"Sample"	"A_T_coord_clusters"	"G_C_coord_clusters"	"Non_coord_clusters"	"clusters"	"mutations"	"complex"	"insertions"	"deletions"	"indels"	"substitutions"	"bases"	"A_to_T"	"A_to_G"	"A_to_C"	"A"	"a"	"T_to_A"	"T_to_C"	"T_to_G"	"T"	"t"	"G_to_C"	"G_to_T"	"G_to_A"	"G"	"g"	"C_to_G"	"C_to_A"	"C_to_T"	"C"	"c"	"tCw_to_G"	"tCw_to_A"	"tCw_to_T"	"tCw"	"tcw"	"tCw_per_mut"	"tCw_per_C"	"tcw_per_c"	"enrich_tCw"	"freq_tCw"	"wGa_to_C"	"wGa_to_T"	"wGa_to_A"	"wGa"	"wga"	"wGa_per_mut"	"wGa_per_G"	"wga_per_g"	"enrich_wGa"	"freq_wGa"	"[tCw_to_G+tCw_to_T]_per_mut"	"tCw_to_G+tCw_to_T"	"[(C_to_G)+(C_to_T)]-[(tCw_to_G)+(tCw_to_T)]"	"tcw+wga"	"c-tcw"	"Fisher_p-value_tCw"	"BH_Fisher_p-value_tCw"	"bonferroni_Fisher_p-value_tCw"	"odds_ratio_tCw"	"95%_confidence_lower_tCw"	"95%_confidence_upper_tCw"	"APOBEC_enrich"	"tCw_to_G_enrich"	"Fisher_p-value_tCw_to_G"	"BH_Fisher_p-value_tCw_to_G"	"bonferroni_Fisher_p-value_tCw_to_G"	"odds_ratio_tCw_to_G"	"tCw_to_T_enrich"	"Fisher_p-value_tCw_to_T"	"BH_Fisher_p-value_tCw_to_T"	"bonferroni_Fisher_p-value_tCw_to_T"	"odds_ratio_tCw_to_T"	"p-value_GvT_skew"	"BH_p-value_GvT_skew"	"bonferroni_p-value_GvT_skew"	"non-APOBEC_mutations"	"non-APOBEC_substitutions"	"APOBEC_MutLoad_MinEstimate"
"TCGA-N5-A4R8-01A-11D-A28R-08"	0	0	0	0	63	0	1	4	5	58	2378	0	3	2	5	576	0	2	2	4	519	5	7	12	24	659	4	4	17	25	624	1	1	1	3	73	0.0476190476190476	0.12	0.116987179487179	1.02575342465753	0.0410958904109589	0	0	2	2	88	0.0317460317460317	0.0833333333333333	0.133535660091047	0.62405303030303	0.0227272727272727	0.0634920634920635	4	34	161	1122	0.71941379123369	1	1	0.81999085808394	0.262805389105277	Inf	0.838836220987251	0.88543823326432	0.701736352230187	1	1	0.871178033458427	0.824373527521953	0.723650379975114	1	1	0.804232685511154	0.523809523809524	1	1	59	54	0
"TCGA-N5-A4RA-01A-11D-A28R-08"	0	0	1	1	56	0	1	4	5	51	2091	1	3	3	7	518	0	1	1	2	412	0	7	11	18	569	3	3	18	24	592	0	0	0	0	60	0	0	0.101351351351351	0	0	0	0	0	0	68	0	0	0.119507908611599	0	0	0	0	32	128	1033	1	1	1	0	0	Inf	0	0	1	1	1	0	0	1	1	1	0	1	1	1	56	51	0
"TCGA-N5-A4RD-01A-11D-A28R-08"	0	1	0	1	67	1	2	2	4	62	2542	2	3	1	6	610	3	2	1	6	631	3	6	16	25	675	2	2	21	25	626	1	0	7	8	89	0.119402985074627	0.32	0.142172523961661	2.25078651685393	0.0898876404494382	2	2	0	4	76	0.0597014925373134	0.16	0.112592592592593	1.42105263157895	0.0526315789473684	0.149253731343284	10	32	165	1136	0.0377158392370996	0.396754940234723	1	2.1499413389263	1.05783671217445	Inf	1.87734487734488	4.73090909090909	0.0171758096009672	0.160540603246721	0.97902114725513	10.292255617532	1.49172809172809	0.187967523287527	1	1	1.60578820022468	0.213756898640463	0.761508951406649	1	57	52	0
"TCGA-N5-A4RF-01A-11D-A28R-08"	0	0	0	0	88	0	4	4	8	80	3280	0	4	2	6	708	3	3	2	8	813	3	6	22	31	916	4	7	24	35	843	1	1	1	3	98	0.0340909090909091	0.0857142857142857	0.116251482799526	0.73731778425656	0.0306122448979592	1	2	0	3	110	0.0340909090909091	0.0967741935483871	0.120087336244541	0.805865102639296	0.0272727272727273	0.0340909090909091	3	50	208	1551	0.957055663204357	1	1	0.447550975087837	0.117253038445114	Inf	0.478682873730044	2.41620879120879	0.198121288265699	0.571375816222921	1	2.98000223717684	0.183841973244147	0.996776300043468	1	1	0.165791816127816	1	1	1	85	77	0
"TCGA-N5-A4RJ-01A-11D-A28R-08"	0	0	0	0	68	0	0	2	2	66	2706	3	3	3	9	610	0	2	0	2	590	4	5	19	28	729	3	5	19	27	777	0	0	1	1	90	0.0147058823529412	0.037037037037037	0.115830115830116	0.319753086419753	0.0111111111111111	1	0	0	1	90	0.0147058823529412	0.0357142857142857	0.123456790123457	0.289285714285714	0.0111111111111111	0.0294117647058824	2	43	180	1326	0.976056123208449	1	1	0.342795505066266	0.0586134187555087	Inf	0.371851851851852	1.1952380952381	0.590894366648536	0.990617026440193	1	1.22759718567109	0.220175438596491	0.991767645712256	1	1	0.199215387524063	1	1	1	66	64	0
"TCGA-N5-A4RM-01A-11D-A28R-08"	0	0	0	0	69	0	1	7	8	61	2501	0	1	2	3	554	1	1	2	4	554	4	3	18	25	677	5	7	17	29	716	2	1	0	3	76	0.0434782608695652	0.103448275862069	0.106145251396648	0.97459165154265	0.0394736842105263	1	0	1	2	80	0.0289855072463768	0.08	0.118168389955687	0.677	0.025	0.0579710144927536	4	40	156	1237	0.741061391317976	1	1	0.79306650516846	0.256009599130057	Inf	0.811771561771562	2.97649572649573	0.0719004045345493	0.292737361319236	1	3.9580590034545	0.255128205128205	0.983898561314012	1	1	0.233359562190284	0.523809523809524	1	1	65	57	0
