name nmut n_coding n_flank n_coding_nonsilent fracflank callscheme callscheme_name N_tot nsil_tot nnon_tot rate_sil rate_non TCGA-A1-A0SB-01A-11D-A142-09 17 17 0 14 0 1 exome+100bp flanks 34834024 3 12 8.612269e-08 3.444908e-07 TCGA-A1-A0SD-01A-11D-A10Y-09 27 27 0 24 0 1 exome+100bp flanks 34834024 3 21 8.612269e-08 6.028589e-07 TCGA-A1-A0SE-01A-11D-A099-09 26 25 1 17 3.846154e-02 1 exome+100bp flanks 34834024 7 16 2.009530e-07 4.593210e-07 TCGA-A1-A0SF-01A-11D-A142-09 38 36 2 30 5.263158e-02 1 exome+100bp flanks 34834024 5 27 1.435378e-07 7.751042e-07 TCGA-A1-A0SG-01A-11D-A142-09 32 31 1 26 3.125000e-02 1 exome+100bp flanks 34834024 5 25 1.435378e-07 7.176891e-07 TCGA-A1-A0SH-01A-11D-A099-09 94 88 6 70 6.382979e-02 1 exome+100bp flanks 34834024 18 63 5.167362e-07 1.808577e-06 TCGA-A1-A0SI-01A-11D-A142-09 193 185 8 136 4.145078e-02 1 exome+100bp flanks 34834024 47 126 1.349256e-06 3.617153e-06 TCGA-A1-A0SJ-01A-11D-A099-09 31 28 3 24 9.677419e-02 1 exome+100bp flanks 34834024 4 20 1.148303e-07 5.741513e-07 TCGA-A1-A0SK-01A-12D-A099-09 161 130 31 82 1.925466e-01 1 exome+100bp flanks 34834024 30 64 8.612269e-07 1.837284e-06 TCGA-A1-A0SM-01A-11D-A099-09 32 26 6 21 1.875000e-01 1 exome+100bp flanks 34834024 5 20 1.435378e-07 5.741513e-07 TCGA-A1-A0SN-01A-11D-A142-09 50 49 1 38 2.000000e-02 1 exome+100bp flanks 34834024 11 35 3.157832e-07 1.004765e-06 TCGA-A1-A0SP-01A-11D-A099-09 44 42 2 32 4.545455e-02 1 exome+100bp flanks 34834024 8 28 2.296605e-07 8.038118e-07 TCGA-A1-A0SQ-01A-21D-A142-09 26 26 0 19 0 1 exome+100bp flanks 34834024 7 19 2.009530e-07 5.454437e-07 TCGA-A2-A04N-01A-11D-A10Y-09 41 41 0 32 0 1 exome+100bp flanks 34834024 8 28 2.296605e-07 8.038118e-07 TCGA-A2-A04P-01A-31D-A128-09 112 108 4 88 3.571429e-02 1 exome+100bp flanks 34834024 16 79 4.593210e-07 2.267898e-06 TCGA-A2-A04Q-01A-21W-A050-09 12 11 1 6 8.333333e-02 1 exome+100bp flanks 34834024 5 6 1.435378e-07 1.722454e-07 TCGA-A2-A04R-01A-41D-A117-09 79 75 4 60 5.063291e-02 1 exome+100bp flanks 34834024 13 57 3.731983e-07 1.636331e-06 TCGA-A2-A04T-01A-21W-A050-09 93 82 11 66 1.182796e-01 1 exome+100bp flanks 34834024 16 62 4.593210e-07 1.779869e-06 TCGA-A2-A04U-01A-11D-A10Y-09 55 54 1 45 1.818182e-02 1 exome+100bp flanks 34834024 9 43 2.583681e-07 1.234425e-06 TCGA-A2-A04V-01A-21W-A050-09 34 32 2 25 5.882353e-02 1 exome+100bp flanks 34834024 6 21 1.722454e-07 6.028589e-07 TCGA-A2-A04W-01A-31D-A10Y-09 107 104 3 80 2.803738e-02 0 coding only 34834024 21 77 6.028589e-07 2.210482e-06 TCGA-A2-A04X-01A-21W-A050-09 30 27 3 18 1.000000e-01 1 exome+100bp flanks 34834024 9 18 2.583681e-07 5.167362e-07 TCGA-A2-A04Y-01A-21W-A050-09 47 46 1 43 2.127660e-02 1 exome+100bp flanks 34834024 3 39 8.612269e-08 1.119595e-06 TCGA-A2-A0CK-01A-11D-A228-09 26 22 4 12 1.538462e-01 1 exome+100bp flanks 34834024 10 12 2.870756e-07 3.444908e-07 TCGA-A2-A0CL-01A-11D-A10Y-09 23 19 4 15 1.739130e-01 1 exome+100bp flanks 34834024 4 13 1.148303e-07 3.731983e-07 TCGA-A2-A0CM-01A-31W-A050-09 54 53 1 43 1.851852e-02 1 exome+100bp flanks 34834024 9 38 2.583681e-07 1.090887e-06 TCGA-A2-A0CO-01A-13D-A228-09 37 28 9 18 2.432432e-01 1 exome+100bp flanks 34834024 9 16 2.583681e-07 4.593210e-07 TCGA-A2-A0CP-01A-11W-A050-09 82 77 5 73 6.097561e-02 1 exome+100bp flanks 34834024 3 65 8.612269e-08 1.865992e-06 TCGA-A2-A0CQ-01A-21W-A050-09 37 36 1 25 2.702703e-02 1 exome+100bp flanks 34834024 9 22 2.583681e-07 6.315664e-07 TCGA-A2-A0CR-01A-11D-A228-09 120 108 12 90 1.000000e-01 1 exome+100bp flanks 34834024 18 84 5.167362e-07 2.411435e-06 TCGA-A2-A0CS-01A-11D-A10Y-09 34 33 1 26 2.941176e-02 1 exome+100bp flanks 34834024 7 25 2.009530e-07 7.176891e-07 TCGA-A2-A0CT-01A-31W-A071-09 77 76 1 56 1.298701e-02 1 exome+100bp flanks 34834024 19 52 5.454437e-07 1.492793e-06 TCGA-A2-A0CU-01A-12W-A050-09 40 38 2 32 5.000000e-02 1 exome+100bp flanks 34834024 6 27 1.722454e-07 7.751042e-07 TCGA-A2-A0CV-01A-31D-A10Y-09 22 22 0 19 0 1 exome+100bp flanks 34834024 3 17 8.612269e-08 4.880286e-07 TCGA-A2-A0CW-01A-21D-A10Y-09 60 57 3 49 5.000000e-02 1 exome+100bp flanks 34834024 8 40 2.296605e-07 1.148303e-06 TCGA-A2-A0CX-01A-21W-A019-09 203 194 9 149 4.433498e-02 1 exome+100bp flanks 34834024 43 139 1.234425e-06 3.990352e-06 TCGA-A2-A0CZ-01A-11W-A050-09 16 15 1 13 6.250000e-02 1 exome+100bp flanks 34834024 2 12 5.741513e-08 3.444908e-07 TCGA-A2-A0D0-01A-11W-A019-09 66 62 4 46 6.060606e-02 1 exome+100bp flanks 34834024 16 43 4.593210e-07 1.234425e-06 TCGA-A2-A0D1-01A-11W-A050-09 75 71 4 53 5.333333e-02 1 exome+100bp flanks 34834024 17 49 4.880286e-07 1.406671e-06 TCGA-A2-A0D2-01A-21W-A050-09 80 78 2 61 2.500000e-02 1 exome+100bp flanks 34834024 16 55 4.593210e-07 1.578916e-06 TCGA-A2-A0D3-01A-11D-A10Y-09 27 26 1 19 3.703704e-02 1 exome+100bp flanks 34834024 7 17 2.009530e-07 4.880286e-07 TCGA-A2-A0D4-01A-11W-A019-09 29 29 0 24 0 1 exome+100bp flanks 34834024 5 24 1.435378e-07 6.889816e-07 TCGA-A2-A0EM-01A-11W-A050-09 25 25 0 25 0 1 exome+100bp flanks 34834024 0 22 0 6.315664e-07 TCGA-A2-A0EN-01A-13D-A099-09 36 32 4 27 1.111111e-01 1 exome+100bp flanks 34834024 5 23 1.435378e-07 6.602740e-07 TCGA-A2-A0EO-01A-11W-A050-09 30 29 1 22 3.333333e-02 1 exome+100bp flanks 34834024 7 20 2.009530e-07 5.741513e-07 TCGA-A2-A0EP-01A-52D-A22X-09 9 3 6 3 6.666667e-01 1 exome+100bp flanks 34834024 0 3 0 8.612269e-08 TCGA-A2-A0EQ-01A-11W-A050-09 82 78 4 62 4.878049e-02 1 exome+100bp flanks 34834024 16 58 4.593210e-07 1.665039e-06 TCGA-A2-A0ER-01A-21W-A050-09 28 26 2 21 7.142857e-02 1 exome+100bp flanks 34834024 5 20 1.435378e-07 5.741513e-07 TCGA-A2-A0ES-01A-11D-A10Y-09 5 4 1 3 2.000000e-01 1 exome+100bp flanks 34834024 1 3 2.870756e-08 8.612269e-08 TCGA-A2-A0ET-01A-31D-A045-09 32 28 4 21 1.250000e-01 1 exome+100bp flanks 34834024 7 18 2.009530e-07 5.167362e-07 TCGA-A2-A0EU-01A-22W-A071-09 40 40 0 33 0 1 exome+100bp flanks 34834024 7 32 2.009530e-07 9.186421e-07 TCGA-A2-A0EV-01A-11W-A050-09 59 58 1 49 1.694915e-02 1 exome+100bp flanks 34834024 9 47 2.583681e-07 1.349256e-06 TCGA-A2-A0EW-01A-21D-A10Y-09 14 13 1 10 7.142857e-02 1 exome+100bp flanks 34834024 3 10 8.612269e-08 2.870756e-07 TCGA-A2-A0EX-01A-21W-A050-09 28 25 3 22 1.071429e-01 1 exome+100bp flanks 34834024 3 21 8.612269e-08 6.028589e-07 TCGA-A2-A0EY-01A-11W-A050-09 210 200 10 138 4.761905e-02 1 exome+100bp flanks 34834024 61 131 1.751161e-06 3.760691e-06 TCGA-A2-A0ST-01A-12D-A099-09 8 7 1 4 1.250000e-01 1 exome+100bp flanks 34834024 3 4 8.612269e-08 1.148303e-07 TCGA-A2-A0SU-01A-11D-A099-09 23 23 0 17 0 1 exome+100bp flanks 34834024 6 16 1.722454e-07 4.593210e-07 TCGA-A2-A0SV-01A-11D-A099-09 35 35 0 24 0 1 exome+100bp flanks 34834024 11 23 3.157832e-07 6.602740e-07 TCGA-A2-A0SW-01A-11D-A099-09 54 51 3 41 5.555556e-02 1 exome+100bp flanks 34834024 8 35 2.296605e-07 1.004765e-06 TCGA-A2-A0SX-01A-12D-A099-09 24 23 1 18 4.166667e-02 1 exome+100bp flanks 34834024 5 17 1.435378e-07 4.880286e-07 TCGA-A2-A0SY-01A-31D-A099-09 131 128 3 98 2.290076e-02 0 coding only 34834024 23 87 6.602740e-07 2.497558e-06 TCGA-A2-A0T0-01A-22D-A099-09 171 163 8 131 4.678363e-02 1 exome+100bp flanks 34834024 28 121 8.038118e-07 3.473615e-06 TCGA-A2-A0T1-01A-21D-A099-09 16 16 0 11 0 1 exome+100bp flanks 34834024 5 11 1.435378e-07 3.157832e-07 TCGA-A2-A0T2-01A-11W-A097-09 34 30 4 22 1.176471e-01 1 exome+100bp flanks 34834024 7 20 2.009530e-07 5.741513e-07 TCGA-A2-A0T3-01A-21D-A10Y-09 36 31 5 21 1.388889e-01 1 exome+100bp flanks 34834024 8 17 2.296605e-07 4.880286e-07 TCGA-A2-A0T4-01A-31D-A099-09 31 30 1 23 3.225806e-02 1 exome+100bp flanks 34834024 7 21 2.009530e-07 6.028589e-07 TCGA-A2-A0T5-01A-21D-A099-09 1556 1399 157 1067 1.008997e-01 1 exome+100bp flanks 34834024 306 990 8.784515e-06 2.842049e-05 TCGA-A2-A0T6-01A-11D-A099-09 119 110 9 89 7.563025e-02 1 exome+100bp flanks 34834024 19 77 5.454437e-07 2.210482e-06 TCGA-A2-A0T7-01A-21D-A099-09 23 22 1 17 4.347826e-02 1 exome+100bp flanks 34834024 4 15 1.148303e-07 4.306135e-07 TCGA-A2-A0YC-01A-11D-A117-09 18 18 0 16 0 1 exome+100bp flanks 34834024 2 15 5.741513e-08 4.306135e-07 TCGA-A2-A0YD-01A-11D-A10G-09 64 61 3 43 4.687500e-02 1 exome+100bp flanks 34834024 17 39 4.880286e-07 1.119595e-06 TCGA-A2-A0YE-01A-11D-A10G-09 51 40 11 29 2.156863e-01 1 exome+100bp flanks 34834024 9 25 2.583681e-07 7.176891e-07 TCGA-A2-A0YF-01A-21D-A10G-09 28 25 3 15 1.071429e-01 1 exome+100bp flanks 34834024 9 14 2.583681e-07 4.019059e-07 TCGA-A2-A0YG-01A-21D-A10G-09 51 50 1 37 1.960784e-02 1 exome+100bp flanks 34834024 12 32 3.444908e-07 9.186421e-07 TCGA-A2-A0YH-01A-11D-A10G-09 60 59 1 47 1.666667e-02 1 exome+100bp flanks 34834024 12 42 3.444908e-07 1.205718e-06 TCGA-A2-A0YI-01A-31D-A10M-09 13 13 0 9 0 1 exome+100bp flanks 34834024 4 9 1.148303e-07 2.583681e-07 TCGA-A2-A0YJ-01A-11D-A10G-09 54 53 1 46 1.851852e-02 1 exome+100bp flanks 34834024 6 44 1.722454e-07 1.263133e-06 TCGA-A2-A0YK-01A-22D-A117-09 195 187 8 134 4.102564e-02 1 exome+100bp flanks 34834024 52 127 1.492793e-06 3.645861e-06 TCGA-A2-A0YL-01A-21D-A10G-09 13 13 0 8 0 1 exome+100bp flanks 34834024 5 8 1.435378e-07 2.296605e-07 TCGA-A2-A0YM-01A-11D-A10G-09 71 67 4 50 5.633803e-02 1 exome+100bp flanks 34834024 17 48 4.880286e-07 1.377963e-06 TCGA-A2-A0YT-01A-11D-A10G-09 53 50 3 41 5.660377e-02 1 exome+100bp flanks 34834024 8 38 2.296605e-07 1.090887e-06 TCGA-A2-A1FV-01A-11D-A13L-09 40 37 3 31 7.500000e-02 1 exome+100bp flanks 34834024 5 31 1.435378e-07 8.899345e-07 TCGA-A2-A1FW-01A-11D-A13L-09 66 63 3 40 4.545455e-02 1 exome+100bp flanks 34834024 21 40 6.028589e-07 1.148303e-06 TCGA-A2-A1FX-01A-11D-A13L-09 20 19 1 16 5.000000e-02 1 exome+100bp flanks 34834024 3 16 8.612269e-08 4.593210e-07 TCGA-A2-A1FZ-01A-51D-A17G-09 31 29 2 23 6.451613e-02 1 exome+100bp flanks 34834024 5 20 1.435378e-07 5.741513e-07 TCGA-A2-A1G0-01A-11D-A13L-09 21 20 1 18 4.761905e-02 1 exome+100bp flanks 34834024 2 17 5.741513e-08 4.880286e-07 TCGA-A2-A1G1-01A-21D-A13L-09 30 29 1 20 3.333333e-02 1 exome+100bp flanks 34834024 9 19 2.583681e-07 5.454437e-07 TCGA-A2-A1G4-01A-11D-A13L-09 34 34 0 25 0 1 exome+100bp flanks 34834024 9 24 2.583681e-07 6.889816e-07 TCGA-A2-A1G6-01A-11D-A13L-09 5 4 1 4 2.000000e-01 1 exome+100bp flanks 34834024 0 3 0 8.612269e-08 TCGA-A2-A259-01A-11D-A16D-09 14 13 1 11 7.142857e-02 1 exome+100bp flanks 34834024 2 9 5.741513e-08 2.583681e-07 TCGA-A2-A25A-01A-12D-A16D-09 103 96 7 78 6.796117e-02 1 exome+100bp flanks 34834024 16 76 4.593210e-07 2.181775e-06 TCGA-A2-A25B-01A-11D-A167-09 87 81 6 59 6.896552e-02 1 exome+100bp flanks 34834024 22 53 6.315664e-07 1.521501e-06 TCGA-A2-A25C-01A-11D-A167-09 24 22 2 18 8.333333e-02 1 exome+100bp flanks 34834024 4 18 1.148303e-07 5.167362e-07 TCGA-A2-A25D-01A-12D-A16D-09 55 55 0 40 0 1 exome+100bp flanks 34834024 11 36 3.157832e-07 1.033472e-06 TCGA-A2-A25E-01A-11D-A167-09 55 54 1 46 1.818182e-02 1 exome+100bp flanks 34834024 8 43 2.296605e-07 1.234425e-06 TCGA-A2-A25F-01A-11D-A167-09 3 3 0 0 0 1 exome+100bp flanks 34834024 3 0 8.612269e-08 0 TCGA-A2-A3KC-01A-11D-A20S-09 41 28 13 24 3.170732e-01 1 exome+100bp flanks 34834024 4 17 1.148303e-07 4.880286e-07 TCGA-A2-A3KD-01A-12D-A20S-09 18 10 8 6 4.444444e-01 1 exome+100bp flanks 34834024 3 6 8.612269e-08 1.722454e-07 TCGA-A2-A3XS-01A-11D-A22X-09 34 24 10 19 2.941176e-01 1 exome+100bp flanks 34834024 4 19 1.148303e-07 5.454437e-07 TCGA-A2-A3XT-01A-11D-A22X-09 103 79 24 64 2.330097e-01 1 exome+100bp flanks 34834024 14 58 4.019059e-07 1.665039e-06 TCGA-A2-A3XU-01A-12D-A22X-09 31 22 9 17 2.903226e-01 1 