Clinical Features	Time to Death		YEARS_TO_BIRTH		PATHOLOGIC_STAGE		PATHOLOGY_T_STAGE		PATHOLOGY_N_STAGE		PATHOLOGY_M_STAGE		GENDER		KARNOFSKY_PERFORMANCE_SCORE		NUMBER_PACK_YEARS_SMOKED		YEAR_OF_TOBACCO_SMOKING_ONSET		RACE		ETHNICITY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
amp_1q24.1	62 (12%)	466	0.019597	0.147	0.080323	0.318	0.11574	0.393	0.096139	0.346	0.062448	0.274	0.19358	0.534	0.57542	0.929	0.42636	0.822	NA	NA	NA	NA	0.53266	0.927	0.51996	0.922
amp_1q32.1	62 (12%)	466	0.064959	0.278	0.021053	0.152	0.082889	0.321	0.081479	0.319	0.46221	0.853	0.35177	0.772	0.57542	0.929	0.42636	0.822	NA	NA	NA	NA	0.53279	0.927	0.20016	0.538
amp_3q26.32	87 (16%)	441	0.11826	0.396	0.99108	1	5e-05	0.00129	0.00011	0.00247	0.051595	0.248	0.0004143	0.00648	0.90268	1	0.75901	1	1	1	NA	NA	0.56908	0.927	1	1
amp_4q32.1	16 (3%)	512	0.23901	0.588	0.29762	0.692	0.64091	0.958	0.39519	0.796	0.54518	0.927	0.72639	1	0.59778	0.936	0.035182	0.204	NA	NA	NA	NA	1	1	1	1
amp_5q35.1	332 (63%)	196	0.031836	0.198	0.18339	0.532	0.32907	0.732	0.2388	0.588	0.19245	0.534	0.30578	0.692	0.048444	0.239	0.69736	1	0.15549	0.474	0.46961	0.858	0.0021	0.0222	1	1
amp_7q36.3	176 (33%)	352	0.73413	1	0.55963	0.927	0.0122	0.108	0.04418	0.221	0.30573	0.692	0.0039087	0.0402	0.012485	0.108	0.30459	0.692	0.15437	0.474	0.063525	0.276	0.070389	0.288	0.26987	0.652
amp_8q24.22	79 (15%)	449	0.02502	0.167	0.0069204	0.0692	0.00062999	0.00866	0.00050999	0.00734	0.72817	1	0.057804	0.262	0.074659	0.299	0.55891	0.927	0.79995	1	NA	NA	0.25632	0.623	0.22947	0.582
amp_10p14	20 (4%)	508	0.7775	1	0.04243	0.221	0.18461	0.532	0.02946	0.186	0.19079	0.534	0.53648	0.927	0.64308	0.958	0.36227	0.775	NA	NA	NA	NA	0.38029	0.781	1	1
amp_xp22.2	31 (6%)	497	0.67979	0.993	0.82151	1	0.02204	0.156	0.055509	0.256	1	1	0.11563	0.393	1	1	0.94259	1	NA	NA	NA	NA	0.050719	0.247	0.61494	0.95
amp_xp11.4	33 (6%)	495	0.70928	1	0.97597	1	0.018	0.138	0.069669	0.288	1	1	0.043379	0.221	0.85248	1	0.94259	1	NA	NA	NA	NA	0.097759	0.347	0.38167	0.781
amp_xq11.2	29 (5%)	499	0.62108	0.951	0.29703	0.692	0.28444	0.682	0.34783	0.768	1	1	0.41066	0.808	1	1	0.5581	0.927	NA	NA	NA	NA	0.090469	0.336	0.61214	0.95
amp_xq28	37 (7%)	491	0.5886	0.929	0.50372	0.898	0.45702	0.853	0.64178	0.958	1	1	0.21107	0.553	0.8592	1	0.5581	0.927	NA	NA	NA	NA	1	1	0.39416	0.796
del_1p36.23	103 (20%)	425	0.021163	0.152	0.14176	0.451	0.29982	0.692	0.10062	0.348	0.76636	1	0.21811	0.557	0.2078	0.553	0.49611	0.889	0.91926	1	NA	NA	0.95225	1	0.21489	0.553
del_1p31.1	77 (15%)	451	0.24029	0.588	0.17646	0.517	0.5544	0.927	0.03975	0.214	0.30047	0.692	0.73044	1	0.054444	0.255	0.92936	1	NA	NA	NA	NA	0.60539	0.943	0.091553	0.336
del_1q43	42 (8%)	486	0.96902	1	0.54523	0.927	0.97888	1	0.14612	0.457	1	1	0.65699	0.965	1	1	0.68422	0.993	NA	NA	NA	NA	0.70843	1	0.7227	1
