	Del_12q24.32	0.989	1
Del_11q22.3	Del_12p13.1	0.989	1
AKT1	Del_1p31.3	0.99	1
ATM	Del_12p13.1	0.99	1
ATM	Del_13q14.13	0.99	1
BRAF	Amp_Xp22.11	0.99	1
FOXA1	Del_13q14.13	0.99	1
PIK3CA	Del_2q22.3	0.99	1
PIK3CA	Del_13q22.1	0.99	1
SMAD4	Del_17p13.1	0.99	1
8p-Amp	Del_13q22.1	0.99	1
9q-Amp	6q-Del	0.99	1
9q-Amp	Amp_7p14.3	0.99	1
9q-Amp	Amp_Xp22.11	0.99	1
13q-Del	18q-Del	0.99	1
18q-Del	Del_13q22.1	0.99	1
6q-Del	Amp_Xq27.1	0.99	1
Amp_12q23.1	Del_2q22.3	0.99	1
Amp_14q21.1	Amp_Xp22.11	0.99	1
Amp_20q13.2	Del_13q22.1	0.99	1
Del_1p31.3	Del_18q21.31	0.99	1
Del_2q22.3	Del_12p13.1	0.99	1
Del_6p25.1	Del_17q21.31	0.99	1
FOXA1	SPOP	0.991	1
KDM6A	PTEN	0.991	1
MLL2	Amp_17q23.2	0.991	1
MLL2	Amp_Xp21.1	0.991	1
PIK3CA	Amp_16q11.2	0.991	1
PTEN	ZMYM3	0.991	1
ZMYM3	Amp_16q11.2	0.991	1
1q-Amp	Del_4q28.2	0.991	1
1q-Amp	Del_12q24.32	0.991	1
3p-Amp	Amp_1q22	0.991	1
3q-Amp	Amp_17q23.2	0.991	1
3q-Amp	Amp_Xp21.1	0.991	1
10q-Del	Del_6q14.3	0.991	1
12p-Del	Del_1q42.3	0.991	1
13q-Del	Amp_1q22	0.991	1
13q-Del	Amp_8p11.23	0.991	1
13q-Del	Del_19q13.2	0.991	1
17p-Del	Amp_9q33.3	0.991	1
17p-Del	Del_12q24.32	0.991	1
18p-Del	Del_19q13.2	0.991	1
18p-Del	Del_21q22.3	0.991	1
Amp_1q22	Amp_12q23.1	0.991	1
Amp_1q22	Amp_20q13.2	0.991	1
Amp_3q26.2	Del_6q14.3	0.991	1
Amp_12q23.1	Amp_16q11.2	0.991	1
Amp_13q12.11	Del_4q28.2	0.991	1
Amp_17q23.2	Del_17p13.1	0.991	1
Del_1p31.3	Del_15q21.3	0.991	1
Del_1q42.3	Del_15q21.3	0.991	1
Del_2q22.3	Del_18q21.31	0.991	1
Del_8p21.3	Del_21q22.2	0.991	1
Del_12p13.1	Del_16q22.3	0.991	1
Del_15q21.3	Del_18q21.31	0.991	1
AKT1	Amp_7q22.1	0.992	1
ATM	1q-Amp	0.992	1
ATM	22q-Del	0.992	1
ATM	Xp-Del	0.992	1
ATM	Xq-Del	0.992	1
FOXA1	KLHL2	0.992	1
FOXA1	8p-Amp	0.992	1
FOXA1	Xp-Del	0.992	1
FOXA1	Xq-Del	0.992	1
FOXA1	Amp_13q12.11	0.992	1
SMAD4	13q-Del	0.992	1
SMAD4	Amp_7q22.1	0.992	1
SMAD4	Del_11q23.2	0.992	1
SMAD4	Del_16q22.3	0.992	1
XPO5	13q-Del	0.992	1
XPO5	Del_11q23.2	0.992	1
1q-Amp	Amp_8q24.21	0.992	1
3q-Amp	Amp_8q24.21	0.992	1
3q-Amp	Amp_9q33.3	0.992	1
8p-Amp	Del_16q24.1	0.992	1
12p-Del	Del_5q11.2	0.992	1
18p-Del	Del_8p23.2	0.992	1
18q-Del	Del_19q13.2	0.992	1
18q-Del	Del_21q22.3	0.992	1
22q-Del	Amp_8q22.1	0.992	1
22q-Del	Amp_8q24.21	0.992	1
22q-Del	Del_6p25.1	0.992	1
Xp-Del	Amp_8q22.1	0.992	1
Xp-Del	Amp_8q24.21	0.992	1
Xq-Del	Amp_8q22.1	0.992	1
Xq-Del	Amp_8q24.21	0.992	1
Amp_4q13.3	Amp_11q13.2	0.992	1
Amp_8p11.23	Amp_16q11.2	0.992	1
Amp_8q24.21	Amp_13q12.11	0.992	1
Amp_11q13.2	Amp_Xp21.1	0.992	1
Amp_13q12.11	Del_6p25.1	0.992	1
Amp_16q11.2	Del_11q22.3	0.992	1
Del_1p31.3	Del_16q22.3	0.992	1
Del_6q14.3	Del_8p23.2	0.992	1
AKT1	7q-Amp	0.993	1
AKT1	8p-Del	0.993	1
AKT1	Del_19q13.2	0.993	1
BRAF	SPOP	0.993	1
CTNNB1	KDM6A	0.993	1
CTNNB1	Del_17q21.31	0.993	1
KDM6A	Amp_Xq27.1	0.993	1
MED12	Amp_Xq27.1	0.993	1
SMAD4	7q-Amp	0.993	1
SMAD4	Del_11q22.3	0.993	1
1q-Amp	8p-Amp	0.993	1
3p-Amp	Amp_Xq27.1	0.993	1
3p-Amp	Del_13q14.13	0.993	1
7p-Amp	Del_6p25.1	0.993	1
7q-Amp	Amp_8p11.23	0.993	1
8p-Amp	Amp_13q12.11	0.993	1
8p-Amp	Del_11p11.2	0.993	1
8q-Amp	Del_9p23	0.993	1
8q-Amp	Del_16q22.3	0.993	1
8q-Amp	Del_16q24.1	0.993	1
9q-Amp	Amp_20q13.2	0.993	1
9q-Amp	Del_5q13.2	0.993	1
9q-Amp	Del_13q14.13	0.993	1
10p-Del	Del_10q23.31	0.993	1
10p-Del	Del_16q22.3	0.993	1
12p-Del	Del_17p13.1	0.993	1
16q-Del	Del_18q23	0.993	1
17p-Del	Amp_Xp22.11	0.993	1
17p-Del	Del_13q22.1	0.993	1
18p-Del	Del_21q22.2	0.993	1
6q-Del	Del_5q11.2	0.993	1
8p-Del	Amp_9q33.3	0.993	1
Amp_3q26.2	Amp_14q21.1	0.993	1
Amp_4q13.3	Del_8p21.3	0.993	1
Amp_9q33.3	Del_1p31.3	0.993	1
Amp_11q13.2	Del_9p23	0.993	1
Amp_12q23.1	Del_12p13.1	0.993	1
Amp_13q12.11	Del_11p11.2	0.993	1
Amp_17q23.2	Del_8p21.3	0.993	1
Amp_20q13.2	Amp_Xq27.1	0.993	1
Amp_20q13.2	Del_13q14.13	0.993	1
Amp_Xq21.1	Del_10q23.31	0.993	1