exome+100bp flanks 34834024 4 14 1.148303e-07 4.019059e-07 TCGA-A2-A3XV-01A-21D-A23C-09 56 44 12 38 2.142857e-01 1 exome+100bp flanks 34834024 6 37 1.722454e-07 1.062180e-06 TCGA-A2-A3XW-01A-11D-A23C-09 12 6 6 3 5.000000e-01 1 exome+100bp flanks 34834024 3 2 8.612269e-08 5.741513e-08 TCGA-A2-A3XX-01A-21D-A23C-09 40 35 5 30 1.250000e-01 1 exome+100bp flanks 34834024 3 24 8.612269e-08 6.889816e-07 TCGA-A2-A3XY-01A-11D-A23C-09 60 47 13 36 2.166667e-01 1 exome+100bp flanks 34834024 11 32 3.157832e-07 9.186421e-07 TCGA-A2-A3XZ-01A-42D-A23C-09 52 42 10 33 1.923077e-01 1 exome+100bp flanks 34834024 9 32 2.583681e-07 9.186421e-07 TCGA-A2-A3Y0-01A-11D-A23C-09 197 169 28 132 1.421320e-01 1 exome+100bp flanks 34834024 36 121 1.033472e-06 3.473615e-06 TCGA-A2-A4RW-01A-21D-A25Q-09 124 107 17 86 1.370968e-01 1 exome+100bp flanks 34834024 19 81 5.454437e-07 2.325313e-06 TCGA-A2-A4RX-01A-11D-A25Q-09 22 17 5 11 2.272727e-01 1 exome+100bp flanks 34834024 6 10 1.722454e-07 2.870756e-07 TCGA-A2-A4RY-01A-31D-A25Q-09 32 12 20 9 6.250000e-01 1 exome+100bp flanks 34834024 2 9 5.741513e-08 2.583681e-07 TCGA-A2-A4S0-01A-21D-A25Q-09 17 10 7 6 4.117647e-01 1 exome+100bp flanks 34834024 4 6 1.148303e-07 1.722454e-07 TCGA-A2-A4S1-01A-21D-A25Q-09 80 65 15 59 1.875000e-01 1 exome+100bp flanks 34834024 6 51 1.722454e-07 1.464086e-06 TCGA-A2-A4S2-01A-12D-A25Q-09 45 39 6 30 1.333333e-01 1 exome+100bp flanks 34834024 8 29 2.296605e-07 8.325194e-07 TCGA-A2-A4S3-01A-21D-A25Q-09 89 72 17 50 1.910112e-01 1 exome+100bp flanks 34834024 19 45 5.454437e-07 1.291840e-06 TCGA-A7-A0CD-01A-11W-A019-09 33 31 2 23 6.060606e-02 1 exome+100bp flanks 34834024 7 22 2.009530e-07 6.315664e-07 TCGA-A7-A0CE-01A-11W-A019-09 114 106 8 86 7.017544e-02 1 exome+100bp flanks 34834024 20 86 5.741513e-07 2.468851e-06 TCGA-A7-A0CG-01A-11W-A019-09 33 30 3 26 9.090909e-02 1 exome+100bp flanks 34834024 4 25 1.148303e-07 7.176891e-07 TCGA-A7-A0CH-01A-21W-A019-09 30 28 2 25 6.666667e-02 1 exome+100bp flanks 34834024 3 23 8.612269e-08 6.602740e-07 TCGA-A7-A0CJ-01A-21W-A019-09 50 44 6 35 1.200000e-01 1 exome+100bp flanks 34834024 9 32 2.583681e-07 9.186421e-07 TCGA-A7-A0D9-01A-31W-A071-09 24 24 0 20 0 1 exome+100bp flanks 34834024 4 19 1.148303e-07 5.454437e-07 TCGA-A7-A0DA-01A-31D-A10Y-09 131 120 11 103 8.396947e-02 1 exome+100bp flanks 34834024 17 94 4.880286e-07 2.698511e-06 TCGA-A7-A0DB-01A-11D-A272-09 42 37 5 26 1.190476e-01 1 exome+100bp flanks 34834024 9 23 2.583681e-07 6.602740e-07 TCGA-A7-A0DB-01A-11W-A019-09 50 49 1 39 2.000000e-02 1 exome+100bp flanks 34834024 8 37 2.296605e-07 1.062180e-06 TCGA-A7-A0DC-01B-04D-A22N-09 1 1 0 1 0 1 exome+100bp flanks 34834024 0 1 0 2.870756e-08 TCGA-A7-A13D-01A-13D-A12Q-09 103 94 9 75 8.737864e-02 1 exome+100bp flanks 34834024 16 70 4.593210e-07 2.009530e-06 TCGA-A7-A13D-01A-13D-A272-09 114 92 22 72 1.929825e-01 1 exome+100bp flanks 34834024 17 66 4.880286e-07 1.894699e-06 TCGA-A7-A13E-01A-11D-A12Q-09 137 129 8 94 5.839416e-02 1 exome+100bp flanks 34834024 31 87 8.899345e-07 2.497558e-06 TCGA-A7-A13E-01A-11D-A272-09 72 61 11 45 1.527778e-01 1 exome+100bp flanks 34834024 15 42 4.306135e-07 1.205718e-06 TCGA-A7-A13F-01A-11D-A12Q-09 34 33 1 29 2.941176e-02 1 exome+100bp flanks 34834024 4 25 1.148303e-07 7.176891e-07 TCGA-A7-A13G-01A-11D-A13L-09 26 25 1 16 3.846154e-02 1 exome+100bp flanks 34834024 8 15 2.296605e-07 4.306135e-07 TCGA-A7-A13H-01A-11D-A228-09 26 22 4 19 1.538462e-01 1 exome+100bp flanks 34834024 2 18 5.741513e-08 5.167362e-07 TCGA-A7-A26E-01A-11D-A167-09 40 38 2 28 5.000000e-02 1 exome+100bp flanks 34834024 9 27 2.583681e-07 7.751042e-07 TCGA-A7-A26E-01A-11D-A272-09 50 42 8 33 1.600000e-01 1 exome+100bp flanks 34834024 8 32 2.296605e-07 9.186421e-07 TCGA-A7-A26E-01B-06D-A272-09 284 252 32 206 1.126761e-01 1 exome+100bp flanks 34834024 42 196 1.205718e-06 5.626683e-06 TCGA-A7-A26F-01A-21D-A167-09 34 32 2 24 5.882353e-02 1 exome+100bp flanks 34834024 8 24 2.296605e-07 6.889816e-07 TCGA-A7-A26F-01B-04D-A22N-09 66 60 6 53 9.090909e-02 1 exome+100bp flanks 34834024 7 48 2.009530e-07 1.377963e-06 TCGA-A7-A26G-01A-21D-A167-09 53 47 6 32 1.132075e-01 1 exome+100bp flanks 34834024 15 31 4.306135e-07 8.899345e-07 TCGA-A7-A26H-01A-11D-A167-09 100 97 3 72 3.000000e-02 1 exome+100bp flanks 34834024 23 69 6.602740e-07 1.980822e-06 TCGA-A7-A26I-01A-11D-A167-09 34 30 4 26 1.176471e-01 1 exome+100bp flanks 34834024 4 23 1.148303e-07 6.602740e-07 TCGA-A7-A26I-01B-06D-A22N-09 1 1 0 1 0 1 exome+100bp flanks 34834024 0 1 0 2.870756e-08 TCGA-A7-A26J-01A-11D-A167-09 21 21 0 16 0 1 exome+100bp flanks 34834024 5 15 1.435378e-07 4.306135e-07 TCGA-A7-A26J-01A-11D-A272-09 29 24 5 18 1.724138e-01 1 exome+100bp flanks 34834024 6 17 1.722454e-07 4.880286e-07 TCGA-A7-A26J-01B-02D-A272-09 163 140 23 119 1.411043e-01 1 exome+100bp flanks 34834024 20 112 5.741513e-07 3.215247e-06 TCGA-A7-A2KD-01A-31D-A21Q-09 49 36 13 28 2.653061e-01 1 exome+100bp flanks 34834024 8 26 2.296605e-07 7.463967e-07 TCGA-A7-A3IY-01A-21D-A21Q-09 25 15 10 10 4.000000e-01 1 exome+100bp flanks 34834024 5 9 1.435378e-07 2.583681e-07 TCGA-A7-A3IZ-01A-11D-A20S-09 126 87 39 58 3.095238e-01 2 all capture (no interval list) 65505363 23 50 3.511163e-07 7.632963e-07 TCGA-A7-A3J0-01A-11D-A20S-09 87 40 47 25 5.402299e-01 1 exome+100bp flanks 34834024 13 12 3.731983e-07 3.444908e-07 TCGA-A7-A3J1-01A-11D-A20S-09 33 23 10 17 3.030303e-01 1 exome+100bp flanks 34834024 5 16 1.435378e-07 4.593210e-07 TCGA-A7-A3RF-01A-11D-A228-09 71 60 11 44 1.549296e-01 1 exome+100bp flanks 34834024 15 39 4.306135e-07 1.119595e-06 TCGA-A7-A425-01A-11D-A243-09 46 37 9 32 1.956522e-01 1 exome+100bp flanks 34834024 3 27 8.612269e-08 7.751042e-07 TCGA-A7-A426-01A-22D-A243-09 46 35 11 27 2.391304e-01 1 exome+100bp flanks 34834024 7 26 2.009530e-07 7.463967e-07 TCGA-A7-A4SA-01A-11D-A25Q-09 93 68 25 47 2.688172e-01 1 exome+100bp flanks 34834024 20 42 5.741513e-07 1.205718e-06 TCGA-A7-A4SB-01A-21D-A25Q-09 42 34 8 30 1.904762e-01 1 exome+100bp flanks 34834024 4 26 1.148303e-07 7.463967e-07 TCGA-A7-A4SC-01A-12D-A25Q-09 46 39 7 31 1.521739e-01 1 exome+100bp flanks 34834024 7 26 2.009530e-07 7.463967e-07 TCGA-A7-A4SD-01A-11D-A25Q-09 60 48 12 38 2.000000e-01 1 exome+100bp flanks 34834024 9 31 2.583681e-07 8.899345e-07 TCGA-A7-A4SE-01A-11D-A25Q-09 113 93 20 77 1.769912e-01 1 exome+100bp flanks 34834024 14 67 4.019059e-07 1.923407e-06 TCGA-A7-A4SF-01A-11D-A25Q-09 87 71 16 50 1.839080e-01 1 exome+100bp flanks 34834024 20 49 5.741513e-07 1.406671e-06 TCGA-A7-A56D-01A-11D-A27P-09 150 131 19 90 1.266667e-01 1 exome+100bp flanks 34834024 34 81 9.760572e-07 2.325313e-06 TCGA-A7-A5ZV-01A-11D-A28B-09 215 178 37 138 1.720930e-01 1 exome+100bp flanks 34834024 40 128 1.148303e-06 3.674568e-06 TCGA-A7-A5ZW-01A-12D-A29N-09 30 26 4 19 1.333333e-01 1 exome+100bp flanks 34834024 6 14 1.722454e-07 4.019059e-07 TCGA-A7-A5ZX-01A-12D-A29N-09 31 26 5 24 1.612903e-01 1 exome+100bp flanks 34834024 2 23 5.741513e-08 6.602740e-07 TCGA-A8-A06N-01A-11W-A019-09 32 32 0 24 0 1 exome+100bp flanks 34834024 7 23 2.009530e-07 6.602740e-07 TCGA-A8-A06O-01A-11W-A019-09 63 60 3 53 4.761905e-02 1 exome+100bp flanks 34834024 7 50 2.009530e-07 1.435378e-06 TCGA-A8-A06P-01A-11W-A019-09 42 40 2 36 4.761905e-02 1 exome+100bp flanks 34834024 4 32 1.148303e-07 9.186421e-07 TCGA-A8-A06Q-01A-11W-A050-09 214 209 5 168 2.336449e-02 0 coding only 34834024 39 148 1.119595e-06 4.248720e-06 TCGA-A8-A06R-01A-11D-A015-09 56 54 2 42 3.571429e-02 1 exome+100bp flanks 34834024 12 41 3.444908e-07 1.177010e-06 TCGA-A8-A06T-01A-11W-A019-09 27 26 1 23 3.703704e-02 1 exome+100bp flanks 34834024 3 21 8.612269e-08 6.028589e-07 TCGA-A8-A06U-01A-11W-A019-09 56 53 3 42 5.357143e-02 1 exome+100bp flanks 34834024 11 38 3.157832e-07 1.090887e-06 TCGA-A8-A06X-01A-21W-A019-09 191 186 5 141 2.617801e-02 0 coding only 34834024 43 133 1.234425e-06 3.818106e-06 TCGA-A8-A06Y-01A-21W-A019-09 33 30 3 24 9.090909e-02 1 exome+100bp flanks 34834024 6 22 1.722454e-07 6.315664e-07 TCGA-A8-A06Z-01A-11W-A019-09 60 56 4 43 6.666667e-02 1 exome+100bp flanks 34834024 13 43 3.731983e-07 1.234425e-06 TCGA-A8-A075-01A-11D-A099-09 74 70 4 54 5.405405e-02 1 exome+100bp flanks 34834024 15 52 4.306135e-07 1.492793e-06 TCGA-A8-A076-01A-21W-A019-09 55 51 4 44 7.272727e-02 1 exome+100bp flanks 34834024 6 39 1.722454e-07 1.119595e-06 TCGA-A8-A079-01A-21W-A019-09 50 48 2 36 4.000000e-02 1 exome+100bp flanks 34834024 10 32 2.870756e-07 9.186421e-07 TCGA-A8-A07B-01A-11W-A019-09 66 62 4 47 6.060606e-02 1 exome+100bp flanks 34834024 14 43 4.019059e-07 1.234425e-06 TCGA-A8-A07C-01A-11D-A045-09 137 134 3 109 2.189781e-02 0 coding only 34834024 24 101 6.889816e-07 2.899464e-06 TCGA-A8-A07E-01A-11W-A050-09 74 73 1 65 1.351351e-02 1 exome+100bp flanks 34834024 5 62 1.435378e-07 1.779869e-06 TCGA-A8-A07F-01A-11W-A019-09 30 29 1 23 3.333333e-02 1 exome+100bp flanks 34834024 6 20 1.722454e-07 5.741513e-07 TCGA-A8-A07G-01A-11W-A050-09 48 47 1 38 2.083333e-02 1 exome+100bp flanks 34834024 9 36 2.583681e-07 1.033472e-06 TCGA-A8-A07I-01A-11W-A019-09 40 38 2 29 5.000000e-02 1 exome+100bp flanks 34834024 8 29 2.296605e-07 8.325194e-07 TCGA-A8-A07J-01A-11W-A019-09 42 39 3 28 7.142857e-02 1 exome+100bp flanks 34834024 10 28 2.870756e-07 8.038118e-07 TCGA-A8-A07L-01A-11W-A019-09 94 90 4 72 4.255319e-02 1 exome+100bp flanks 34834024 17 68 4.880286e-07 1.952114e-06 TCGA-A8-A07O-01A-11W-A019-09 41 41 0 32 0 1 exome+100bp flanks 34834024 9 31 2.583681e-07 8.899345e-07 TCGA-A8-A07P-01A-11W-A019-09 52 50 2 38 3.846154e-02 1 exome+100bp flanks 34834024 11 32 3.157832e-07 9.186421e-07 TCGA-A8-A07R-01A-21W-A050-09 458 411 47 343 1.026201e-01 1 exome+100bp flanks 34834024 62 320 1.779869e-06 9.186421e-06 TCGA-A8-A07U-01A-11W-A050-09 38 37 1 28 2.631579e-02 1 exome+100bp flanks 34834024 9 28 2.583681e-07 8.038118e-07 TCGA-A8-A07W-01A-11W-A019-09 80 78 2 59 2.500000e-02 1 exome+100bp flanks 34834024 19 54 5.454437e-07 1.550208e-06 TCGA-A8-A07Z-01A-11W-A019-09 23 22 1 17 4.347826e-02 1 exome+100bp flanks 34834024 5 16 1.435378e-07 4.593210e-07 TCGA-A8-A081-01A-11W-A019-09 82 79 3 65 3.658537e-02 1 exome+100bp flanks 34834024 14 59 4.019059e-07 1.693746e-06 TCGA-A8-A082-01A-11W-A019-09 21 21 0 16 0 1 exome+100bp flanks 34834024 5 16 1.435378e-07 4.593210e-07 TCGA-A8-A083-01A-21W-A019-09 29 27 2 27 6.896552e-02 1 exome+100bp flanks 34834024 0 27 0 7.751042e-07 TCGA-A8-A084-01A-21W-A019-09 65 63 2 55 3.076923e-02 1 exome+100bp flanks 34834024 8 52 2.296605e-07 1.492793e-06 TCGA-A8-A085-01A-11W-A019-09 68 66 2 51 2.941176e-02 1 exome+100bp flanks 34834024 15 50 4.306135e-07 1.435378e-06 TCGA-A8-A086-01A-11W-A019-09 23 21 2 15 8.695652e-02 1 exome+100bp flanks 34834024 6 15 1.722454e-07 4.306135e-07 TCGA-A8-A08A-01A-11W-A019-09 31 31 0 25 0 1 exome+100bp flanks 34834024 6 23 1.722454e-07 6.602740e-07 TCGA-A8-A08B-01A-11W-A019-09 33 31 2 18 6.060606e-02 1 exome+100bp flanks 34834024 12 18 3.444908e-07 5.167362e-07 TCGA-A8-A08C-01A-11W-A019-09 2 1 1 1 5.000000e-01 1 exome+100bp flanks 34834024 0 1 0 2.870756e-08 TCGA-A8-A08F-01A-11W-A019-09 116 109 7 86 6.034483e-02 1 exome+100bp flanks 34834024 21 83 6.028589e-07 2.382728e-06 TCGA-A8-A08G-01A-11W-A019-09 34 33 1 26 2.941176e-02 1 exome+100bp flanks 34834024 7 24 2.009530e-07 6.889816e-07 TCGA-A8-A08H-01A-21W-A019-09 54 49 5 42 9.259259e-02 1 exome+100bp flanks 34834024 7 41 2.009530e-07 1.177010e-06 TCGA-A8-A08I-01A-11W-A019-09 40 37 3 29 7.500000e-02 1 exome+100bp flanks 34834024 8 25 2.296605e-07 