Clinical Features Time to Death YEARS_TO_BIRTH TUMOR_TISSUE_SITE GENDER RADIATION_THERAPY KARNOFSKY_PERFORMANCE_SCORE HISTOLOGICAL_TYPE RACE ETHNICITY nCNV (%) nWild-Type logrank test_P logrank test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 94 (9%) 989 1.1155e-09 1.79e-08 2.5411e-06 2.89e-05 1.4122e-12 2.74e-11 0.58468 0.729 0.078109 0.178 0.0017818 0.00726 9.9999e-06 7.31e-05 0.77443 0.87 0.57089 0.719 1q gain 111 (10%) 972 4.8339e-05 0.000281 3.9669e-06 4.07e-05 1.4714e-09 2.31e-08 0.36136 0.538 0.28955 0.478 0.0026787 0.0103 9.9999e-06 7.31e-05 0.37585 0.549 0.42415 0.588 2p gain 51 (5%) 1032 0.0035412 0.0131 0.024713 0.0707 0.0038382 0.014 0.19117 0.351 0.39386 0.561 0.083369 0.188 0.071239 0.167 0.5032 0.661 0.71644 0.84 2q gain 48 (4%) 1035 0.0048604 0.0172 0.014962 0.046 0.0046128 0.0165 0.37399 0.549 0.15974 0.312 0.054403 0.136 0.070309 0.166 0.34779 0.524 1 1 3p gain 66 (6%) 1017 2.3251e-05 0.000152 2.209e-06 2.55e-05 3.0647e-08 4.19e-07 0.30276 0.489 0.36449 0.541 0.24078 0.42 9.9999e-06 7.31e-05 1 1 0.50774 0.666 3q gain 70 (6%) 1013 1.4345e-06 1.74e-05 1.0447e-06 1.28e-05 8.5198e-11 1.5e-09 0.38086 0.554 0.057163 0.141 0.08237 0.186 9.9999e-06 7.31e-05 0.71981 0.84 0.51149 0.669 4p gain 47 (4%) 1036 0.036757 0.0994 0.25682 0.443 0.0025202 0.00978 0.76265 0.864 0.15974 0.312 0.30033 0.489 0.0064299 0.022 0.21442 0.387 0.7165 0.84 4q gain 40 (4%) 1043 0.0028374 0.0108 0.022876 0.0662 8.0991e-05 0.000436 0.51423 0.672 0.088519 0.196 0.81203 0.897 0.00182 0.00738 0.26189 0.446 0.41207 0.576 5p gain 60 (6%) 1023 5.4387e-05 0.000306 0.010795 0.0342 2.0084e-06 2.35e-05 0.28539 0.473 0.34762 0.524 0.92952 0.974 9.9999e-06 7.31e-05 0.41663 0.58 1 1 5q gain 50 (5%) 1033 3.9885e-05 0.000239 0.0011591 0.00486 1.5794e-05 0.00011 0.14332 0.284 0.86461 0.93 0.39837 0.564 0.00024 0.00119 0.20271 0.369 0.26034 0.445 6p gain 35 (3%) 1048 0.22025 0.395 0.78332 0.874 0.025614 0.073 0.86375 0.93 0.025789 0.0732 0.31678 0.502 0.096119 0.207 0.54981 0.706 0.63422 0.768 6q gain 28 (3%) 1055 0.19128 0.351 0.86086 0.929 0.0016855 0.00691 0.84817 0.921 0.11443 0.241 0.26691 0.451 0.03246 0.0897 0.48446 0.642 0.61912 0.756 7p gain 590 (54%) 493 0 0 1.8983e-54 8.76e-53 2.3954e-83 1.47e-81 0.62082 0.756 1.1873e-11 2.14e-10 5.2947e-13 1.12e-11 9.9999e-06 7.31e-05 0.00205 0.00818 0.029918 0.0833 7q gain 625 (58%) 458 0 0 2.235e-51 9.7e-50 5.8122e-70 3.06e-68 0.34961 0.524 1.0175e-10 1.75e-09 6.9895e-12 1.29e-10 9.9999e-06 7.31e-05 0.00094999 0.00415 0.0074821 0.0249 8p gain 101 (9%) 982 0.60459 0.744 0.69123 0.823 0.8345 0.912 0.83291 0.912 0.31652 0.502 0.34048 0.524 0.47567 