Del_1q42.3	Del_18q23	0.993	1
Del_2q22.1	Del_12p13.1	0.993	1
Del_5q13.2	Del_11q22.3	0.993	1
Del_6p25.1	Del_10q23.31	0.993	1
Del_10q23.31	Del_21q22.2	0.993	1
Del_13q14.13	Del_18q23	0.993	1
Del_15q21.3	Del_17p13.1	0.993	1
KLHL2	Del_13q14.13	0.994	1
MLL2	Amp_15q11.2	0.994	1
PIK3CA	6q-Del	0.994	1
PIK3CA	Del_8p23.2	0.994	1
SMAD4	Del_15q21.3	0.994	1
TP53	Del_18q21.31	0.994	1
XPO5	Del_9p23	0.994	1
8p-Amp	Del_17p13.1	0.994	1
8q-Amp	Amp_4q13.3	0.994	1
8q-Amp	Amp_17q23.2	0.994	1
9q-Amp	Amp_7q22.1	0.994	1
9q-Amp	Del_8p23.2	0.994	1
9q-Amp	Del_13q22.1	0.994	1
12p-Del	18p-Del	0.994	1
16q-Del	Amp_4q13.3	0.994	1
18p-Del	Amp_14q21.1	0.994	1
18p-Del	Del_15q21.3	0.994	1
6q-Del	Del_1p31.3	0.994	1
6q-Del	Del_5q21.1	0.994	1
Amp_3q21.3	Amp_14q21.1	0.994	1
Amp_3q26.2	Del_5q21.1	0.994	1
Amp_4q13.3	Amp_16q11.2	0.994	1
Amp_12q23.1	Del_8p23.2	0.994	1
Amp_14q21.1	Del_11q23.2	0.994	1
Amp_20q13.2	Del_8p23.2	0.994	1
Del_1p22.1	Del_18q21.31	0.994	1
Del_5q11.2	Del_16q22.3	0.994	1
Del_6q14.3	Del_11q23.2	0.994	1
Del_8p23.2	Del_9p23	0.994	1
Del_8p23.2	Del_15q21.3	0.994	1
Del_9p23	Del_11q23.2	0.994	1
Del_11q22.3	Del_13q14.13	0.994	1
Del_11q23.2	Del_13q22.1	0.994	1
Del_13q22.1	Del_17p13.1	0.994	1
Del_19q13.2	Del_21q22.2	0.994	1
AKT1	Del_1p22.1	0.995	1
AKT1	Del_12q24.32	0.995	1
BRAF	Amp_Xq21.1	0.995	1
BRAF	Amp_Xq25	0.995	1
CTNNB1	Amp_4q13.3	0.995	1
HRAS	Del_5q13.2	0.995	1
SPOP	Xp-Del	0.995	1
SPOP	Xq-Del	0.995	1
1q-Amp	Del_5q13.2	0.995	1
1q-Amp	Del_8p23.2	0.995	1
7q-Amp	9q-Amp	0.995	1
7q-Amp	Del_9p23	0.995	1
8p-Amp	17p-Del	0.995	1
8p-Amp	Del_6q14.3	0.995	1
9q-Amp	Amp_17q23.2	0.995	1
9q-Amp	Amp_Xq25	0.995	1
10p-Del	8p-Del	0.995	1
10q-Del	8p-Del	0.995	1
13q-Del	Amp_8q24.21	0.995	1
17p-Del	Del_16q22.3	0.995	1
18p-Del	Del_5q11.2	0.995	1
18q-Del	Del_2q22.3	0.995	1
18q-Del	Del_13q14.13	0.995	1
22q-Del	Del_8p23.2	0.995	1
6q-Del	Amp_3q26.2	0.995	1
Amp_1q22	Del_9p23	0.995	1
Amp_3q26.2	Amp_9q33.3	0.995	1
Amp_3q26.2	Amp_Xp22.11	0.995	1
Amp_3q26.2	Del_2q22.1	0.995	1
Amp_3q26.2	Del_4q28.2	0.995	1
Amp_3q26.2	Del_12q24.32	0.995	1
Amp_8q22.1	Del_6q14.3	0.995	1
Amp_8q22.1	Del_12q24.32	0.995	1
Amp_8q24.21	Del_5q21.1	0.995	1
Amp_8q24.21	Del_17p13.1	0.995	1
Amp_11q13.2	Del_8p23.2	0.995	1
Amp_14q21.1	Amp_17q23.2	0.995	1
Amp_14q21.1	Amp_Xp21.1	0.995	1
Amp_17q23.2	Amp_Xq27.1	0.995	1
Amp_Xq25	Amp_Xq27.1	0.995	1
Del_1p22.1	Del_5q21.1	0.995	1
Del_2q22.3	Del_16q22.3	0.995	1
Del_2q22.3	Del_16q24.1	0.995	1
Del_4q28.2	Del_5q11.2	0.995	1
Del_4q28.2	Del_16q24.1	0.995	1
Del_5q21.1	Del_12q24.32	0.995	1
Del_9p23	Del_12p13.1	0.995	1
Del_12p13.1	Del_15q21.3	0.995	1
Del_13q14.13	Del_17q21.31	0.995	1
Del_18q23	Del_21q22.3	0.995	1
AKT1	Del_6p25.1	0.996	1
KLHL2	PTEN	0.996	1
MED12	3p-Amp	0.996	1
PIK3CA	Amp_20q13.2	0.996	1
SMAD4	8p-Amp	0.996	1
SMAD4	Del_11p11.2	0.996	1
SMAD4	Del_12p13.1	0.996	1
TP53	8p-Del	0.996	1
TP53	Del_19q13.2	0.996	1
7q-Amp	Del_6q14.3	0.996	1
7q-Amp	Del_8p21.3	0.996	1
8p-Amp	Amp_11q13.2	0.996	1
10p-Del	6q-Del	0.996	1
10p-Del	Del_13q22.1	0.996	1
10q-Del	Del_13q22.1	0.996	1
12p-Del	Del_5q13.2	0.996	1
12p-Del	Del_17q21.31	0.996	1
13q-Del	17p-Del	0.996	1
13q-Del	Amp_9q33.3	0.996	1
13q-Del	Del_5q21.1	0.996	1
16q-Del	Del_2q22.1	0.996	1
16q-Del	Del_6q14.3	0.996	1
17p-Del	8q-Del	0.996	1
17p-Del	Amp_8q22.1	0.996	1
17p-Del	Del_5q11.2	0.996	1
18p-Del	Del_10q23.31	0.996	1
18q-Del	Amp_4q13.3	0.996	1
18q-Del	Del_15q21.3	0.996	1
22q-Del	Del_3p13	0.996	1
6q-Del	Amp_17q23.2	0.996	1
6q-Del	Amp_Xq25	0.996	1
Amp_3q21.3	Del_12q24.32	0.996	1
Amp_3q26.2	Del_13q14.13	0.996	1
Amp_7p14.3	Del_8p21.3	0.996	1
Amp_7q22.1	Amp_Xp22.11	0.996	1
Amp_8q22.1	Del_2q22.1	0.996	1
Amp_8q22.1	Del_13q22.1	0.996	1
Amp_8q24.21	Del_13q22.1	0.996	1
Amp_9q33.3	Del_13q14.13	0.996	1