"TCGA-N5-A4RN-01A-12D-A28R-08"	0	0	0	0	91	0	1	3	4	87	3567	3	8	1	12	834	3	5	4	12	884	4	6	22	32	965	2	10	19	31	884	2	2	2	6	116	0.0659340659340659	0.193548387096774	0.131221719457014	1.47497219132369	0.0517241379310345	1	0	2	3	129	0.032967032967033	0.09375	0.133678756476684	0.701308139534884	0.0232558139534884	0.0769230769230769	7	40	245	1604	0.436174096237884	1	1	1.1456003438416	0.503111602507275	Inf	1.12401215805471	3.7734693877551	0.0346455380440299	0.19953871830864	1	6.53570910031103	0.736286709805874	0.809721248441225	1	1	0.707892340236031	1	1	1	84	80	0
"TCGA-N5-A4RO-01A-11D-A28R-08"	0	0	0	0	66	0	0	3	3	63	2583	1	6	0	7	583	1	3	0	4	602	8	3	15	26	718	6	7	13	26	680	2	1	1	4	79	0.0606060606060606	0.153846153846154	0.116176470588235	1.32424537487829	0.0506329113924051	3	1	0	4	87	0.0606060606060606	0.153846153846154	0.12116991643454	1.26967285587975	0.0459770114942529	0.0909090909090909	6	36	166	1232	0.38662317240843	1	1	1.23674671459316	0.501153094311233	Inf	1.20309810671256	3.00774526678141	0.0197155126794219	0.160540603246721	1	4.11699679550282	0.300774526678141	0.970495326813689	1	1	0.275032069762622	0.118881118881119	0.605042016806723	1	60	57	0
"TCGA-N5-A4RS-01A-11D-A28R-08"	0	0	0	0	38	0	1	5	6	32	1312	0	0	1	1	328	0	1	2	3	261	0	2	11	13	374	2	5	8	15	349	1	1	1	3	47	0.0789473684210526	0.2	0.134670487106017	1.48510638297872	0.0638297872340425	0	1	0	1	37	0.0263157894736842	0.0769230769230769	0.0989304812834225	0.777546777546778	0.027027027027027	0.0526315789473684	2	19	84	639	0.720327005694117	1	1	0.800972623983691	0.130923402395112	Inf	0.819727891156463	4.30357142857143	0.220880167650981	0.571375816222921	1	7.56812077389844	0.453007518796992	0.903864190780264	1	1	0.422975582211977	1	1	1	36	30	0
"TCGA-N5-A4RT-01A-11D-A28R-08"	0	0	0	0	115	3	0	4	4	108	4428	4	5	3	12	1069	2	2	6	10	998	10	12	21	43	1190	11	12	20	43	1171	2	1	4	7	147	0.0608695652173913	0.162790697674419	0.125533731853117	1.29678848283499	0.0476190476190476	3	1	3	7	153	0.0608695652173913	0.162790697674419	0.128571428571429	1.26614987080103	0.0457516339869281	0.104347826086957	12	50	300	2061	0.0929161897087241	0.662027851674659	1	1.64839026775995	0.888823358292562	Inf	1.52322580645161	1.87380952380952	0.120651675353737	0.404537970303706	1	2.14598399620122	1.34365853658537	0.264037679373921	1	1	1.414176935408	0.703567101897967	1	1	103	96	0
"TCGA-N5-A4RU-01A-31D-A28R-08"	0	0	0	0	79	0	1	3	4	75	3075	2	4	3	9	732	1	4	1	6	694	7	8	13	28	798	9	6	17	32	851	0	2	2	4	105	0.0506329113924051	0.125	0.123384253819036	1.01309523809524	0.0380952380952381	3	1	1	5	95	0.0632911392405063	0.178571428571429	0.119047619047619	1.5	0.0526315789473684	0.0759493670886076	6	40	200	1449	0.494190784159742	1	1	1.08672248421704	0.443824071383138	Inf	1.0754347826087	1.5459375	0.308469376273088	0.676259786444847	1	1.67129532315488	0.8245	0.722784862441664	1	1	0.805096848729071	1	1	1	73	69	0
"TCGA-N5-A4RV-01A-21D-A28R-08"	0	0	0	0	68	0	1	5	6	62	2542	4	4	5	13	589	2	1	2	5	579	7	6	11	24	670	5	3	12	20	704	1	0	0	1	81	0.0147058823529412	0.05	0.115056818181818	0.434567901234568	0.0123456790123457	2	2	0	4	80	0.0588235294117647	0.166666666666667	0.119402985074627	1.39583333333333	0.05	0.0441176470588235	3	32	161	1213	0.793958997795099	1	1	0.706481501911523	0.181566979403697	Inf	0.731499556344277	2.13354037267081	0.16096224969363	0.509713790696495	1	2.5089105743493	0	1	1	1	0	0.166666666666667	0.633333333333335	1	65	59	0
"TCGA-N5-A59E-01A-11D-A28R-08"	0	0	0	0	71	1	1	8	9	61	2501	3	3	2	8	565	1	0	3	4	624	5	6	13	24	628	11	5	9	25	684	4	1	1	6	96	0.0845070422535211	0.24	0.140350877192982	1.71	0.0625	3	2	0	5	78	0.0704225352112676	0.208333333333333	0.124203821656051	1.67735042735043	0.0641025641025641	0.112676056338028	8	30	174	1138	0.128053666376484	0.811006553717732	1	1.74319418860513	0.790397589766797	Inf	1.58741681790684	3.29885057471264	0.00302104557153987	0.0544518834628746	0.172199597577773	5.07694439086203	0.342737722048067	0.955851171645682	1	1	0.311617799921964	0.0237358101135191	0.338235294117647	1	63	53	0
