name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-OR-A5J1-01A-11D-A29I-10	57	56	1	34	1.754386e-02	coding only	1	28837107	...	22	28	56	7.629059e-07	9.709712e-07	1.941942e-06	-5.711764e+00	...	5	28780908	...	1.737263e-07
TCGA-OR-A5J2-01A-11D-A29I-10	103	101	2	67	1.941748e-02	coding only	1	28837107	...	34	56	102	1.179036e-06	1.941942e-06	3.537109e-06	-5.451352e+00	...	10	28780908	...	3.474526e-07
TCGA-OR-A5J3-01A-11D-A29I-10	99	97	2	59	2.020202e-02	coding only	1	28837107	...	36	52	92	1.248392e-06	1.803232e-06	3.190334e-06	-5.496164e+00	...	2	28780908	...	6.949051e-08
TCGA-OR-A5J4-01A-11D-A29I-10	218	213	5	158	2.293578e-02	coding only	1	28837107	...	53	141	211	1.837910e-06	4.889533e-06	7.316961e-06	-5.135669e+00	...	12	28780908	...	4.169431e-07
TCGA-OR-A5J5-01A-11D-A29I-10	678	662	16	474	2.359882e-02	coding only	1	28837107	...	186	405	666	6.450023e-06	1.404440e-05	2.309524e-05	-4.636477e+00	...	60	28780908	...	2.084715e-06
TCGA-OR-A5J6-01A-31D-A29I-10	148	144	4	83	2.702703e-02	coding only	1	28837107	...	57	74	142	1.976620e-06	2.566138e-06	4.924211e-06	-5.307663e+00	...	7	28780908	...	2.432168e-07
TCGA-OR-A5J7-01A-11D-A29I-10	115	110	5	73	4.347826e-02	exome+100bp flanks	2	35907510	...	35	60	110	9.747265e-07	1.670960e-06	3.063426e-06	-5.513793e+00	...	10	32181536	...	3.107372e-07
TCGA-OR-A5J8-01A-11D-A29I-10	218	213	5	145	2.293578e-02	coding only	1	28837107	...	65	134	208	2.254040e-06	4.646791e-06	7.212929e-06	-5.141888e+00	...	5	28780908	...	1.737263e-07
TCGA-OR-A5JA-01A-11D-A29I-10	757	743	14	596	1.849406e-02	coding only	1	28837107	...	142	573	739	4.924211e-06	1.987023e-05	2.562670e-05	-4.591307e+00	...	10	28780908	...	3.474526e-07
TCGA-OR-A5JB-01A-11D-A29I-10	469	459	10	329	2.132196e-02	coding only	1	28837107	...	125	304	455	4.334693e-06	1.054197e-05	1.577828e-05	-4.801940e+00	...	16	28780908	...	5.559241e-07
TCGA-OR-A5JC-01A-11D-A29I-10	104	100	4	61	3.846154e-02	coding only	1	28837107	...	38	58	103	1.317747e-06	2.011297e-06	3.571787e-06	-5.447114e+00	...	3	28780908	...	1.042358e-07
TCGA-OR-A5JD-01A-11D-A29I-10	90	88	2	54	2.222222e-02	coding only	1	28837107	...	34	44	84	1.179036e-06	1.525812e-06	2.912914e-06	-5.535672e+00	...	4	28780908	...	1.389810e-07
TCGA-OR-A5JF-01A-11D-A29I-10	167	163	4	111	2.395210e-02	coding only	1	28837107	...	52	102	161	1.803232e-06	3.537109e-06	5.583084e-06	-5.253126e+00	...	3	28780908	...	1.042358e-07
TCGA-OR-A5JH-01A-11D-A30A-10	73	71	2	37	2.739726e-02	coding only	1	28837107	...	32	33	69	1.109681e-06	1.144359e-06	2.392750e-06	-5.621103e+00	...	3	28780908	...	1.042358e-07