Amp_13q12.11	Amp_16q11.2	0.996	1
Amp_15q11.2	Amp_16q11.2	0.996	1
Amp_16q11.2	Del_12q24.32	0.996	1
Amp_17q23.2	Amp_Xp22.11	0.996	1
Del_1p31.3	Del_2q22.3	0.996	1
Del_2q22.1	Del_16q22.3	0.996	1
Del_5q13.2	Del_9p23	0.996	1
Del_6q14.3	Del_11q22.3	0.996	1
Del_15q21.3	Del_17q21.31	0.996	1
Del_16q24.1	Del_17q21.31	0.996	1
ATM	Amp_8q22.1	0.997	1
ATM	Amp_16q11.2	0.997	1
ATM	Del_8p21.3	0.997	1
FOXA1	7q-Amp	0.997	1
FOXA1	16q-Del	0.997	1
FOXA1	Amp_8q24.21	0.997	1
MED12	10p-Del	0.997	1
PIK3CA	Amp_8q22.1	0.997	1
PIK3CA	Amp_Xq25	0.997	1
ZMYM3	Amp_17q23.2	0.997	1
3p-Amp	Amp_17q23.2	0.997	1
3q-Amp	Amp_11q13.2	0.997	1
3q-Amp	Del_8p21.3	0.997	1
8p-Amp	Amp_1q22	0.997	1
8q-Amp	Xp-Del	0.997	1
8q-Amp	Xq-Del	0.997	1
8q-Amp	Amp_13q12.11	0.997	1
8q-Amp	Amp_14q21.1	0.997	1
9q-Amp	16q-Del	0.997	1
9q-Amp	22q-Del	0.997	1
9q-Amp	Amp_13q12.11	0.997	1
9q-Amp	Del_4q28.2	0.997	1
10p-Del	Amp_12q23.1	0.997	1
13q-Del	Amp_7p14.3	0.997	1
13q-Del	Del_6p25.1	0.997	1
17p-Del	Del_19q13.2	0.997	1
18q-Del	Del_1q42.3	0.997	1
22q-Del	Amp_Xq27.1	0.997	1
6q-Del	Del_19q13.2	0.997	1
8p-Del	Del_5q11.2	0.997	1
8q-Del	Amp_Xq21.1	0.997	1
8q-Del	Del_16q24.1	0.997	1
Xp-Del	Del_2q22.1	0.997	1
Xp-Del	Del_16q24.1	0.997	1
Xq-Del	Del_2q22.1	0.997	1
Xq-Del	Del_16q24.1	0.997	1
Amp_1q22	Amp_8q22.1	0.997	1
Amp_1q22	Del_5q11.2	0.997	1
Amp_3q26.2	Del_11p11.2	0.997	1
Amp_7p14.3	Del_5q11.2	0.997	1
Amp_8p11.23	Amp_9q33.3	0.997	1
Amp_8p11.23	Del_5q11.2	0.997	1
Amp_8q22.1	Del_11q22.3	0.997	1
Amp_8q24.21	Amp_12q23.1	0.997	1
Amp_12q23.1	Del_5q11.2	0.997	1
Amp_12q23.1	Del_5q21.1	0.997	1
Amp_12q23.1	Del_16q24.1	0.997	1
Amp_13q12.11	Amp_14q21.1	0.997	1
Amp_20q13.2	Amp_Xq25	0.997	1
Amp_20q13.2	Del_5q21.1	0.997	1
Del_5q13.2	Del_18q23	0.997	1
Del_6p25.1	Del_21q22.3	0.997	1
Del_8p23.2	Del_12q24.32	0.997	1
Del_8p23.2	Del_17q21.31	0.997	1
Del_9p23	Del_15q21.3	0.997	1
Del_13q14.13	Del_18q21.31	0.997	1
ATM	12p-Del	0.998	1
ATM	6q-Del	0.998	1
BRAF	IDH1	0.998	1
BRAF	XPO5	0.998	1
CTNNB1	SMAD4	0.998	1
CTNNB1	XPO5	0.998	1
CTNNB1	8p-Amp	0.998	1
FOXA1	6q-Del	0.998	1
FOXA1	Del_6q14.3	0.998	1
HRAS	8q-Del	0.998	1
PTEN	Del_13q14.13	0.998	1
SMAD4	Amp_1q22	0.998	1
SMAD4	Del_5q11.2	0.998	1
SMAD4	Del_5q21.1	0.998	1
SMAD4	Del_18q23	0.998	1
SPOP	3p-Amp	0.998	1
SPOP	Amp_3q21.3	0.998	1
SPOP	Del_13q22.1	0.998	1
TP53	12p-Del	0.998	1
TP53	Del_16q22.3	0.998	1
ZMYM3	Amp_15q11.2	0.998	1
ZMYM3	Del_19q13.2	0.998	1
1q-Amp	6q-Del	0.998	1
1q-Amp	Amp_Xp22.11	0.998	1
3p-Amp	Amp_8p11.23	0.998	1
3q-Amp	13q-Del	0.998	1
3q-Amp	Del_13q14.13	0.998	1
7p-Amp	16q-Del	0.998	1
7p-Amp	Amp_11q13.2	0.998	1
7p-Amp	Amp_Xp21.1	0.998	1
7q-Amp	16q-Del	0.998	1
7q-Amp	Amp_20q13.2	0.998	1
7q-Amp	Del_11p11.2	0.998	1
8p-Amp	9q-Amp	0.998	1
8p-Amp	16q-Del	0.998	1
8q-Amp	Amp_Xp22.11	0.998	1
8q-Amp	Del_11p11.2	0.998	1
9q-Amp	Del_11p11.2	0.998	1
9q-Amp	Del_16q24.1	0.998	1
10q-Del	17p-Del	0.998	1
10q-Del	Amp_Xq21.1	0.998	1
10q-Del	Del_1p31.3	0.998	1
13q-Del	8p-Del	0.998	1
13q-Del	8q-Del	0.998	1
13q-Del	Del_8p21.3	0.998	1
13q-Del	Del_16q24.1	0.998	1
16q-Del	Del_2q22.3	0.998	1
16q-Del	Del_5q11.2	0.998	1
17p-Del	Del_21q22.2	0.998	1
18p-Del	8q-Del	0.998	1
18p-Del	Del_1p31.3	0.998	1
18p-Del	Del_5q13.2	0.998	1
18q-Del	22q-Del	0.998	1
22q-Del	6q-Del	0.998	1
22q-Del	Amp_20q13.2	0.998	1
6q-Del	Del_1p22.1	0.998	1
6q-Del	Del_4q28.2	0.998	1
6q-Del	Del_6p25.1	0.998	1
8p-Del	Del_13q22.1	0.998	1
8p-Del	Del_21q22.3	0.998	1
8q-Del	Amp_13q12.11	0.998	1
Xp-Del	Del_6q14.3	0.998	1
Xq-Del	Del_6q14.3	0.998	1
Amp_3q21.3	Amp_20q13.2	0.998	1
Amp_3q21.3	Del_5q13.2	0.998	1
Amp_3q21.3	Del_8p21.3	0.998	1
Amp_3q21.3	Del_11p11.2	0.998	1
Amp_3q21.3	Del_13q14.13	0.998	1
Amp_3q26.2	Del_13q22.1	0.998	1
Amp_4q13.3	Amp_7p14.3	0.998	1
Amp_4q13.3	Amp_17q23.2	0.998	1