"TCGA-N5-A59F-01A-11D-A28R-08"	0	0	0	0	71	0	2	2	4	67	2747	0	5	0	5	624	3	2	1	6	611	4	6	20	30	744	3	7	16	26	768	1	0	1	2	94	0.028169014084507	0.0769230769230769	0.122395833333333	0.62847790507365	0.0212765957446809	0	0	1	1	79	0.0140845070422535	0.0333333333333333	0.106182795698925	0.313924050632911	0.0126582278481013	0.0422535211267606	3	40	173	1339	0.882366130081892	1	1	0.580658308551131	0.150739431939805	Inf	0.60975937626025	1.2485549132948	0.574036417194802	0.990617026440193	1	1.28974165441952	0.485549132947977	0.927888039389994	1	1	0.455459397394715	1	1	1	68	64	0
"TCGA-N6-A4V9-01A-11D-A28R-08"	0	0	0	0	47	0	0	4	4	43	1763	3	5	0	8	408	1	3	0	4	443	2	4	8	14	440	4	4	9	17	472	0	1	2	3	57	0.0638297872340425	0.176470588235294	0.120762711864407	1.46130030959752	0.0526315789473684	0	1	0	1	63	0.0212765957446809	0.0714285714285714	0.143181818181818	0.498866213151927	0.0158730158730159	0.0425531914893617	2	21	120	792	0.824920695150107	1	1	0.628837140753697	0.103902554348724	Inf	0.660869565217391	0	1	1	1	0	0.894117647058824	0.676558796358456	1	1	0.880143669231693	0.428571428571429	1	1	45	41	0
"TCGA-N6-A4VC-01A-11D-A28R-08"	0	0	0	0	60	0	0	2	2	58	2378	3	6	2	11	560	2	8	1	11	572	1	2	17	20	607	4	4	8	16	639	0	0	0	0	74	0	0	0.115805946791862	0	0	0	0	0	0	63	0	0	0.103789126853377	0	0	0	0	30	137	1109	1	1	1	0	0	Inf	0	0	1	1	1	0	0	1	1	1	0	1	1	1	60	58	0
"TCGA-N6-A4VD-01A-11D-A28R-08"	0	0	0	0	107	1	3	9	12	94	3854	0	5	2	7	867	2	2	0	4	851	1	2	34	37	1056	1	5	40	46	1080	0	0	0	0	135	0	0	0.125	0	0	1	1	2	4	138	0.0373831775700935	0.108108108108108	0.130681818181818	0.827262044653349	0.0289855072463768	0.0280373831775701	3	73	273	1863	0.99753016717943	1	1	0.280547893982523	0.0743572744256998	Inf	0.308849045691151	3.91208791208791	0.239942340682868	0.571375816222921	1	6.81267200411002	0.211464211464211	0.999464577585631	1	1	0.189639886241937	1	1	1	104	91	0
"TCGA-N6-A4VE-01A-11D-A28R-08"	0	0	1	1	78	0	0	5	5	73	2993	4	3	5	12	738	4	5	2	11	719	8	9	12	29	772	4	7	10	21	764	0	1	1	2	89	0.0256410256410256	0.0952380952380952	0.116492146596859	0.817549491706795	0.0224719101123595	1	1	1	3	88	0.0384615384615385	0.103448275862069	0.113989637305699	0.907523510971787	0.0340909090909091	0.0384615384615385	3	31	177	1359	0.767336473220553	1	1	0.743155186278744	0.190892733939443	Inf	0.765702891326022	0.72316384180791	0.770397411199089	1	1	0.698138560706174	0.788906009244992	0.739062200087598	1	1	0.767914701453052	1	1	1	75	70	0
"TCGA-N6-A4VF-01A-31D-A28R-08"	0	0	0	0	54	0	1	3	4	50	2050	1	1	2	4	433	1	1	1	3	479	2	1	17	20	570	3	3	17	23	568	0	1	1	2	68	0.037037037037037	0.0869565217391304	0.119718309859155	0.726342710997443	0.0294117647058824	0	0	2	2	59	0.037037037037037	0.1	0.103508771929825	0.966101694915254	0.0338983050847458	0.0555555555555556	3	36	127	1011	0.824855410530183	1	1	0.663585455838624	0.170955731691601	Inf	0.689279224712296	0	1	1	1	0	0.790643816581751	0.747530045659763	1	1	0.770539550982804	0.142857142857143	0.605042016806723	1	51	47	0
"TCGA-N6-A4VG-01A-31D-A28R-08"	0	0	0	0	61	1	0	4	4	56	2296	2	1	3	6	548	0	3	1	4	526	5	6	15	26	663	4	3	13	20	559	2	0	2	4	69	0.0655737704918033	0.2	0.123434704830054	1.62028985507246	0.0579710144927536	0	0	1	1	90	0.0163934426229508	0.0384615384615385	0.135746606334842	0.283333333333333	0.0111111111111111	0.0819672131147541	5	32	159	1063	0.539759553252689	1	1	1.04458638024708	0.382358039335049	Inf	1.03858575556689	1.7078965758211	0.333295844337894	0.689519893342554	1	1.90879147858702	0.823450134770889	0.725109240250541	1	1	0.802395159315053	1	1	1	56	51	0
"TCGA-N7-A4Y0-01A-12D-A28R-08"	0	0	0	0	899	2	31	136	167	730	29930	10	67	7	84	6543	6	85	7	98	6748	7	34	212	253	8378	9	52	234	295	8261	0	6	4	10	916	0.0111234705228031	0.0338983050847458	0.110882459750636	0.305713862778477	0.0109170305676856	0	2	7	9	938	0.0100111234705228	0.0355731225296443	0.111959894962998	0.317730938756247	0.00959488272921109	0.0122358175750834	11	451	1854	14785	0.999999999999584	1	1	0.194513855785454	0.10819756154481	Inf	0.213682128730672	0	1	1	1	0	0.221347855321907	0.999999999998137	1	1	0.201668280822892	0.000125622205711194	0.00238682190851269	0.00716046572553806	888	719	0