0.633 0.30212 0.489 0.29082 0.478 8q gain 118 (11%) 965 0.17578 0.33 0.08767 0.195 0.55855 0.714 0.76699 0.866 0.16081 0.312 0.8319 0.912 0.25799 0.443 0.58759 0.73 0.12985 0.261 9p gain 64 (6%) 1019 0.0089225 0.0289 0.01242 0.039 0.00068811 0.00308 0.067007 0.16 0.12741 0.259 0.25414 0.441 0.00188 0.00758 0.38993 0.561 0.73475 0.854 9q gain 95 (9%) 988 0.0073704 0.0246 0.0067421 0.0227 4.9945e-06 4.86e-05 0.016286 0.0492 0.056813 0.141 0.15493 0.306 2e-05 0.000134 0.594 0.736 0.78398 0.874 10p gain 70 (6%) 1013 4.2869e-06 4.33e-05 5.4446e-12 1.03e-10 1.6607e-09 2.55e-08 0.90044 0.958 0.23785 0.416 0.0042524 0.0154 9.9999e-06 7.31e-05 0.56411 0.715 0.022069 0.0641 10q gain 12 (1%) 1071 0.83544 0.912 0.053404 0.134 0.078353 0.178 0.25478 0.441 0.30828 0.496 0.16345 0.313 0.0428 0.112 0.17245 0.327 0.086366 0.193 11p gain 50 (5%) 1033 0.052533 0.133 0.79468 0.884 0.0085092 0.0278 0.38043 0.554 0.12887 0.26 0.077818 0.178 0.01203 0.0379 0.34865 0.524 0.27109 0.455 11q gain 74 (7%) 1009 1.8666e-05 0.000128 0.013059 0.0405 4.5755e-09 6.89e-08 0.46532 0.627 0.12419 0.255 0.0076042 0.0252 9.9999e-06 7.31e-05 0.46754 0.628 0.22381 0.398 12p gain 93 (9%) 990 0.28469 0.473 0.57516 0.719 0.038561 0.103 0.91263 0.965 0.00030513 0.00149 0.74144 0.855 0.21436 0.387 0.90561 0.96 0.5722 0.719 12q gain 65 (6%) 1018 0.0022459 0.00882 0.13782 0.275 0.00046395 0.00215 0.89691 0.955 0.0095286 0.0306 0.18377 0.342 0.01001 0.0318 0.11896 0.247 0.16813 0.32 13q gain 17 (2%) 1066 0.26938 0.453 0.072726 0.17 0.63518 0.768 0.45804 0.624 0.069628 0.165 0.01975 0.0583 0.8097 0.897 1 1 1 1 14q gain 26 (2%) 1057 0.00050745 0.00233 0.00032998 0.00158 0.0010422 0.00447 0.31569 0.502 0.47544 0.633 0.17705 0.331 0.0061699 0.0213 1 1 0.62398 0.759 15q gain 36 (3%) 1047 0.012839 0.0401 0.046286 0.119 0.092606 0.203 0.73452 0.854 0.69811 0.828 0.0025313 0.00978 0.25941 0.444 1 1 0.39364 0.561 16p gain 54 (5%) 1029 0.61216 0.749 0.054618 0.136 0.0078265 0.0257 0.25719 0.443 0.04886 0.124 0.34776 0.524 0.04228 0.111 0.34658 0.524 0.16218 0.312 16q gain 56 (5%) 1027 0.44842 0.615 0.39258 0.561 0.05347 0.134 0.48847 0.645 0.077146 0.177 0.60593 0.744 0.02322 0.0669 0.39624 0.563 0.16256 0.312 17p gain 71 (7%) 1012 3.1284e-05 0.000192 1.3706e-05 9.73e-05 0.0020172 0.00809 0.034259 0.094 1 1 0.74375 0.855 0.00426 0.0154 0.42031 0.584 0.76245 0.864 17q gain 85 (8%) 998 6.6529e-07 8.32e-06 1.1459e-05 8.21e-05 0.00062524 0.00283 0.10823 0.23 0.69261 0.823 0.65024 0.783 0.0058499 0.0205 0.71538 0.84 0.77042 0.868 18p gain 77 (7%) 1006 4.4844e-05 0.000263 0.0203 0.0592 8.3115e-05 0.000444 0.71933 0.84 0.33415 0.517 