Amp_4q13.3	Del_13q14.13	0.998	1
Amp_7p14.3	Amp_11q13.2	0.998	1
Amp_7p14.3	Amp_Xp21.1	0.998	1
Amp_7q22.1	Del_2q22.3	0.998	1
Amp_7q22.1	Del_5q13.2	0.998	1
Amp_7q22.1	Del_8p21.3	0.998	1
Amp_8q22.1	Del_11p11.2	0.998	1
Amp_8q24.21	Del_11p11.2	0.998	1
Amp_12q23.1	Del_8p21.3	0.998	1
Amp_12q23.1	Del_11q22.3	0.998	1
Amp_13q12.11	Amp_Xp22.11	0.998	1
Amp_16q11.2	Del_13q14.13	0.998	1
Amp_17q23.2	Amp_Xq25	0.998	1
Amp_17q23.2	Del_13q14.13	0.998	1
Amp_Xp21.1	Amp_Xq25	0.998	1
Amp_Xp21.1	Del_1p31.3	0.998	1
Amp_Xq21.1	Amp_Xq25	0.998	1
Del_1p31.3	Del_8p21.3	0.998	1
Del_1p31.3	Del_13q14.13	0.998	1
Del_1p31.3	Del_19q13.2	0.998	1
Del_1q42.3	Del_10q23.31	0.998	1
Del_1q42.3	Del_12p13.1	0.998	1
Del_1q42.3	Del_18q21.31	0.998	1
Del_2q22.3	Del_5q11.2	0.998	1
Del_3p13	Del_8p21.3	0.998	1
Del_3p13	Del_17q21.31	0.998	1
Del_4q28.2	Del_12q24.32	0.998	1
Del_5q11.2	Del_11p11.2	0.998	1
Del_5q13.2	Del_12q24.32	0.998	1
Del_5q13.2	Del_13q14.13	0.998	1
Del_5q13.2	Del_17p13.1	0.998	1
Del_6p25.1	Del_17p13.1	0.998	1
Del_11p11.2	Del_13q22.1	0.998	1
Del_11q23.2	Del_16q24.1	0.998	1
Del_13q22.1	Del_16q22.3	0.998	1
Del_13q22.1	Del_16q24.1	0.998	1
AKT1	Amp_Xq21.1	0.999	1
AKT1	Del_17q21.31	0.999	1
ATM	Del_8p23.2	0.999	1
FOXA1	7p-Amp	0.999	1
FOXA1	Amp_7p14.3	0.999	1
FOXA1	Amp_12q23.1	0.999	1
FOXA1	Amp_20q13.2	0.999	1
FOXA1	Del_12q24.32	0.999	1
HRAS	Amp_4q13.3	0.999	1
HRAS	Del_1p31.3	0.999	1
IDH1	ZMYM3	0.999	1
PIK3CA	8q-Amp	0.999	1
PIK3CA	Del_15q21.3	0.999	1
PTEN	Del_13q22.1	0.999	1
SMAD4	Amp_4q13.3	0.999	1
SPOP	7q-Amp	0.999	1
SPOP	Amp_7p14.3	0.999	1
SPOP	Del_11p11.2	0.999	1
TP53	18p-Del	0.999	1
TP53	18q-Del	0.999	1
TP53	Del_18q23	0.999	1
XPO5	Del_17q21.31	0.999	1
1q-Amp	10p-Del	0.999	1
1q-Amp	Amp_Xp21.1	0.999	1
1q-Amp	Del_11q23.2	0.999	1
3p-Amp	Del_2q22.1	0.999	1
3p-Amp	Del_4q28.2	0.999	1
3p-Amp	Del_11p11.2	0.999	1
3p-Amp	Del_12q24.32	0.999	1
3p-Amp	Del_13q22.1	0.999	1
3q-Amp	16q-Del	0.999	1
3q-Amp	6q-Del	0.999	1
3q-Amp	Amp_8p11.23	0.999	1
3q-Amp	Amp_8q22.1	0.999	1
3q-Amp	Del_4q28.2	0.999	1
3q-Amp	Del_12q24.32	0.999	1
7p-Amp	Xp-Del	0.999	1
7p-Amp	Xq-Del	0.999	1
7p-Amp	Amp_1q22	0.999	1
7p-Amp	Amp_9q33.3	0.999	1
7p-Amp	Amp_13q12.11	0.999	1
7p-Amp	Amp_16q11.2	0.999	1
7p-Amp	Del_2q22.3	0.999	1
7p-Amp	Del_12q24.32	0.999	1
7q-Amp	13q-Del	0.999	1
7q-Amp	Amp_1q22	0.999	1
7q-Amp	Amp_3q26.2	0.999	1
7q-Amp	Amp_4q13.3	0.999	1
7q-Amp	Amp_16q11.2	0.999	1
7q-Amp	Amp_Xp21.1	0.999	1
8p-Amp	Del_4q28.2	0.999	1
8q-Amp	Amp_7p14.3	0.999	1
8q-Amp	Del_8p21.3	0.999	1
9q-Amp	Del_16q22.3	0.999	1
10p-Del	Del_4q28.2	0.999	1
10p-Del	Del_12q24.32	0.999	1
10q-Del	13q-Del	0.999	1
10q-Del	Amp_13q12.11	0.999	1
10q-Del	Del_1p22.1	0.999	1
13q-Del	Amp_7q22.1	0.999	1
13q-Del	Amp_8q22.1	0.999	1
13q-Del	Amp_11q13.2	0.999	1
13q-Del	Amp_16q11.2	0.999	1
13q-Del	Del_17p13.1	0.999	1
16q-Del	8p-Del	0.999	1
16q-Del	Amp_7p14.3	0.999	1
16q-Del	Amp_8q24.21	0.999	1
16q-Del	Amp_9q33.3	0.999	1
16q-Del	Del_1p31.3	0.999	1
16q-Del	Del_4q28.2	0.999	1
16q-Del	Del_13q22.1	0.999	1
17p-Del	8p-Del	0.999	1
17p-Del	Amp_15q11.2	0.999	1
17p-Del	Amp_16q11.2	0.999	1
17p-Del	Del_13q14.13	0.999	1
17p-Del	Del_21q22.3	0.999	1
18p-Del	Del_9p23	0.999	1
18p-Del	Del_12p13.1	0.999	1
18q-Del	8p-Del	0.999	1
18q-Del	Del_10q23.31	0.999	1
18q-Del	Del_12p13.1	0.999	1
22q-Del	8p-Del	0.999	1
22q-Del	Amp_17q23.2	0.999	1
22q-Del	Amp_Xq25	0.999	1
6q-Del	Amp_8q22.1	0.999	1
6q-Del	Del_18q21.31	0.999	1
8p-Del	Amp_20q13.2	0.999	1
8p-Del	Del_6p25.1	0.999	1
8p-Del	Del_17q21.31	0.999	1
8p-Del	Del_18q21.31	0.999	1
8q-Del	Del_9p23	0.999	1
Xp-Del	Amp_7p14.3	0.999	1
Xp-Del	Amp_7q22.1	0.999	1
Xp-Del	Amp_13q12.11	0.999	1
Xp-Del	Del_12p13.1	0.999	1
Xq-Del	Amp_7p14.3	0.999	1
Xq-Del	Amp_7q22.1	0.999	1
Xq-Del	Amp_13q12.11	0.999	1
