Clinical Features Time to Death YEARS_TO_BIRTH PATHOLOGIC_STAGE PATHOLOGY_T_STAGE PATHOLOGY_N_STAGE PATHOLOGY_M_STAGE GENDER RADIATION_THERAPY HISTOLOGICAL_TYPE RESIDUAL_TUMOR RACE ETHNICITY nCNV (%) nWild-Type logrank test_P logrank test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 56 (15%) 306 0.79943 1 0.13571 0.625 0.4536 0.863 0.12044 0.613 1 1 1 1 0.16062 0.658 1 1 1 1 0.25882 0.744 0.076459 0.58 0.23384 0.736 1q gain 220 (61%) 142 0.96597 1 0.51012 0.911 0.51047 0.911 0.61103 0.956 0.5603 0.944 0.30025 0.773 0.5634 0.944 0.70937 1 0.13292 0.625 0.64651 0.974 0.14702 0.632 1 1 2p gain 44 (12%) 318 0.13598 0.625 0.10849 0.601 0.089779 0.58 0.085529 0.58 0.042959 0.549 0.072675 0.58 9.346e-05 0.046 1 1 0.38958 0.823 0.072419 0.58 0.27522 0.748 0.6753 0.999 2q gain 40 (11%) 322 0.14124 0.63 0.44053 0.858 0.15301 0.647 0.14284 0.63 0.33463 0.801 0.072675 0.58 0.00046612 0.0766 1 1 0.34937 0.809 0.21871 0.736 0.71757 1 0.65313 0.98 3p gain 35 (10%) 327 0.24449 0.736 0.53862 0.936 0.325 0.797 0.7937 1 0.24958 0.736 0.35107 0.809 0.12976 0.625 1 1 1 1 0.24121 0.736 0.77554 1 0.37286 0.821 3q gain 38 (10%) 324 0.04727 0.574 0.72713 1 0.33207 0.8 0.78194 1 0.26907 0.744 0.36198 0.811 0.14533 0.63 1 1 0.63501 0.966 0.27496 0.748 0.62872 0.966 0.15284 0.647 4p gain 26 (7%) 336 0.12082 0.613 0.70411 1 0.63242 0.966 0.59018 0.956 1 1 1 1 0.12544 0.618 1 1 1 1 0.87797 1 1 1 0.60988 0.956 4q gain 7 (2%) 355 0.93071 1 0.23974 0.736 0.75893 1 0.67956 0.999 1 1 1 1 1 1 1 1 1 1 0.16952 0.662 0.57939 0.954 0.2376 0.736 5p gain 135 (37%) 227 0.069958 0.58 0.11647 0.603 0.33718 0.801 0.072139 0.58 0.55399 0.942 1 1 0.72648 1 0.10829 0.601 0.73198 1 0.83365 1 0.93304 1 1 1 5q gain 107 (30%) 255 0.24644 0.736 0.066956 0.58 0.92027 1 0.35786 0.811 0.56293 0.944 1 1 0.10745 0.601 0.026409 0.456 1 1 0.67726 0.999 0.82168 1 0.53997 0.936 6p gain 114 (31%) 248 0.29188 0.766 0.15663 0.654 0.54146 0.936 0.23072 0.736 0.55475 0.942 0.5955 0.956 0.33249 0.8 0.43836 0.856 0.71549 1 0.60987 0.956 0.28522 0.757 0.36327 0.811 6q gain 64 (18%) 298 0.30208 0.773 0.73764 1 0.1963 0.702 0.23253 0.736 1 1 0.14037 0.63 0.23724 0.736 1 1 1 1 0.24433 0.736 0.3481 0.809 0.063915 0.58 7p gain 109 (30%) 253 0.81347 1 0.015899 0.372 0.38198 0.823 0.74146 1 0.19582 0.702 1 1 0.32498 0.797 1 1 0.70884 1 0.77741 1 0.25957 0.744 0.54815 0.936 7q gain 109 (30%) 253 0.60573 0.956 0.0071177 0.292 0.37528 0.822 0.45643 0.866 0.20068 0.712 1 1 1 1 0.43723 0.856 0.70461 1 0.97014 1 0.10942 0.601 0.23446 0.736 8p gain 78 (22%) 284 0.75757 1 0.090891 0.58 0.98399 1 0.87872 1 1 1 1 1 0.039085 0.506 0.16352 0.659 0.37223 0.821 0.12793 0.623 0.14177 0.63 0.48799 0.899 8q gain 185 (51%) 177 