7.176891e-07 TCGA-A8-A08J-01A-11W-A019-09 28 28 0 25 0 1 exome+100bp flanks 34834024 2 23 5.741513e-08 6.602740e-07 TCGA-A8-A08L-01A-11W-A019-09 203 200 3 157 1.477833e-02 0 coding only 34834024 42 147 1.205718e-06 4.220012e-06 TCGA-A8-A08O-01A-21W-A071-09 25 24 1 19 4.000000e-02 1 exome+100bp flanks 34834024 5 19 1.435378e-07 5.454437e-07 TCGA-A8-A08P-01A-11W-A019-09 38 38 0 32 0 1 exome+100bp flanks 34834024 6 28 1.722454e-07 8.038118e-07 TCGA-A8-A08R-01A-11W-A050-09 171 165 6 124 3.508772e-02 1 exome+100bp flanks 34834024 39 113 1.119595e-06 3.243955e-06 TCGA-A8-A08S-01A-11W-A050-09 52 50 2 39 3.846154e-02 1 exome+100bp flanks 34834024 11 36 3.157832e-07 1.033472e-06 TCGA-A8-A08T-01A-21W-A019-09 49 48 1 39 2.040816e-02 1 exome+100bp flanks 34834024 9 34 2.583681e-07 9.760572e-07 TCGA-A8-A08X-01A-21W-A019-09 17 17 0 13 0 1 exome+100bp flanks 34834024 4 11 1.148303e-07 3.157832e-07 TCGA-A8-A08Z-01A-21W-A019-09 30 30 0 22 0 1 exome+100bp flanks 34834024 6 22 1.722454e-07 6.315664e-07 TCGA-A8-A090-01A-11W-A019-09 35 35 0 26 0 1 exome+100bp flanks 34834024 9 24 2.583681e-07 6.889816e-07 TCGA-A8-A091-01A-11W-A019-09 25 24 1 17 4.000000e-02 1 exome+100bp flanks 34834024 7 17 2.009530e-07 4.880286e-07 TCGA-A8-A092-01A-11W-A019-09 85 77 8 63 9.411765e-02 1 exome+100bp flanks 34834024 14 63 4.019059e-07 1.808577e-06 TCGA-A8-A093-01A-11W-A019-09 101 98 3 74 2.970297e-02 0 coding only 34834024 23 68 6.602740e-07 1.952114e-06 TCGA-A8-A094-01A-11W-A019-09 176 172 4 137 2.272727e-02 0 coding only 34834024 31 128 8.899345e-07 3.674568e-06 TCGA-A8-A095-01A-11W-A019-09 125 117 8 88 6.400000e-02 1 exome+100bp flanks 34834024 28 83 8.038118e-07 2.382728e-06 TCGA-A8-A096-01A-11W-A019-09 28 27 1 25 3.571429e-02 1 exome+100bp flanks 34834024 2 22 5.741513e-08 6.315664e-07 TCGA-A8-A097-01A-11W-A050-09 102 98 4 72 3.921569e-02 1 exome+100bp flanks 34834024 25 64 7.176891e-07 1.837284e-06 TCGA-A8-A099-01A-11W-A019-09 22 21 1 18 4.545455e-02 1 exome+100bp flanks 34834024 2 16 5.741513e-08 4.593210e-07 TCGA-A8-A09A-01A-11W-A019-09 105 98 7 78 6.666667e-02 1 exome+100bp flanks 34834024 19 77 5.454437e-07 2.210482e-06 TCGA-A8-A09B-01A-11W-A019-09 40 35 5 28 1.250000e-01 1 exome+100bp flanks 34834024 6 25 1.722454e-07 7.176891e-07 TCGA-A8-A09C-01A-11W-A019-09 30 28 2 18 6.666667e-02 1 exome+100bp flanks 34834024 10 18 2.870756e-07 5.167362e-07 TCGA-A8-A09D-01A-11W-A019-09 47 40 7 27 1.489362e-01 1 exome+100bp flanks 34834024 13 25 3.731983e-07 7.176891e-07 TCGA-A8-A09E-01A-11W-A019-09 45 43 2 39 4.444444e-02 1 exome+100bp flanks 34834024 4 38 1.148303e-07 1.090887e-06 TCGA-A8-A09G-01A-21W-A019-09 243 235 8 188 3.292181e-02 1 exome+100bp flanks 34834024 45 175 1.291840e-06 5.023824e-06 TCGA-A8-A09I-01A-22W-A050-09 127 123 4 95 3.149606e-02 1 exome+100bp flanks 34834024 25 91 7.176891e-07 2.612388e-06 TCGA-A8-A09K-01A-11W-A019-09 35 34 1 27 2.857143e-02 1 exome+100bp flanks 34834024 7 27 2.009530e-07 7.751042e-07 TCGA-A8-A09M-01A-11W-A019-09 92 89 3 66 3.260870e-02 1 exome+100bp flanks 34834024 22 57 6.315664e-07 1.636331e-06 TCGA-A8-A09N-01A-11W-A019-09 77 71 6 46 7.792208e-02 1 exome+100bp flanks 34834024 23 43 6.602740e-07 1.234425e-06 TCGA-A8-A09Q-01A-11W-A019-09 98 95 3 74 3.061224e-02 1 exome+100bp flanks 34834024 20 71 5.741513e-07 2.038237e-06 TCGA-A8-A09R-01A-11W-A019-09 50 48 2 41 4.000000e-02 1 exome+100bp flanks 34834024 7 40 2.009530e-07 1.148303e-06 TCGA-A8-A09T-01A-11W-A019-09 24 22 2 20 8.333333e-02 1 exome+100bp flanks 34834024 1 20 2.870756e-08 5.741513e-07 TCGA-A8-A09V-01A-11D-A045-09 24 23 1 20 4.166667e-02 1 exome+100bp flanks 34834024 3 19 8.612269e-08 5.454437e-07 TCGA-A8-A09W-01A-11W-A019-09 81 76 5 61 6.172840e-02 1 exome+100bp flanks 34834024 15 61 4.306135e-07 1.751161e-06 TCGA-A8-A09X-01A-11W-A019-09 56 55 1 44 1.785714e-02 1 exome+100bp flanks 34834024 11 41 3.157832e-07 1.177010e-06 TCGA-A8-A09Z-01A-11W-A019-09 1403 1238 165 969 1.176051e-01 1 exome+100bp flanks 34834024 263 914 7.550090e-06 2.623871e-05 TCGA-A8-A0A1-01A-11W-A019-09 37 35 2 30 5.405405e-02 1 exome+100bp flanks 34834024 5 28 1.435378e-07 8.038118e-07 TCGA-A8-A0A2-01A-11W-A050-09 34 32 2 22 5.882353e-02 1 exome+100bp flanks 34834024 10 20 2.870756e-07 5.741513e-07 TCGA-A8-A0A4-01A-11W-A019-09 35 31 4 24 1.142857e-01 1 exome+100bp flanks 34834024 7 24 2.009530e-07 6.889816e-07 TCGA-A8-A0A6-01A-12W-A071-09 3173 2946 227 2051 7.154113e-02 1 exome+100bp flanks 34834024 838 1935 2.405694e-05 5.554914e-05 TCGA-A8-A0A7-01A-11W-A019-09 90 87 3 69 3.333333e-02 1 exome+100bp flanks 34834024 17 66 4.880286e-07 1.894699e-06 TCGA-A8-A0A9-01A-11W-A019-09 47 43 4 37 8.510638e-02 1 exome+100bp flanks 34834024 6 35 1.722454e-07 1.004765e-06 TCGA-A8-A0AB-01A-11W-A050-09 24 22 2 18 8.333333e-02 1 exome+100bp flanks 34834024 4 18 1.148303e-07 5.167362e-07 TCGA-A8-A0AD-01A-11W-A071-09 28 27 1 18 3.571429e-02 1 exome+100bp flanks 34834024 9 18 2.583681e-07 5.167362e-07 TCGA-AC-A23C-01A-12D-A167-09 97 95 2 77 2.061856e-02 1 exome+100bp flanks 34834024 18 73 5.167362e-07 2.095652e-06 TCGA-AC-A23E-01A-11D-A159-09 18 18 0 15 0 1 exome+100bp flanks 34834024 2 13 5.741513e-08 3.731983e-07 TCGA-AC-A23G-01A-11D-A20S-09 30 27 3 19 1.000000e-01 1 exome+100bp flanks 34834024 6 17 1.722454e-07 4.880286e-07 TCGA-AC-A23H-01A-11D-A159-09 4713 4533 180 3459 3.819223e-02 1 exome+100bp flanks 34834024 1004 3194 2.882240e-05 9.169196e-05 TCGA-AC-A2B8-01A-11D-A17D-09 103 96 7 72 6.796117e-02 1 exome+100bp flanks 34834024 21 67 6.028589e-07 1.923407e-06 TCGA-AC-A2BK-01A-11D-A21Q-09 96 77 19 59 1.979167e-01 1 exome+100bp flanks 34834024 17 54 4.880286e-07 1.550208e-06 TCGA-AC-A2BM-01A-11D-A21Q-09 25 20 5 16 2.000000e-01 1 exome+100bp flanks 34834024 4 14 1.148303e-07 4.019059e-07 TCGA-AC-A2FB-01A-11D-A17D-09 17 15 2 12 1.176471e-01 1 exome+100bp flanks 34834024 3 11 8.612269e-08 3.157832e-07 TCGA-AC-A2FE-01A-11D-A19Y-09 34 18 16 15 4.705882e-01 1 exome+100bp flanks 34834024 3 12 8.612269e-08 3.444908e-07 TCGA-AC-A2FF-01A-11D-A17D-09 13 12 1 12 7.692308e-02 1 exome+100bp flanks 34834024 0 12 0 3.444908e-07 TCGA-AC-A2FG-01A-11D-A17D-09 53 47 6 34 1.132075e-01 1 exome+100bp flanks 34834024 12 31 3.444908e-07 8.899345e-07 TCGA-AC-A2FK-01A-12D-A17W-09 1 0 1 0 1 1 exome+100bp flanks 34834024 0 0 0 0 TCGA-AC-A2FM-01A-11D-A19Y-09 60 46 14 33 2.333333e-01 1 exome+100bp flanks 34834024 9 27 2.583681e-07 7.751042e-07 TCGA-AC-A2FO-01A-11D-A17W-09 25 24 1 21 4.000000e-02 1 exome+100bp flanks 34834024 3 20 8.612269e-08 5.741513e-07 TCGA-AC-A2QH-01A-11D-A18P-09 27 27 0 21 0 1 exome+100bp flanks 34834024 6 20 1.722454e-07 5.741513e-07 TCGA-AC-A2QH-01B-04D-A22N-09 60 54 6 48 1.000000e-01 1 exome+100bp flanks 34834024 6 42 1.722454e-07 1.205718e-06 TCGA-AC-A2QI-01A-12D-A19Y-09 91 72 19 54 2.087912e-01 1 exome+100bp flanks 34834024 18 50 5.167362e-07 1.435378e-06 TCGA-AC-A2QJ-01A-12D-A19Y-09 97 38 59 35 6.082474e-01 1 exome+100bp flanks 34834024 1 21 2.870756e-08 6.028589e-07 TCGA-AC-A3BB-01A-21D-A19Y-09 138 78 60 56 4.347826e-01 2 all capture (no interval list) 65505363 16 49 2.442548e-07 7.480304e-07 TCGA-AC-A3EH-01A-22D-A228-09 66 43 23 32 3.484848e-01 1 exome+100bp flanks 34834024 10 29 2.870756e-07 8.325194e-07 TCGA-AC-A3HN-01A-11D-A20S-09 20 17 3 12 1.500000e-01 1 exome+100bp flanks 34834024 5 10 1.435378e-07 2.870756e-07 TCGA-AC-A3OD-01A-11D-A21Q-09 23 21 2 19 8.695652e-02 1 exome+100bp flanks 34834024 2 18 5.741513e-08 5.167362e-07 TCGA-AC-A3OD-01B-06D-A22N-09 126 108 18 88 1.428571e-01 1 exome+100bp flanks 34834024 19 72 5.454437e-07 2.066945e-06 TCGA-AC-A3QP-01A-11D-A22X-09 34 29 5 23 1.470588e-01 1 exome+100bp flanks 34834024 6 21 1.722454e-07 6.028589e-07 TCGA-AC-A3TM-01A-11D-A228-09 105 41 64 35 6.095238e-01 2 all capture (no interval list) 65505363 6 29 9.159555e-08 4.427118e-07 TCGA-AC-A3TN-01A-11D-A228-09 222 82 140 61 6.306306e-01 2 all capture (no interval list) 65505363 15 34 2.289889e-07 5.190415e-07 TCGA-AC-A3W5-01A-11D-A228-09 158 125 33 100 2.088608e-01 1 exome+100bp flanks 34834024 24 88 6.889816e-07 2.526266e-06 TCGA-AC-A3W6-01A-12D-A228-09 270 182 88 140 3.259259e-01 2 all capture (no interval list) 65505363 40 125 6.106370e-07 1.908241e-06 TCGA-AC-A3W7-01A-11D-A228-09 89 71 18 50 2.022472e-01 1 exome+100bp flanks 34834024 18 46 5.167362e-07 1.320548e-06 TCGA-AC-A3YI-01A-21D-A23C-09 20 14 6 12 3.000000e-01 1 exome+100bp flanks 34834024 2 12 5.741513e-08 3.444908e-07 TCGA-AC-A3YJ-01A-11D-A22X-09 35 28 7 19 2.000000e-01 1 exome+100bp flanks 34834024 8 18 2.296605e-07 5.167362e-07 TCGA-AC-A5EH-01A-11D-A28B-09 159 132 27 97 1.698113e-01 1 exome+100bp flanks 34834024 31 87 8.899345e-07 2.497558e-06 TCGA-AC-A5EI-01A-11D-A27P-09 36 31 5 25 1.388889e-01 1 exome+100bp flanks 34834024 4 22 1.148303e-07 6.315664e-07 TCGA-AC-A5XS-01A-11D-A29N-09 557 482 75 358 1.346499e-01 1 exome+100bp flanks 34834024 112 331 3.215247e-06 9.502204e-06 TCGA-AC-A5XU-01A-11D-A28B-09 73 58 15 40 2.054795e-01 1 exome+100bp flanks 34834024 17 35 4.880286e-07 1.004765e-06 TCGA-AC-A62X-01A-11D-A29N-09 68 55 13 45 1.911765e-01 1 exome+100bp flanks 34834024 9 38 2.583681e-07 1.090887e-06 TCGA-AC-A62Y-01A-11D-A29N-09 72 64 8 51 1.111111e-01 1 exome+100bp flanks 34834024 12 45 3.444908e-07 1.291840e-06 TCGA-AN-A03X-01A-21W-A019-09 42 40 2 34 4.761905e-02 1 exome+100bp flanks 34834024 6 34 1.722454e-07 9.760572e-07 TCGA-AN-A03Y-01A-21W-A019-09 29 28 1 21 3.448276e-02 1 exome+100bp flanks 34834024 6 20 1.722454e-07 5.741513e-07 TCGA-AN-A041-01A-11W-A050-09 24 23 1 18 4.166667e-02 1 exome+100bp flanks 34834024 5 18 1.435378e-07 5.167362e-07 TCGA-AN-A046-01A-21W-A050-09 5700 5314 386 4352 6.771930e-02 1 exome+100bp flanks 34834024 894 4017 2.566456e-05 1.153183e-04 TCGA-AN-A049-01A-21W-A019-09 35 34 1 28 2.857143e-02 1 exome+100bp flanks 34834024 6 28 1.722454e-07 8.038118e-07 TCGA-AN-A04A-01A-21W-A050-09 30 27 3 19 1.000000e-01 1 exome+100bp flanks 34834024 6 17 1.722454e-07 4.880286e-07 TCGA-AN-A04C-01A-21W-A050-09 66 63 3 49 4.545455e-02 1 exome+100bp flanks 34834024 14 47 4.019059e-07 1.349256e-06 TCGA-AN-A04D-01A-21W-A050-09 94 90 4 66 4.255319e-02 1 exome+100bp flanks 34834024 23 61 6.602740e-07 1.751161e-06 TCGA-AN-A0AJ-01A-11W-A019-09 78 74 4 55 5.128205e-02 1 exome+100bp flanks 34834024 18 51 5.167362e-07 1.464086e-06 TCGA-AN-A0AK-01A-21W-A019-09 1263 1132 131 876 1.037213e-01 1 exome+100bp flanks 34834024 240 816 6.889816e-06 2.342537e-05 TCGA-AN-A0AL-01A-11W-A019-09 78 72 6 61 7.692308e-02 1 exome+100bp flanks 34834024 10 55 2.870756e-07 1.578916e-06 TCGA-AN-A0AM-01A-11W-A050-09 49 49 0 38 0 1 exome+100bp flanks 34834024 10 36 2.870756e-07 1.033472e-06 TCGA-AN-A0AR-01A-11W-A019-09 115 106 9 86 7.826087e-02 1 exome+100bp flanks 34834024 20 83 5.741513e-07 2.382728e-06 TCGA-AN-A0AS-01A-11W-A019-09 38 38 0 35 0 1 exome+100bp flanks 34834024 3 35 8.612269e-08 1.004765e-06 TCGA-AN-A0AT-01A-11D-A045-09 108 106 2 89 1.851852e-02 0 coding only 34834024 17 84 4.880286e-07 2.411435e-06 TCGA-AN-A0FD-01A-11W-A050-09 40 39 1 32 2.500000e-02 1 exome+100bp flanks 34834024 5 32 1.435378e-07 9.186421e-07 TCGA-AN-A0FF-01A-11W-A050-09 27 23 4 20 1.481481e-01 1 exome+100bp flanks 34834024 3 17 8.612269e-08 4.880286e-07 TCGA-AN-A0FJ-01A-11W-A019-09 84 80 4 64 4.761905e-02 1 exome+100bp flanks 34834024 16 62 4.593210e-07 1.779869e-06 TCGA-AN-A0FK-01A-11W-A050-09 45 43 2 27 4.444444e-02 1 exome+100bp flanks 34834024 15 25 4.306135e-07 7.176891e-07 TCGA-AN-A0FL-01A-11W-A050-09 177 172 5 136 2.824859e-02 