Xq-Del	Del_12p13.1	0.999	1
Amp_1q22	Amp_3q21.3	0.999	1
Amp_1q22	Amp_7q22.1	0.999	1
Amp_1q22	Amp_8p11.23	0.999	1
Amp_1q22	Amp_14q21.1	0.999	1
Amp_1q22	Amp_16q11.2	0.999	1
Amp_3q21.3	Amp_4q13.3	0.999	1
Amp_3q21.3	Amp_8p11.23	0.999	1
Amp_3q21.3	Amp_16q11.2	0.999	1
Amp_3q21.3	Amp_Xp21.1	0.999	1
Amp_3q21.3	Del_13q22.1	0.999	1
Amp_3q26.2	Amp_4q13.3	0.999	1
Amp_3q26.2	Amp_11q13.2	0.999	1
Amp_3q26.2	Amp_16q11.2	0.999	1
Amp_3q26.2	Amp_17q23.2	0.999	1
Amp_3q26.2	Del_8p21.3	0.999	1
Amp_4q13.3	Amp_8p11.23	0.999	1
Amp_4q13.3	Amp_8q22.1	0.999	1
Amp_4q13.3	Amp_8q24.21	0.999	1
Amp_7p14.3	Amp_9q33.3	0.999	1
Amp_7p14.3	Amp_13q12.11	0.999	1
Amp_7p14.3	Amp_16q11.2	0.999	1
Amp_7p14.3	Del_2q22.3	0.999	1
Amp_7p14.3	Del_5q13.2	0.999	1
Amp_7p14.3	Del_9p23	0.999	1
Amp_7p14.3	Del_12q24.32	0.999	1
Amp_7q22.1	Amp_8p11.23	0.999	1
Amp_7q22.1	Amp_11q13.2	0.999	1
Amp_7q22.1	Amp_13q12.11	0.999	1
Amp_7q22.1	Amp_16q11.2	0.999	1
Amp_7q22.1	Amp_17q23.2	0.999	1
Amp_7q22.1	Del_5q11.2	0.999	1
Amp_8p11.23	Del_5q13.2	0.999	1
Amp_8p11.23	Del_8p21.3	0.999	1
Amp_8q22.1	Amp_11q13.2	0.999	1
Amp_8q22.1	Amp_Xp22.11	0.999	1
Amp_8q22.1	Del_17p13.1	0.999	1
Amp_8q24.21	Amp_14q21.1	0.999	1
Amp_8q24.21	Amp_Xp22.11	0.999	1
Amp_8q24.21	Del_2q22.1	0.999	1
Amp_9q33.3	Amp_20q13.2	0.999	1
Amp_9q33.3	Amp_Xp21.1	0.999	1
Amp_9q33.3	Del_5q11.2	0.999	1
Amp_9q33.3	Del_13q22.1	0.999	1
Amp_9q33.3	Del_16q24.1	0.999	1
Amp_9q33.3	Del_17p13.1	0.999	1
Amp_9q33.3	Del_18q23	0.999	1
Amp_11q13.2	Amp_14q21.1	0.999	1
Amp_12q23.1	Del_2q22.1	0.999	1
Amp_12q23.1	Del_12q24.32	0.999	1
Amp_13q12.11	Amp_17q23.2	0.999	1
Amp_13q12.11	Amp_Xp21.1	0.999	1
Amp_16q11.2	Del_13q22.1	0.999	1
Amp_16q11.2	Del_16q24.1	0.999	1
Amp_17q23.2	Del_8p23.2	0.999	1
Amp_17q23.2	Del_15q21.3	0.999	1
Del_1p31.3	Del_8p23.2	0.999	1
Del_1p31.3	Del_13q22.1	0.999	1
Del_1p31.3	Del_21q22.3	0.999	1
Del_1p22.1	Del_1q42.3	0.999	1
Del_1p22.1	Del_2q22.1	0.999	1
Del_1p22.1	Del_18q23	0.999	1
Del_2q22.1	Del_5q11.2	0.999	1
Del_2q22.3	Del_18q23	0.999	1
Del_3p13	Del_10q23.31	0.999	1
Del_4q28.2	Del_13q14.13	0.999	1
Del_5q11.2	Del_17p13.1	0.999	1
Del_5q13.2	Del_8p23.2	0.999	1
Del_5q13.2	Del_11p11.2	0.999	1
Del_5q21.1	Del_12p13.1	0.999	1
Del_6q14.3	Del_12q24.32	0.999	1
Del_8p23.2	Del_21q22.3	0.999	1
Del_8p21.3	Del_11p11.2	0.999	1
Del_9p23	Del_17p13.1	0.999	1
Del_9p23	Del_18q23	0.999	1
Del_10q23.31	Del_13q22.1	0.999	1
Del_10q23.31	Del_15q21.3	0.999	1
Del_10q23.31	Del_17q21.31	0.999	1
Del_11p11.2	Del_13q14.13	0.999	1
Del_11p11.2	Del_16q24.1	0.999	1
Del_11q22.3	Del_13q22.1	0.999	1
Del_12p13.1	Del_17p13.1	0.999	1
Del_13q14.13	Del_17p13.1	0.999	1
Del_13q14.13	Del_21q22.3	0.999	1
Del_16q22.3	Del_18q21.31	0.999	1
Del_18q21.31	Del_19q13.2	0.999	1
ATM	13q-Del	1	1
FOXA1	3p-Amp	1	1
FOXA1	3q-Amp	1	1
FOXA1	Amp_3q21.3	1	1
FOXA1	Amp_3q26.2	1	1
FOXA1	Amp_7q22.1	1	1
FOXA1	Del_2q22.1	1	1
FOXA1	Del_4q28.2	1	1
FOXA1	Del_5q21.1	1	1
FOXA1	Del_11p11.2	1	1
FOXA1	Del_13q22.1	1	1
PIK3CA	Del_1p31.3	1	1
PTEN	Del_10q23.31	1	1
SMAD4	18q-Del	1	1
SMAD4	Xp-Del	1	1
SMAD4	Xq-Del	1	1
SMAD4	Del_13q14.13	1	1
SMAD4	Del_13q22.1	1	1
SMAD4	Del_18q21.31	1	1
SPOP	3q-Amp	1	1
SPOP	7p-Amp	1	1
SPOP	Amp_7q22.1	1	1
SPOP	Del_2q22.1	1	1
SPOP	Del_2q22.3	1	1
SPOP	Del_4q28.2	1	1
SPOP	Del_5q11.2	1	1
SPOP	Del_5q13.2	1	1
SPOP	Del_5q21.1	1	1
SPOP	Del_6q14.3	1	1
SPOP	Del_13q14.13	1	1
TP53	Del_8p23.2	1	1
TP53	Del_8p21.3	1	1
TP53	Del_17p13.1	1	1
XPO5	Del_16q24.1	1	1
1q-Amp	Amp_1q22	1	1
1q-Amp	Amp_11q13.2	1	1
1q-Amp	Del_5q11.2	1	1
1q-Amp	Del_11q22.3	1	1
3p-Amp	3q-Amp	1	1
3p-Amp	7p-Amp	1	1
3p-Amp	7q-Amp	1	1
3p-Amp	6q-Del	1	1
3p-Amp	Amp_3q21.3	1	1
3p-Amp	Amp_3q26.2	1	1
3p-Amp	Amp_4q13.3	1	1
3p-Amp	Amp_7p14.3	1	1
3p-Amp	Amp_7q22.1	1	1
3p-Amp	Amp_8q22.1	1	1
3p-Amp	Amp_8q24.21	1	1