0.028393 0.08 0.00034 0.00161 0.65664 0.788 0.76273 0.864 18q gain 74 (7%) 1009 1.6314e-05 0.000113 0.0021336 0.00842 3.1066e-06 3.32e-05 0.46532 0.627 0.048383 0.124 0.037433 0.1 2e-05 0.000134 0.50155 0.661 0.35569 0.531 19p gain 320 (30%) 763 1.1131e-05 8.05e-05 3.1567e-07 4.09e-06 1.0754e-12 2.15e-11 0.54421 0.702 0.082765 0.187 0.024576 0.0706 9.9999e-06 7.31e-05 0.12845 0.26 0.31129 0.497 19q gain 221 (20%) 862 0 0 2.1558e-16 5.3e-15 1.2527e-34 4.62e-33 0.5413 0.7 2.7436e-06 3.07e-05 4.1666e-05 0.000246 9.9999e-06 7.31e-05 0.01303 0.0405 1 1 20p gain 264 (24%) 819 0 0 6.1467e-28 1.97e-26 1.8572e-32 6.53e-31 0.71984 0.84 2.5015e-05 0.000161 2.7019e-05 0.00017 9.9999e-06 7.31e-05 0.083609 0.188 0.10565 0.226 20q gain 261 (24%) 822 0 0 1.292e-26 3.97e-25 2.1727e-32 7.29e-31 0.47203 0.632 1.5849e-05 0.00011 8.814e-06 7.31e-05 9.9999e-06 7.31e-05 0.075599 0.174 0.1058 0.226 21q gain 87 (8%) 996 0.0055469 0.0195 1.5937e-06 1.9e-05 0.00012148 0.000623 0.90995 0.963 0.01755 0.0524 0.15593 0.307 0.00162 0.00668 0.092749 0.203 0.043966 0.115 22q gain 55 (5%) 1028 0.32076 0.505 0.11087 0.234 0.48862 0.645 1 1 0.626 0.76 0.036524 0.0991 0.01633 0.0492 0.9178 0.966 0.057697 0.142 xp gain 35 (3%) 1048 0.18225 0.34 0.17677 0.331 0.30181 0.489 0.16253 0.312 0.22594 0.4 0.23773 0.416 0.15868 0.311 0.54914 0.706 0.31804 0.502 xq gain 58 (5%) 1025 0.0065451 0.0223 0.00033208 0.00158 0.00035673 0.00168 0.07483 0.173 0.74745 0.857 0.035968 0.0983 5.9999e-05 0.000333 0.72072 0.84 0.00094829 0.00415 1p loss 198 (18%) 885 0 0 5.3339e-05 0.000303 3.4878e-50 1.43e-48 0.42547 0.589 2.2854e-18 6.02e-17 5.0027e-06 4.86e-05 9.9999e-06 7.31e-05 0.088929 0.196 0.17327 0.328 1q loss 43 (4%) 1040 0.12678 0.258 0.37355 0.549 0.0077736 0.0256 0.34745 0.524 0.35816 0.534 0.2736 0.458 0.00126 0.00525 0.79635 0.884 1 1 2p loss 54 (5%) 1029 0.17366 0.328 0.063232 0.153 0.33223 0.516 0.32625 0.51 0.41021 0.575 0.33565 0.518 0.44978 0.616 0.60105 0.742 0.26706 0.451 2q loss 52 (5%) 1031 0.19485 0.356 0.19122 0.351 0.11928 0.247 0.38775 0.56 0.73788 0.855 0.34421 0.524 0.064479 0.155 0.64123 0.773 0.26347 0.447 3p loss 71 (7%) 1012 0.39956 0.565 0.34855 0.524 0.39246 0.561 0.53622 0.698 0.019965 0.0587 0.028864 0.0807 0.85949 0.929 0.82074 0.904 0.20662 0.375 3q loss 64 (6%) 1019 0.34993 0.524 0.89092 0.95 0.797 0.884 1 1 0.088029 0.195 0.34411 0.524 0.99515 1 0.53763 0.699 0.7407 0.855 4p loss 126 (12%) 957 0.046485 0.12 0.70523 0.834 0.036482 0.0991 0.016259 0.0492 0.30938 0.496 0.90229 0.958 0.00033 0.00158 0.43917 0.605 0.47161 0.632 4q loss 150 (14%) 933 5.2732e-05 0.000302 0.033639 0.0926 0.00010246 0.000536 