0 coding only 34834024 33 127 9.473496e-07 3.645861e-06 TCGA-AN-A0FN-01A-11W-A050-09 32 25 7 23 2.187500e-01 1 exome+100bp flanks 34834024 2 19 5.741513e-08 5.454437e-07 TCGA-AN-A0FS-01A-11W-A050-09 64 59 5 46 7.812500e-02 1 exome+100bp flanks 34834024 13 44 3.731983e-07 1.263133e-06 TCGA-AN-A0FT-01A-11W-A050-09 97 93 4 66 4.123711e-02 1 exome+100bp flanks 34834024 26 59 7.463967e-07 1.693746e-06 TCGA-AN-A0FV-01A-11W-A019-09 82 75 7 55 8.536585e-02 1 exome+100bp flanks 34834024 19 50 5.454437e-07 1.435378e-06 TCGA-AN-A0FW-01A-11W-A050-09 97 91 6 71 6.185567e-02 1 exome+100bp flanks 34834024 16 62 4.593210e-07 1.779869e-06 TCGA-AN-A0FX-01A-11W-A050-09 148 136 12 122 8.108108e-02 1 exome+100bp flanks 34834024 13 112 3.731983e-07 3.215247e-06 TCGA-AN-A0FY-01A-11W-A050-09 51 48 3 44 5.882353e-02 1 exome+100bp flanks 34834024 4 40 1.148303e-07 1.148303e-06 TCGA-AN-A0FZ-01A-11W-A050-09 46 44 2 36 4.347826e-02 1 exome+100bp flanks 34834024 8 35 2.296605e-07 1.004765e-06 TCGA-AN-A0G0-01A-11W-A050-09 39 37 2 33 5.128205e-02 1 exome+100bp flanks 34834024 4 29 1.148303e-07 8.325194e-07 TCGA-AN-A0XL-01A-11D-A10M-09 30 26 4 21 1.333333e-01 1 exome+100bp flanks 34834024 5 19 1.435378e-07 5.454437e-07 TCGA-AN-A0XN-01A-21D-A10G-09 120 118 2 92 1.666667e-02 0 coding only 34834024 22 84 6.315664e-07 2.411435e-06 TCGA-AN-A0XO-01A-11D-A10G-09 27 25 2 20 7.407407e-02 1 exome+100bp flanks 34834024 5 19 1.435378e-07 5.454437e-07 TCGA-AN-A0XP-01A-11D-A117-09 27 25 2 20 7.407407e-02 1 exome+100bp flanks 34834024 5 18 1.435378e-07 5.167362e-07 TCGA-AN-A0XR-01A-11D-A10G-09 34 31 3 26 8.823529e-02 1 exome+100bp flanks 34834024 5 24 1.435378e-07 6.889816e-07 TCGA-AN-A0XS-01A-22D-A10G-09 27 27 0 23 0 1 exome+100bp flanks 34834024 3 22 8.612269e-08 6.315664e-07 TCGA-AN-A0XT-01A-11D-A10G-09 18 14 4 7 2.222222e-01 1 exome+100bp flanks 34834024 5 7 1.435378e-07 2.009530e-07 TCGA-AN-A0XU-01A-11D-A10G-09 97 94 3 77 3.092784e-02 1 exome+100bp flanks 34834024 16 69 4.593210e-07 1.980822e-06 TCGA-AN-A0XV-01A-11D-A10G-09 29 27 2 23 6.896552e-02 1 exome+100bp flanks 34834024 3 21 8.612269e-08 6.028589e-07 TCGA-AN-A0XW-01A-11D-A10G-09 224 216 8 166 3.571429e-02 1 exome+100bp flanks 34834024 46 153 1.320548e-06 4.392257e-06 TCGA-AO-A03L-01A-41W-A071-09 25 22 3 20 1.200000e-01 1 exome+100bp flanks 34834024 2 20 5.741513e-08 5.741513e-07 TCGA-AO-A03M-01B-11D-A10M-09 777 722 55 547 7.078507e-02 1 exome+100bp flanks 34834024 164 496 4.708041e-06 1.423895e-05 TCGA-AO-A03N-01B-11D-A10M-09 101 96 5 68 4.950495e-02 1 exome+100bp flanks 34834024 26 64 7.463967e-07 1.837284e-06 TCGA-AO-A03O-01A-11W-A019-09 62 60 2 53 3.225806e-02 1 exome+100bp flanks 34834024 7 51 2.009530e-07 1.464086e-06 TCGA-AO-A03P-01A-11W-A019-09 49 47 2 36 4.081633e-02 1 exome+100bp flanks 34834024 11 33 3.157832e-07 9.473496e-07 TCGA-AO-A03R-01A-21W-A050-09 43 43 0 30 0 1 exome+100bp flanks 34834024 13 27 3.731983e-07 7.751042e-07 TCGA-AO-A03T-01A-21W-A050-09 92 89 3 71 3.260870e-02 1 exome+100bp flanks 34834024 17 67 4.880286e-07 1.923407e-06 TCGA-AO-A03U-01B-21D-A10M-09 8 8 0 6 0 1 exome+100bp flanks 34834024 1 5 2.870756e-08 1.435378e-07 TCGA-AO-A03V-01A-11D-A10Y-09 52 50 2 43 3.846154e-02 1 exome+100bp flanks 34834024 7 42 2.009530e-07 1.205718e-06 TCGA-AO-A0J2-01A-11W-A050-09 68 63 5 42 7.352941e-02 1 exome+100bp flanks 34834024 20 38 5.741513e-07 1.090887e-06 TCGA-AO-A0J3-01A-11W-A050-09 78 76 2 59 2.564103e-02 1 exome+100bp flanks 34834024 16 55 4.593210e-07 1.578916e-06 TCGA-AO-A0J4-01A-11W-A050-09 85 83 2 65 2.352941e-02 1 exome+100bp flanks 34834024 18 58 5.167362e-07 1.665039e-06 TCGA-AO-A0J5-01A-11W-A050-09 54 53 1 42 1.851852e-02 1 exome+100bp flanks 34834024 10 41 2.870756e-07 1.177010e-06 TCGA-AO-A0J6-01A-11W-A050-09 103 101 2 84 1.941748e-02 0 coding only 34834024 14 76 4.019059e-07 2.181775e-06 TCGA-AO-A0J7-01A-11W-A050-09 22 22 0 19 0 1 exome+100bp flanks 34834024 3 17 8.612269e-08 4.880286e-07 TCGA-AO-A0J8-01A-21D-A045-09 26 23 3 16 1.153846e-01 1 exome+100bp flanks 34834024 7 16 2.009530e-07 4.593210e-07 TCGA-AO-A0J9-01A-11W-A050-09 97 91 6 73 6.185567e-02 1 exome+100bp flanks 34834024 15 67 4.306135e-07 1.923407e-06 TCGA-AO-A0JA-01A-11W-A071-09 30 29 1 23 3.333333e-02 1 exome+100bp flanks 34834024 5 21 1.435378e-07 6.028589e-07 TCGA-AO-A0JB-01A-11W-A071-09 85 74 11 62 1.294118e-01 1 exome+100bp flanks 34834024 10 55 2.870756e-07 1.578916e-06 TCGA-AO-A0JC-01A-11W-A071-09 9 9 0 6 0 1 exome+100bp flanks 34834024 2 4 5.741513e-08 1.148303e-07 TCGA-AO-A0JD-01A-11W-A071-09 105 99 6 82 5.714286e-02 1 exome+100bp flanks 34834024 17 78 4.880286e-07 2.239190e-06 TCGA-AO-A0JE-01A-11W-A071-09 40 40 0 32 0 1 exome+100bp flanks 34834024 8 30 2.296605e-07 8.612269e-07 TCGA-AO-A0JF-01A-11W-A071-09 29 27 2 20 6.896552e-02 1 exome+100bp flanks 34834024 7 16 2.009530e-07 4.593210e-07 TCGA-AO-A0JI-01A-21W-A100-09 15 15 0 13 0 1 exome+100bp flanks 34834024 2 11 5.741513e-08 3.157832e-07 TCGA-AO-A0JJ-01A-11W-A071-09 12 12 0 9 0 1 exome+100bp flanks 34834024 3 9 8.612269e-08 2.583681e-07 TCGA-AO-A0JL-01A-11W-A071-09 62 60 2 47 3.225806e-02 1 exome+100bp flanks 34834024 13 46 3.731983e-07 1.320548e-06 TCGA-AO-A0JM-01A-21W-A071-09 34 30 4 23 1.176471e-01 1 exome+100bp flanks 34834024 6 21 1.722454e-07 6.028589e-07 TCGA-AO-A124-01A-11D-A10M-09 138 131 7 110 5.072464e-02 1 exome+100bp flanks 34834024 20 101 5.741513e-07 2.899464e-06 TCGA-AO-A125-01A-11D-A10M-09 41 38 3 30 7.317073e-02 1 exome+100bp flanks 34834024 8 23 2.296605e-07 6.602740e-07 TCGA-AO-A126-01A-11D-A10M-09 21 19 2 15 9.523810e-02 1 exome+100bp flanks 34834024 4 14 1.148303e-07 4.019059e-07 TCGA-AO-A128-01A-11D-A10M-09 981 918 63 674 6.422018e-02 1 exome+100bp flanks 34834024 226 617 6.487910e-06 1.771257e-05 TCGA-AO-A129-01A-21D-A10M-09 87 87 0 66 0 1 exome+100bp flanks 34834024 21 61 6.028589e-07 1.751161e-06 TCGA-AO-A12A-01A-21D-A10Y-09 15 14 1 10 6.666667e-02 1 exome+100bp flanks 34834024 4 7 1.148303e-07 2.009530e-07 TCGA-AO-A12B-01A-11D-A10M-09 17 16 1 14 5.882353e-02 1 exome+100bp flanks 34834024 1 13 2.870756e-08 3.731983e-07 TCGA-AO-A12D-01A-11D-A10Y-09 36 34 2 25 5.555556e-02 1 exome+100bp flanks 34834024 6 21 1.722454e-07 6.028589e-07 TCGA-AO-A12E-01A-11D-A10M-09 620 493 127 318 2.048387e-01 1 exome+100bp flanks 34834024 134 238 3.846814e-06 6.832400e-06 TCGA-AO-A12F-01A-11D-A10Y-09 31 29 2 26 6.451613e-02 1 exome+100bp flanks 34834024 2 25 5.741513e-08 7.176891e-07 TCGA-AO-A12G-01A-11D-A10M-09 36 33 3 27 8.333333e-02 1 exome+100bp flanks 34834024 5 24 1.435378e-07 6.889816e-07 TCGA-AO-A12H-01A-11D-A10Y-09 21 20 1 16 4.761905e-02 1 exome+100bp flanks 34834024 4 12 1.148303e-07 3.444908e-07 TCGA-AO-A1KO-01A-31D-A188-09 32 31 1 24 3.125000e-02 1 exome+100bp flanks 34834024 7 22 2.009530e-07 6.315664e-07 TCGA-AO-A1KP-01A-11D-A13L-09 21 19 2 14 9.523810e-02 1 exome+100bp flanks 34834024 5 14 1.435378e-07 4.019059e-07 TCGA-AO-A1KR-01A-12D-A142-09 69 66 3 47 4.347826e-02 1 exome+100bp flanks 34834024 18 45 5.167362e-07 1.291840e-06 TCGA-AO-A1KS-01A-11D-A13L-09 42 41 1 28 2.380952e-02 1 exome+100bp flanks 34834024 13 28 3.731983e-07 8.038118e-07 TCGA-AO-A1KT-01A-11D-A13L-09 39 38 1 24 2.564103e-02 1 exome+100bp flanks 34834024 11 23 3.157832e-07 6.602740e-07 TCGA-AQ-A04H-01B-11D-A10M-09 69 67 2 51 2.898551e-02 1 exome+100bp flanks 34834024 14 48 4.019059e-07 1.377963e-06 TCGA-AQ-A04J-01A-02W-A050-09 57 56 1 44 1.754386e-02 1 exome+100bp flanks 34834024 12 42 3.444908e-07 1.205718e-06 TCGA-AQ-A04L-01B-21D-A10M-09 51 45 6 33 1.176471e-01 1 exome+100bp flanks 34834024 11 28 3.157832e-07 8.038118e-07 TCGA-AQ-A0Y5-01A-11D-A14K-09 48 47 1 37 2.083333e-02 1 exome+100bp flanks 34834024 10 33 2.870756e-07 9.473496e-07 TCGA-AQ-A1H2-01A-11D-A13L-09 27 26 1 21 3.703704e-02 1 exome+100bp flanks 34834024 5 20 1.435378e-07 5.741513e-07 TCGA-AQ-A1H3-01A-31D-A13L-09 28 28 0 19 0 1 exome+100bp flanks 34834024 9 17 2.583681e-07 4.880286e-07 TCGA-AQ-A54N-01A-11D-A25Q-09 82 70 12 60 1.463415e-01 1 exome+100bp flanks 34834024 10 50 2.870756e-07 1.435378e-06 TCGA-AQ-A54O-01A-11D-A25Q-09 31 28 3 21 9.677419e-02 1 exome+100bp flanks 34834024 7 21 2.009530e-07 6.028589e-07 TCGA-AR-A0TS-01A-11D-A10Y-09 40 39 1 30 2.500000e-02 1 exome+100bp flanks 34834024 9 29 2.583681e-07 8.325194e-07 TCGA-AR-A0TU-01A-31D-A10G-09 78 75 3 56 3.846154e-02 1 exome+100bp flanks 34834024 18 54 5.167362e-07 1.550208e-06 TCGA-AR-A0TX-01A-11D-A099-09 287 276 11 217 3.832753e-02 1 exome+100bp flanks 34834024 54 197 1.550208e-06 5.655390e-06 TCGA-AR-A0TY-01A-12W-A12T-09 89 83 6 74 6.741573e-02 1 exome+100bp flanks 34834024 9 66 2.583681e-07 1.894699e-06 TCGA-AR-A0U0-01A-11D-A10G-09 49 45 4 39 8.163265e-02 1 exome+100bp flanks 34834024 6 34 1.722454e-07 9.760572e-07 TCGA-AR-A0U1-01A-11D-A10Y-09 66 63 3 54 4.545455e-02 1 exome+100bp flanks 34834024 8 51 2.296605e-07 1.464086e-06 TCGA-AR-A0U2-01A-11D-A10G-09 57 54 3 44 5.263158e-02 1 exome+100bp flanks 34834024 9 39 2.583681e-07 1.119595e-06 TCGA-AR-A0U3-01A-11D-A10G-09 35 33 2 26 5.714286e-02 1 exome+100bp flanks 34834024 7 21 2.009530e-07 6.028589e-07 TCGA-AR-A1AH-01A-11D-A12B-09 94 86 8 57 8.510638e-02 1 exome+100bp flanks 34834024 27 52 7.751042e-07 1.492793e-06 TCGA-AR-A1AI-01A-11D-A12Q-09 61 58 3 47 4.918033e-02 1 exome+100bp flanks 34834024 11 45 3.157832e-07 1.291840e-06 TCGA-AR-A1AJ-01A-21D-A12Q-09 25 23 2 21 8.000000e-02 1 exome+100bp flanks 34834024 2 19 5.741513e-08 5.454437e-07 TCGA-AR-A1AK-01A-21D-A12Q-09 64 58 6 46 9.375000e-02 1 exome+100bp flanks 34834024 11 45 3.157832e-07 1.291840e-06 TCGA-AR-A1AL-01A-21D-A12Q-09 25 23 2 19 8.000000e-02 1 exome+100bp flanks 34834024 3 18 8.612269e-08 5.167362e-07 TCGA-AR-A1AM-01A-41D-A228-09 29 24 5 20 1.724138e-01 1 exome+100bp flanks 34834024 4 17 1.148303e-07 4.880286e-07 TCGA-AR-A1AN-01A-11D-A12Q-09 18 18 0 14 0 1 exome+100bp flanks 34834024 4 14 1.148303e-07 4.019059e-07 TCGA-AR-A1AO-01A-11D-A12Q-09 8 7 1 4 1.250000e-01 1 exome+100bp flanks 34834024 2 4 5.741513e-08 1.148303e-07 TCGA-AR-A1AP-01A-11D-A12Q-09 34 32 2 30 5.882353e-02 1 exome+100bp flanks 34834024 1 25 2.870756e-08 7.176891e-07 TCGA-AR-A1AQ-01A-11D-A12Q-09 43 42 1 35 2.325581e-02 1 exome+100bp flanks 34834024 6 31 1.722454e-07 8.899345e-07 TCGA-AR-A1AR-01A-31D-A135-09 53 51 2 40 3.773585e-02 1 exome+100bp flanks 34834024 11 38 3.157832e-07 1.090887e-06 TCGA-AR-A1AS-01A-11D-A12Q-09 40 38 2 28 5.000000e-02 1 exome+100bp flanks 34834024 9 27 2.583681e-07 7.751042e-07 TCGA-AR-A1AT-01A-11D-A12Q-09 30 28 2 21 6.666667e-02 1 exome+100bp flanks 34834024 6 19 1.722454e-07 5.454437e-07 TCGA-AR-A1AU-01A-11D-A12Q-09 20 18 2 14 1.000000e-01 1 exome+100bp flanks 34834024 4 13 1.148303e-07 3.731983e-07 TCGA-AR-A1AV-01A-21D-A12Q-09 40 38 2 33 5.000000e-02 1 exome+100bp flanks 34834024 5 29 1.435378e-07 8.325194e-07 TCGA-AR-A1AW-01A-21D-A12Q-09 20 19 1 16 5.000000e-02 1 exome+100bp flanks 34834024 3 15 8.612269e-08 4.306135e-07 TCGA-AR-A1AX-01A-11D-A12Q-09 14 13 1 11 7.142857e-02 1 exome+100bp flanks 34834024 1 11 2.870756e-08 3.157832e-07 TCGA-AR-A1AY-01A-21D-A12Q-09 49 48 1 38 2.040816e-02 1 exome+100bp flanks 34834024 9 34 2.583681e-07 9.760572e-07 TCGA-AR-A24H-01A-11D-A167-09 125 121 4 98 3.200000e-02 1 exome+100bp flanks 34834024 20 94 5.741513e-07 2.698511e-06 TCGA-AR-A24K-01A-11D-A167-09 27 26 1 20 3.703704e-02 1 exome+100bp flanks 34834024 5 18 1.435378e-07 5.167362e-07 TCGA-AR-A24L-01A-11D-A167-09 43 42 1 31 2.325581e-02 1 exome+100bp flanks 34834024 11 29 3.157832e-07 8.325194e-07 