3p-Amp	Amp_16q11.2	1	1
3p-Amp	Amp_20q13.2	1	1
3p-Amp	Del_5q21.1	1	1
3q-Amp	7p-Amp	1	1
3q-Amp	7q-Amp	1	1
3q-Amp	Amp_3q21.3	1	1
3q-Amp	Amp_3q26.2	1	1
3q-Amp	Amp_4q13.3	1	1
3q-Amp	Amp_7p14.3	1	1
3q-Amp	Amp_7q22.1	1	1
3q-Amp	Amp_16q11.2	1	1
3q-Amp	Amp_20q13.2	1	1
3q-Amp	Del_2q22.1	1	1
3q-Amp	Del_5q21.1	1	1
3q-Amp	Del_6q14.3	1	1
3q-Amp	Del_11p11.2	1	1
3q-Amp	Del_13q22.1	1	1
7p-Amp	7q-Amp	1	1
7p-Amp	8p-Amp	1	1
7p-Amp	8q-Amp	1	1
7p-Amp	13q-Del	1	1
7p-Amp	Amp_3q21.3	1	1
7p-Amp	Amp_3q26.2	1	1
7p-Amp	Amp_4q13.3	1	1
7p-Amp	Amp_7p14.3	1	1
7p-Amp	Amp_7q22.1	1	1
7p-Amp	Amp_8p11.23	1	1
7p-Amp	Amp_8q22.1	1	1
7p-Amp	Amp_8q24.21	1	1
7p-Amp	Amp_20q13.2	1	1
7p-Amp	Del_2q22.1	1	1
7p-Amp	Del_4q28.2	1	1
7p-Amp	Del_5q11.2	1	1
7p-Amp	Del_5q13.2	1	1
7p-Amp	Del_5q21.1	1	1
7p-Amp	Del_6q14.3	1	1
7p-Amp	Del_8p21.3	1	1
7p-Amp	Del_11p11.2	1	1
7p-Amp	Del_13q14.13	1	1
7p-Amp	Del_13q22.1	1	1
7q-Amp	8p-Amp	1	1
7q-Amp	8q-Amp	1	1
7q-Amp	Xp-Del	1	1
7q-Amp	Xq-Del	1	1
7q-Amp	Amp_3q21.3	1	1
7q-Amp	Amp_7p14.3	1	1
7q-Amp	Amp_7q22.1	1	1
7q-Amp	Amp_8q22.1	1	1
7q-Amp	Amp_8q24.21	1	1
7q-Amp	Amp_9q33.3	1	1
7q-Amp	Amp_13q12.11	1	1
7q-Amp	Del_2q22.1	1	1
7q-Amp	Del_4q28.2	1	1
7q-Amp	Del_5q11.2	1	1
7q-Amp	Del_5q13.2	1	1
7q-Amp	Del_5q21.1	1	1
7q-Amp	Del_12q24.32	1	1
7q-Amp	Del_13q14.13	1	1
7q-Amp	Del_13q22.1	1	1
8p-Amp	8q-Amp	1	1
8p-Amp	Xp-Del	1	1
8p-Amp	Xq-Del	1	1
8p-Amp	Amp_7p14.3	1	1
8p-Amp	Amp_7q22.1	1	1
8p-Amp	Amp_8p11.23	1	1
8p-Amp	Amp_8q22.1	1	1
8p-Amp	Amp_8q24.21	1	1
8p-Amp	Del_5q11.2	1	1
8p-Amp	Del_5q13.2	1	1
8q-Amp	9q-Amp	1	1
8q-Amp	16q-Del	1	1
8q-Amp	Amp_1q22	1	1
8q-Amp	Amp_7q22.1	1	1
8q-Amp	Amp_8p11.23	1	1
8q-Amp	Amp_8q22.1	1	1
8q-Amp	Amp_8q24.21	1	1
8q-Amp	Amp_9q33.3	1	1
8q-Amp	Amp_11q13.2	1	1
8q-Amp	Amp_16q11.2	1	1
8q-Amp	Del_5q11.2	1	1
8q-Amp	Del_8p23.2	1	1
8q-Amp	Del_11q22.3	1	1
9q-Amp	Xp-Del	1	1
9q-Amp	Xq-Del	1	1
9q-Amp	Amp_8q22.1	1	1
9q-Amp	Amp_8q24.21	1	1
9q-Amp	Amp_9q33.3	1	1
9q-Amp	Del_5q11.2	1	1
9q-Amp	Del_8p21.3	1	1
9q-Amp	Del_17p13.1	1	1
10p-Del	10q-Del	1	1
10p-Del	Del_6q14.3	1	1
10p-Del	Del_8p21.3	1	1
10p-Del	Del_12p13.1	1	1
10q-Del	8q-Del	1	1
10q-Del	Del_6p25.1	1	1
10q-Del	Del_8p21.3	1	1
10q-Del	Del_10q23.31	1	1
10q-Del	Del_17p13.1	1	1
12p-Del	8p-Del	1	1
12p-Del	Del_8p23.2	1	1
12p-Del	Del_8p21.3	1	1
12p-Del	Del_12p13.1	1	1
12p-Del	Del_16q24.1	1	1
12p-Del	Del_21q22.3	1	1
13q-Del	Amp_4q13.3	1	1
13q-Del	Del_2q22.3	1	1
13q-Del	Del_8p23.2	1	1
13q-Del	Del_13q14.13	1	1
13q-Del	Del_13q22.1	1	1
16q-Del	17p-Del	1	1
16q-Del	18p-Del	1	1
16q-Del	18q-Del	1	1
16q-Del	Amp_7q22.1	1	1
16q-Del	Amp_8q22.1	1	1
16q-Del	Amp_16q11.2	1	1
16q-Del	Del_8p23.2	1	1
16q-Del	Del_8p21.3	1	1
16q-Del	Del_11p11.2	1	1
16q-Del	Del_11q22.3	1	1
16q-Del	Del_12q24.32	1	1
16q-Del	Del_13q14.13	1	1
16q-Del	Del_16q22.3	1	1
16q-Del	Del_16q24.1	1	1
16q-Del	Del_17p13.1	1	1
17p-Del	18p-Del	1	1
17p-Del	18q-Del	1	1
17p-Del	6q-Del	1	1
17p-Del	Amp_17q23.2	1	1
17p-Del	Del_6q14.3	1	1
17p-Del	Del_8p23.2	1	1
17p-Del	Del_8p21.3	1	1
17p-Del	Del_10q23.31	1	1
17p-Del	Del_12p13.1	1	1
17p-Del	Del_16q24.1	1	1
17p-Del	Del_17p13.1	1	1
17p-Del	Del_18q21.31	1	1
17p-Del	Del_18q23	1	1
18p-Del	18q-Del	1	1
18p-Del	Del_1q42.3	1	1
18p-Del	Del_16q22.3	1	1
18p-Del	Del_16q24.1	1	1
18p-Del	Del_17p13.1	1	1
18p-Del	Del_18q21.31	1	1
18p-Del	Del_18q23	1	1
18q-Del	8q-Del	1	1
18q-Del	Del_1p31.3	1	1
18q-Del	Del_5q11.2	1	1
18q-Del	Del_5q13.2	1	1
18q-Del	Del_8p23.2	1	1
18q-Del	Del_8p21.3	1	1
18q-Del	Del_9p23	1	1
18q-Del	Del_16q22.3	1	1
18q-Del	Del_16q24.1	1	1
18q-Del	Del_17p13.1	1	1
18q-Del	Del_18q21.31	1	1
18q-Del	Del_18q23	1	1
22q-Del	Amp_9q33.3	1	1
22q-Del	Del_1p22.1	1	1
22q-Del	Del_9p23	1	1
22q-Del	Del_18q21.31	1	1
22q-Del	Del_18q23	1	1
22q-Del	Del_19q13.2	1	1
6q-Del	Amp_3q21.3	1	1