0.32797 0.512 0.07468 0.173 0.41621 0.58 0.00011 0.000568 0.74667 0.857 0.65329 0.785 5p loss 79 (7%) 1004 0.41005 0.575 0.85723 0.928 0.64023 0.773 1 1 0.0020854 0.00827 0.18793 0.348 0.062119 0.151 0.46076 0.625 0.76372 0.864 5q loss 78 (7%) 1005 0.94931 0.991 0.77436 0.87 0.41035 0.575 0.55416 0.71 0.0010614 0.00453 0.37495 0.549 0.12885 0.26 0.83795 0.912 0.54885 0.706 6p loss 116 (11%) 967 6.1751e-13 1.27e-11 5.5294e-05 0.000309 2.8286e-06 3.12e-05 0.76569 0.865 0.28955 0.478 0.052899 0.133 7.9999e-05 0.000434 0.04109 0.109 0.31018 0.497 6q loss 187 (17%) 896 1.8645e-08 2.65e-07 0.00089337 0.00395 5.2264e-05 0.000301 0.22133 0.396 0.068324 0.163 0.0043021 0.0155 3e-05 0.000188 0.01655 0.0496 0.09505 0.206 7p loss 10 (1%) 1073 0.5636 0.715 0.13631 0.273 0.3488 0.524 0.7496 0.858 0.46309 0.627 0.83462 0.912 0.77881 0.872 0.60279 0.743 1 1 7q loss 9 (1%) 1074 0.92416 0.971 0.092771 0.203 1 1 0.74224 0.855 0.68734 0.821 0.20491 0.372 0.74404 0.855 0.56812 0.719 1 1 8p loss 74 (7%) 1009 8.8641e-05 0.000471 0.00013546 0.00068 3.1066e-06 3.32e-05 0.3302 0.514 0.0059992 0.0208 0.43734 0.603 0.00016 0.000798 0.0058799 0.0205 0.76259 0.864 8q loss 52 (5%) 1031 4.8861e-06 4.86e-05 0.00029823 0.00147 9.1564e-05 0.000483 0.38775 0.56 0.016028 0.0489 0.77812 0.872 0.0051599 0.0182 0.16512 0.316 1 1 9p loss 315 (29%) 768 3.0558e-05 0.00019 0.00010328 0.000537 2.3185e-05 0.000152 0.94601 0.989 0.00061856 0.00282 0.041686 0.11 7.9999e-05 0.000434 0.11927 0.247 0.060289 0.147 9q loss 142 (13%) 941 0.003532 0.0131 0.0029835 0.0113 0.0067796 0.0227 0.78443 0.874 0.00068826 0.00308 0.0011296 0.00476 0.062849 0.153 0.03861 0.103 0.25754 0.443 10p loss 557 (51%) 526 0 0 4.5588e-74 2.59e-72 5.1798e-116 3.82e-114 0.084279 0.188 1.9477e-15 4.64e-14 6.5392e-19 1.86e-17 9.9999e-06 7.31e-05 0.00286 0.0109 0.0030021 0.0113 10q loss 585 (54%) 498 0 0 4.6344e-68 2.28e-66 3.1232e-115 2.1e-113 0.17416 0.328 1.368e-18 3.74e-17 1.6529e-20 4.88e-19 9.9999e-06 7.31e-05 0.00344 0.0128 0.00095802 0.00416 11p loss 163 (15%) 920 0.12028 0.248 0.93507 0.979 0.027094 0.0766 0.030992 0.086 0.0088476 0.0288 0.71814 0.84 0.00032 0.00155 0.57623 0.72 0.3843 0.557 11q loss 113 (10%) 970 1.0737e-09 1.76e-08 5.4275e-06 5.2e-05 1.3442e-10 2.25e-09 0.76254 0.864 0.018584 0.0551 0.044838 0.117 9.9999e-06 7.31e-05 1 1 0.11734 0.245 12p loss 86 (8%) 997 0.0095508 0.0306 0.1076 0.23 0.0047485 0.0169 0.56931 0.719 0.23544 0.414 0.47447 0.633 0.01562 0.0478 0.18681 0.346 0.57089 0.719 12q loss 109 (10%) 974 0.92522 0.971 0.87248 0.935 0.83978 0.913 0.53909 0.699 0.72006 0.84 0.68831 0.821 0.0177 0.0527 0.03991 0.106 