TCGA-OR-A5JI-01A-11D-A29I-10	79	78	1	52	1.265823e-02	coding only	1	28837107	...	26	42	72	9.016161e-07	1.456457e-06	2.496783e-06	-5.602619e+00	...	3	28780908	...	1.042358e-07
TCGA-OR-A5JK-01A-11D-A29I-10	111	110	1	67	9.009009e-03	coding only	1	28837107	...	43	63	111	1.491134e-06	2.184685e-06	3.849207e-06	-5.414629e+00	...	4	28780908	...	1.389810e-07
TCGA-OR-A5JL-01A-11D-A29I-10	109	106	3	66	2.752294e-02	coding only	1	28837107	...	38	57	105	1.317747e-06	1.976620e-06	3.641142e-06	-5.438762e+00	...	7	28780908	...	2.432168e-07
TCGA-OR-A5JP-01A-11D-A29I-10	185	180	5	125	2.702703e-02	coding only	1	28837107	...	53	108	180	1.837910e-06	3.745175e-06	6.241958e-06	-5.204679e+00	...	14	28780908	...	4.864336e-07
TCGA-OR-A5JQ-01A-11D-A29I-10	92	90	2	48	2.173913e-02	coding only	1	28837107	...	41	44	89	1.421779e-06	1.525812e-06	3.086301e-06	-5.510562e+00	...	2	28780908	...	6.949051e-08
TCGA-OR-A5JR-01A-11D-A29I-10	77	77	0	38	0	coding only	1	28837107	...	39	34	75	1.352424e-06	1.179036e-06	2.600816e-06	-5.584890e+00	...	2	28780908	...	6.949051e-08
TCGA-OR-A5JT-01A-11D-A29I-10	90	87	3	58	3.333333e-02	coding only	1	28837107	...	26	52	86	9.016161e-07	1.803232e-06	2.982269e-06	-5.525453e+00	...	6	28780908	...	2.084715e-07
TCGA-OR-A5JV-01A-11D-A29I-10	78	74	4	45	5.128205e-02	coding only	1	28837107	...	28	42	75	9.709712e-07	1.456457e-06	2.600816e-06	-5.584890e+00	...	1	28780908	...	3.474526e-08
TCGA-OR-A5JW-01A-11D-A29I-10	120	118	2	77	1.666667e-02	coding only	1	28837107	...	38	69	112	1.317747e-06	2.392750e-06	3.883885e-06	-5.410734e+00	...	3	28780908	...	1.042358e-07
TCGA-OR-A5JX-01A-11D-A29I-10	116	114	2	77	1.724138e-02	coding only	1	28837107	...	36	70	111	1.248392e-06	2.427428e-06	3.849207e-06	-5.414629e+00	...	4	28780908	...	1.389810e-07
TCGA-OR-A5JY-01A-31D-A29I-10	153	151	2	107	1.307190e-02	coding only	1	28837107	...	42	96	146	1.456457e-06	3.329044e-06	5.062921e-06	-5.295599e+00	...	6	28780908	...	2.084715e-07
TCGA-OR-A5K2-01A-11D-A29I-10	206	203	3	117	1.456311e-02	coding only	1	28837107	...	84	108	200	2.912914e-06	3.745175e-06	6.935508e-06	-5.158922e+00	...	5	28780908	...	1.737263e-07
TCGA-OR-A5K4-01A-11D-A29I-10	405	399	6	270	1.481481e-02	coding only	1	28837107	...	126	261	394	4.369370e-06	9.050839e-06	1.366295e-05	-4.864455e+00	...	2	28780908	...	6.949051e-08
TCGA-OR-A5K5-01A-11D-A29I-10	221	216	5	167	2.262443e-02	coding only	1	28837107	...	49	147	219	1.699200e-06	5.097599e-06	7.594382e-06	-5.119508e+00	...	19	28780908	...	6.601599e-07