0.87938 1 0.13252 0.625 0.21125 0.729 0.33663 0.801 0.59482 0.956 1 1 0.0010314 0.127 0.12144 0.613 0.63663 0.966 1 1 0.03308 0.477 1 1 9p gain 19 (5%) 343 0.85395 1 0.20477 0.722 0.080589 0.58 0.12266 0.613 1 1 0.22165 0.736 0.32112 0.796 1 1 0.074609 0.58 0.20648 0.724 0.30078 0.773 0.48774 0.899 9q gain 21 (6%) 341 0.71817 1 0.14409 0.63 0.12554 0.618 0.092189 0.58 1 1 0.23415 0.736 0.051351 0.58 1 1 0.4183 0.851 0.25225 0.736 0.70551 1 0.54644 0.936 10p gain 61 (17%) 301 0.19017 0.699 0.0098775 0.324 0.089749 0.58 0.090089 0.58 1 1 0.14037 0.63 1 1 0.32054 0.796 0.37783 0.823 0.85004 1 0.35351 0.809 0.25292 0.736 10q gain 37 (10%) 325 0.81189 1 0.13574 0.625 0.10193 0.601 0.091729 0.58 1 1 0.060462 0.58 0.45658 0.866 0.4994 0.91 0.62495 0.965 0.91403 1 0.96066 1 0.14365 0.63 11p gain 17 (5%) 345 0.45241 0.863 0.80716 1 0.3865 0.823 0.25152 0.736 1 1 0.19618 0.702 0.42763 0.854 1 1 1 1 0.01391 0.358 0.84965 1 1 1 11q gain 18 (5%) 344 0.3795 0.823 0.63358 0.966 0.23942 0.736 0.087999 0.58 1 1 0.22165 0.736 0.2983 0.773 1 1 1 1 0.02046 0.421 0.72314 1 1 1 12p gain 40 (11%) 322 0.052587 0.58 0.43641 0.856 0.22835 0.736 0.081569 0.58 1 1 1 1 0.27985 0.748 1 1 0.0050699 0.249 0.77191 1 0.96259 1 1 1 12q gain 46 (13%) 316 0.88702 1 0.40148 0.833 0.058419 0.58 0.063969 0.58 0.35261 0.809 1 1 0.30883 0.779 0.60268 0.956 0.061229 0.58 0.42726 0.854 1 1 0.66955 0.995 13q gain 23 (6%) 339 0.23308 0.736 0.95195 1 0.1311 0.625 0.64359 0.971 0.20957 0.726 0.2465 0.736 0.10549 0.601 0.37392 0.821 1 1 0.23472 0.736 0.54357 0.936 0.18359 0.692 14q gain 23 (6%) 339 0.52493 0.927 0.46076 0.872 0.49761 0.91 0.54025 0.936 1 1 0.19618 0.702 0.24807 0.736 1 1 0.10674 0.601 0.091489 0.58 0.18918 0.699 0.56458 0.945 15q gain 33 (9%) 329 0.50751 0.911 0.99438 1 0.44372 0.86 0.351 0.809 1 1 1 1 0.69573 1 1 1 0.19206 0.7 0.9025 1 0.60338 0.956 0.34373 0.805 16p gain 29 (8%) 333 0.38928 0.823 0.14375 0.63 0.31316 0.786 0.25112 0.736 1 1 1 1 1 1 0.10453 0.601 0.081759 0.58 0.5754 0.954 0.38644 0.823 0.61011 0.956 16q gain 15 (4%) 347 0.7013 1 0.049499 0.58 0.25448 0.737 0.16627 0.659 1 1 1 1 0.78291 1 0.27083 0.744 0.02316 0.438 0.35504 0.809 0.22936 0.736 0.39854 0.831 17p gain 30 (8%) 332 0.83359 1 0.56809 0.949 0.21204 0.73 0.16276 0.659 1 1 1 1 1 1 1 1 0.54363 0.936 0.085339 0.58 0.27648 0.748 0.61229 0.956 17q gain 93 (26%) 269 0.60409 0.956 0.49875 0.91 0.43418 0.856 0.18557 0.692 0.57589 0.954 0.26572 0.744 0.094934 0.58 1 1 0.82523 1 0.059439 0.58 0.087929 0.58 1 1 18p gain 35 (10%) 327 0.82299 1 0.42011 0.851 0.11458 0.601 0.15992 0.658 1 1 0.34002 0.802 0.8487 1 1 1 1 1 0.094159 0.58 0.062919 0.58 1 1 18q gain 27 (7%) 335 0.77014 1 0.15341 0.647 0.058569 0.58 