TCGA-AR-A24M-01A-11D-A167-09 22 19 3 13 1.363636e-01 1 exome+100bp flanks 34834024 5 13 1.435378e-07 3.731983e-07 TCGA-AR-A24N-01A-11D-A167-09 33 29 4 23 1.212121e-01 1 exome+100bp flanks 34834024 6 21 1.722454e-07 6.028589e-07 TCGA-AR-A24O-01A-11D-A167-09 18 17 1 14 5.555556e-02 1 exome+100bp flanks 34834024 3 13 8.612269e-08 3.731983e-07 TCGA-AR-A24P-01A-11D-A167-09 18 17 1 16 5.555556e-02 1 exome+100bp flanks 34834024 1 13 2.870756e-08 3.731983e-07 TCGA-AR-A24Q-01A-12D-A167-09 144 141 3 103 2.083333e-02 0 coding only 34834024 33 98 9.473496e-07 2.813341e-06 TCGA-AR-A24R-01A-11D-A167-09 24 23 1 18 4.166667e-02 1 exome+100bp flanks 34834024 5 18 1.435378e-07 5.167362e-07 TCGA-AR-A24S-01A-11D-A167-09 42 40 2 29 4.761905e-02 1 exome+100bp flanks 34834024 10 25 2.870756e-07 7.176891e-07 TCGA-AR-A24T-01A-11D-A167-09 21 20 1 16 4.761905e-02 1 exome+100bp flanks 34834024 3 13 8.612269e-08 3.731983e-07 TCGA-AR-A24U-01A-11D-A167-09 20 19 1 13 5.000000e-02 1 exome+100bp flanks 34834024 5 13 1.435378e-07 3.731983e-07 TCGA-AR-A24V-01A-21D-A167-09 26 25 1 17 3.846154e-02 1 exome+100bp flanks 34834024 6 14 1.722454e-07 4.019059e-07 TCGA-AR-A24W-01A-11D-A17G-09 7 6 1 6 1.428571e-01 1 exome+100bp flanks 34834024 0 5 0 1.435378e-07 TCGA-AR-A24X-01A-11D-A167-09 29 26 3 17 1.034483e-01 1 exome+100bp flanks 34834024 8 17 2.296605e-07 4.880286e-07 TCGA-AR-A24Z-01A-11D-A167-09 39 38 1 32 2.564103e-02 1 exome+100bp flanks 34834024 6 31 1.722454e-07 8.899345e-07 TCGA-AR-A250-01A-31D-A167-09 67 65 2 50 2.985075e-02 1 exome+100bp flanks 34834024 13 43 3.731983e-07 1.234425e-06 TCGA-AR-A251-01A-12D-A167-09 150 148 2 121 1.333333e-02 0 coding only 34834024 27 114 7.751042e-07 3.272662e-06 TCGA-AR-A252-01A-11D-A167-09 8 8 0 7 0 1 exome+100bp flanks 34834024 1 7 2.870756e-08 2.009530e-07 TCGA-AR-A254-01A-21D-A167-09 31 29 2 23 6.451613e-02 1 exome+100bp flanks 34834024 6 23 1.722454e-07 6.602740e-07 TCGA-AR-A255-01A-11D-A167-09 56 53 3 43 5.357143e-02 1 exome+100bp flanks 34834024 9 39 2.583681e-07 1.119595e-06 TCGA-AR-A256-01A-11D-A167-09 186 179 7 138 3.763441e-02 1 exome+100bp flanks 34834024 39 133 1.119595e-06 3.818106e-06 TCGA-AR-A2LE-01A-11D-A17W-09 315 298 17 219 5.396825e-02 1 exome+100bp flanks 34834024 71 213 2.038237e-06 6.114711e-06 TCGA-AR-A2LH-01A-31D-A18P-09 21 21 0 18 0 1 exome+100bp flanks 34834024 3 16 8.612269e-08 4.593210e-07 TCGA-AR-A2LJ-01A-12D-A19Y-09 15 11 4 8 2.666667e-01 1 exome+100bp flanks 34834024 3 8 8.612269e-08 2.296605e-07 TCGA-AR-A2LK-01A-11D-A17W-09 37 37 0 27 0 1 exome+100bp flanks 34834024 9 26 2.583681e-07 7.463967e-07 TCGA-AR-A2LL-01A-11D-A17W-09 29 29 0 25 0 1 exome+100bp flanks 34834024 2 25 5.741513e-08 7.176891e-07 TCGA-AR-A2LM-01A-11D-A17W-09 15 14 1 11 6.666667e-02 1 exome+100bp flanks 34834024 3 11 8.612269e-08 3.157832e-07 TCGA-AR-A2LN-01A-21D-A18P-09 37 37 0 25 0 1 exome+100bp flanks 34834024 11 20 3.157832e-07 5.741513e-07 TCGA-AR-A2LO-01A-31D-A18P-09 12 11 1 10 8.333333e-02 1 exome+100bp flanks 34834024 1 10 2.870756e-08 2.870756e-07 TCGA-AR-A2LQ-01A-22D-A18P-09 6 4 2 3 3.333333e-01 1 exome+100bp flanks 34834024 1 3 2.870756e-08 8.612269e-08 TCGA-AR-A2LR-01A-12D-A18P-09 61 59 2 46 3.278689e-02 1 exome+100bp flanks 34834024 13 44 3.731983e-07 1.263133e-06 TCGA-AR-A5QM-01A-11D-A27P-09 34 24 10 20 2.941176e-01 1 exome+100bp flanks 34834024 4 19 1.148303e-07 5.454437e-07 TCGA-AR-A5QN-01A-12D-A28B-09 43 35 8 26 1.860465e-01 1 exome+100bp flanks 34834024 8 23 2.296605e-07 6.602740e-07 TCGA-AR-A5QP-01A-11D-A28B-09 26 23 3 21 1.153846e-01 1 exome+100bp flanks 34834024 1 19 2.870756e-08 5.454437e-07 TCGA-AR-A5QQ-01A-11D-A28B-09 61 53 8 42 1.311475e-01 1 exome+100bp flanks 34834024 9 38 2.583681e-07 1.090887e-06 TCGA-B6-A0I1-01A-11D-A21Q-09 64 49 15 37 2.343750e-01 1 exome+100bp flanks 34834024 10 32 2.870756e-07 9.186421e-07 TCGA-B6-A0I2-01A-11W-A050-09 51 48 3 39 5.882353e-02 1 exome+100bp flanks 34834024 8 35 2.296605e-07 1.004765e-06 TCGA-B6-A0I5-01A-11W-A100-09 23 20 3 16 1.304348e-01 1 exome+100bp flanks 34834024 4 16 1.148303e-07 4.593210e-07 TCGA-B6-A0I6-01A-11D-A128-09 102 90 12 69 1.176471e-01 1 exome+100bp flanks 34834024 19 68 5.454437e-07 1.952114e-06 TCGA-B6-A0I8-01A-11W-A050-09 106 103 3 76 2.830189e-02 0 coding only 34834024 26 69 7.463967e-07 1.980822e-06 TCGA-B6-A0I9-01A-11W-A050-09 73 68 5 57 6.849315e-02 1 exome+100bp flanks 34834024 11 55 3.157832e-07 1.578916e-06 TCGA-B6-A0IA-01A-11W-A050-09 48 46 2 40 4.166667e-02 1 exome+100bp flanks 34834024 5 37 1.435378e-07 1.062180e-06 TCGA-B6-A0IB-01A-11W-A050-09 57 57 0 49 0 1 exome+100bp flanks 34834024 8 43 2.296605e-07 1.234425e-06 TCGA-B6-A0IC-01A-11W-A050-09 46 41 5 34 1.086957e-01 1 exome+100bp flanks 34834024 7 31 2.009530e-07 8.899345e-07 TCGA-B6-A0IE-01A-11W-A050-09 31 29 2 26 6.451613e-02 1 exome+100bp flanks 34834024 3 25 8.612269e-08 7.176891e-07 TCGA-B6-A0IG-01A-11W-A050-09 45 42 3 37 6.666667e-02 1 exome+100bp flanks 34834024 5 35 1.435378e-07 1.004765e-06 TCGA-B6-A0IH-01A-11D-A10Y-09 23 23 0 20 0 1 exome+100bp flanks 34834024 3 20 8.612269e-08 5.741513e-07 TCGA-B6-A0IJ-01A-11W-A050-09 135 126 9 107 6.666667e-02 1 exome+100bp flanks 34834024 18 97 5.167362e-07 2.784634e-06 TCGA-B6-A0IK-01A-12W-A071-09 150 137 13 105 8.666667e-02 1 exome+100bp flanks 34834024 30 99 8.612269e-07 2.842049e-06 TCGA-B6-A0IM-01A-11W-A050-09 35 33 2 26 5.714286e-02 1 exome+100bp flanks 34834024 7 25 2.009530e-07 7.176891e-07 TCGA-B6-A0IN-01A-11W-A050-09 40 34 6 25 1.500000e-01 1 exome+100bp flanks 34834024 9 24 2.583681e-07 6.889816e-07 TCGA-B6-A0IO-01A-11W-A050-09 68 62 6 46 8.823529e-02 1 exome+100bp flanks 34834024 16 44 4.593210e-07 1.263133e-06 TCGA-B6-A0IP-01A-11D-A045-09 26 25 1 21 3.846154e-02 1 exome+100bp flanks 34834024 4 18 1.148303e-07 5.167362e-07 TCGA-B6-A0IQ-01A-11W-A050-09 58 56 2 44 3.448276e-02 1 exome+100bp flanks 34834024 9 42 2.583681e-07 1.205718e-06 TCGA-B6-A0RE-01A-11W-A071-09 103 99 4 78 3.883495e-02 1 exome+100bp flanks 34834024 21 73 6.028589e-07 2.095652e-06 TCGA-B6-A0RG-01A-11W-A071-09 60 57 3 48 5.000000e-02 1 exome+100bp flanks 34834024 9 47 2.583681e-07 1.349256e-06 TCGA-B6-A0RH-01A-21D-A10Y-09 40 36 4 29 1.000000e-01 1 exome+100bp flanks 34834024 7 26 2.009530e-07 7.463967e-07 TCGA-B6-A0RI-01A-11W-A071-09 17 16 1 13 5.882353e-02 1 exome+100bp flanks 34834024 3 13 8.612269e-08 3.731983e-07 TCGA-B6-A0RN-01A-12D-A099-09 38 37 1 26 2.631579e-02 1 exome+100bp flanks 34834024 11 25 3.157832e-07 7.176891e-07 TCGA-B6-A0RO-01A-22D-A099-09 37 34 3 28 8.108108e-02 1 exome+100bp flanks 34834024 6 24 1.722454e-07 6.889816e-07 TCGA-B6-A0RP-01A-21D-A099-09 20 19 1 16 5.000000e-02 1 exome+100bp flanks 34834024 3 13 8.612269e-08 3.731983e-07 TCGA-B6-A0RQ-01A-11D-A10Y-09 17 15 2 10 1.176471e-01 1 exome+100bp flanks 34834024 4 10 1.148303e-07 2.870756e-07 TCGA-B6-A0RT-01A-21D-A099-09 12 12 0 11 0 1 exome+100bp flanks 34834024 1 11 2.870756e-08 3.157832e-07 TCGA-B6-A0RU-01A-11D-A099-09 43 41 2 33 4.651163e-02 1 exome+100bp flanks 34834024 7 29 2.009530e-07 8.325194e-07 TCGA-B6-A0RV-01A-11D-A099-09 46 44 2 30 4.347826e-02 1 exome+100bp flanks 34834024 14 25 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40 2.870756e-07 1.148303e-06 TCGA-BH-A209-01A-11D-A17G-09 75 74 1 55 1.333333e-02 1 exome+100bp flanks 34834024 19 49 5.454437e-07 1.406671e-06 TCGA-BH-A28O-01A-11D-A228-09 24 18 6 12 2.500000e-01 1 exome+100bp flanks 34834024 4 11 1.148303e-07 3.157832e-07 TCGA-BH-A28Q-01A-11D-A16D-09 23 22 1 15 4.347826e-02 1 exome+100bp flanks 34834024 4 15 1.148303e-07 4.306135e-07 TCGA-BH-A2L8-01A-11D-A18P-09 416 401 15 289 3.605769e-02 1 exome+100bp flanks 34834024 107 265 3.071709e-06 7.607505e-06 TCGA-BH-A42T-01A-11D-A243-09 37 31 6 24 1.621622e-01 1 exome+100bp flanks 34834024 6 21 1.722454e-07 6.028589e-07 TCGA-BH-A42U-01A-12D-A243-09 14 10 4 8 2.857143e-01 1 exome+100bp flanks 34834024 1 5 2.870756e-08 1.435378e-07 TCGA-BH-A42V-01A-11D-A243-09 37 34 3 30 8.108108e-02 1 exome+100bp flanks 34834024 3 29 8.612269e-08 8.325194e-07 TCGA-BH-A5IZ-01A-11D-A27P-09 93 75 18 59 1.935484e-01 1 exome+100bp flanks 34834024 14 55 4.019059e-07 1.578916e-06 TCGA-BH-A5J0-01A-11D-A27P-09 67 58 9 49 1.343284e-01 1 exome+100bp flanks 34834024 9 47 2.583681e-07 1.349256e-06 TCGA-C8-A12K-01A-21D-A10Y-09 107 105 2 78 1.869159e-02 0 coding only 34834024 25 75 7.176891e-07 2.153067e-06 TCGA-C8-A12L-01A-11D-A10Y-09 72 67 5 56 6.944444e-02 1 exome+100bp flanks 34834024 11 53 3.157832e-07 1.521501e-06 TCGA-C8-A12M-01A-11D-A135-09 57 55 2 44 3.508772e-02 1 exome+100bp flanks 34834024 10 39 2.870756e-07 1.119595e-06 TCGA-C8-A12N-01A-11D-A10Y-09 24 24 0 16 0 1 exome+100bp flanks 34834024 8 14 2.296605e-07 4.019059e-07 TCGA-C8-A12O-01A-11D-A10Y-09 30 28 2 24 6.666667e-02 1 exome+100bp flanks 34834024 4 23 1.148303e-07 6.602740e-07 TCGA-C8-A12P-01A-11D-A10Y-09 155 147 8 113 5.161290e-02 1 exome+100bp flanks 34834024 33 107 9.473496e-07 3.071709e-06 TCGA-C8-A12Q-01A-11D-A10Y-09 100 96 4 73 4.000000e-02 1 exome+100bp flanks 34834024 20 69 5.741513e-07 1.980822e-06 TCGA-C8-A12T-01A-11D-A10Y-09 154 149 5 120 3.246753e-02 1 exome+100bp flanks 34834024 27 110 7.751042e-07 3.157832e-06 TCGA-C8-A12U-01A-11D-A10Y-09 36 34 2 27 5.555556e-02 1 exome+100bp flanks 34834024 7 24 2.009530e-07 6.889816e-07 TCGA-C8-A12V-01A-11D-A10Y-09 15 13 2 11 1.333333e-01 1 exome+100bp flanks 34834024 2 11 5.741513e-08 3.157832e-07 TCGA-C8-A12W-01A-11D-A10Y-09 46 43 3 34 6.521739e-02 1 exome+100bp flanks 34834024 8 32 2.296605e-07 9.186421e-07 TCGA-C8-A12X-01A-11D-A10Y-09 44 43 1 33 2.272727e-02 1 exome+100bp flanks 34834024 9 32 2.583681e-07 9.186421e-07 TCGA-C8-A12Y-01A-11D-A12B-09 32 29 3 20 9.375000e-02 1 exome+100bp flanks 34834024 9 19 2.583681e-07 5.454437e-07 TCGA-C8-A12Z-01A-11D-A10Y-09 48 47 1 37 2.083333e-02 1 exome+100bp flanks 34834024 9 36 2.583681e-07 1.033472e-06 TCGA-C8-A130-01A-31D-A10Y-09 39 36 3 23 7.692308e-02 1 exome+100bp flanks 34834024 13 21 3.731983e-07 6.028589e-07 TCGA-C8-A131-01A-11D-A10Y-09 55 51 4 39 7.272727e-02 1 exome+100bp flanks 34834024 11 37 3.157832e-07 1.062180e-06 TCGA-C8-A132-01A-31D-A10Y-09 50 49 1 38 2.000000e-02 1 exome+100bp flanks 34834024 11 35 3.157832e-07 1.004765e-06 TCGA-C8-A133-01A-32D-A12B-09 22 22 0 17 0 1 exome+100bp flanks 34834024 5 16 1.435378e-07 4.593210e-07 TCGA-C8-A134-01A-11D-A10Y-09 96 93 3 72 3.125000e-02 1 exome+100bp flanks 34834024 19 65 5.454437e-07 1.865992e-06 TCGA-C8-A135-01A-11D-A10Y-09 49 45 4 36 8.163265e-02 1 exome+100bp flanks 34834024 9 33 2.583681e-07 9.473496e-07 TCGA-C8-A137-01A-11D-A10Y-09 47 45 2 36 4.255319e-02 1 exome+100bp flanks 34834024 8 31 2.296605e-07 8.899345e-07 TCGA-C8-A138-01A-11D-A10Y-09 47 43 4 34 8.510638e-02 1 exome+100bp flanks 34834024 9 32 2.583681e-07 9.186421e-07 TCGA-C8-A1HE-01A-11D-A188-09 39 39 0 29 0 1 exome+100bp flanks 34834024 10 25 2.870756e-07 7.176891e-07 TCGA-C8-A1HF-01A-11D-A135-09 33 28 5 21 1.515152e-01 1 exome+100bp flanks 34834024 7 20 2.009530e-07 5.741513e-07 TCGA-C8-A1HG-01A-11D-A135-09 45 41 4 25 8.888889e-02 1 exome+100bp flanks 34834024 12 24 3.444908e-07 6.889816e-07 TCGA-C8-A1HI-01A-11D-A135-09 37 34 3 25 8.108108e-02 1 exome+100bp flanks 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1.741573e-01 1 exome+100bp flanks 34834024 36 103 1.033472e-06 2.956879e-06 TCGA-C8-A3M8-01A-11D-A20S-09 59 47 12 40 2.033898e-01 1 exome+100bp flanks 34834024 6 37 1.722454e-07 1.062180e-06 TCGA-D8-A13Y-01A-11D-A10Y-09 66 64 2 47 3.030303e-02 1 