[1] "R version 2.15.3 (2013-03-01)"
[1] "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "opt:  MUTATION_RATE"
[1] "vtyp==survival in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==binary in table1 table generation"
                          Clinical feature           
DAYS_TO_DEATH_OR_LAST_FUP "DAYS_TO_DEATH_OR_LAST_FUP"
AGE                       "AGE"                      
AGE_mutation.rate         "AGE_mutation rate"        
PATHOLOGIC_STAGE          "PATHOLOGIC_STAGE"         
PATHOLOGY_T_STAGE         "PATHOLOGY_T_STAGE"        
PATHOLOGY_M_STAGE         "PATHOLOGY_M_STAGE"        
GENDER                    "GENDER"                   
RADIATION_THERAPY         "RADIATION_THERAPY"        
                          Statistical test             Significant variables
DAYS_TO_DEATH_OR_LAST_FUP "Cox regression test"        "N=0"                
AGE                       "Spearman correlation test"  "N=1"                
AGE_mutation.rate         "Linear Regression Analysis" "N=0"                
PATHOLOGIC_STAGE          "Kruskal-Wallis test"        "N=0"                
PATHOLOGY_T_STAGE         "Spearman correlation test"  "N=0"                
PATHOLOGY_M_STAGE         "Wilcoxon test"              "N=0"                
GENDER                    "Wilcoxon test"              "N=0"                
RADIATION_THERAPY         "Wilcoxon test"              "N=0"                
                          Associated with
DAYS_TO_DEATH_OR_LAST_FUP " "            
AGE                       "older"        
AGE_mutation.rate         " "            
PATHOLOGIC_STAGE          " "            
PATHOLOGY_T_STAGE         " "            
PATHOLOGY_M_STAGE         " "            
GENDER                    " "            
RADIATION_THERAPY         " "            
                          &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
DAYS_TO_DEATH_OR_LAST_FUP " "                                                                                       
AGE                       "N=1"                                                                                     
AGE_mutation.rate         " "                                                                                       
PATHOLOGIC_STAGE          " "                                                                                       
PATHOLOGY_T_STAGE         " "                                                                                       
PATHOLOGY_M_STAGE         " "                                                                                       
GENDER                    " "                                                                                       
RADIATION_THERAPY         " "                                                                                       
                          Associated with      
DAYS_TO_DEATH_OR_LAST_FUP " "             " "  
AGE                       "younger"       "N=0"
AGE_mutation.rate         " "             " "  
PATHOLOGIC_STAGE          " "             " "  
PATHOLOGY_T_STAGE         " "             " "  
PATHOLOGY_M_STAGE         " "             " "  
GENDER                    " "             " "  
RADIATION_THERAPY         " "             " "  
[1] "vtyp==survival in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==binary in basici table generation"