"TCGA-N7-A4Y5-01A-12D-A28R-08"	0	0	0	0	69	0	1	3	4	65	2665	0	4	2	6	604	0	3	4	7	611	9	2	18	29	719	6	2	15	23	731	2	0	2	4	81	0.0579710144927536	0.173913043478261	0.110807113543092	1.56951154052603	0.0493827160493827	1	1	2	4	86	0.0579710144927536	0.137931034482759	0.119610570236439	1.15316760224539	0.0465116279069767	0.101449275362319	7	41	167	1283	0.319870276601809	1	1	1.31140564331873	0.574085850394762	Inf	1.26621756487026	1.73652694610778	0.248215988264196	0.571375816222921	1	1.91966959784256	1.05244057339866	0.539372169178123	1	1	1.05964744206434	1	1	1	62	58	0
"TCGA-N7-A4Y8-01A-11D-A28R-08"	0	0	0	0	70	0	0	6	6	64	2624	1	5	1	7	582	0	5	2	7	616	3	3	17	23	722	2	4	21	27	704	0	0	2	2	72	0.0285714285714286	0.0740740740740741	0.102272727272727	0.724279835390946	0.0277777777777778	0	1	1	2	73	0.0285714285714286	0.0869565217391304	0.101108033240997	0.860035735556879	0.0273972602739726	0.0428571428571429	3	40	145	1281	0.825802626302309	1	1	0.662745532599991	0.171753462663564	Inf	0.686126704089816	0	1	1	1	0	0.776406533575318	0.756913912790303	1	1	0.757372370287929	0.142857142857143	0.605042016806723	1	67	61	0
"TCGA-N7-A59B-01A-11D-A28R-08"	0	0	0	0	54	0	0	7	7	47	1927	2	3	0	5	451	4	4	1	9	481	6	3	11	20	503	1	4	8	13	492	0	0	0	0	62	0	0	0.126016260162602	0	0	1	0	0	1	70	0.0185185185185185	0.05	0.139165009940358	0.359285714285714	0.0142857142857143	0.0185185185185185	1	25	132	863	0.974707930996336	1	1	0.261728183705809	0.0128443320766867	Inf	0.289918414918415	1.07683982683983	0.632155038685284	1	1	1.08957889832896	0	1	1	1	0	1	1	1	53	46	0
"TCGA-N8-A4PI-01A-21D-A28R-08"	0	0	0	0	61	0	1	2	3	58	2378	2	3	3	8	595	2	3	2	7	591	1	1	13	15	569	5	5	18	28	623	1	2	3	6	92	0.0983606557377049	0.214285714285714	0.147672552166934	1.45108695652174	0.0652173913043478	1	0	1	2	77	0.0327868852459016	0.133333333333333	0.135325131810193	0.985281385281385	0.025974025974026	0.0983606557377049	6	31	169	1023	0.434807299453571	1	1	1.17141226763904	0.470502353419363	Inf	1.14377098992484	2.35108481262327	0.206307295127042	0.571375816222921	1	3.02266950364315	0.910097346821913	0.659529086111133	1	1	0.89688264993177	0.608391608391609	1	1	55	52	0
"TCGA-N8-A4PL-01A-11D-A28R-08"	0	0	0	0	66	0	1	3	4	62	2542	1	3	3	7	550	1	2	0	3	611	2	3	14	19	676	6	6	21	33	705	1	0	1	2	98	0.0303030303030303	0.0606060606060606	0.139007092198582	0.435992578849722	0.0204081632653061	0	1	1	2	77	0.0303030303030303	0.105263157894737	0.113905325443787	0.924128503075871	0.025974025974026	0.0454545454545455	3	40	175	1206	0.921119112570644	1	1	0.517047882120123	0.134221344091174	Inf	0.550564784053156	0.986428571428571	0.662717927879081	1	1	0.984500303013884	0.450938775510204	0.946049706948654	1	1	0.417849173444148	1	1	1	63	59	0
"TCGA-N8-A4PM-01A-11D-A28R-08"	0	0	0	0	65	0	2	3	5	60	2460	3	4	1	8	544	0	7	0	7	597	0	8	19	27	642	1	4	13	18	677	0	0	0	0	80	0	0	0.118168389955687	0	0	0	1	1	2	77	0.0307692307692308	0.0740740740740741	0.11993769470405	0.617604617604618	0.025974025974026	0.0153846153846154	1	32	157	1162	0.984293577948803	1	1	0.231437008411007	0.0114703519856492	Inf	0.254584057131828	0	1	1	1	0	0.262539808917197	0.982215173690772	1	1	0.238901089173985	1	1	1	64	59	0
"TCGA-N8-A4PN-01A-11D-A28R-08"	0	0	0	0	63	0	2	1	3	60	2460	1	1	3	5	597	3	5	0	8	589	2	3	17	22	594	3	3	19	25	680	0	0	3	3	86	0.0476190476190476	0.12	0.126470588235294	0.948837209302326	0.0348837209302326	1	2	2	5	98	0.0793650793650794	0.227272727272727	0.164983164983165	1.37755102040816	0.0510204081632653	0.0952380952380952	6	35	184	1090	0.556027088367261	1	1	1.01551703304833	0.41129171045212	Inf	1.01325556733828	1.38478260869565	0.542745260037518	0.98313390921407	1	1.48045365828491	0.961654589371981	0.611291964630008	1	1	0.955495098178105	0.118881118881119	0.605042016806723	1	57	54	0