6q-Del	Amp_4q13.3	1	1
6q-Del	Amp_20q13.2	1	1
6q-Del	Del_6q14.3	1	1
6q-Del	Del_13q14.13	1	1
6q-Del	Del_13q22.1	1	1
6q-Del	Del_18q23	1	1
8p-Del	8q-Del	1	1
8p-Del	Amp_17q23.2	1	1
8p-Del	Del_1p31.3	1	1
8p-Del	Del_3p13	1	1
8p-Del	Del_8p23.2	1	1
8p-Del	Del_8p21.3	1	1
8p-Del	Del_10q23.31	1	1
8p-Del	Del_12p13.1	1	1
8p-Del	Del_13q14.13	1	1
8p-Del	Del_16q22.3	1	1
8p-Del	Del_16q24.1	1	1
8p-Del	Del_17p13.1	1	1
8p-Del	Del_18q23	1	1
8q-Del	Del_8p23.2	1	1
8q-Del	Del_8p21.3	1	1
8q-Del	Del_17p13.1	1	1
8q-Del	Del_18q21.31	1	1
8q-Del	Del_18q23	1	1
Xp-Del	Xq-Del	1	1
Xp-Del	Amp_9q33.3	1	1
Xp-Del	Del_4q28.2	1	1
Xp-Del	Del_5q11.2	1	1
Xp-Del	Del_5q13.2	1	1
Xp-Del	Del_5q21.1	1	1
Xp-Del	Del_11p11.2	1	1
Xp-Del	Del_11q22.3	1	1
Xp-Del	Del_13q14.13	1	1
Xp-Del	Del_13q22.1	1	1
Xq-Del	Amp_9q33.3	1	1
Xq-Del	Del_4q28.2	1	1
Xq-Del	Del_5q11.2	1	1
Xq-Del	Del_5q13.2	1	1
Xq-Del	Del_5q21.1	1	1
Xq-Del	Del_11p11.2	1	1
Xq-Del	Del_11q22.3	1	1
Xq-Del	Del_13q14.13	1	1
Xq-Del	Del_13q22.1	1	1
Amp_1q22	Amp_4q13.3	1	1
Amp_1q22	Amp_8q24.21	1	1
Amp_1q22	Amp_9q33.3	1	1
Amp_1q22	Amp_11q13.2	1	1
Amp_1q22	Amp_13q12.11	1	1
Amp_1q22	Amp_17q23.2	1	1
Amp_1q22	Amp_Xp22.11	1	1
Amp_1q22	Amp_Xp21.1	1	1
Amp_3q21.3	Amp_3q26.2	1	1
Amp_3q21.3	Amp_7p14.3	1	1
Amp_3q21.3	Amp_7q22.1	1	1
Amp_3q21.3	Amp_8q22.1	1	1
Amp_3q21.3	Amp_8q24.21	1	1
Amp_3q21.3	Amp_11q13.2	1	1
Amp_3q21.3	Del_2q22.1	1	1
Amp_3q21.3	Del_4q28.2	1	1
Amp_3q21.3	Del_5q11.2	1	1
Amp_3q21.3	Del_5q21.1	1	1
Amp_3q21.3	Del_6q14.3	1	1
Amp_3q26.2	Amp_7p14.3	1	1
Amp_3q26.2	Amp_7q22.1	1	1
Amp_3q26.2	Amp_8q22.1	1	1
Amp_3q26.2	Amp_8q24.21	1	1
Amp_3q26.2	Amp_20q13.2	1	1
Amp_4q13.3	Amp_7q22.1	1	1
Amp_4q13.3	Amp_20q13.2	1	1
Amp_4q13.3	Del_13q22.1	1	1
Amp_7p14.3	Amp_7q22.1	1	1
Amp_7p14.3	Amp_8p11.23	1	1
Amp_7p14.3	Amp_8q22.1	1	1
Amp_7p14.3	Amp_8q24.21	1	1
Amp_7p14.3	Amp_20q13.2	1	1
Amp_7p14.3	Del_2q22.1	1	1
Amp_7p14.3	Del_4q28.2	1	1
Amp_7p14.3	Del_5q21.1	1	1
Amp_7p14.3	Del_6q14.3	1	1
Amp_7p14.3	Del_11p11.2	1	1
Amp_7p14.3	Del_13q14.13	1	1
Amp_7p14.3	Del_13q22.1	1	1
Amp_7q22.1	Amp_8q22.1	1	1
Amp_7q22.1	Amp_8q24.21	1	1
Amp_7q22.1	Amp_9q33.3	1	1
Amp_7q22.1	Amp_20q13.2	1	1
Amp_7q22.1	Del_2q22.1	1	1
Amp_7q22.1	Del_4q28.2	1	1
Amp_7q22.1	Del_5q21.1	1	1
Amp_7q22.1	Del_6q14.3	1	1
Amp_7q22.1	Del_11p11.2	1	1
Amp_7q22.1	Del_12q24.32	1	1
Amp_7q22.1	Del_13q14.13	1	1
Amp_7q22.1	Del_13q22.1	1	1
Amp_8p11.23	Amp_8q22.1	1	1
Amp_8p11.23	Amp_8q24.21	1	1
Amp_8p11.23	Amp_11q13.2	1	1
Amp_8p11.23	Amp_20q13.2	1	1
Amp_8p11.23	Del_2q22.1	1	1
Amp_8p11.23	Del_8p23.2	1	1
Amp_8p11.23	Del_9p23	1	1
Amp_8q22.1	Amp_8q24.21	1	1
Amp_8q22.1	Amp_9q33.3	1	1
Amp_8q22.1	Amp_13q12.11	1	1
Amp_8q22.1	Amp_16q11.2	1	1
Amp_8q22.1	Amp_17q23.2	1	1
Amp_8q22.1	Amp_20q13.2	1	1
Amp_8q22.1	Del_5q11.2	1	1
Amp_8q22.1	Del_5q13.2	1	1
Amp_8q22.1	Del_8p23.2	1	1
Amp_8q22.1	Del_8p21.3	1	1
Amp_8q22.1	Del_13q14.13	1	1
Amp_8q22.1	Del_16q22.3	1	1
Amp_8q22.1	Del_16q24.1	1	1
Amp_8q24.21	Amp_9q33.3	1	1
Amp_8q24.21	Amp_11q13.2	1	1
Amp_8q24.21	Amp_16q11.2	1	1
Amp_8q24.21	Amp_17q23.2	1	1
Amp_8q24.21	Amp_20q13.2	1	1
Amp_8q24.21	Del_5q11.2	1	1
Amp_8q24.21	Del_5q13.2	1	1
Amp_8q24.21	Del_8p23.2	1	1
Amp_8q24.21	Del_8p21.3	1	1
Amp_8q24.21	Del_11q22.3	1	1
Amp_8q24.21	Del_13q14.13	1	1
Amp_8q24.21	Del_16q22.3	1	1
Amp_8q24.21	Del_16q24.1	1	1
Amp_9q33.3	Amp_11q13.2	1	1
Amp_9q33.3	Amp_13q12.11	1	1
Amp_9q33.3	Amp_16q11.2	1	1
Amp_9q33.3	Amp_17q23.2	1	1
Amp_9q33.3	Amp_Xp22.11	1	1
Amp_9q33.3	Del_8p23.2	1	1
Amp_9q33.3	Del_8p21.3	1	1
Amp_9q33.3	Del_16q22.3	1	1
Amp_9q33.3	Del_19q13.2	1	1
Amp_11q13.2	Amp_13q12.11	1	1
Amp_11q13.2	Amp_16q11.2	1	1
Amp_11q13.2	Amp_17q23.2	1	1
Amp_11q13.2	Amp_20q13.2	1	1
Amp_12q23.1	Amp_14q21.1	1	1
Amp_12q23.1	Del_6q14.3	1	1
Amp_15q11.2	Amp_17q23.2	1	1
Amp_15q11.2	Del_15q21.3	1	1