TCGA-OR-A5K8-01A-11D-A29I-10	105	102	3	70	2.857143e-02	coding only	1	28837107	...	29	61	102	1.005649e-06	2.115330e-06	3.537109e-06	-5.451352e+00	...	8	28780908	...	2.779620e-07
TCGA-OR-A5K9-01A-11D-A29I-10	283	278	5	189	1.766784e-02	coding only	1	28837107	...	87	171	277	3.016946e-06	5.929860e-06	9.605679e-06	-5.017472e+00	...	14	28780908	...	4.864336e-07
TCGA-OR-A5KB-01A-11D-A30A-10	2578	2535	43	1922	1.667960e-02	coding only	1	28837107	...	599	1792	2515	2.077185e-05	6.214216e-05	8.721402e-05	-4.059414e+00	...	82	28780908	...	2.849111e-06
TCGA-OR-A5KO-01A-11D-A29I-10	159	153	6	84	3.773585e-02	exome+100bp flanks	2	35907510	...	65	75	151	1.810206e-06	2.088700e-06	4.205248e-06	-5.376208e+00	...	6	32181536	...	1.864423e-07
TCGA-OR-A5KP-01A-11D-A30A-10	160	155	5	105	3.125000e-02	exome+100bp flanks	2	35907510	...	49	84	154	1.364617e-06	2.339343e-06	4.288796e-06	-5.367665e+00	...	18	32181536	...	5.593269e-07
TCGA-OR-A5KS-01A-11D-A30A-10	139	135	4	85	2.877698e-02	coding only	1	28837107	...	50	72	138	1.733877e-06	2.496783e-06	4.785501e-06	-5.320073e+00	...	12	28780908	...	4.169431e-07
TCGA-OR-A5KT-01A-11D-A29I-10	86	84	2	51	2.325581e-02	coding only	1	28837107	...	33	47	86	1.144359e-06	1.629844e-06	2.982269e-06	-5.525453e+00	...	4	28780908	...	1.389810e-07
TCGA-OR-A5KU-01A-11D-A29I-10	117	115	2	72	1.709402e-02	coding only	1	28837107	...	43	64	111	1.491134e-06	2.219363e-06	3.849207e-06	-5.414629e+00	...	3	28780908	...	1.042358e-07
TCGA-OR-A5KV-01A-11D-A29I-10	117	116	1	78	8.547009e-03	coding only	1	28837107	...	35	66	108	1.213714e-06	2.288718e-06	3.745175e-06	-5.426528e+00	...	6	28780908	...	2.084715e-07
TCGA-OR-A5KW-01A-11D-A29I-10	110	109	1	71	9.090909e-03	coding only	1	28837107	...	36	58	105	1.248392e-06	2.011297e-06	3.641142e-06	-5.438762e+00	...	10	28780908	...	3.474526e-07
TCGA-OR-A5KX-01A-11D-A29I-10	116	112	4	74	3.448276e-02	coding only	1	28837107	...	38	54	110	1.317747e-06	1.872587e-06	3.814530e-06	-5.418559e+00	...	15	28780908	...	5.211788e-07
TCGA-OR-A5KZ-01A-11D-A29I-10	100	98	2	65	2.000000e-02	coding only	1	28837107	...	32	49	93	1.109681e-06	1.699200e-06	3.225011e-06	-5.491469e+00	...	10	28780908	...	3.474526e-07
TCGA-OR-A5L1-01A-11D-A30A-10	78	77	1	42	1.282051e-02	coding only	1	28837107	...	34	39	75	1.179036e-06	1.352424e-06	2.600816e-06	-5.584890e+00	...	1	28780908	...	3.474526e-08
TCGA-OR-A5L2-01A-11D-A30A-10	257	253	4	175	1.556420e-02	coding only	1	28837107	...	78	162	253	2.704848e-06	5.617762e-06	8.773418e-06	-5.056831e+00	...	9	28780908	...	3.127073e-07