del_2q37.3	50 (9%)	478	0.85513	1	0.7175	1	0.44543	0.844	0.6844	0.993	1	1	0.40327	0.802	0.16258	0.492	NA	NA	NA	NA	NA	NA	0.75973	1	0.49249	0.886
del_3p26.3	455 (86%)	73	0.47951	0.867	0.46551	0.855	0.13624	0.442	0.0092199	0.0897	0.71839	1	0.8559	1	0.79421	1	0.32946	0.732	0.80272	1	NA	NA	0.00037	0.00605	0.39752	0.796
del_3p22.2	465 (88%)	63	0.63638	0.958	0.5297	0.927	0.01696	0.138	0.00037	0.00605	1	1	0.56337	0.927	0.88957	1	0.43983	0.838	0.61933	0.951	NA	NA	4e-05	0.00111	1	1
del_3p14.1	373 (71%)	155	0.81106	1	0.99549	1	0.19702	0.537	0.04396	0.221	0.28615	0.682	0.41643	0.815	0.00067351	0.00866	0.59714	0.936	0.91276	1	0.86467	1	0.098319	0.347	0.82736	1
del_3p12.2	305 (58%)	223	0.36885	0.775	0.85819	1	0.64431	0.958	0.20947	0.553	0.4491	0.846	0.4573	0.853	0.00047948	0.00719	0.17657	0.517	1	1	0.87054	1	0.29052	0.688	0.53812	0.927
del_3q11.2	161 (30%)	367	0.69418	1	0.0099052	0.0938	0.38181	0.781	0.087329	0.331	0.40909	0.808	0.68882	0.996	8.2878e-08	2.98e-05	0.14273	0.451	0.58784	0.929	NA	NA	0.18902	0.534	0.37243	0.775
del_4q34.3	78 (15%)	450	0.00028924	0.00521	0.55996	0.927	9.9999e-06	4e-04	9.9999e-06	4e-04	0.71419	1	0.02775	0.178	0.37089	0.775	0.82683	1	NA	NA	NA	NA	0.02452	0.167	0.57915	0.929
del_6q26	151 (29%)	377	0.88445	1	0.23592	0.588	0.36946	0.775	0.56504	0.927	0.017682	0.138	0.58804	0.929	0.027417	0.178	0.21333	0.553	0.033704	0.199	0.64274	0.958	0.069299	0.288	0.12004	0.396
del_6q26	151 (29%)	377	0.90812	1	0.19435	0.534	0.37059	0.775	0.56526	0.927	0.017682	0.138	0.58804	0.929	0.016058	0.134	0.21333	0.553	0.033704	0.199	0.64274	0.958	0.069579	0.288	0.12004	0.396
del_8p23.2	154 (29%)	374	0.032714	0.199	0.13093	0.428	0.099489	0.348	0.073279	0.296	0.78519	1	0.1405	0.451	0.23223	0.585	0.56887	0.927	0.64693	0.958	0.86467	1	0.053779	0.255	0.03612	0.206
del_9p23	152 (29%)	376	2.2921e-05	0.00075	0.022568	0.156	9.9999e-06	4e-04	9.9999e-06	4e-04	0.087861	0.331	0.0017345	0.0195	0.0019047	0.0208	0.35658	0.773	0.70676	1	0.87234	1	0.32147	0.723	0.65493	0.965
del_9p21.3	159 (30%)	369	4.9492e-07	8.91e-05	0.038528	0.213	9.9999e-06	4e-04	9.9999e-06	4e-04	0.012616	0.108	0.00015931	0.00337	0.00076781	0.00953	0.35658	0.773	0.91014	1	0.93506	1	0.058269	0.262	0.82655	1
del_10q23.31	96 (18%)	432	0.16972	0.507	0.46001	0.853	0.01238	0.108	0.00027	0.00512	1	1	0.43368	0.83	0.059332	0.264	0.7381	1	NA	NA	NA	NA	0.14772	0.458	0.4271	0.822
del_13q14.2	82 (16%)	446	0.0010242	0.0123	0.88014	1	3e-05	9e-04	9.9999e-06	4e-04	0.1899	0.534	0.042904	0.221	1	1	0.71532	1	0.47799	0.867	NA	NA	0.088369	0.331	0.3982	0.796
del_14q31.1	228 (43%)	300	0.00065305	0.00866	0.095876	0.346	2e-05	0.00072	5.9999e-05	0.00144	0.0002581	0.00512	0.0011392	0.0132	0.1703	0.507	0.036591	0.206	0.37029	0.775	0.19861	0.538	0.03965	0.214	1	1