"TCGA-N8-A4PO-01A-11D-A28R-08"	0	0	0	0	87	0	0	2	2	85	3485	4	4	6	14	871	2	5	2	9	751	5	4	18	27	968	7	7	21	35	895	0	1	0	1	116	0.0114942528735632	0.0285714285714286	0.129608938547486	0.220443349753695	0.00862068965517241	0	1	1	2	124	0.0229885057471264	0.0740740740740741	0.128099173553719	0.578255675029869	0.0161290322580645	0.0114942528735632	1	50	240	1623	0.99905206918303	1	1	0.135320284482751	0.00674724555097332	Inf	0.152205882352941	0	1	1	1	0	0.199038461538462	0.995210445217905	1	1	0.178047866732629	1	1	1	86	84	0
"TCGA-N8-A4PP-01A-11D-A28R-08"	0	0	0	0	133	0	2	5	7	126	5166	3	7	8	18	1285	4	14	8	26	1201	10	13	25	48	1333	13	9	12	34	1347	5	3	1	9	187	0.0676691729323308	0.264705882352941	0.138827023014105	1.90673167662787	0.0481283422459893	2	5	1	8	193	0.0601503759398496	0.166666666666667	0.144786196549137	1.15112262521589	0.0414507772020725	0.0676691729323308	9	51	380	2300	0.485422552316446	1	1	1.06810143632258	0.526223562169504	Inf	1.05789473684211	2.14645308924485	0.0364433950768096	0.19953871830864	1	2.64656884301756	0.38122332859175	0.974771610518001	1	1	0.345956357646279	0.117538005190953	0.605042016806723	1	124	117	0
"TCGA-N8-A4PQ-01A-11D-A28R-08"	0	0	0	0	80	1	1	1	2	77	3157	3	2	0	5	718	2	0	3	5	757	9	4	22	35	825	4	11	17	32	857	2	3	0	5	110	0.0625	0.15625	0.128354725787631	1.21732954545455	0.0454545454545455	3	2	1	6	116	0.075	0.171428571428571	0.140606060606061	1.2192118226601	0.0517241379310345	0.075	6	46	226	1456	0.7158247088773	1	1	0.840402809645593	0.345893908069554	Inf	0.858747447243022	2.86249149081007	0.0229050729103566	0.163198644486291	1	4.02183502061207	0.190832766054005	0.99623865337986	1	1	0.169632559693345	0.148606811145511	0.605042016806723	1	74	71	0
"TCGA-N8-A56S-01A-11D-A28R-08"	0	0	0	0	60	1	0	4	4	55	2255	1	4	1	6	526	1	3	0	4	469	0	4	20	24	642	2	5	14	21	618	1	0	2	3	70	0.05	0.142857142857143	0.113268608414239	1.26122448979592	0.0428571428571429	0	0	3	3	74	0.05	0.125	0.115264797507788	1.08445945945946	0.0405405405405405	0.1	6	30	144	1116	0.230361555007806	1	1	1.5493808143934	0.61984662661444	Inf	1.45833333333333	4.375	0.216673306597661	0.571375816222921	1	7.72656119766946	1.28676470588235	0.35269951015205	1	1	1.33587184572601	0.0800865800865801	0.605042016806723	1	54	49	0
"TCGA-N9-A4PZ-01A-22D-A28R-08"	0	0	0	0	82	0	0	0	0	82	3362	2	7	5	14	756	1	7	1	9	724	5	10	21	36	929	4	6	13	23	953	1	2	1	4	115	0.0487804878048781	0.173913043478261	0.120671563483736	1.44120982986767	0.0347826086956522	0	0	0	0	96	0	0	0.103336921420883	0	0	0.024390243902439	2	41	211	1671	0.960530448876993	1	1	0.386447195941255	0.0660703752879806	Inf	0.414857268819575	0.991047919957873	0.657874680465348	1	1	0.989934038722501	0.262336214106496	0.98211455104699	1	1	0.240088065324621	1	1	1	80	80	0
"TCGA-N9-A4Q1-01A-11D-A28R-08"	0	0	0	0	46	0	3	3	6	40	1640	0	1	1	2	396	0	3	2	5	463	0	4	7	11	347	6	6	10	22	434	0	1	0	1	80	0.0217391304347826	0.0454545454545455	0.184331797235023	0.246590909090909	0.0125	0	1	1	2	55	0.0434782608695652	0.181818181818182	0.15850144092219	1.14710743801653	0.0363636363636364	0.0217391304347826	1	22	135	646	0.986800407660894	1	1	0.217757481260467	0.0106368005685509	Inf	0.251529790660225	0	1	1	1	0	0.340305010893246	0.959719395028205	1	1	0.299375142943193	1	1	1	45	39	0
"TCGA-N9-A4Q3-01A-11D-A28R-08"	0	0	0	0	47	0	2	1	3	44	1804	0	1	1	2	418	2	3	1	6	418	2	2	12	16	484	4	5	11	20	484	1	1	3	5	68	0.106382978723404	0.25	0.140495867768595	1.77941176470588	0.0735294117647059	2	0	3	5	68	0.106382978723404	0.3125	0.140495867768595	2.22426470588235	0.0735294117647059	0.191489361702128	9	20	136	832	0.0170035287597004	0.323067046434308	0.969201139302923	2.74914449425743	1.24899456691467	Inf	2.20892494929006	3.55882352941176	0.0410009649491336	0.19953871830864	1	6.09911560859303	1.85677749360614	0.0977846620293771	1	1	2.15703512091081	0.369849964277209	1	1	38	35	0
"TCGA-N9-A4Q4-01A-11D-A28R-08"	0	0	0	0	52	1	1	5	6	45	1845	1	1	1	3	370	2	2	0	4	441	2	6	10	18	543	3	8	9	20	491	1	2	0	3	57	0.0576923076923077	0.15	0.116089613034623	1.29210526315789	0.0526315789473684	1	0	0	1	57	0.0192307692307692	0.0555555555555556	0.104972375690608	0.529239766081871	0.0175438596491228	0.0384615384615385	2	22	114	920	0.759768875239225	1	1	0.733843835026094	0.121534030310304	Inf	0.755847953216374	3.6280701754386	0.0986572915125025	0.37489770774751	1	5.36496596484713	0	1	1	1	0	0.428571428571429	1	1	50	43	0