exome+100bp flanks 34834024 16 47 4.593210e-07 1.349256e-06 TCGA-D8-A13Z-01A-11D-A10Y-09 62 60 2 52 3.225806e-02 1 exome+100bp flanks 34834024 6 48 1.722454e-07 1.377963e-06 TCGA-D8-A140-01A-11D-A10Y-09 91 86 5 67 5.494505e-02 1 exome+100bp flanks 34834024 18 63 5.167362e-07 1.808577e-06 TCGA-D8-A141-01A-11D-A10Y-09 17 16 1 13 5.882353e-02 1 exome+100bp flanks 34834024 3 12 8.612269e-08 3.444908e-07 TCGA-D8-A142-01A-11D-A10Y-09 65 59 6 41 9.230769e-02 1 exome+100bp flanks 34834024 17 39 4.880286e-07 1.119595e-06 TCGA-D8-A143-01A-11D-A10Y-09 42 41 1 35 2.380952e-02 1 exome+100bp flanks 34834024 5 29 1.435378e-07 8.325194e-07 TCGA-D8-A145-01A-11D-A10Y-09 27 26 1 19 3.703704e-02 1 exome+100bp flanks 34834024 7 18 2.009530e-07 5.167362e-07 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34834024 2 24 5.741513e-08 6.889816e-07 TCGA-D8-A1JF-01A-11D-A13L-09 43 41 2 35 4.651163e-02 1 exome+100bp flanks 34834024 6 31 1.722454e-07 8.899345e-07 TCGA-D8-A1JG-01B-11D-A13L-09 111 106 5 83 4.504505e-02 1 exome+100bp flanks 34834024 22 78 6.315664e-07 2.239190e-06 TCGA-D8-A1JH-01A-11D-A188-09 18 16 2 13 1.111111e-01 1 exome+100bp flanks 34834024 3 13 8.612269e-08 3.731983e-07 TCGA-D8-A1JI-01A-11D-A13L-09 35 33 2 22 5.714286e-02 1 exome+100bp flanks 34834024 11 20 3.157832e-07 5.741513e-07 TCGA-D8-A1JJ-01A-31D-A14K-09 72 65 7 44 9.722222e-02 1 exome+100bp flanks 34834024 19 38 5.454437e-07 1.090887e-06 TCGA-D8-A1JK-01A-11D-A13L-09 179 171 8 129 4.469274e-02 1 exome+100bp flanks 34834024 37 119 1.062180e-06 3.416200e-06 TCGA-D8-A1JL-01A-11D-A13L-09 107 101 6 73 5.607477e-02 1 exome+100bp flanks 34834024 22 68 6.315664e-07 1.952114e-06 TCGA-D8-A1JM-01A-11D-A13L-09 41 41 0 28 0 1 exome+100bp flanks 34834024 12 25 3.444908e-07 7.176891e-07 TCGA-D8-A1JN-01A-11D-A13L-09 172 157 15 106 8.720930e-02 1 exome+100bp flanks 34834024 48 99 1.377963e-06 2.842049e-06 TCGA-D8-A1JP-01A-11D-A13L-09 105 100 5 80 4.761905e-02 1 exome+100bp flanks 34834024 18 73 5.167362e-07 2.095652e-06 TCGA-D8-A1JS-01A-11D-A13L-09 21 21 0 14 0 1 exome+100bp flanks 34834024 6 13 1.722454e-07 3.731983e-07 TCGA-D8-A1JT-01A-31D-A13L-09 32 32 0 25 0 1 exome+100bp flanks 34834024 6 23 1.722454e-07 6.602740e-07 TCGA-D8-A1JU-01A-11D-A13L-09 12 12 0 7 0 1 exome+100bp flanks 34834024 5 7 1.435378e-07 2.009530e-07 TCGA-D8-A1X5-01A-11D-A14G-09 48 46 2 29 4.166667e-02 1 exome+100bp flanks 34834024 17 29 4.880286e-07 8.325194e-07 TCGA-D8-A1X6-01A-11D-A14K-09 40 38 2 34 5.000000e-02 1 exome+100bp flanks 34834024 4 29 1.148303e-07 8.325194e-07 TCGA-D8-A1X7-01A-11D-A14K-09 25 23 2 20 8.000000e-02 1 exome+100bp flanks 34834024 3 19 8.612269e-08 5.454437e-07 TCGA-D8-A1X8-01A-11D-A14K-09 27 24 3 16 1.111111e-01 1 exome+100bp flanks 34834024 8 16 2.296605e-07 4.593210e-07 TCGA-D8-A1X9-01A-12D-A159-09 88 83 5 65 5.681818e-02 1 exome+100bp flanks 34834024 17 63 4.880286e-07 1.808577e-06 TCGA-D8-A1XA-01A-11D-A14G-09 26 26 0 22 0 1 exome+100bp flanks 34834024 3 20 8.612269e-08 5.741513e-07 TCGA-D8-A1XB-01A-11D-A14G-09 29 28 1 22 3.448276e-02 1 exome+100bp flanks 34834024 5 18 1.435378e-07 5.167362e-07 TCGA-D8-A1XC-01A-11D-A14G-09 29 28 1 23 3.448276e-02 1 exome+100bp flanks 34834024 4 23 1.148303e-07 6.602740e-07 TCGA-D8-A1XF-01A-11D-A14G-09 40 38 2 28 5.000000e-02 1 exome+100bp flanks 34834024 10 28 2.870756e-07 8.038118e-07 TCGA-D8-A1XG-01A-11D-A14G-09 24 24 0 17 0 1 exome+100bp flanks 34834024 6 17 1.722454e-07 4.880286e-07 TCGA-D8-A1XJ-01A-11D-A14K-09 80 78 2 60 2.500000e-02 1 exome+100bp flanks 34834024 15 58 4.306135e-07 1.665039e-06 TCGA-D8-A1XK-01A-21D-A14K-09 940 899 41 692 4.361702e-02 1 exome+100bp flanks 34834024 194 649 5.569268e-06 1.863121e-05 TCGA-D8-A1XL-01A-11D-A14K-09 91 88 3 79 3.296703e-02 1 exome+100bp flanks 34834024 8 72 2.296605e-07 2.066945e-06 TCGA-D8-A1XM-01A-21D-A14K-09 58 52 6 38 1.034483e-01 1 exome+100bp flanks 34834024 13 37 3.731983e-07 1.062180e-06 TCGA-D8-A1XO-01A-11D-A14K-09 18 17 1 11 5.555556e-02 1 exome+100bp flanks 34834024 6 10 1.722454e-07 2.870756e-07 TCGA-D8-A1XQ-01A-11D-A14K-09 724 700 24 543 3.314917e-02 1 exome+100bp flanks 34834024 147 508 4.220012e-06 1.458344e-05 TCGA-D8-A1XR-01A-11D-A14K-09 24 23 1 20 4.166667e-02 1 exome+100bp flanks 34834024 3 19 8.612269e-08 5.454437e-07 TCGA-D8-A1XS-01A-11D-A14K-09 20 19 1 10 5.000000e-02 1 exome+100bp flanks 34834024 8 10 2.296605e-07 2.870756e-07 TCGA-D8-A1XT-01A-11D-A14K-09 45 42 3 34 6.666667e-02 1 exome+100bp flanks 34834024 8 32 2.296605e-07 9.186421e-07 TCGA-D8-A1XU-01A-11D-A14K-09 26 26 0 15 0 1 exome+100bp flanks 34834024 8 12 2.296605e-07 3.444908e-07 TCGA-D8-A1XV-01A-11D-A14K-09 29 27 2 20 6.896552e-02 1 exome+100bp flanks 34834024 7 19 2.009530e-07 5.454437e-07 TCGA-D8-A1XW-01A-11D-A14K-09 86 80 6 63 6.976744e-02 1 exome+100bp flanks 34834024 16 60 4.593210e-07 1.722454e-06 TCGA-D8-A1XY-01A-11D-A14K-09 41 38 3 26 7.317073e-02 1 exome+100bp flanks 34834024 12 23 3.444908e-07 6.602740e-07 TCGA-D8-A1XZ-01A-11D-A14K-09 60 60 0 49 0 1 exome+100bp flanks 34834024 11 45 3.157832e-07 1.291840e-06 TCGA-D8-A1Y0-01A-11D-A14K-09 66 60 6 45 9.090909e-02 1 exome+100bp flanks 34834024 15 42 4.306135e-07 1.205718e-06 TCGA-D8-A1Y1-01A-21D-A14K-09 194 191 3 145 1.546392e-02 0 coding only 34834024 44 128 1.263133e-06 3.674568e-06 TCGA-D8-A1Y2-01A-11D-A159-09 23 21 2 17 8.695652e-02 1 exome+100bp flanks 34834024 4 16 1.148303e-07 4.593210e-07 TCGA-D8-A1Y3-01A-11D-A159-09 53 51 2 39 3.773585e-02 1 exome+100bp flanks 34834024 12 34 3.444908e-07 9.760572e-07 TCGA-D8-A27E-01A-11D-A16D-09 8 8 0 8 0 1 exome+100bp flanks 34834024 0 7 0 2.009530e-07 TCGA-D8-A27F-01A-11D-A16D-09 56 52 4 40 7.142857e-02 1 exome+100bp flanks 34834024 10 38 2.870756e-07 1.090887e-06 TCGA-D8-A27G-01A-11D-A16D-09 972 905 67 709 6.893004e-02 1 exome+100bp flanks 34834024 180 663 5.167362e-06 1.903312e-05 TCGA-D8-A27H-01A-11D-A16D-09 114 105 9 86 7.894737e-02 1 exome+100bp flanks 34834024 19 76 5.454437e-07 2.181775e-06 TCGA-D8-A27I-01A-11D-A16D-09 32 32 0 26 0 1 exome+100bp flanks 34834024 6 25 1.722454e-07 7.176891e-07 TCGA-D8-A27K-01A-11D-A16D-09 22 22 0 18 0 1 exome+100bp flanks 34834024 4 18 1.148303e-07 5.167362e-07 TCGA-D8-A27L-01A-11D-A16D-09 36 33 3 26 8.333333e-02 1 exome+100bp flanks 34834024 6 24 1.722454e-07 6.889816e-07 TCGA-D8-A27M-01A-11D-A16D-09 61 55 6 44 9.836066e-02 1 exome+100bp flanks 34834024 11 39 3.157832e-07 1.119595e-06 TCGA-D8-A27N-01A-11D-A16D-09 46 44 2 37 4.347826e-02 1 exome+100bp flanks 34834024 7 34 2.009530e-07 9.760572e-07 TCGA-D8-A27P-01A-11D-A16D-09 24 23 1 16 4.166667e-02 1 exome+100bp flanks 34834024 7 15 2.009530e-07 4.306135e-07 TCGA-D8-A27R-01A-11D-A16D-09 26 25 1 21 3.846154e-02 1 exome+100bp flanks 34834024 4 18 1.148303e-07 5.167362e-07 TCGA-D8-A27T-01A-11D-A16D-09 22 22 0 18 0 1 exome+100bp flanks 34834024 4 18 1.148303e-07 5.167362e-07 TCGA-D8-A27V-01A-12D-A17D-09 229 209 20 158 8.733624e-02 1 exome+100bp flanks 34834024 49 147 1.406671e-06 4.220012e-06 TCGA-D8-A27W-01A-11D-A16D-09 20 19 1 17 5.000000e-02 1 exome+100bp flanks 34834024 2 17 5.741513e-08 4.880286e-07 TCGA-D8-A3Z5-01A-41D-A243-09 30 23 7 13 2.333333e-01 1 exome+100bp flanks 34834024 8 11 2.296605e-07 3.157832e-07 TCGA-D8-A3Z6-01A-11D-A23C-09 34 31 3 23 8.823529e-02 1 exome+100bp flanks 34834024 7 20 2.009530e-07 5.741513e-07 TCGA-D8-A4Z1-01A-21D-A25Q-09 16 14 2 8 1.250000e-01 1 exome+100bp flanks 34834024 6 8 1.722454e-07 2.296605e-07 TCGA-E2-A105-01A-11D-A10M-09 58 56 2 43 3.448276e-02 1 exome+100bp flanks 34834024 12 41 3.444908e-07 1.177010e-06 TCGA-E2-A107-01A-11D-A10M-09 31 29 2 22 6.451613e-02 1 exome+100bp flanks 34834024 6 19 1.722454e-07 5.454437e-07 TCGA-E2-A108-01A-13D-A10M-09 53 52 1 39 1.886792e-02 1 exome+100bp flanks 34834024 12 34 3.444908e-07 9.760572e-07 TCGA-E2-A109-01A-11D-A10M-09 81 76 5 64 6.172840e-02 1 exome+100bp flanks 34834024 11 62 3.157832e-07 1.779869e-06 TCGA-E2-A10A-01A-21D-A10Y-09 20 20 0 15 0 1 exome+100bp flanks 34834024 5 14 1.435378e-07 4.019059e-07 TCGA-E2-A10B-01A-11D-A10M-09 38 36 2 28 5.263158e-02 1 exome+100bp flanks 34834024 8 28 2.296605e-07 8.038118e-07 TCGA-E2-A10C-01A-21D-A10M-09 355 343 12 254 3.380282e-02 1 exome+100bp flanks 34834024 83 234 2.382728e-06 6.717570e-06 TCGA-E2-A10E-01A-21D-A10M-09 25 23 2 20 8.000000e-02 1 exome+100bp flanks 34834024 3 20 8.612269e-08 5.741513e-07 TCGA-E2-A10F-01A-11D-A10M-09 26 26 0 20 0 1 exome+100bp flanks 34834024 6 17 1.722454e-07 4.880286e-07 TCGA-E2-A14N-01A-31D-A135-09 57 54 3 41 5.263158e-02 1 exome+100bp flanks 34834024 13 39 3.731983e-07 1.119595e-06 TCGA-E2-A14O-01A-31D-A10Y-09 35 34 1 30 2.857143e-02 1 exome+100bp flanks 34834024 4 26 1.148303e-07 7.463967e-07 TCGA-E2-A14P-01A-31D-A12B-09 82 75 7 52 8.536585e-02 1 exome+100bp flanks 34834024 22 48 6.315664e-07 1.377963e-06 TCGA-E2-A14Q-01A-11D-A12B-09 23 21 2 16 8.695652e-02 1 exome+100bp flanks 34834024 5 15 1.435378e-07 4.306135e-07 TCGA-E2-A14R-01A-11D-A10Y-09 105 102 3 88 2.857143e-02 0 coding only 34834024 13 75 3.731983e-07 2.153067e-06 TCGA-E2-A14S-01A-11D-A12B-09 35 31 4 23 1.142857e-01 1 exome+100bp flanks 34834024 7 21 2.009530e-07 6.028589e-07 TCGA-E2-A14T-01A-11D-A10Y-09 32 32 0 26 0 1 exome+100bp flanks 34834024 6 25 1.722454e-07 7.176891e-07 TCGA-E2-A14U-01A-11D-A228-09 20 15 5 11 2.500000e-01 1 exome+100bp flanks 34834024 4 11 1.148303e-07 3.157832e-07 TCGA-E2-A14V-01A-11D-A12B-09 75 68 7 55 9.333333e-02 1 exome+100bp flanks 34834024 13 51 3.731983e-07 1.464086e-06 TCGA-E2-A14W-01A-11D-A12B-09 83 80 3 65 3.614458e-02 1 exome+100bp flanks 34834024 12 58 3.444908e-07 1.665039e-06 TCGA-E2-A14X-01A-11D-A10Y-09 24 23 1 15 4.166667e-02 1 exome+100bp flanks 34834024 8 13 2.296605e-07 3.731983e-07 TCGA-E2-A14Y-01A-21D-A12B-09 35 33 2 25 5.714286e-02 1 exome+100bp flanks 34834024 8 23 2.296605e-07 6.602740e-07 TCGA-E2-A14Z-01A-11D-A10Y-09 62 58 4 41 6.451613e-02 1 exome+100bp flanks 34834024 17 39 4.880286e-07 1.119595e-06 TCGA-E2-A150-01A-11D-A12B-09 46 44 2 35 4.347826e-02 1 exome+100bp flanks 34834024 8 33 2.296605e-07 9.473496e-07 TCGA-E2-A152-01A-11D-A12B-09 121 116 5 91 4.132231e-02 1 exome+100bp flanks 34834024 23 79 6.602740e-07 2.267898e-06 TCGA-E2-A153-01A-12D-A12B-09 23 23 0 18 0 1 exome+100bp flanks 34834024 4 16 1.148303e-07 4.593210e-07 TCGA-E2-A154-01A-11D-A10Y-09 41 39 2 30 4.878049e-02 1 exome+100bp flanks 34834024 9 28 2.583681e-07 8.038118e-07 TCGA-E2-A155-01A-11D-A12B-09 55 53 2 39 3.636364e-02 1 exome+100bp flanks 34834024 14 35 4.019059e-07 1.004765e-06 TCGA-E2-A156-01A-11D-A12B-09 17 15 2 15 1.176471e-01 1 exome+100bp flanks 34834024 0 14 0 4.019059e-07 TCGA-E2-A158-01A-11D-A12B-09 87 81 6 72 6.896552e-02 1 exome+100bp flanks 34834024 9 69 2.583681e-07 1.980822e-06 TCGA-E2-A159-01A-11D-A10Y-09 148 141 7 110 4.729730e-02 1 exome+100bp flanks 34834024 29 103 8.325194e-07 2.956879e-06 TCGA-E2-A15A-01A-11D-A12B-09 40 38 2 36 5.000000e-02 1 exome+100bp flanks 34834024 2 34 5.741513e-08 9.760572e-07 TCGA-E2-A15C-01A-31D-A12B-09 29 28 1 21 3.448276e-02 1 exome+100bp flanks 34834024 7 21 2.009530e-07 6.028589e-07 TCGA-E2-A15D-01A-11D-A10Y-09 28 28 0 24 0 1 exome+100bp flanks 34834024 4 22 1.148303e-07 6.315664e-07 TCGA-E2-A15E-01A-11D-A12B-09 28 27 1 22 3.571429e-02 1 exome+100bp flanks 34834024 5 21 1.435378e-07 6.028589e-07 TCGA-E2-A15F-01A-11D-A10Y-09 21 21 0 19 0 1 exome+100bp flanks 34834024 2 19 5.741513e-08 5.454437e-07 TCGA-E2-A15G-01A-11D-A12B-09 59 57 2 39 3.389831e-02 1 exome+100bp flanks 34834024 17 38 4.880286e-07 