0.16114 0.658 1 1 0.27076 0.744 0.66787 0.994 1 1 1 1 0.03613 0.489 0.18442 0.692 1 1 19p gain 54 (15%) 308 0.3787 0.823 0.50128 0.91 0.079849 0.58 0.91276 1 0.39614 0.829 0.012392 0.348 0.03885 0.506 1 1 0.48147 0.895 0.10637 0.601 0.26221 0.744 0.42443 0.852 19q gain 70 (19%) 292 0.36419 0.811 0.26998 0.744 0.17327 0.674 0.77313 1 0.4695 0.878 0.024783 0.443 0.31743 0.791 1 1 0.75699 1 0.16469 0.659 0.68147 0.999 0.30179 0.773 20p gain 107 (30%) 255 0.0036697 0.227 0.027372 0.456 0.085429 0.58 0.11834 0.61 1 1 0.092402 0.58 0.21879 0.736 0.67803 0.999 1 1 0.3284 0.798 0.81374 1 1 1 20q gain 111 (31%) 251 0.022111 0.427 0.038722 0.506 0.1869 0.694 0.11133 0.601 1 1 0.59756 0.956 0.54107 0.936 0.67922 0.999 1 1 0.35023 0.809 0.88675 1 0.76158 1 21q gain 26 (7%) 336 0.47607 0.889 0.66299 0.99 0.01772 0.396 0.01104 0.342 1 1 1 1 0.82736 1 1 1 0.4932 0.905 0.02004 0.421 0.33791 0.801 1 1 22q gain 48 (13%) 314 0.62204 0.963 0.90488 1 0.02409 0.443 0.00323 0.227 0.32551 0.797 1 1 0.24417 0.736 0.60003 0.956 0.42411 0.852 0.31228 0.786 0.93888 1 1 1 xp gain 41 (11%) 321 0.69312 1 0.40363 0.835 0.96548 1 0.78159 1 1 1 1 1 1 1 0.17575 0.681 1 1 0.42923 0.854 0.19047 0.699 1 1 xq gain 63 (17%) 299 0.40857 0.839 0.67108 0.996 0.9955 1 0.98935 1 1 1 1 1 0.17971 0.688 0.097137 0.586 0.73469 1 0.85375 1 0.24985 0.736 0.70672 1 1p loss 81 (22%) 281 0.68288 1 0.33504 0.801 0.50049 0.91 0.36187 0.811 0.54375 0.936 0.05543 0.58 0.2789 0.748 0.35533 0.809 0.28893 0.762 0.33071 0.8 0.79052 1 1 1 1q loss 22 (6%) 340 0.046198 0.572 0.51011 0.911 0.47995 0.894 0.33943 0.802 0.16815 0.659 1 1 0.64107 0.969 1 1 0.43728 0.856 0.27584 0.748 0.65156 0.979 1 1 2p loss 31 (9%) 331 0.75124 1 0.79688 1 0.7174 1 0.63412 0.966 1 1 1 1 0.31507 0.787 0.45208 0.863 0.55673 0.943 0.23366 0.736 0.71432 1 0.61229 0.956 2q loss 36 (10%) 326 0.74759 1 0.25047 0.736 0.95043 1 0.95895 1 1 1 1 1 0.70706 1 0.51067 0.911 0.61426 0.957 0.12502 0.618 0.7193 1 1 1 3p loss 50 (14%) 312 0.71624 1 0.16494 0.659 0.01336 0.355 0.00276 0.227 0.36148 0.811 0.44435 0.86 0.32822 0.798 0.59936 0.956 0.00345 0.227 0.38798 0.823 0.97143 1 1 1 3q loss 38 (10%) 324 0.26848 0.744 0.14718 0.632 0.10954 0.601 0.050889 0.58 0.28822 0.762 1 1 0.46747 0.877 1 1 0.063039 0.58 0.59508 0.956 0.96309 1 1 1 4p loss 106 (29%) 256 0.44943 0.863 0.080119 0.58 0.03631 0.489 0.13595 0.625 0.191 0.699 0.086441 0.58 0.1077 0.601 1 1 1 1 0.41867 0.851 0.051939 0.58 0.066324 0.58 4q loss 146 (40%) 216 0.19757 0.704 0.005359 0.251 0.33187 0.8 0.51464 0.914 0.57006 0.949 0.32412 0.797 0.25006 0.736 0.70684 1 0.73516 1 0.43819 0.856 0.00151 0.155 0.39569 0.829 5p loss 28 (8%) 334 0.30545 0.777 0.050565 0.58 0.39686 0.829 0.22738 