"TCGA-N9-A4Q7-01A-11D-A28R-08"	0	1	0	1	371	1	0	2	2	368	15088	1	7	1	9	3587	0	2	1	3	3827	80	17	79	176	3748	70	18	92	180	3926	50	8	41	99	627	0.266846361185984	0.55	0.159704533876719	3.44385964912281	0.157894736842105	67	7	35	109	555	0.293800539083558	0.619318181818182	0.148078975453575	4.18235053235053	0.196396396396396	0.520215633423181	193	128	1182	6492	3.70075008388314e-70	2.10942754781339e-68	2.10942754781339e-68	8.27794183055759	6.77152924575488	Inf	3.9035216724386	5.06406091370558	4.4715345385743e-63	2.54877468698735e-61	2.54877468698735e-61	19.4501612581166	2.88550479413424	6.31069383433921e-19	3.59709548557335e-17	3.59709548557335e-17	4.39288302084713	8.00168761821055e-05	0.00228048097119001	0.00456096194238001	178	175	144
"TCGA-N9-A4Q8-01A-31D-A28R-08"	0	0	0	0	58	0	1	3	4	54	2214	1	3	0	4	498	6	3	1	10	563	5	3	13	21	577	2	6	11	19	576	0	2	1	3	85	0.0517241379310345	0.157894736842105	0.147569444444444	1.06996904024768	0.0352941176470588	3	0	1	4	80	0.0689655172413793	0.19047619047619	0.138648180242634	1.37380952380952	0.05	0.0862068965517241	5	26	165	988	0.465987205783433	1	1	1.15134077890209	0.416151450750841	Inf	1.12707722385142	2.9948051948052	0.0669528463952684	0.292737361319236	1	4.48222220793674	0.582323232323232	0.876345281851257	1	1	0.544581862886328	1	1	1	53	49	0
"TCGA-NA-A4QV-01A-11D-A28R-08"	0	1	0	1	55	0	1	4	5	50	2050	1	3	1	5	491	1	2	1	4	488	6	5	12	23	511	4	4	10	18	560	0	0	2	2	59	0.0363636363636364	0.111111111111111	0.105357142857143	1.05461393596987	0.0338983050847458	5	0	1	6	68	0.109090909090909	0.260869565217391	0.13307240704501	1.96035805626598	0.0882352941176471	0.145454545454545	8	24	127	944	0.0332199830642559	0.396754940234723	1	2.47484062835634	1.09694270645168	Inf	2.10826771653543	4.21653543307087	0.00382118480441225	0.0544518834628746	0.217807533851498	7.40862144585688	1.14996420901933	0.496852883531004	1	1	1.17344852558393	0.619269619269619	1	1	47	42	0
"TCGA-NA-A4QW-01A-11D-A28R-08"	0	0	0	0	66	0	1	3	4	62	2542	0	2	0	2	620	1	2	0	3	599	5	3	28	36	712	3	4	14	21	611	2	1	1	4	85	0.0606060606060606	0.19047619047619	0.13911620294599	1.36918767507003	0.0470588235294118	2	1	6	9	97	0.136363636363636	0.25	0.13623595505618	1.83505154639175	0.0927835051546392	0.166666666666667	11	39	182	1141	0.0804349474965071	0.654970286757272	1	1.76736182386247	0.909232932765728	Inf	1.59923076923077	3.63461538461538	0.0163639044167182	0.160540603246721	0.932742551752937	6.25496200682237	1.21153846153846	0.360592468426188	1	1	1.25362126189139	0.428307982231794	1	1	55	51	0
"TCGA-NA-A4QX-01A-11D-A28R-08"	0	0	0	0	41	1	1	4	5	35	1435	2	1	0	3	328	0	4	0	4	334	2	3	9	14	384	0	2	12	14	389	0	0	1	1	39	0.024390243902439	0.0714285714285714	0.10025706940874	0.712454212454212	0.0256410256410256	0	0	0	0	48	0	0	0.125	0	0	0.024390243902439	1	22	87	686	0.935098304221622	1	1	0.358727978983708	0.0174362108466908	Inf	0.386306846576712	0	1	1	1	0	0.423097974822113	0.917949058402111	1	1	0.394579875343395	1	1	1	40	34	0
"TCGA-NA-A4QY-01A-11D-A28R-08"	0	0	0	0	56	0	2	4	6	50	2050	3	3	2	8	505	2	2	1	5	480	3	3	9	15	507	5	2	15	22	558	2	1	1	4	91	0.0714285714285714	0.181818181818182	0.163082437275986	1.11488511488511	0.043956043956044	1	0	0	1	76	0.0178571428571429	0.0666666666666667	0.149901380670611	0.444736842105263	0.0131578947368421	0.0714285714285714	4	28	167	898	0.760925668270192	1	1	0.768348387628083	0.24370214378985	Inf	0.797155688622755	2.39146706586826	0.11905308141937	0.404537970303706	1	3.22141798535057	0.265718562874251	0.982893412547003	1	1	0.23398263002264	0.523809523809524	1	1	52	46	0
"TCGA-NA-A4R0-01A-11D-A28R-08"	0	0	0	0	72	0	0	4	4	68	2788	1	5	1	7	657	2	6	1	9	589	3	4	14	21	772	7	12	12	31	770	2	3	1	6	90	0.0833333333333333	0.193548387096774	0.116883116883117	1.65591397849462	0.0666666666666667	0	0	3	3	93	0.0416666666666667	0.142857142857143	0.120466321243523	1.18586789554531	0.032258064516129	0.0833333333333333	6	30	183	1359	0.255861693732081	1	1	1.48481142478438	0.595937883817619	Inf	1.40437158469945	1.68524590163934	0.338711526554237	0.689519893342554	1	1.85558902918659	1.29634300126103	0.376476682898941	1	1	1.34993198241904	0.619909502262444	1	1	66	62	0