Amp_16q11.2	Amp_17q23.2	1	1
Amp_16q11.2	Amp_20q13.2	1	1
Amp_16q11.2	Amp_Xp22.11	1	1
Amp_16q11.2	Amp_Xp21.1	1	1
Amp_16q11.2	Del_8p23.2	1	1
Amp_16q11.2	Del_8p21.3	1	1
Amp_16q11.2	Del_16q22.3	1	1
Amp_17q23.2	Amp_20q13.2	1	1
Amp_20q13.2	Del_8p21.3	1	1
Amp_Xp22.11	Amp_Xp21.1	1	1
Del_1p31.3	Del_1p22.1	1	1
Del_1p31.3	Del_6p25.1	1	1
Del_1p31.3	Del_10q23.31	1	1
Del_1p31.3	Del_17p13.1	1	1
Del_1p31.3	Del_18q23	1	1
Del_1p22.1	Del_2q22.3	1	1
Del_1p22.1	Del_6p25.1	1	1
Del_1p22.1	Del_6q14.3	1	1
Del_1p22.1	Del_12q24.32	1	1
Del_1p22.1	Del_19q13.2	1	1
Del_1q42.3	Del_6q14.3	1	1
Del_2q22.1	Del_2q22.3	1	1
Del_2q22.1	Del_4q28.2	1	1
Del_2q22.1	Del_5q13.2	1	1
Del_2q22.1	Del_5q21.1	1	1
Del_2q22.1	Del_6q14.3	1	1
Del_2q22.1	Del_11p11.2	1	1
Del_2q22.1	Del_12q24.32	1	1
Del_2q22.1	Del_13q14.13	1	1
Del_2q22.1	Del_13q22.1	1	1
Del_2q22.3	Del_4q28.2	1	1
Del_2q22.3	Del_5q13.2	1	1
Del_2q22.3	Del_5q21.1	1	1
Del_2q22.3	Del_6q14.3	1	1
Del_2q22.3	Del_11p11.2	1	1
Del_2q22.3	Del_13q14.13	1	1
Del_2q22.3	Del_13q22.1	1	1
Del_3p13	Del_21q22.3	1	1
Del_4q28.2	Del_5q13.2	1	1
Del_4q28.2	Del_5q21.1	1	1
Del_4q28.2	Del_6q14.3	1	1
Del_4q28.2	Del_11p11.2	1	1
Del_4q28.2	Del_13q22.1	1	1
Del_5q11.2	Del_5q13.2	1	1
Del_5q11.2	Del_5q21.1	1	1
Del_5q11.2	Del_6q14.3	1	1
Del_5q11.2	Del_8p23.2	1	1
Del_5q11.2	Del_8p21.3	1	1
Del_5q11.2	Del_12p13.1	1	1
Del_5q11.2	Del_13q14.13	1	1
Del_5q11.2	Del_13q22.1	1	1
Del_5q11.2	Del_16q24.1	1	1
Del_5q11.2	Del_18q21.31	1	1
Del_5q11.2	Del_18q23	1	1
Del_5q13.2	Del_5q21.1	1	1
Del_5q13.2	Del_6q14.3	1	1
Del_5q13.2	Del_8p21.3	1	1
Del_5q13.2	Del_12p13.1	1	1
Del_5q13.2	Del_16q22.3	1	1
Del_5q13.2	Del_16q24.1	1	1
Del_5q13.2	Del_18q21.31	1	1
Del_5q21.1	Del_6q14.3	1	1
Del_5q21.1	Del_11p11.2	1	1
Del_5q21.1	Del_13q14.13	1	1
Del_5q21.1	Del_13q22.1	1	1
Del_6p25.1	Del_6q14.3	1	1
Del_6p25.1	Del_13q14.13	1	1
Del_6p25.1	Del_13q22.1	1	1
Del_6q14.3	Del_8p21.3	1	1
Del_6q14.3	Del_11p11.2	1	1
Del_6q14.3	Del_12p13.1	1	1
Del_6q14.3	Del_13q14.13	1	1
Del_6q14.3	Del_13q22.1	1	1
Del_8p23.2	Del_8p21.3	1	1
Del_8p23.2	Del_10q23.31	1	1
Del_8p23.2	Del_12p13.1	1	1
Del_8p23.2	Del_13q14.13	1	1
Del_8p23.2	Del_16q22.3	1	1
Del_8p23.2	Del_16q24.1	1	1
Del_8p23.2	Del_17p13.1	1	1
Del_8p23.2	Del_18q21.31	1	1
Del_8p23.2	Del_18q23	1	1
Del_8p21.3	Del_9p23	1	1
Del_8p21.3	Del_10q23.31	1	1
Del_8p21.3	Del_12p13.1	1	1
Del_8p21.3	Del_12q24.32	1	1
Del_8p21.3	Del_13q14.13	1	1
Del_8p21.3	Del_13q22.1	1	1
Del_8p21.3	Del_15q21.3	1	1
Del_8p21.3	Del_16q22.3	1	1
Del_8p21.3	Del_16q24.1	1	1
Del_8p21.3	Del_17p13.1	1	1
Del_8p21.3	Del_17q21.31	1	1
Del_8p21.3	Del_18q21.31	1	1
Del_8p21.3	Del_18q23	1	1
Del_8p21.3	Del_21q22.3	1	1
Del_9p23	Del_18q21.31	1	1
Del_10q23.31	Del_12p13.1	1	1
Del_10q23.31	Del_13q14.13	1	1
Del_10q23.31	Del_17p13.1	1	1
Del_10q23.31	Del_18q21.31	1	1
Del_10q23.31	Del_18q23	1	1
Del_10q23.31	Del_21q22.3	1	1
Del_11p11.2	Del_16q22.3	1	1
Del_11q22.3	Del_11q23.2	1	1
Del_11q22.3	Del_16q22.3	1	1
Del_11q22.3	Del_16q24.1	1	1
Del_12p13.1	Del_13q14.13	1	1
Del_12p13.1	Del_16q24.1	1	1
Del_12p13.1	Del_17q21.31	1	1
Del_12p13.1	Del_21q22.3	1	1
Del_12q24.32	Del_16q22.3	1	1
Del_12q24.32	Del_16q24.1	1	1
Del_13q14.13	Del_13q22.1	1	1
Del_13q14.13	Del_16q22.3	1	1
Del_13q14.13	Del_16q24.1	1	1
Del_13q22.1	Del_21q22.3	1	1
Del_16q22.3	Del_16q24.1	1	1
Del_16q22.3	Del_17p13.1	1	1
Del_16q22.3	Del_18q23	1	1
Del_16q22.3	Del_21q22.3	1	1
Del_16q24.1	Del_17p13.1	1	1
Del_16q24.1	Del_18q21.31	1	1
Del_16q24.1	Del_18q23	1	1
Del_16q24.1	Del_21q22.3	1	1
Del_17p13.1	Del_18q21.31	1	1
Del_17p13.1	Del_18q23	1	1
Del_17p13.1	Del_19q13.2	1	1
Del_17p13.1	Del_21q22.2	1	1
Del_17p13.1	Del_21q22.3	1	1
Del_17q21.31	Del_21q22.3	1	1
Del_18q21.31	Del_18q23	1	1
Del_18q23	Del_19q13.2	1	1
Del_21q22.2	Del_21q22.3	1	1
