Clinical Features CN_CNMF METHLYATION_CNMF RPPA_CNMF RPPA_CHIERARCHICAL MRNASEQ_CNMF MRNASEQ_CHIERARCHICAL MIRSEQ_CNMF MIRSEQ_CHIERARCHICAL MIRSEQ_MATURE_CNMF MIRSEQ_MATURE_CHIERARCHICAL nMutated (%) nWild-Type Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q PBRM1 8 (23%) 27 0.10543 0.92 0.01263 0.281 0.8561 1 0.23181 1 0.30496 1 0.31434 1 0.84648 1 0.22348 1 1 1 0.35917 1 HLA-B 5 (14%) 30 1 1 0.01861 0.31 0.58333 1 0.43618 1 0.01311 0.281 0.18519 1 0.0070699 0.281 0.01831 0.31 0.63127 1 0.44297 1 MLL3 7 (20%) 28 0.20745 1 0.32602 1 0.32102 1 1 1 0.87222 1 0.97848 1 0.24361 1 0.73673 1 0.43009 1 0.61613 1 FTH1 3 (9%) 32 0.58197 1 0.10044 0.92 0.094949 0.92 0.5879 1 0.10223 0.92 0.22952 1 0.85061 1 0.65941 1 0.56455 1 1 1 TP53 5 (14%) 30 0.64181 1 1 1 0.51905 1 0.75578 1 1 1 0.9831 1 0.92302 1 0.85344 1 1 1 0.89449 1 ARID1A 5 (14%) 30 0.64181 1 0.60752 1 0.51783 1 0.20836 1 0.22504 1 0.6482 1 1 1 0.14809 1 0.63127 1 0.62424 1 DDHD1 4 (11%) 31 0.31199 1 1 1 0.46867 1 0.46455 1 0.33982 1 0.91387 1 0.59805 1 0.20523 1 0.2924 1 0.63783 1 MUC2 7 (20%) 28 0.41496 1 0.57536 1 0.28118 1 0.40126 1 0.27471 1 0.14987 1 0.68602 1 0.20221 1 0.43009 1 0.74295 1 IDH1 4 (11%) 31 1 1 0.00232 0.281 1 1 0.58429 1 0.071979 0.831 0.44614 1 0.0052699 0.281 0.04001 0.596 1 1 0.39 1 MUC21 3 (9%) 32 1 1 0.77061 1 NA NA NA NA 0.60445 1 0.04372 0.596 1 1 0.73569 1 0.56455 1 1 1 CLIP4 4 (11%) 31 1 1 0.65174 1 0.64973 1 0.88774 1 0.65471 1 0.91639 1 0.81086 1 0.152 1 1 1 0.89342 1 BAP1 6 (17%) 29 1 1 0.19495 1 0.75893 1 0.58834 1 0.62334 1 0.41076 1 0.71264 1 0.44392 1 1 1 0.40622 1 CDC27 5 (14%) 30 0.34683 1 0.83238 1 0.32163 1 0.066589 0.831 0.83445 1 0.42817 1 0.34776 1 0.1509 1 0.0092505 0.281 0.23137 1 FAM35A 3 (9%) 32 0.58197 1 1 1 NA NA NA NA 1 1 0.79263 1 0.68094 1 0.69453 1 1 1 0.01044 0.281 PAXIP1 4 (11%) 31 0.6081 1 1 1 1 1 0.77175 1 0.65095 1 0.2978 1 0.59831 1 0.47251 1 0.61898 1 0.11046 0.92