"TCGA-NA-A4R1-01A-11D-A28R-08"	0	0	0	0	158	0	6	14	20	138	5658	0	12	0	12	1234	2	11	0	13	1331	1	3	48	52	1461	0	8	53	61	1632	0	0	1	1	209	0.00632911392405063	0.0163934426229508	0.128063725490196	0.128010040003138	0.00478468899521531	0	0	2	2	167	0.0126582278481013	0.0384615384615385	0.114305270362765	0.336480884385076	0.0119760479041916	0.0189873417721519	3	99	376	2717	0.999764516660692	1	1	0.219032023844691	0.058510877066297	Inf	0.241943053817272	0	1	1	1	0	0.244338529597641	0.999737693302177	1	1	0.22126684904526	0.1	0.605042016806723	1	155	135	0
"TCGA-NA-A5I1-01A-21D-A28R-08"	0	0	0	0	60	0	0	3	3	57	2337	3	3	1	7	549	4	4	4	12	559	7	3	14	24	575	4	5	5	14	654	0	0	0	0	88	0	0	0.134556574923547	0	0	0	0	0	0	66	0	0	0.114782608695652	0	0	0	0	30	154	1075	1	1	1	0	0	Inf	0	0	1	1	1	0	0	1	1	1	0	1	1	1	60	57	0
"TCGA-ND-A4W6-01A-11D-A28R-08"	0	1	0	1	100	0	0	2	2	98	4018	3	1	1	5	929	1	4	1	6	989	5	4	20	29	1008	14	6	38	58	1092	8	1	9	18	147	0.18	0.310344827586207	0.134615384615385	2.30541871921182	0.122448979591837	4	1	4	9	137	0.09	0.310344827586207	0.135912698412698	2.28341303800654	0.0656934306569343	0.25	25	52	284	1816	2.59611134495801e-05	0.000739891733313033	0.00147978346662607	3.07200044419503	1.95344314972885	Inf	2.40076824583867	4.67012601927354	9.04335758958299e-07	2.57735691303115e-05	5.1547138260623e-05	10.9396890144514	1.65735794074794	0.0468056763337343	1	1	1.84657087553676	1	1	1	75	73	15
"TCGA-ND-A4WA-01A-12D-A28R-08"	0	0	0	0	65	0	1	5	6	59	2419	1	3	1	5	593	2	3	2	7	553	2	6	19	27	672	1	4	15	20	601	1	0	0	1	72	0.0153846153846154	0.05	0.119800332778702	0.417361111111111	0.0138888888888889	1	0	1	2	84	0.0307692307692308	0.0740740740740741	0.125	0.592592592592593	0.0238095238095238	0.0461538461538462	3	34	156	1117	0.847038415702844	1	1	0.631975878224126	0.162795575893209	Inf	0.661642411642412	5.44017094017094	0.0420081512228716	0.19953871830864	1	14.2640708203557	0.24000754147813	0.987854004207492	1	1	0.217123920337173	1	1	1	62	56	0
"TCGA-ND-A4WC-01A-21D-A28R-08"	0	0	3	3	4717	12	14	3	17	4688	192208	18	283	381	682	52123	28	295	370	693	52434	5	693	943	1641	43462	6	744	922	1672	44189	0	600	86	686	7796	0.145431418274327	0.410287081339713	0.176423996922311	2.32557411971788	0.0879938429964084	0	555	84	639	7508	0.135467458130167	0.389396709323583	0.172748607979384	2.25412357227245	0.0851092168353756	0.0360398558405766	170	1706	15304	72347	1	1	1	0.471079281765246	0.410364824215252	Inf	0.519000774077488	0	1	1	1	0	0.522061904648454	1	1	1	0.474136350709199	4.06346203496945e-54	2.31617335993259e-52	2.31617335993259e-52	4547	4518	0
"TCGA-ND-A4WF-01A-11D-A28R-08"	0	0	0	0	78	0	0	1	1	77	3157	0	7	1	8	773	2	9	2	13	761	3	2	16	21	819	8	6	21	35	804	1	0	0	1	119	0.0128205128205128	0.0285714285714286	0.148009950248756	0.193037214885954	0.00840336134453781	0	1	3	4	118	0.0512820512820513	0.19047619047619	0.144078144078144	1.32203389830508	0.0338983050847458	0.0512820512820513	4	44	237	1386	0.932585224251869	1	1	0.531810159318596	0.172999026535213	Inf	0.570675105485232	0.622554660529344	0.824020062656255	1	1	0.58497017865174	0.555251453985631	0.920998890746364	1	1	0.516174795430564	0.523809523809524	1	1	74	73	0
"TCGA-NF-A4WU-01A-11D-A28R-08"	0	0	0	0	40	0	0	1	1	39	1599	1	2	1	4	364	2	0	1	3	379	0	2	14	16	420	2	5	9	16	436	0	0	1	1	67	0.025	0.0625	0.153669724770642	0.406716417910448	0.0149253731343284	0	0	0	0	48	0	0	0.114285714285714	0	0	0.025	1	24	115	741	0.972186481528125	1	1	0.268729836777103	0.0131508728972267	Inf	0.297739130434783	0	1	1	1	0	0.323629489603025	0.963105662319277	1	1	0.293149639708288	1	1	1	39	38	0
"TCGA-NF-A4WX-01A-11D-A28R-08"	0	0	0	0	44	0	0	4	4	40	1640	0	0	1	1	365	2	4	0	6	427	0	4	12	16	408	2	1	14	17	440	0	0	2	2	69	0.0454545454545455	0.117647058823529	0.156818181818182	0.750213128729753	0.0289855072463768	0	0	0	0	42	0	0	0.102941176470588	0	0	0.0454545454545455	2	26	111	737	0.896159979427387	1	1	0.511052314139402	0.0853392101697348	Inf	0.545688545688546	0	1	1	1	0	0.587664587664588	0.871034970939603	1	1	0.553608734424753	0.333333333333333	1	1	42	38	0