0.736 0.24958 0.736 1 1 0.52841 0.932 0.40097 0.833 0.0284 0.456 0.88866 1 0.2624 0.744 1 1 5q loss 39 (11%) 323 0.10659 0.601 0.059408 0.58 0.22179 0.736 0.01443 0.358 0.29767 0.773 1 1 0.85624 1 0.52172 0.923 0.0149 0.358 0.91746 1 0.57022 0.949 1 1 6p loss 27 (7%) 335 0.89195 1 0.6214 0.963 0.17739 0.685 0.32733 0.798 0.22975 0.736 0.29443 0.771 0.02985 0.458 1 1 1 1 1 1 0.18278 0.692 1 1 6q loss 91 (25%) 271 0.51001 0.911 0.01153 0.342 0.31513 0.787 0.70249 1 0.16755 0.659 0.30477 0.777 0.019727 0.421 0.20113 0.712 0.41546 0.85 1 1 0.62775 0.966 1 1 7p loss 16 (4%) 346 0.093652 0.58 0.51099 0.911 0.96535 1 0.8291 1 1 1 1 1 0.16633 0.659 0.27083 0.744 1 1 0.3871 0.823 0.7586 1 0.44479 0.86 7q loss 21 (6%) 341 0.00046702 0.0766 0.42121 0.851 0.94943 1 0.88109 1 1 1 1 1 0.014748 0.358 0.34583 0.808 1 1 0.1305 0.625 0.14231 0.63 0.54644 0.936 8p loss 186 (51%) 176 0.68148 0.999 0.17973 0.688 0.24568 0.736 0.59199 0.956 0.11628 0.603 1 1 0.91014 1 1 1 0.02521 0.443 0.56305 0.944 0.092239 0.58 1 1 8q loss 42 (12%) 320 0.59703 0.956 0.91679 1 0.42694 0.854 0.61087 0.956 0.27869 0.748 0.40423 0.835 0.053203 0.58 1 1 0.67227 0.996 0.54787 0.936 0.65677 0.984 1 1 9p loss 115 (32%) 247 0.11054 0.601 0.029211 0.456 0.26661 0.744 0.80058 1 0.24613 0.736 0.10501 0.601 0.07035 0.58 1 1 1 1 0.43037 0.854 0.18577 0.692 0.23602 0.736 9q loss 105 (29%) 257 0.1137 0.601 0.80597 1 0.072729 0.58 0.56291 0.944 0.020524 0.421 0.06737 0.58 0.21381 0.733 1 1 1 1 0.30251 0.773 0.73473 1 0.35832 0.811 10p loss 44 (12%) 318 0.28547 0.757 0.16769 0.659 0.15391 0.647 0.30661 0.777 0.27869 0.748 1 1 0.86318 1 0.60268 0.956 0.055459 0.58 0.60531 0.956 0.20962 0.726 1 1 10q loss 74 (20%) 288 0.10215 0.601 0.94306 1 0.35273 0.809 0.19587 0.702 0.48495 0.899 0.58338 0.955 0.57581 0.954 1 1 0.02862 0.456 0.44427 0.86 0.00033 0.0766 1 1 11p loss 61 (17%) 301 0.48643 0.899 0.69792 1 0.0081399 0.308 0.01305 0.355 0.075726 0.58 0.54428 0.936 0.7637 1 1 1 0.067229 0.58 0.60094 0.956 0.82666 1 0.24183 0.736 11q loss 70 (19%) 292 0.5551 0.942 0.4525 0.863 0.03568 0.489 0.088629 0.58 0.11212 0.601 1 1 1 1 1 1 0.096889 0.586 0.48918 0.9 0.91907 1 0.080796 0.58 12p loss 61 (17%) 301 0.50513 0.911 0.44588 0.86 0.01745 0.396 0.36605 0.813 0.075726 0.58 0.15682 0.654 0.54745 0.936 0.60559 0.956 1 1 0.24964 0.736 0.43208 0.855 0.46476 0.874 12q loss 33 (9%) 329 0.21797 0.736 0.087324 0.58 0.00375 0.227 0.4978 0.91 1 1 0.056597 0.58 0.69573 1 1 1 0.57988 0.954 0.093659 0.58 0.20946 0.726 0.34373 0.805 13q loss 118 (33%) 244 0.18087 0.69 0.56045 0.944 0.071129 0.58 0.00158 0.155 1 1 0.59971 0.956 0.11957 0.613 0.43414 0.856 0.24822 0.736 0.081539 0.58 0.91616 1 1 1 14q loss 106 (29%) 256 