Clinical Features	Time to Death		YEARS_TO_BIRTH		GENDER		RADIATION_THERAPY		KARNOFSKY_PERFORMANCE_SCORE		HISTOLOGICAL_TYPE		RACE		ETHNICITY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p gain	13 (3%)	499	0.0039573	0.0401	0.012556	0.0884	0.26253	0.575	0.034114	0.179	0.81072	0.984	0.0082999	0.0648	0.55469	0.859	1	1
1q gain	23 (4%)	489	0.36351	0.699	5.1015e-05	0.00118	0.52192	0.836	0.65498	0.905	0.1151	0.362	0.080689	0.297	0.2785	0.594	0.38491	0.721
2p gain	14 (3%)	498	0.14787	0.426	0.078307	0.292	0.78728	0.975	0.38696	0.721	0.49231	0.821	0.54922	0.856	1	1	0.59857	0.888
2q gain	13 (3%)	499	0.31921	0.636	0.17237	0.453	0.57703	0.868	0.14098	0.415	0.49231	0.821	0.5619	0.863	1	1	0.56897	0.865
3p gain	11 (2%)	501	0.036184	0.183	0.084858	0.307	0.55061	0.856	1	1	0.81297	0.985	0.02869	0.16	1	1	1	1
3q gain	8 (2%)	504	0.0019374	0.0231	0.033235	0.179	0.47618	0.816	0.41311	0.747	0.30433	0.626	0.091399	0.32	1	1	1	1
4p gain	13 (3%)	499	0.72179	0.939	0.64646	0.905	1	1	0.38696	0.721	0.79735	0.982	0.02347	0.141	0.18847	0.477	1	1
4q gain	6 (1%)	506	0.061719	0.256	0.1737	0.453	0.69689	0.918	0.41311	0.747	NA	NA	0.11256	0.358	1	1	1	1
5p gain	11 (2%)	501	0.028308	0.16	0.032083	0.176	1	1	0.54218	0.851	0.80001	0.982	0.24502	0.561	0.080889	0.297	1	1
5q gain	8 (2%)	504	0.050454	0.225	0.074815	0.286	1	1	1	1	0.54162	0.851	0.90011	1	0.04387	0.21	1	1
6p gain	7 (1%)	505	0.68824	0.912	0.12344	0.372	0.25058	0.567	0.08654	0.31	0.81545	0.986	0.23607	0.55	1	1	1	1
7p gain	121 (24%)	391	6.048e-09	4.35e-07	2.927e-10	2.65e-08	0.2104	0.514	0.00082367	0.0116	0.0010617	0.0138	0.20442	0.506	0.01672	0.109	1	1
7q gain	151 (29%)	361	1.6916e-07	7.31e-06	3.2773e-10	2.65e-08	0.4954	0.821	0.00086713	0.012	0.0064088	0.0526	0.03913	0.195	0.0096299	0.0717	0.55562	0.859
8p gain	46 (9%)	466	0.61375	0.896	0.75184	0.967	0.53443	0.845	0.072649	0.285	0.098142	0.328	0.3223	0.637	1	1	0.51608	0.832
8q gain	56 (11%)	456	0.54452	0.852	0.16581	0.445	0.66955	0.905	0.025563	0.147	0.27838	0.594	0.12765	0.381	0.64057	0.905	0.14265	0.418
9p gain	17 (3%)	495	0.28499	0.6	0.10396	0.344	0.044157	0.21	0.035081	0.179	0.58314	0.873	0.23565	0.55	0.65468	0.905	1	1
9q gain	24 (5%)	488	0.17535	0.453	0.077454	0.292	0.002681	0.0294	0.0017338	0.0212	0.56683	0.865	0.058559	0.246	0.21265	0.516	0.6609	0.905
10p gain	57 (11%)	455	0.67658	0.905	0.021506	0.134	0.25834	0.574	0.011027	0.0803	0.20653	0.509	0.00017	0.00324	1	1	0.1359	0.402
10q gain	12 (2%)	500	0.92637	1	0.25146	0.567	1	1	0.38515	0.721	0.75674	0.969	0.00351	0.0367	0.10721	0.347	0.16367	0.444
11p gain	31 (6%)	481	0.22327	0.536	0.03838	0.193	0.26556	0.575	0.24444	0.561	0.43628	0.768	0.0067399	0.0546	1	1	0.44177	0.774