0.61237 0.749 13q loss 297 (27%) 786 0.0030121 0.0113 0.057875 0.142 0.00012911 0.000653 0.30025 0.489 0.020255 0.0592 0.1102 0.233 0.00362 0.0133 0.5414 0.7 0.22428 0.398 14q loss 224 (21%) 859 2.6849e-05 0.00017 3.7096e-05 0.000224 6.4273e-05 0.000354 0.59529 0.736 0.2904 0.478 0.028693 0.0805 0.00109 0.00462 0.050569 0.128 0.080279 0.182 15q loss 156 (14%) 927 0.0023756 0.00928 0.00012486 0.000636 4.172e-05 0.000246 1 1 0.83688 0.912 0.2291 0.404 0.00097999 0.00423 0.91741 0.966 1 1 16p loss 78 (7%) 1005 4.2851e-07 5.45e-06 3.845e-06 4e-05 1.2148e-07 1.63e-06 0.47473 0.633 0.16133 0.312 0.40687 0.573 9.9999e-06 7.31e-05 0.88831 0.949 1 1 16q loss 104 (10%) 979 1.4363e-07 1.89e-06 2.4513e-05 0.000159 1.2033e-08 1.74e-07 1 1 0.037043 0.0998 0.12531 0.256 9.9999e-06 7.31e-05 0.26311 0.447 1 1 17p loss 75 (7%) 1008 2.093e-05 0.000139 0.0003912 0.00183 2.922e-08 4.07e-07 0.39653 0.563 0.16137 0.312 0.0066866 0.0226 9.9999e-06 7.31e-05 1 1 0.5356 0.698 17q loss 49 (5%) 1034 3.3407e-05 0.000204 0.00084757 0.00377 5.8638e-06 5.55e-05 0.65889 0.789 0.39214 0.561 0.069104 0.164 0.00047 0.00217 0.91622 0.966 0.44073 0.606 18p loss 137 (13%) 946 0.37407 0.549 0.094192 0.204 0.85493 0.926 0.1386 0.276 0.58622 0.73 0.46012 0.625 0.40322 0.569 0.21762 0.392 1 1 18q loss 123 (11%) 960 0.15158 0.3 0.45494 0.621 0.50224 0.661 0.56063 0.715 0.30633 0.494 0.57344 0.719 0.13758 0.275 0.16634 0.317 0.33439 0.517 19p loss 57 (5%) 1026 0.29724 0.487 0.22804 0.403 0.2788 0.466 0.68012 0.813 0.86958 0.933 0.11805 0.246 0.74167 0.855 0.39262 0.561 0.28038 0.467 19q loss 244 (23%) 839 0 0 1.1694e-08 1.73e-07 5.6094e-46 2.18e-44 0.30233 0.489 1.0533e-13 2.29e-12 3.5324e-06 3.72e-05 9.9999e-06 7.31e-05 0.48376 0.642 0.0095986 0.0307 20p loss 26 (2%) 1057 0.31854 0.502 0.75313 0.86 0.045471 0.118 0.10878 0.231 0.11471 0.241 0.55887 0.714 0.25449 0.441 0.066709 0.16 0.30072 0.489 20q loss 21 (2%) 1062 0.22093 0.396 0.3734 0.549 0.013233 0.0409 0.073326 0.171 0.61937 0.756 0.81813 0.903 0.073089 0.171 0.3699 0.548 0.59229 0.735 21q loss 79 (7%) 1004 0.99767 1 0.26834 0.452 1 1 0.34561 0.524 0.32365 0.507 0.81104 0.897 0.064589 0.155 0.70505 0.834 0.56381 0.715 22q loss 240 (22%) 843 1.5099e-14 3.48e-13 4.6976e-14 1.05e-12 4.1379e-17 1.05e-15 1 1 0.001329 0.00551 0.0063984 0.022 9.9999e-06 7.31e-05 0.42774 0.591 0.19499 0.356 xp loss 212 (20%) 871 0.83548 0.912 0.37162 0.549 0.87824 0.939 0.3139 0.5 0.46474 0.627 0.38321 0.557 0.95603 0.997 0.57271 0.719 0.12062 0.248 xq loss 174 (16%) 909 0.093907 0.204 0.22347 0.398 0.046654 0.12 0.86679 0.931 0.32256 0.506 0.097208 0.209 0.3492 0.524 0.4541 0.621 1 1