0.05929 0.58 0.11479 0.601 0.04531 0.572 0.0068799 0.292 1 1 0.59756 0.956 0.26616 0.744 1 1 0.36009 0.811 0.70652 1 0.073789 0.58 0.53357 0.936 15q loss 65 (18%) 297 0.0049309 0.249 0.80729 1 0.02892 0.456 0.0094499 0.321 0.08602 0.58 0.58338 0.955 0.88424 1 1 1 0.74225 1 0.77998 1 0.20682 0.724 0.71043 1 16p loss 109 (30%) 253 0.060128 0.58 0.0040127 0.227 0.29564 0.772 0.38617 0.823 0.25135 0.736 0.6066 0.956 0.32498 0.797 0.11007 0.601 1 1 0.1312 0.625 0.00408 0.227 0.23044 0.736 16q loss 144 (40%) 218 0.09437 0.58 0.0002655 0.0766 0.10327 0.601 0.082759 0.58 0.57922 0.954 1 1 0.35685 0.811 0.70845 1 0.73206 1 0.63261 0.966 2e-05 0.0197 0.39163 0.823 17p loss 179 (49%) 183 0.0086225 0.314 0.55199 0.941 0.00091999 0.127 0.01183 0.342 0.24704 0.736 0.62241 0.963 1 1 1 1 0.63797 0.966 0.28232 0.753 0.30222 0.773 0.41154 0.844 17q loss 37 (10%) 325 0.05929 0.58 0.13356 0.625 0.0068499 0.292 0.13727 0.625 0.024456 0.443 0.37274 0.821 0.26372 0.744 1 1 0.01173 0.342 1 1 0.13714 0.625 0.37286 0.821 18p loss 72 (20%) 290 0.76558 1 0.42305 0.852 0.73407 1 0.7392 1 0.50756 0.911 1 1 0.25947 0.744 0.13317 0.625 0.0091599 0.321 0.83686 1 0.76978 1 0.72865 1 18q loss 77 (21%) 285 0.78823 1 0.94762 1 0.7157 1 1 1 0.5295 0.932 0.2278 0.736 0.33693 0.801 0.03418 0.48 0.04647 0.572 0.26036 0.744 1 1 0.15886 0.657 19p loss 54 (15%) 308 0.078684 0.58 0.021775 0.427 0.61817 0.961 0.50667 0.911 0.40461 0.835 1 1 0.1146 0.601 0.59959 0.956 0.48197 0.895 0.38765 0.823 0.056129 0.58 0.43058 0.854 19q loss 38 (10%) 324 0.12245 0.613 0.031299 0.467 0.24853 0.736 0.37944 0.823 0.30704 0.777 1 1 0.14533 0.63 1 1 0.63564 0.966 0.36389 0.811 0.062549 0.58 0.63838 0.966 20p loss 24 (7%) 338 0.86744 1 0.14809 0.634 0.18377 0.692 0.45346 0.863 1 1 0.27076 0.744 0.82462 1 0.38757 0.823 0.057679 0.58 0.66752 0.994 0.65179 0.979 0.59887 0.956 20q loss 12 (3%) 350 0.34144 0.804 0.42065 0.851 0.26636 0.744 0.6957 1 1 1 1 1 0.53059 0.932 0.22239 0.736 0.083709 0.58 0.2547 0.737 0.44764 0.862 0.34876 0.809 21q loss 108 (30%) 254 0.033442 0.477 0.2716 0.744 0.38883 0.823 0.91416 1 0.22051 0.736 0.10177 0.601 0.084095 0.58 1 1 0.11409 0.601 0.52073 0.923 0.66137 0.989 0.5355 0.936 22q loss 66 (18%) 296 0.40578 0.835 0.27679 0.748 0.12692 0.621 0.03254 0.477 1 1 0.57703 0.954 0.38325 0.823 0.61444 0.957 0.0278 0.456 0.02172 0.427 0.0079099 0.308 0.060069 0.58 xp loss 92 (25%) 270 0.29102 0.766 0.076597 0.58 0.78876 1 0.46372 0.874 1 1 1 1 0.0041551 0.227 0.37874 0.823 0.41919 0.851 0.39159 0.823 0.5133 0.913 1 1 xq loss 68 (19%) 294 0.79368 1 0.066062 0.58 0.83414 1 0.46771 0.877 0.46166 0.872 0.58338 0.955 0.030251 0.458 0.62626 0.966 0.15798 0.656 0.63586 0.966 0.16193 0.658 1 1