Clinical Features MRNA_CNMF MRNA_CHIERARCHICAL MIR_CNMF MIR_CHIERARCHICAL CN_CNMF METHLYATION_CNMF RPPA_CNMF RPPA_CHIERARCHICAL MRNASEQ_CNMF MRNASEQ_CHIERARCHICAL MIRSEQ_CNMF MIRSEQ_CHIERARCHICAL MIRSEQ_MATURE_CNMF MIRSEQ_MATURE_CHIERARCHICAL nMutated (%) nWild-Type Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q TP53 385 (83%) 81 1 1 0.21835 1 0.89397 1 0.31209 1 0.48567 1 0.21364 1 0.30087 1 0.23824 1 0.5019 1 0.56757 1 0.96705 1 0.91308 1 1 1 NA NA RB1 15 (3%) 451 0.097149 1 0.28542 1 0.67372 1 0.93218 1 0.11832 1 0.01486 0.624 0.81705 1 0.27837 1 0.23172 1 0.76873 1 0.51263 1 0.26795 1 NA NA NA NA BRCA1 18 (4%) 448 0.04415 0.77 0.53309 1 0.75586 1 0.9927 1 0.0463 0.77 0.04714 0.77 0.20676 1 0.36097 1 0.067279 0.977 0.92869 1 0.069789 0.977 0.13002 1 NA NA NA NA NF1 24 (5%) 442 0.62248 1 0.53995 1 0.72323 1 0.72861 1 0.38214 1 0.03294 0.77 0.076849 0.982 0.0089099 0.624 0.24677 1 0.23269 1 0.59035 1 0.23533 1 0.35714 1 NA NA CDK12 15 (3%) 451 0.01441 0.624 0.11702 1 0.22052 1 0.67772 1 0.33632 1 0.04447 0.77 0.72175 1 0.33112 1 0.46963 1 0.90254 1 0.69658 1 0.83964 1 1 1 NA NA KRAS 5 (1%) 461 0.2597 1 0.35683 1 0.089009 1 0.39654 1 0.0404 0.77 0.74 1 0.065929 0.977 1 1 0.18649 1 0.41849 1 0.34823 1 0.52261 1 NA NA NA NA HNF1B 5 (1%) 461 0.54913 1 0.55493 1 0.86806 1 0.6011 1 0.13627 1 0.62494 1 0.0094199 0.624 0.58473 1 0.35528 1 0.41803 1 0.68634 1 0.58859 1 NA NA NA NA PTEN 5 (1%) 461 0.64969 1 0.55725 1 0.19077 1 0.14487 1 0.28093 1 0.73768 1 1 1 0.50592 1 0.78556 1 0.75369 1 0.68748 1 0.82897 1 NA NA NA NA LARP1 4 (1%) 462 0.1916 1 0.0311 0.77 0.31156 1 0.17604 1 1 1 0.82703 1 0.21162 1 0.24048 1 NA NA NA NA 0.62107 1 0.1202 1 0.35714 1 NA NA BRCA2 13 (3%) 453 0.93492 1 0.5327 1 1 1 0.64865 1 0.35651 1 0.30708 1 0.65581 1 0.46561 1 0.55707 1 0.87762 1 0.81705 1 0.57513 1 0.35714 1 NA NA EFEMP1 7 (2%) 459 1 1 1 1 0.12084 1 0.7492 1 0.2073 1 0.03269 0.77 0.60471 1 0.86026 1 NA NA NA NA 0.70895 1 0.47724 1 NA NA NA NA NRAS 4 (1%) 462 0.83788 1 0.36629 1 0.56631 1 0.20486 1 0.46458 1 0.56673 1 1 1 0.86191 1 NA NA NA NA 0.61873 1 0.23432 1 NA NA NA NA MTA2 4 (1%) 462 0.45595 1 0.36669 1 0.30984 1 0.84319 1 0.40301 1 0.47527 1 0.53104 1 0.65575 1 NA NA NA NA NA NA NA NA 1 1 NA NA ERCC6 4 (1%) 462 0.8393 1 0.18392 1 0.10374 1 0.27864 1 1 1 0.10662 1 0.77648 1 1 1 NA NA NA NA 0.57328 1 0.27247 1 NA NA NA NA IL21R 8 (2%) 458 0.04508 0.77 0.14445 1 0.24735 1 0.01909 0.702 0.12728 1 0.15045 1 0.8041 1 0.11681 1 0.26699 1 0.12095 1 0.73269 1 0.55509 1 NA NA NA NA PKD1L1 6 (1%) 460 1 1 0.86381 1 0.51226 1 0.47023 1 0.16971 1 0.03617 0.77 0.24387 1 0.18911 1 0.82794 1 0.39127 1 0.38713 1 0.35192 1 1 1 NA NA SAMD9L 9 (2%) 457 0.83162 1 0.89643 1 0.69105 1 0.98055 1 0.83972 1 1 1 0.075049 0.982 0.39738 1 0.85267 1 0.57939 1 1 1 1 1 1 1 NA NA AQP2 3 (1%) 463 0.25596 1 0.12498 1 0.37327 1 0.64766 1 0.40375 1 0.38385 1 0.77537 1 1 1 NA NA NA NA NA NA NA NA NA NA NA NA CREBBP 11 (2%) 455 0.5917 1 0.63229 1 1 1 0.49637 1 0.74699 1 0.69161 1 0.45022 1 0.83318 1 0.45032 1 0.57847 1 1 1 0.63938 1 NA NA NA NA C9ORF171 5 (1%) 461 0.00092999 0.273 0.00445 0.624 0.39729 1 0.25453 1 0.86424 1 0.01411 0.624 0.4018 1 0.16556 1 NA NA NA NA 0.2996 1 0.49536 1 NA NA NA NA NCOA3 5 (1%) 461 0.093899 1 0.22679 1 0.73722 1 0.64484 1 0.86537 1 0.52619 1 NA NA NA NA NA NA NA NA 0.17712 1 0.23043 1 NA NA NA NA