11q gain	58 (11%)	454	0.16632	0.445	0.12242	0.371	0.26332	0.575	0.77352	0.975	0.78725	0.975	0.23538	0.55	0.90119	1	0.76738	0.974
12p gain	33 (6%)	479	0.32675	0.642	0.43806	0.769	0.20756	0.509	0.022694	0.139	0.85367	1	0.32957	0.645	0.4345	0.767	1	1
12q gain	16 (3%)	496	0.0057913	0.0514	0.30672	0.627	0.31715	0.636	0.42536	0.757	0.073948	0.285	0.85869	1	0.17168	0.453	0.61514	0.896
13q gain	6 (1%)	506	0.41083	0.747	0.94012	1	1	1	0.033886	0.179	0.068824	0.279	1	1	1	1	1	1
14q gain	4 (1%)	508	0.10952	0.353	0.2518	0.567	1	1	0.64155	0.905	0.97262	1	0.83918	1	1	1	0.24276	0.56
15q gain	11 (2%)	501	0.050777	0.225	0.025878	0.147	1	1	0.54218	0.851	0.013772	0.0929	0.40439	0.74	0.49501	0.821	1	1
16p gain	17 (3%)	495	0.67657	0.905	0.071638	0.283	0.62098	0.897	0.3059	0.627	0.76233	0.971	0.093329	0.322	0.63226	0.904	0.61514	0.896
16q gain	19 (4%)	493	0.41565	0.747	0.60617	0.894	0.48959	0.821	0.4608	0.798	0.62894	0.902	0.01425	0.0942	0.67699	0.905	0.62325	0.897
17p gain	20 (4%)	492	0.0055474	0.0499	0.017613	0.114	0.10635	0.346	0.48869	0.821	0.66552	0.905	0.059499	0.249	0.22095	0.532	1	1
17q gain	23 (4%)	489	0.0031579	0.0335	0.11765	0.367	0.085814	0.309	0.66354	0.905	0.94614	1	0.27591	0.592	0.26062	0.574	0.63596	0.905
18p gain	17 (3%)	495	0.0006873	0.0101	0.99333	1	0.62098	0.897	0.61299	0.896	0.38994	0.722	0.38286	0.721	0.28295	0.599	0.61514	0.896
18q gain	13 (3%)	499	0.00051552	0.00815	0.78111	0.975	1	1	0.091481	0.32	0.51407	0.832	0.45841	0.796	0.1919	0.484	1	1
19p gain	100 (20%)	412	0.70174	0.921	0.013031	0.0906	0.21992	0.532	0.058129	0.246	0.48277	0.82	9.9999e-06	0.00027	0.53214	0.843	0.11149	0.356
19q gain	25 (5%)	487	1.3217e-07	6.12e-06	7.0233e-06	0.000217	0.41618	0.747	0.06835	0.279	0.068619	0.279	0.15576	0.437	0.096359	0.325	0.67027	0.905
20p gain	43 (8%)	469	8.2691e-12	8.93e-10	2.1915e-08	1.42e-06	0.87291	1	0.040149	0.199	0.012389	0.0882	0.19933	0.499	0.3885	0.721	0.50337	0.826
20q gain	43 (8%)	469	1.1737e-12	1.52e-10	2.9779e-08	1.75e-06	0.42341	0.757	0.040451	0.199	0.012389	0.0882	0.30409	0.626	0.62554	0.899	0.50337	0.826
21q gain	24 (5%)	488	0.17846	0.455	0.0059704	0.0516	0.40149	0.737	0.17707	0.454	0.12416	0.372	0.86752	1	0.40811	0.745	0.39303	0.726
22q gain	23 (4%)	489	0.76829	0.974	0.045678	0.214	0.83113	0.999	0.12234	0.371	0.19391	0.487	0.00411	0.0404	0.73244	0.947	0.159	0.442
xp gain	21 (4%)	491	0.81762	0.987	0.99398	1	0.1189	0.367	0.2458	0.561	0.49973	0.824	0.03494	0.179	0.25911	0.574	1	1
xq gain	39 (8%)	473	0.32009	0.636	0.049602	0.225	0.0042966	0.0416	0.29366	0.616	0.51549	0.832	0.0074299	0.0587	0.59327	0.884	0.01935	0.123
