Signaling events mediated by the Hedgehog family Entity Mean Std Dev Mean of Up Perturbations Number of Up Perturbations Mean of Down Perturbations Number of Down Perturbations Number of Total Perturbations TGFB2 0.078 0.112 0.323 1.0 -0.44 1.0 2.0 IHH 0.021 0.131 0.212 5.0 -0.419 40.0 45.0 SHH Np/Cholesterol/GAS1 -0.029 0.051 0.12 1.0 -0.234 29.0 30.0 LRPAP1 0.02 0.003 -9999.0 0.0 -9999.0 0.0 0.0 dorsoventral neural tube patterning 0.029 0.05 0.232 29.0 -0.119 1.0 30.0 SMO/beta Arrestin2 0.05 0.117 0.294 1.0 -0.334 13.0 14.0 SMO 0.033 0.111 -9999.0 0.0 -0.345 14.0 14.0 AKT1 0.02 0.098 -9999.0 0.0 -0.412 14.0 14.0 ARRB2 0.02 0.003 -9999.0 0.0 -9999.0 0.0 0.0 BOC 0.019 0.006 -9999.0 0.0 -9999.0 0.0 0.0 ADRBK1 0.02 0.002 -9999.0 0.0 -9999.0 0.0 0.0 heart looping 0.032 0.11 -9999.0 0.0 -0.341 14.0 14.0 STIL 0.036 0.095 0.245 36.0 -0.289 2.0 38.0 DHH N/PTCH2 0.027 0.054 -9999.0 0.0 -0.298 11.0 11.0 DHH N/PTCH1 0.055 0.1 -9999.0 0.0 -0.267 19.0 19.0 PIK3CA 0.018 0.02 -9999.0 0.0 -0.417 1.0 1.0 DHH 0.01 0.065 -9999.0 0.0 -0.417 12.0 12.0 PTHLH 0.094 0.141 0.336 7.0 -0.525 1.0 8.0 determination of left/right symmetry 0.032 0.11 -9999.0 0.0 -0.341 14.0 14.0 PIK3R1 0.017 0.02 -9999.0 0.0 -0.417 1.0 1.0 skeletal system development 0.094 0.141 0.335 7.0 -0.521 1.0 8.0 IHH N/Hhip -0.049 0.175 0.22 5.0 -0.326 142.0 147.0 DHH N/Hhip -0.048 0.145 -9999.0 0.0 -0.306 123.0 123.0 mol:Cholesterol 0.0 0.0 -9999.0 0.0 -9999.0 0.0 0.0 heart development 0.032 0.11 -9999.0 0.0 -0.341 14.0 14.0 pancreas development -0.074 0.184 0.188 10.0 -0.416 116.0 126.0 HHAT 0.019 0.004 -9999.0 0.0 -9999.0 0.0 0.0 PI3K 0.025 0.022 -9999.0 0.0 -0.301 2.0 2.0 EntrezGene:84976 0.0 0.0 -9999.0 0.0 -9999.0 0.0 0.0 GAS1 -0.002 0.095 0.188 1.0 -0.417 26.0 27.0 somite specification 0.032 0.11 -9999.0 0.0 -0.341 14.0 14.0 SHH Np/Cholesterol/PTCH1 0.029 0.086 -9999.0 0.0 -0.273 4.0 4.0 SHH Np/Cholesterol/PTCH2 -0.015 0.041 0.121 21.0 -0.228 10.0 31.0 SHH Np/Cholesterol/Megalin -0.032 0.061 0.121 1.0 -0.252 35.0 36.0 SHH -0.021 0.036 -9999.0 0.0 -0.301 8.0 8.0 catabolic process 0.06 0.102 -9999.0 0.0 -0.284 14.0 14.0 SMO/Vitamin D3 0.037 0.11 0.309 10.0 -0.36 4.0 14.0 SHH Np/Cholesterol/Hhip -0.061 0.095 0.121 7.0 -0.24 109.0 116.0 LRP2 -0.01 0.111 0.188 1.0 -0.417 36.0 37.0 receptor-mediated endocytosis 0.01 0.115 0.248 8.0 -0.419 13.0 21.0 SHH Np/Cholesterol/BOC -0.02 0.03 -9999.0 0.0 -0.229 10.0 10.0 SHH Np/Cholesterol/CDO -0.007 0.053 0.124 52.0 -0.231 10.0 62.0 mesenchymal cell differentiation 0.061 0.094 0.239 109.0 -0.12 7.0 116.0 mol:Vitamin D3 0.061 0.115 0.299 38.0 -0.287 3.0 41.0 IHH N/PTCH2 0.034 0.087 0.19 17.0 -0.246 39.0 56.0 CDON 0.039 0.053 0.188 59.0 -9999.0 0.0 59.0 IHH N/PTCH1 0.078 0.112 0.256 4.0 -0.286 14.0 18.0 Megalin/LRPAP1 0.007 0.081 -9999.0 0.0 -0.3 34.0 34.0 PTCH2 0.027 0.036 0.188 25.0 -9999.0 0.0 25.0 SHH Np/Cholesterol -0.016 0.03 -9999.0 0.0 -0.225 10.0 10.0 PTCH1 0.061 0.103 -9999.0 0.0 -0.284 14.0 14.0 HHIP -0.074 0.184 0.188 10.0 -0.417 116.0 126.0