1.090887e-06 TCGA-E2-A15H-01A-11D-A12B-09 32 28 4 25 1.250000e-01 1 exome+100bp flanks 34834024 3 25 8.612269e-08 7.176891e-07 TCGA-E2-A15I-01A-21D-A135-09 127 102 25 73 1.968504e-01 1 exome+100bp flanks 34834024 29 69 8.325194e-07 1.980822e-06 TCGA-E2-A15J-01A-11D-A12Q-09 24 23 1 18 4.166667e-02 1 exome+100bp flanks 34834024 5 17 1.435378e-07 4.880286e-07 TCGA-E2-A15K-01A-11D-A12Q-09 40 40 0 32 0 1 exome+100bp flanks 34834024 7 31 2.009530e-07 8.899345e-07 TCGA-E2-A15L-01A-11D-A12B-09 32 30 2 28 6.250000e-02 1 exome+100bp flanks 34834024 2 26 5.741513e-08 7.463967e-07 TCGA-E2-A15M-01A-11D-A12B-09 66 65 1 48 1.515152e-02 1 exome+100bp flanks 34834024 17 47 4.880286e-07 1.349256e-06 TCGA-E2-A15O-01A-11D-A10Y-09 35 33 2 25 5.714286e-02 1 exome+100bp flanks 34834024 6 25 1.722454e-07 7.176891e-07 TCGA-E2-A15P-01A-11D-A10Y-09 45 43 2 38 4.444444e-02 1 exome+100bp flanks 34834024 5 37 1.435378e-07 1.062180e-06 TCGA-E2-A15R-01A-11D-A10Y-09 42 40 2 30 4.761905e-02 1 exome+100bp flanks 34834024 9 27 2.583681e-07 7.751042e-07 TCGA-E2-A15S-01A-11D-A10Y-09 45 43 2 32 4.444444e-02 1 exome+100bp flanks 34834024 11 30 3.157832e-07 8.612269e-07 TCGA-E2-A15T-01A-11D-A10Y-09 43 43 0 32 0 1 exome+100bp flanks 34834024 10 25 2.870756e-07 7.176891e-07 TCGA-E2-A1AZ-01A-11D-A12Q-09 53 51 2 36 3.773585e-02 1 exome+100bp flanks 34834024 15 34 4.306135e-07 9.760572e-07 TCGA-E2-A1B0-01A-11D-A12Q-09 40 39 1 27 2.500000e-02 1 exome+100bp flanks 34834024 11 24 3.157832e-07 6.889816e-07 TCGA-E2-A1B1-01A-21D-A12Q-09 14 13 1 9 7.142857e-02 1 exome+100bp flanks 34834024 4 9 1.148303e-07 2.583681e-07 TCGA-E2-A1B4-01A-11D-A12Q-09 34 30 4 27 1.176471e-01 1 exome+100bp flanks 34834024 3 26 8.612269e-08 7.463967e-07 TCGA-E2-A1B5-01A-21D-A12Q-09 15 15 0 12 0 1 exome+100bp flanks 34834024 3 12 8.612269e-08 3.444908e-07 TCGA-E2-A1B6-01A-31D-A12Q-09 11 10 1 8 9.090909e-02 1 exome+100bp flanks 34834024 1 8 2.870756e-08 2.296605e-07 TCGA-E2-A1BC-01A-11D-A14G-09 34 29 5 22 1.470588e-01 1 exome+100bp flanks 34834024 7 19 2.009530e-07 5.454437e-07 TCGA-E2-A1BD-01A-11D-A12Q-09 29 29 0 24 0 1 exome+100bp flanks 34834024 4 24 1.148303e-07 6.889816e-07 TCGA-E2-A1IE-01A-11D-A188-09 20 17 3 15 1.500000e-01 1 exome+100bp flanks 34834024 2 15 5.741513e-08 4.306135e-07 TCGA-E2-A1IF-01A-11D-A142-09 15 15 0 14 0 1 exome+100bp flanks 34834024 1 12 2.870756e-08 3.444908e-07 TCGA-E2-A1IG-01A-11D-A142-09 41 39 2 30 4.878049e-02 1 exome+100bp flanks 34834024 8 27 2.296605e-07 7.751042e-07 TCGA-E2-A1IH-01A-11D-A188-09 62 61 1 51 1.612903e-02 1 exome+100bp flanks 34834024 9 49 2.583681e-07 1.406671e-06 TCGA-E2-A1II-01A-11D-A142-09 27 25 2 20 7.407407e-02 1 exome+100bp flanks 34834024 5 19 1.435378e-07 5.454437e-07 TCGA-E2-A1IJ-01A-11D-A142-09 18 17 1 14 5.555556e-02 1 exome+100bp flanks 34834024 2 13 5.741513e-08 3.731983e-07 TCGA-E2-A1IK-01A-11D-A17G-09 17 13 4 10 2.352941e-01 1 exome+100bp flanks 34834024 3 10 8.612269e-08 2.870756e-07 TCGA-E2-A1IL-01A-11D-A14G-09 21 20 1 16 4.761905e-02 1 exome+100bp flanks 34834024 4 15 1.148303e-07 4.306135e-07 TCGA-E2-A1IN-01A-11D-A13L-09 193 186 7 134 3.626943e-02 1 exome+100bp flanks 34834024 49 121 1.406671e-06 3.473615e-06 TCGA-E2-A1IO-01A-11D-A142-09 14 13 1 12 7.142857e-02 1 exome+100bp flanks 34834024 1 12 2.870756e-08 3.444908e-07 TCGA-E2-A1IU-01A-11D-A14G-09 24 20 4 15 1.666667e-01 1 exome+100bp flanks 34834024 5 14 1.435378e-07 4.019059e-07 TCGA-E2-A1L6-01A-11D-A13L-09 19 17 2 13 1.052632e-01 1 exome+100bp flanks 34834024 4 13 1.148303e-07 3.731983e-07 TCGA-E2-A1L7-01A-11D-A142-09 64 61 3 53 4.687500e-02 1 exome+100bp flanks 34834024 8 49 2.296605e-07 1.406671e-06 TCGA-E2-A1L8-01A-11D-A13L-09 30 27 3 21 1.000000e-01 1 exome+100bp flanks 34834024 5 20 1.435378e-07 5.741513e-07 TCGA-E2-A1L9-01A-11D-A13L-09 23 22 1 18 4.347826e-02 1 exome+100bp flanks 34834024 4 14 1.148303e-07 4.019059e-07 TCGA-E2-A1LA-01A-11D-A142-09 83 80 3 59 3.614458e-02 1 exome+100bp flanks 34834024 21 55 6.028589e-07 1.578916e-06 TCGA-E2-A1LB-01A-11D-A142-09 39 37 2 30 5.128205e-02 1 exome+100bp flanks 34834024 7 27 2.009530e-07 7.751042e-07 TCGA-E2-A1LE-01A-12D-A19Y-09 80 66 14 52 1.750000e-01 1 exome+100bp flanks 34834024 11 47 3.157832e-07 1.349256e-06 TCGA-E2-A1LG-01A-21D-A14K-09 127 117 10 86 7.874016e-02 1 exome+100bp flanks 34834024 30 80 8.612269e-07 2.296605e-06 TCGA-E2-A1LH-01A-11D-A14G-09 149 145 4 117 2.684564e-02 0 coding only 34834024 27 109 7.751042e-07 3.129125e-06 TCGA-E2-A1LI-01A-12D-A159-09 14 12 2 9 1.428571e-01 1 exome+100bp flanks 34834024 2 7 5.741513e-08 2.009530e-07 TCGA-E2-A1LK-01A-21D-A14G-09 44 40 4 26 9.090909e-02 1 exome+100bp flanks 34834024 13 23 3.731983e-07 6.602740e-07 TCGA-E2-A1LL-01A-11D-A142-09 25 22 3 17 1.200000e-01 1 exome+100bp flanks 34834024 4 15 1.148303e-07 4.306135e-07 TCGA-E2-A1LS-01A-12D-A159-09 73 69 4 55 5.479452e-02 1 exome+100bp flanks 34834024 12 52 3.444908e-07 1.492793e-06 TCGA-E2-A2P5-01A-11D-A19Y-09 105 87 18 66 1.714286e-01 1 exome+100bp flanks 34834024 20 61 5.741513e-07 1.751161e-06 TCGA-E2-A2P6-01A-11D-A19Y-09 165 141 24 96 1.454545e-01 1 exome+100bp flanks 34834024 41 92 1.177010e-06 2.641096e-06 TCGA-E2-A3DX-01A-21D-A20S-09 21 13 8 8 3.809524e-01 1 exome+100bp flanks 34834024 3 8 8.612269e-08 2.296605e-07 TCGA-E2-A56Z-01A-12D-A29N-09 53 47 6 40 1.132075e-01 1 exome+100bp flanks 34834024 5 37 1.435378e-07 1.062180e-06 TCGA-E2-A570-01A-11D-A29N-09 33 27 6 21 1.818182e-01 1 exome+100bp flanks 34834024 4 18 1.148303e-07 5.167362e-07 TCGA-E2-A573-01A-11D-A29N-09 61 50 11 39 1.803279e-01 1 exome+100bp flanks 34834024 10 36 2.870756e-07 1.033472e-06 TCGA-E2-A574-01A-11D-A29N-09 121 101 20 71 1.652893e-01 1 exome+100bp flanks 34834024 28 66 8.038118e-07 1.894699e-06 TCGA-E9-A1N3-01A-12D-A159-09 27 25 2 22 7.407407e-02 1 exome+100bp flanks 34834024 3 21 8.612269e-08 6.028589e-07 TCGA-E9-A1N4-01A-11D-A14K-09 27 21 6 15 2.222222e-01 1 exome+100bp flanks 34834024 5 15 1.435378e-07 4.306135e-07 TCGA-E9-A1N5-01A-11D-A14G-09 29 27 2 21 6.896552e-02 1 exome+100bp flanks 34834024 5 21 1.435378e-07 6.028589e-07 TCGA-E9-A1N8-01A-11D-A142-09 28 25 3 22 1.071429e-01 1 exome+100bp flanks 34834024 3 21 8.612269e-08 6.028589e-07 TCGA-E9-A1N9-01A-11D-A14G-09 49 47 2 39 4.081633e-02 1 exome+100bp flanks 34834024 7 37 2.009530e-07 1.062180e-06 TCGA-E9-A1NA-01A-11D-A142-09 92 88 4 71 4.347826e-02 1 exome+100bp flanks 34834024 17 68 4.880286e-07 1.952114e-06 TCGA-E9-A1NC-01A-12W-A16L-09 111 108 3 95 2.702703e-02 0 coding only 34834024 13 85 3.731983e-07 2.440143e-06 TCGA-E9-A1ND-01A-11D-A142-09 67 64 3 51 4.477612e-02 1 exome+100bp flanks 34834024 13 48 3.731983e-07 1.377963e-06 TCGA-E9-A1NE-01A-21D-A14K-09 34 32 2 29 5.882353e-02 1 exome+100bp flanks 34834024 3 26 8.612269e-08 7.463967e-07 TCGA-E9-A1NF-01A-11D-A14G-09 44 43 1 35 2.272727e-02 1 exome+100bp flanks 34834024 8 30 2.296605e-07 8.612269e-07 TCGA-E9-A1NG-01A-21D-A14K-09 19 16 3 13 1.578947e-01 1 exome+100bp flanks 34834024 3 11 8.612269e-08 3.157832e-07 TCGA-E9-A1NH-01A-11D-A14G-09 27 24 3 17 1.111111e-01 1 exome+100bp flanks 34834024 7 17 2.009530e-07 4.880286e-07 TCGA-E9-A1NI-01A-11W-A16H-09 89 85 4 81 4.494382e-02 1 exome+100bp flanks 34834024 4 74 1.148303e-07 2.124360e-06 TCGA-E9-A1QZ-01A-21D-A167-09 10 10 0 9 0 1 exome+100bp flanks 34834024 1 8 2.870756e-08 2.296605e-07 TCGA-E9-A1R0-01A-22D-A16D-09 25 23 2 18 8.000000e-02 1 exome+100bp flanks 34834024 5 17 1.435378e-07 4.880286e-07 TCGA-E9-A1R2-01A-11D-A14G-09 54 52 2 43 3.703704e-02 1 exome+100bp flanks 34834024 9 38 2.583681e-07 1.090887e-06 TCGA-E9-A1R3-01A-31D-A14K-09 24 23 1 18 4.166667e-02 1 exome+100bp flanks 34834024 4 18 1.148303e-07 5.167362e-07 TCGA-E9-A1R4-01A-21D-A14G-09 97 94 3 74 3.092784e-02 1 exome+100bp flanks 34834024 20 71 5.741513e-07 2.038237e-06 TCGA-E9-A1R5-01A-11D-A14K-09 34 34 0 25 0 1 exome+100bp flanks 34834024 9 25 2.583681e-07 7.176891e-07 TCGA-E9-A1R6-01A-11D-A14G-09 26 26 0 19 0 1 exome+100bp flanks 34834024 7 17 2.009530e-07 4.880286e-07 TCGA-E9-A1R7-01A-11D-A14K-09 53 49 4 38 7.547170e-02 1 exome+100bp flanks 34834024 9 37 2.583681e-07 1.062180e-06 TCGA-E9-A1RA-01A-11D-A14G-09 21 20 1 12 4.761905e-02 1 exome+100bp flanks 34834024 7 12 2.009530e-07 3.444908e-07 TCGA-E9-A1RB-01A-11D-A17G-09 31 27 4 18 1.290323e-01 1 exome+100bp flanks 34834024 9 18 2.583681e-07 5.167362e-07 TCGA-E9-A1RC-01A-11D-A159-09 48 47 1 35 2.083333e-02 1 exome+100bp flanks 34834024 12 33 3.444908e-07 9.473496e-07 TCGA-E9-A1RD-01A-11D-A159-09 25 24 1 19 4.000000e-02 1 exome+100bp flanks 34834024 5 17 1.435378e-07 4.880286e-07 TCGA-E9-A1RE-01A-11D-A159-09 47 42 5 34 1.063830e-01 1 exome+100bp flanks 34834024 8 31 2.296605e-07 8.899345e-07 TCGA-E9-A1RF-01A-11D-A159-09 130 122 8 100 6.153846e-02 1 exome+100bp flanks 34834024 21 93 6.028589e-07 2.669804e-06 TCGA-E9-A1RG-01A-11D-A14G-09 38 37 1 30 2.631579e-02 1 exome+100bp flanks 34834024 7 27 2.009530e-07 7.751042e-07 TCGA-E9-A1RH-01A-21D-A167-09 81 77 4 61 4.938272e-02 1 exome+100bp flanks 34834024 16 56 4.593210e-07 1.607624e-06 TCGA-E9-A1RI-01A-11D-A167-09 16 16 0 8 0 1 exome+100bp flanks 34834024 7 7 2.009530e-07 2.009530e-07 TCGA-E9-A226-01A-21D-A159-09 31 31 0 21 0 1 exome+100bp flanks 34834024 10 19 2.870756e-07 5.454437e-07 TCGA-E9-A227-01A-11D-A159-09 14 12 2 10 1.428571e-01 1 exome+100bp flanks 34834024 2 10 5.741513e-08 2.870756e-07 TCGA-E9-A228-01A-31D-A159-09 42 40 2 28 4.761905e-02 1 exome+100bp flanks 34834024 11 27 3.157832e-07 7.751042e-07 TCGA-E9-A229-01A-31D-A17G-09 21 21 0 13 0 1 exome+100bp flanks 34834024 6 12 1.722454e-07 3.444908e-07 TCGA-E9-A22A-01A-11D-A159-09 29 29 0 23 0 1 exome+100bp flanks 34834024 6 21 1.722454e-07 6.028589e-07 TCGA-E9-A22B-01A-11D-A159-09 52 50 2 38 3.846154e-02 1 exome+100bp flanks 34834024 11 36 3.157832e-07 1.033472e-06 TCGA-E9-A22D-01A-11D-A159-09 19 18 1 12 5.263158e-02 1 exome+100bp flanks 34834024 4 12 1.148303e-07 3.444908e-07 TCGA-E9-A22E-01A-11D-A159-09 85 79 6 64 7.058824e-02 1 exome+100bp flanks 34834024 14 56 4.019059e-07 1.607624e-06 TCGA-E9-A22G-01A-11D-A159-09 101 95 6 72 5.940594e-02 1 exome+100bp flanks 34834024 19 64 5.454437e-07 1.837284e-06 TCGA-E9-A22H-01A-11D-A159-09 19 18 1 18 5.263158e-02 1 exome+100bp flanks 34834024 0 15 0 4.306135e-07 TCGA-E9-A243-01A-21D-A167-09 61 57 4 46 6.557377e-02 1 exome+100bp flanks 34834024 10 42 2.870756e-07 1.205718e-06 TCGA-E9-A244-01A-11D-A167-09 87 82 5 60 5.747126e-02 1 exome+100bp flanks 34834024 21 54 6.028589e-07 1.550208e-06 TCGA-E9-A245-01A-22D-A16D-09 18 17 1 12 5.555556e-02 1 exome+100bp flanks 34834024 4 12 1.148303e-07 3.444908e-07 TCGA-E9-A247-01A-11D-A167-09 33 31 2 26 6.060606e-02 1 exome+100bp flanks 34834024 5 23 1.435378e-07 6.602740e-07 TCGA-E9-A248-01A-11D-A167-09 16 16 0 14 0 1 exome+100bp flanks 34834024 2 13 5.741513e-08 3.731983e-07 TCGA-E9-A249-01A-11D-A167-09 16 15 1 10 6.250000e-02 1 exome+100bp flanks 34834024 5 10 1.435378e-07 2.870756e-07 TCGA-E9-A24A-01A-11D-A167-09 18 18 0 18 0 1 exome+100bp flanks 34834024 0 17 0 4.880286e-07 TCGA-E9-A295-01A-11D-A16D-09 68 67 1 54 1.470588e-02 1 exome+100bp flanks 34834024 13 53 3.731983e-07 1.521501e-06 TCGA-E9-A2JS-01A-11D-A17W-09 76 64 12 46 1.578947e-01 1 exome+100bp flanks 34834024 18 44 5.167362e-07 1.263133e-06 TCGA-E9-A2JT-01A-22D-A18P-09 7 6 1 4 1.428571e-01 1 exome+100bp flanks 34834024 1 3 2.870756e-08 8.612269e-08 TCGA-E9-A3HO-01A-11D-A20S-09 74 64 10 56 1.351351e-01 1 exome+100bp flanks 34834024 6 51 1.722454e-07 1.464086e-06 