1p loss	184 (36%)	328	9.0466e-05	0.00189	0.0010131	0.0134	0.85345	1	5.6191e-08	3.03e-06	0.26946	0.58	9.9999e-06	0.00027	0.3166	0.636	0.70411	0.922
1q loss	25 (5%)	487	0.52386	0.836	0.094521	0.322	0.83712	1	1	1	0.59587	0.886	0.0045	0.0423	0.21115	0.514	1	1
2p loss	21 (4%)	491	0.30169	0.625	0.52802	0.839	0.65609	0.905	0.013842	0.0929	0.06946	0.28	0.22873	0.543	1	1	0.38548	0.721
2q loss	18 (4%)	494	0.90444	1	0.48048	0.82	0.81006	0.984	0.12021	0.367	0.2279	0.543	0.04917	0.225	1	1	0.62325	0.897
3p loss	30 (6%)	482	0.046628	0.217	0.88294	1	0.45045	0.785	0.24186	0.56	0.0019842	0.0231	0.91355	1	0.31282	0.633	0.43141	0.766
3q loss	28 (5%)	484	0.024477	0.146	0.44344	0.775	0.69653	0.918	0.29997	0.623	0.098209	0.328	0.96876	1	0.27968	0.594	0.70011	0.92
4p loss	71 (14%)	441	0.64163	0.905	0.0040376	0.0403	0.054164	0.236	1	1	0.9576	1	3e-04	0.00512	0.5112	0.832	0.79604	0.982
4q loss	92 (18%)	420	0.31998	0.636	0.15036	0.429	0.20256	0.503	0.71214	0.93	0.74528	0.96	0.0061699	0.0526	0.87063	1	1	1
5p loss	34 (7%)	478	0.67046	0.905	0.34243	0.662	0.72424	0.94	0.0072816	0.0583	0.36587	0.701	0.01391	0.0929	0.67509	0.905	0.15399	0.436
5q loss	33 (6%)	479	0.16484	0.445	0.25477	0.571	0.47008	0.812	0.0031081	0.0335	0.92115	1	0.02475	0.146	0.66932	0.905	0.71293	0.93
6p loss	30 (6%)	482	8.2981e-05	0.00185	0.054792	0.237	0.57344	0.865	0.057821	0.246	0.076412	0.29	0.23071	0.546	0.062619	0.258	1	1
6q loss	62 (12%)	450	1.964e-05	0.000489	0.029133	0.161	0.41378	0.747	0.025563	0.147	0.0006171	0.00952	0.00136	0.0173	0.051169	0.225	0.56342	0.863
7p loss	3 (1%)	509	0.65195	0.905	0.64345	0.905	0.588	0.878	0.52511	0.836	NA	NA	0.78696	0.975	1	1	1	1
7q loss	3 (1%)	509	0.8518	1	0.94527	1	1	1	0.52511	0.836	0.97262	1	0.78777	0.975	1	1	1	1
8p loss	17 (3%)	495	0.04497	0.213	0.17401	0.453	0.81006	0.984	0.091178	0.32	0.33358	0.649	0.38662	0.721	0.11328	0.358	0.31699	0.636
8q loss	11 (2%)	501	0.043837	0.21	0.11137	0.356	0.55061	0.856	0.16309	0.444	0.51407	0.832	0.8002	0.982	0.093119	0.322	0.16367	0.444
9p loss	117 (23%)	395	3.0975e-06	0.000112	0.002039	0.0232	1	1	0.00096308	0.013	0.0022027	0.0246	0.058189	0.246	0.60704	0.894	0.66851	0.905
9q loss	50 (10%)	462	0.0085842	0.0654	0.0059481	0.0516	1	1	0.011003	0.0803	0.00038405	0.00638	0.87916	1	0.13492	0.401	1	1
10p loss	83 (16%)	429	0	0	5.9598e-20	1.29e-17	0.81044	0.984	0.00013806	0.00271	0.00021803	0.00392	8.9999e-05	0.00189	0.0088399	0.0666	0.80379	0.983
10q loss	96 (19%)	416	0	0	2.0305e-17	3.29e-15	0.6492	0.905	4.7377e-06	0.000154	0.00046223	0.00749	4e-05	0.00096	0.02519	0.147	0.48359	0.82
11p loss	63 (12%)	449	0.02224	0.137	0.26493	0.575	0.34347	0.662	0.0062494	0.0526	0.17682	0.454	0.00064999	0.0098	0.56131	0.863	0.78425	0.975