"TCGA-NF-A4X2-01A-11D-A28R-08"	0	0	0	0	121	0	5	6	11	110	4510	4	3	3	10	1104	1	6	4	11	981	6	9	18	33	1159	10	18	28	56	1266	0	0	1	1	134	0.00826446280991736	0.0178571428571429	0.105845181674566	0.168710021321962	0.00746268656716418	2	1	1	4	134	0.0330578512396694	0.121212121212121	0.115616911130285	1.04839439167797	0.0298507462686567	0.0330578512396694	4	58	268	2157	0.921083872503692	1	1	0.555175632041327	0.182550610862918	Inf	0.583774675012037	1.13106343283582	0.542423659283382	0.98313390921407	1	1.14970557140468	0.393413367942894	0.968684794287443	1	1	0.36594299190812	1	1	1	117	106	0
"TCGA-NF-A5CP-01A-12D-A28R-08"	0	0	0	0	77	0	1	3	4	73	2993	1	5	2	8	700	3	1	1	5	657	6	4	23	33	816	4	3	20	27	820	1	0	0	1	116	0.012987012987013	0.037037037037037	0.141463414634146	0.261813537675607	0.00862068965517241	1	0	0	1	96	0.012987012987013	0.0303030303030303	0.117647058823529	0.257575757575758	0.0104166666666667	0.025974025974026	2	51	212	1424	0.993948790148668	1	1	0.263540392745137	0.0453291538029436	Inf	0.291206835172659	1.54339622641509	0.380614437552418	0.748104239327166	1	1.67860395428827	0	1	1	1	0	0.333333333333333	1	1	75	71	0
"TCGA-NG-A4VU-01A-11D-A28R-08"	0	0	0	0	45	0	0	2	2	43	1763	0	5	0	5	392	0	1	0	1	403	4	1	10	15	466	4	3	15	22	502	1	0	4	5	67	0.111111111111111	0.227272727272727	0.133466135458167	1.70284938941655	0.0746268656716418	1	0	2	3	49	0.0666666666666667	0.2	0.105150214592275	1.90204081632653	0.0612244897959184	0.177777777777778	8	25	116	852	0.0417636779194445	0.396754940234723	1	2.34780042563922	1.04226190878041	Inf	2.02298850574713	2.08620689655172	0.250603428167948	0.571375816222921	1	2.44516130902083	2.00275862068966	0.0751602982447439	1	1	2.31679369373949	0.131934731934732	0.605042016806723	1	37	35	0
"TCGA-NG-A4VW-01A-11D-A28R-08"	0	0	0	0	59	1	2	2	4	54	2214	0	3	2	5	553	0	0	2	2	476	1	2	23	26	597	1	3	17	21	588	0	1	0	1	74	0.0169491525423729	0.0476190476190476	0.125850340136054	0.378378378378378	0.0135135135135135	0	0	3	3	81	0.0508474576271186	0.115384615384615	0.135678391959799	0.85042735042735	0.037037037037037	0.0508474576271186	3	39	155	1030	0.923956909998435	1	1	0.511388985417637	0.132449393894617	Inf	0.546082949308756	0	1	1	1	0	0.573387096774194	0.907803214982402	1	1	0.539017387380757	0.142857142857143	0.605042016806723	1	56	51	0
"TCGA-QM-A5NM-01A-11D-A28R-08"	0	0	0	0	59	0	0	1	1	58	2378	2	2	3	7	507	1	5	0	6	557	5	7	12	24	634	1	2	18	21	680	0	0	2	2	100	0.0338983050847458	0.0952380952380952	0.147058823529412	0.647619047619048	0.02	1	1	0	2	64	0.0338983050847458	0.0833333333333333	0.100946372239748	0.825520833333333	0.03125	0.0508474576271186	3	33	164	1150	0.843033433254348	1	1	0.637653993379163	0.164124124350555	Inf	0.667682926829268	1.33536585365854	0.551934826225443	0.98313390921407	1	1.40202791963039	0.534146341463415	0.902427696589834	1	1	0.501072583222164	1	1	1	56	55	0
"TCGA-QN-A5NN-01A-11D-A28R-08"	0	0	0	0	87	0	0	9	9	78	3198	3	8	4	15	713	2	3	3	8	764	5	5	15	25	839	4	2	24	30	882	1	0	2	3	120	0.0344827586206897	0.1	0.136054421768707	0.735	0.025	0	0	0	0	100	0	0	0.119189511323004	0	0	0.0344827586206897	3	45	220	1501	0.953377738982591	1	1	0.454999783945905	0.118848041732614	Inf	0.488920454545455	0.869191919191919	0.708619826061305	1	1	0.852938962849994	0.401165501165501	0.966871097950877	1	1	0.368941038502712	1	1	1	84	75	0
"Totals"	0	4	5	9	9780	27	102	345	447	9306	381546	115	551	491	1157	95845	122	569	460	1151	96581	300	994	2134	3428	93841	318	1104	2148	3570	95279	104	652	206	962	14287	0.0983640081799591	0.269467787114846	0.149949096862897	1.79706175463816	0.0673339399454049	122	599	187	908	13741	0.0928425357873211	0.26487747957993	0.146428533370275	1.80891984289791	0.0660796157484899	0.0632924335378323	619	4281	28028	161092	0.999993692621936	NA	NA	0.831051382539546	0.77264551518586	Inf	0.852393087961601	2.46754632330222	2.40755471147185e-40	NA	NA	3.31360842801091	0.61928596525247	1	NA	NA	0.580816910270252	2.12082246227492e-13	NA	NA	9161	8687	NA