TCGA-E9-A3Q9-01A-11D-A21Q-09 72 41 31 34 4.305556e-01 1 exome+100bp flanks 34834024 7 30 2.009530e-07 8.612269e-07 TCGA-E9-A3QA-01A-61D-A228-09 68 61 7 47 1.029412e-01 1 exome+100bp flanks 34834024 14 43 4.019059e-07 1.234425e-06 TCGA-E9-A3X8-01A-31D-A22X-09 20 18 2 13 1.000000e-01 1 exome+100bp flanks 34834024 5 13 1.435378e-07 3.731983e-07 TCGA-E9-A54X-01A-11D-A25Q-09 38 29 9 23 2.368421e-01 1 exome+100bp flanks 34834024 6 20 1.722454e-07 5.741513e-07 TCGA-E9-A54Y-01A-11D-A25Q-09 51 41 10 30 1.960784e-01 1 exome+100bp flanks 34834024 10 28 2.870756e-07 8.038118e-07 TCGA-E9-A5FK-01A-11D-A27P-09 18 16 2 13 1.111111e-01 1 exome+100bp flanks 34834024 3 11 8.612269e-08 3.157832e-07 TCGA-E9-A5FL-01A-11D-A27P-09 97 79 18 67 1.855670e-01 1 exome+100bp flanks 34834024 12 64 3.444908e-07 1.837284e-06 TCGA-E9-A5UO-01A-11D-A28B-09 38 33 5 27 1.315789e-01 1 exome+100bp flanks 34834024 5 22 1.435378e-07 6.315664e-07 TCGA-E9-A5UP-01A-11D-A28B-09 39 29 10 22 2.564103e-01 1 exome+100bp flanks 34834024 5 19 1.435378e-07 5.454437e-07 TCGA-EW-A1IW-01A-11D-A13L-09 82 78 4 55 4.878049e-02 1 exome+100bp flanks 34834024 23 50 6.602740e-07 1.435378e-06 TCGA-EW-A1IX-01A-12D-A142-09 21 18 3 16 1.428571e-01 1 exome+100bp flanks 34834024 1 13 2.870756e-08 3.731983e-07 TCGA-EW-A1IY-01A-11D-A188-09 26 25 1 18 3.846154e-02 1 exome+100bp flanks 34834024 7 17 2.009530e-07 4.880286e-07 TCGA-EW-A1IZ-01A-11D-A188-09 321 308 13 226 4.049844e-02 1 exome+100bp flanks 34834024 79 203 2.267898e-06 5.827636e-06 TCGA-EW-A1J1-01A-11D-A188-09 21 20 1 12 4.761905e-02 1 exome+100bp flanks 34834024 7 11 2.009530e-07 3.157832e-07 TCGA-EW-A1J2-01A-21D-A13L-09 29 28 1 22 3.448276e-02 1 exome+100bp flanks 34834024 6 22 1.722454e-07 6.315664e-07 TCGA-EW-A1J3-01A-11D-A13L-09 27 26 1 21 3.703704e-02 1 exome+100bp flanks 34834024 5 20 1.435378e-07 5.741513e-07 TCGA-EW-A1J5-01A-11D-A13L-09 413 398 15 294 3.631961e-02 1 exome+100bp flanks 34834024 97 275 2.784634e-06 7.894580e-06 TCGA-EW-A1J6-01A-11D-A188-09 42 41 1 28 2.380952e-02 1 exome+100bp flanks 34834024 11 27 3.157832e-07 7.751042e-07 TCGA-EW-A1OV-01A-11D-A142-09 92 88 4 67 4.347826e-02 1 exome+100bp flanks 34834024 20 61 5.741513e-07 1.751161e-06 TCGA-EW-A1OX-01A-11D-A142-09 24 21 3 14 1.250000e-01 1 exome+100bp flanks 34834024 5 12 1.435378e-07 3.444908e-07 TCGA-EW-A1OY-01A-11D-A142-09 62 60 2 49 3.225806e-02 1 exome+100bp flanks 34834024 10 43 2.870756e-07 1.234425e-06 TCGA-EW-A1OZ-01A-11D-A142-09 51 47 4 38 7.843137e-02 1 exome+100bp flanks 34834024 8 35 2.296605e-07 1.004765e-06 TCGA-EW-A1P0-01A-11D-A142-09 24 23 1 18 4.166667e-02 1 exome+100bp flanks 34834024 5 17 1.435378e-07 4.880286e-07 TCGA-EW-A1P1-01A-31D-A14G-09 3 2 1 1 3.333333e-01 1 exome+100bp flanks 34834024 1 0 2.870756e-08 0 TCGA-EW-A1P3-01A-11D-A142-09 13 13 0 11 0 1 exome+100bp flanks 34834024 2 10 5.741513e-08 2.870756e-07 TCGA-EW-A1P4-01A-21D-A142-09 59 56 3 43 5.084746e-02 1 exome+100bp flanks 34834024 11 37 3.157832e-07 1.062180e-06 TCGA-EW-A1P5-01A-11D-A142-09 18 17 1 13 5.555556e-02 1 exome+100bp flanks 34834024 4 13 1.148303e-07 3.731983e-07 TCGA-EW-A1P6-01A-11D-A142-09 22 19 3 17 1.363636e-01 1 exome+100bp flanks 34834024 2 17 5.741513e-08 4.880286e-07 TCGA-EW-A1P7-01A-21D-A142-09 8 7 1 5 1.250000e-01 1 exome+100bp flanks 34834024 2 5 5.741513e-08 1.435378e-07 TCGA-EW-A1P8-01A-11D-A142-09 39 37 2 27 5.128205e-02 1 exome+100bp flanks 34834024 9 24 2.583681e-07 6.889816e-07 TCGA-EW-A1PA-01A-11D-A142-09 35 33 2 24 5.714286e-02 1 exome+100bp flanks 34834024 9 24 2.583681e-07 6.889816e-07 TCGA-EW-A1PB-01A-11D-A142-09 138 130 8 100 5.797101e-02 1 exome+100bp flanks 34834024 29 96 8.325194e-07 2.755926e-06 TCGA-EW-A1PC-01B-11D-A21Q-09 149 118 31 89 2.080537e-01 1 exome+100bp flanks 34834024 25 75 7.176891e-07 2.153067e-06 TCGA-EW-A1PD-01A-11D-A142-09 70 68 2 56 2.857143e-02 1 exome+100bp flanks 34834024 12 48 3.444908e-07 1.377963e-06 TCGA-EW-A1PE-01A-11D-A142-09 35 30 5 24 1.428571e-01 1 exome+100bp flanks 34834024 6 22 1.722454e-07 6.315664e-07 TCGA-EW-A1PG-01A-11D-A142-09 6 6 0 5 0 1 exome+100bp flanks 34834024 1 5 2.870756e-08 1.435378e-07 TCGA-EW-A1PH-01A-11D-A14K-09 43 40 3 33 6.976744e-02 1 exome+100bp flanks 34834024 7 32 2.009530e-07 9.186421e-07 TCGA-EW-A2FR-01A-11D-A21Q-09 55 46 9 40 1.636364e-01 1 exome+100bp flanks 34834024 6 38 1.722454e-07 1.090887e-06 TCGA-EW-A2FS-01A-11D-A17D-09 28 28 0 18 0 1 exome+100bp flanks 34834024 10 15 2.870756e-07 4.306135e-07 TCGA-EW-A2FV-01A-11D-A17D-09 22 19 3 16 1.363636e-01 1 exome+100bp flanks 34834024 3 16 8.612269e-08 4.593210e-07 TCGA-EW-A2FW-01A-11D-A17D-09 20 19 1 17 5.000000e-02 1 exome+100bp flanks 34834024 2 17 5.741513e-08 4.880286e-07 TCGA-EW-A3E8-01B-11D-A243-09 101 85 16 66 1.584158e-01 1 exome+100bp flanks 34834024 19 61 5.454437e-07 1.751161e-06 TCGA-EW-A3U0-01A-11D-A228-09 146 125 21 95 1.438356e-01 1 exome+100bp flanks 34834024 27 87 7.751042e-07 2.497558e-06 TCGA-EW-A423-01A-11D-A243-09 70 59 11 38 1.571429e-01 1 exome+100bp flanks 34834024 18 36 5.167362e-07 1.033472e-06 TCGA-GI-A2C8-01A-11D-A16D-09 108 105 3 81 2.777778e-02 0 coding only 34834024 21 77 6.028589e-07 2.210482e-06 TCGA-GI-A2C9-01A-11D-A21Q-09 160 128 32 99 2.000000e-01 1 exome+100bp flanks 34834024 28 91 8.038118e-07 2.612388e-06 TCGA-GM-A2D9-01A-11D-A18P-09 395 377 18 278 4.556962e-02 1 exome+100bp flanks 34834024 96 254 2.755926e-06 7.291721e-06 TCGA-GM-A2DA-01A-11D-A18P-09 33 30 3 20 9.090909e-02 1 exome+100bp flanks 34834024 9 17 2.583681e-07 4.880286e-07 TCGA-GM-A2DB-01A-31D-A19Y-09 96 91 5 81 5.208333e-02 1 exome+100bp flanks 34834024 10 74 2.870756e-07 2.124360e-06 TCGA-GM-A2DC-01A-11D-A18P-09 20 19 1 14 5.000000e-02 1 exome+100bp flanks 34834024 4 12 1.148303e-07 3.444908e-07 TCGA-GM-A2DD-01A-11D-A17W-09 47 43 4 35 8.510638e-02 1 exome+100bp flanks 34834024 7 33 2.009530e-07 9.473496e-07 TCGA-GM-A2DF-01A-11D-A17W-09 34 30 4 22 1.176471e-01 1 exome+100bp flanks 34834024 7 21 2.009530e-07 6.028589e-07 TCGA-GM-A2DH-01A-11D-A17W-09 119 113 6 92 5.042017e-02 1 exome+100bp flanks 34834024 21 78 6.028589e-07 2.239190e-06 TCGA-GM-A2DI-01A-31D-A18P-09 26 26 0 20 0 1 exome+100bp flanks 34834024 6 20 1.722454e-07 5.741513e-07 TCGA-GM-A2DK-01A-21D-A17W-09 24 22 2 14 8.333333e-02 1 exome+100bp flanks 34834024 6 13 1.722454e-07 3.731983e-07 TCGA-GM-A2DL-01A-11D-A18P-09 43 42 1 37 2.325581e-02 1 exome+100bp flanks 34834024 5 34 1.435378e-07 9.760572e-07 TCGA-GM-A2DM-01A-11D-A17W-09 20 19 1 18 5.000000e-02 1 exome+100bp flanks 34834024 1 17 2.870756e-08 4.880286e-07 TCGA-GM-A2DN-01A-11D-A17W-09 21 20 1 17 4.761905e-02 1 exome+100bp flanks 34834024 3 17 8.612269e-08 4.880286e-07 TCGA-GM-A2DO-01A-11D-A19Y-09 93 93 0 65 0 1 exome+100bp flanks 34834024 25 62 7.176891e-07 1.779869e-06 TCGA-GM-A3NW-01A-21D-A228-09 92 80 12 59 1.304348e-01 1 exome+100bp flanks 34834024 17 55 4.880286e-07 1.578916e-06 TCGA-GM-A3NY-01A-11D-A21Q-09 124 61 63 48 5.080645e-01 2 all capture (no interval list) 65505363 11 41 1.679252e-07 6.259030e-07 TCGA-GM-A3XG-01A-31D-A243-09 8 6 2 5 2.500000e-01 1 exome+100bp flanks 34834024 0 4 0 1.148303e-07 TCGA-GM-A3XL-01A-11D-A22X-09 95 80 15 66 1.578947e-01 1 exome+100bp flanks 34834024 13 57 3.731983e-07 1.636331e-06 TCGA-GM-A3XN-01A-12D-A22X-09 26 19 7 14 2.692308e-01 1 exome+100bp flanks 34834024 5 12 1.435378e-07 3.444908e-07 TCGA-GM-A4E0-01A-12D-A25Q-09 28 23 5 16 1.785714e-01 1 exome+100bp flanks 34834024 5 14 1.435378e-07 4.019059e-07 TCGA-GM-A5PV-01A-11D-A28B-09 26 21 5 16 1.923077e-01 1 exome+100bp flanks 34834024 5 15 1.435378e-07 4.306135e-07 TCGA-GM-A5PX-01A-12D-A28B-09 33 29 4 21 1.212121e-01 1 exome+100bp flanks 34834024 8 17 2.296605e-07 4.880286e-07 TCGA-HN-A2NL-01A-11D-A18P-09 71 68 3 55 4.225352e-02 1 exome+100bp flanks 34834024 12 52 3.444908e-07 1.492793e-06 TCGA-HN-A2OB-01A-21D-A27P-09 12 10 2 9 1.666667e-01 1 exome+100bp flanks 34834024 1 9 2.870756e-08 2.583681e-07 TCGA-JL-A3YW-01A-12D-A23C-09 98 82 16 66 1.632653e-01 1 exome+100bp flanks 34834024 14 59 4.019059e-07 1.693746e-06 TCGA-JL-A3YX-01A-11D-A22X-09 41 33 8 27 1.951220e-01 1 exome+100bp flanks 34834024 6 24 1.722454e-07 6.889816e-07 TCGA-LL-A440-01A-11D-A243-09 8 6 2 3 2.500000e-01 1 exome+100bp flanks 34834024 3 3 8.612269e-08 8.612269e-08 TCGA-LL-A441-01A-11D-A243-09 79 65 14 44 1.772152e-01 1 exome+100bp flanks 34834024 17 39 4.880286e-07 1.119595e-06 TCGA-LL-A50Y-01A-11D-A25Q-09 43 37 6 25 1.395349e-01 1 exome+100bp flanks 34834024 12 23 3.444908e-07 6.602740e-07 TCGA-LL-A5YL-01A-12D-A29N-09 78 69 9 51 1.153846e-01 1 exome+100bp flanks 34834024 17 45 4.880286e-07 1.291840e-06 TCGA-LL-A5YM-01A-11D-A28B-09 30 26 4 19 1.333333e-01 1 exome+100bp flanks 34834024 7 15 2.009530e-07 4.306135e-07 TCGA-LL-A5YN-01A-11D-A28B-09 28 25 3 23 1.071429e-01 1 exome+100bp flanks 34834024 2 20 5.741513e-08 5.741513e-07 TCGA-LL-A5YO-01A-21D-A28B-09 39 35 4 28 1.025641e-01 1 exome+100bp flanks 34834024 7 27 2.009530e-07 7.751042e-07 TCGA-LL-A5YP-01A-21D-A28B-09 94 75 19 60 2.021277e-01 1 exome+100bp flanks 34834024 14 56 4.019059e-07 1.607624e-06 TCGA-LQ-A4E4-01A-11D-A25Q-09 97 81 16 62 1.649485e-01 1 exome+100bp flanks 34834024 19 50 5.454437e-07 1.435378e-06 TCGA-MS-A51U-01A-31D-A25Q-09 19 16 3 12 1.578947e-01 1 exome+100bp flanks 34834024 4 12 1.148303e-07 3.444908e-07 TCGA-OK-A5Q2-01A-11D-A27P-09 32 27 5 22 1.562500e-01 1 exome+100bp flanks 34834024 5 21 1.435378e-07 6.028589e-07 TCGA-OL-A5D6-01A-21D-A27P-09 42 38 4 30 9.523810e-02 1 exome+100bp flanks 34834024 7 30 2.009530e-07 8.612269e-07 TCGA-OL-A5D7-01A-11D-A27P-09 59 50 9 38 1.525424e-01 1 exome+100bp flanks 34834024 11 34 3.157832e-07 9.760572e-07 TCGA-OL-A5D8-01A-11D-A27P-09 35 32 3 24 8.571429e-02 1 exome+100bp flanks 34834024 7 22 2.009530e-07 6.315664e-07 TCGA-OL-A5DA-01A-11D-A27P-09 65 59 6 42 9.230769e-02 1 exome+100bp flanks 34834024 16 38 4.593210e-07 1.090887e-06 TCGA-OL-A5RU-01A-11D-A28B-09 29 25 4 22 1.379310e-01 1 exome+100bp flanks 34834024 3 21 8.612269e-08 6.028589e-07 TCGA-OL-A5RV-01A-12D-A28B-09 16 13 3 11 1.875000e-01 1 exome+100bp flanks 34834024 2 11 5.741513e-08 3.157832e-07 TCGA-OL-A5RW-01A-11D-A28B-09 172 147 25 118 1.453488e-01 1 exome+100bp flanks 34834024 27 112 7.751042e-07 3.215247e-06 TCGA-OL-A5RX-01A-11D-A28B-09 30 26 4 20 1.333333e-01 1 exome+100bp flanks 34834024 6 18 1.722454e-07 5.167362e-07 TCGA-OL-A5RY-01A-21D-A28B-09 13 10 3 8 2.307692e-01 1 exome+100bp flanks 34834024 2 7 5.741513e-08 2.009530e-07 TCGA-OL-A5RZ-01A-11D-A28B-09 115 106 9 77 7.826087e-02 1 exome+100bp flanks 34834024 26 75 7.463967e-07 2.153067e-06 TCGA-OL-A5S0-01A-11D-A28B-09 43 37 6 31 1.395349e-01 1 exome+100bp flanks 34834024 5 28 1.435378e-07 8.038118e-07 TCGA-OL-A66H-01A-11D-A29N-09 26 23 3 17 1.153846e-01 1 exome+100bp flanks 34834024 6 13 1.722454e-07 3.731983e-07 TCGA-OL-A66I-01A-21D-A29N-09 39 34 5 24 1.282051e-01 1 exome+100bp flanks 34834024 10 24 2.870756e-07 6.889816e-07 TCGA-OL-A66J-01A-11D-A29N-09 62 52 10 43 1.612903e-01 1 exome+100bp flanks 34834024 9 40 2.583681e-07 1.148303e-06 TCGA-OL-A66K-01A-11D-A29N-09 32 29 3 20 9.375000e-02 1 exome+100bp flanks 34834024 8 19 2.296605e-07 5.454437e-07 TCGA-PE-A5DC-01A-12D-A27P-09 126 106 20 78 1.587302e-01 1 exome+100bp flanks 34834024 27 73 7.751042e-07 2.095652e-06 TCGA-PE-A5DD-01A-12D-A27P-09 65 55 10 41 1.538462e-01 1 exome+100bp flanks 34834024 14 37 4.019059e-07 1.062180e-06 TCGA-PE-A5DE-01A-11D-A27P-09 433 378 55 273 1.270208e-01 1 exome+100bp flanks 34834024 98 249 2.813341e-06 7.148184e-06