11q loss	21 (4%)	491	9.8456e-05	0.00199	0.14896	0.427	1	1	0.081026	0.297	0.084114	0.306	0.01314	0.0906	1	1	1	1
12p loss	26 (5%)	486	0.57128	0.865	0.17223	0.453	0.68622	0.911	0.29853	0.622	0.31164	0.633	0.12021	0.367	1	1	0.39855	0.734
12q loss	51 (10%)	461	0.86184	1	0.16114	0.444	0.65791	0.905	0.16291	0.444	0.94437	1	0.00457	0.0423	0.78833	0.975	0.23389	0.55
13q loss	116 (23%)	396	0.38221	0.721	0.68028	0.905	0.16839	0.449	0.00082367	0.0116	0.14639	0.426	0.56785	0.865	0.29781	0.622	0.38812	0.721
14q loss	80 (16%)	432	2.7525e-06	0.000105	1.6639e-05	0.000431	0.9031	1	0.15578	0.437	0.033913	0.179	0.25793	0.574	0.22792	0.543	0.603	0.892
15q loss	51 (10%)	461	0.30821	0.628	0.34152	0.662	0.65791	0.905	0.20279	0.503	0.7888	0.975	0.64687	0.905	0.78599	0.975	0.75905	0.969
16p loss	14 (3%)	498	0.050899	0.225	0.00024353	0.00427	1	1	0.26601	0.575	0.15099	0.429	0.74396	0.96	0.58209	0.873	0.23944	0.556
16q loss	22 (4%)	490	0.073735	0.285	0.00021689	0.00392	0.66378	0.905	0.020955	0.132	0.074965	0.286	0.51218	0.832	0.49255	0.821	0.65199	0.905
17p loss	13 (3%)	499	0.03508	0.179	0.073913	0.285	0.26253	0.575	1	1	0.0084936	0.0654	0.72596	0.941	1	1	0.049257	0.225
17q loss	8 (2%)	504	0.42437	0.757	0.15823	0.442	1	1	0.68048	0.905	0.071654	0.283	0.75365	0.967	1	1	0.094412	0.322
18p loss	68 (13%)	444	0.67185	0.905	0.0019964	0.0231	0.11605	0.363	1	1	0.4739	0.815	0.14729	0.426	0.10035	0.333	0.78425	0.975
18q loss	62 (12%)	450	0.66925	0.905	0.023556	0.141	0.49872	0.824	0.88488	1	0.87801	1	0.03262	0.178	0.10528	0.345	0.78389	0.975
19p loss	25 (5%)	487	0.82404	0.993	0.80361	0.983	1	1	0.51265	0.832	0.077916	0.292	0.93303	1	0.01871	0.12	0.051438	0.225
19q loss	209 (41%)	303	0.0013893	0.0173	0.043731	0.21	0.92794	1	4.1015e-06	0.00014	0.3218	0.637	9.9999e-06	0.00027	0.91681	1	0.092856	0.322
20p loss	7 (1%)	505	0.8999	1	0.85779	1	0.25058	0.567	0.046904	0.217	0.4336	0.767	0.49429	0.821	0.14809	0.426	0.38628	0.721
20q loss	3 (1%)	509	0.9308	1	0.96558	1	0.087661	0.312	1	1	0.32628	0.642	0.4726	0.814	1	1	0.18806	0.477
21q loss	36 (7%)	476	0.90556	1	0.61745	0.897	0.49339	0.821	0.26037	0.574	0.0063267	0.0526	0.00359	0.0369	0.57044	0.865	1	1
22q loss	57 (11%)	455	8.5265e-08	4.25e-06	2.0556e-06	8.32e-05	0.48206	0.82	0.035034	0.179	0.0052668	0.0481	0.11962	0.367	0.17524	0.453	0.55975	0.863
xp loss	99 (19%)	413	0.28356	0.599	0.78022	0.975	0.57368	0.865	0.071544	0.283	0.33369	0.649	0.67528	0.905	0.69126	0.914	0.1054	0.345
xq loss	71 (14%)	441	0.0045349	0.0423	0.17415	0.453	0.52267	0.836	0.095369	0.324	0.16387	0.444	0.75959	0.969	0.65327	0.905	1	1