TCGA-OR-A5L3-01A-11D-A29I-10	101	98	3	57	2.970297e-02	coding only	1	28837107	...	37	49	95	1.283069e-06	1.699200e-06	3.294367e-06	-5.482228e+00	...	7	28780908	...	2.432168e-07
TCGA-OR-A5L4-01A-11D-A29I-10	83	81	2	55	2.409639e-02	coding only	1	28837107	...	25	46	80	8.669386e-07	1.595167e-06	2.774203e-06	-5.556862e+00	...	7	28780908	...	2.432168e-07
TCGA-OR-A5L5-01A-11D-A29I-10	129	125	4	73	3.100775e-02	coding only	1	28837107	...	48	67	121	1.664522e-06	2.323395e-06	4.195983e-06	-5.377166e+00	...	2	28780908	...	6.949051e-08
TCGA-OR-A5L6-01A-11D-A29I-10	119	111	8	74	6.722689e-02	exome+100bp flanks	2	35907510	...	34	65	112	9.468771e-07	1.810206e-06	3.119125e-06	-5.505967e+00	...	5	32181536	...	1.553686e-07
TCGA-OR-A5L9-01A-11D-A29I-10	96	92	4	62	4.166667e-02	coding only	1	28837107	...	28	48	92	9.709712e-07	1.664522e-06	3.190334e-06	-5.496164e+00	...	12	28780908	...	4.169431e-07
TCGA-OR-A5LA-01A-11D-A29I-10	74	71	3	49	4.054054e-02	coding only	1	28837107	...	21	45	73	7.282284e-07	1.560489e-06	2.531461e-06	-5.596629e+00	...	4	28780908	...	1.389810e-07
TCGA-OR-A5LB-01A-11D-A29I-10	376	369	7	288	1.861702e-02	coding only	1	28837107	...	79	206	369	2.739526e-06	7.143574e-06	1.279601e-05	-4.892925e+00	...	79	28780908	...	2.744875e-06
TCGA-OR-A5LC-01A-11D-A29I-10	151	150	1	95	6.622517e-03	coding only	1	28837107	...	54	87	147	1.872587e-06	3.016946e-06	5.097599e-06	-5.292634e+00	...	5	28780908	...	1.737263e-07
TCGA-OR-A5LD-01A-11D-A29I-10	117	112	5	77	4.273504e-02	exome+100bp flanks	2	35907510	...	34	64	111	9.468771e-07	1.782357e-06	3.091275e-06	-5.509862e+00	...	8	32181536	...	2.485898e-07
TCGA-OR-A5LJ-01A-11D-A29I-10	710	696	14	499	1.971831e-02	coding only	1	28837107	...	192	397	695	6.658088e-06	1.376698e-05	2.410089e-05	-4.617967e+00	...	93	28780908	...	3.231309e-06
TCGA-OR-A5LK-01A-11D-A29I-10	135	131	4	86	2.962963e-02	coding only	1	28837107	...	43	75	125	1.491134e-06	2.600816e-06	4.334693e-06	-5.363042e+00	...	5	28780908	...	1.737263e-07
TCGA-OR-A5LL-01A-11D-A29I-10	104	101	3	75	2.884615e-02	coding only	1	28837107	...	25	69	102	8.669386e-07	2.392750e-06	3.537109e-06	-5.451352e+00	...	6	28780908	...	2.084715e-07
TCGA-OR-A5LO-01A-11D-A29I-10	172	168	4	113	2.325581e-02	coding only	1	28837107	...	55	97	165	1.907265e-06	3.363722e-06	5.721794e-06	-5.242468e+00	...	9	28780908	...	3.127073e-07
TCGA-OR-A5LP-01A-11D-A29I-10	92	90	2	56	2.173913e-02	coding only	1	28837107	...	33	50	89	1.144359e-06	1.733877e-06	3.086301e-06	-5.510562e+00	...	4	28780908	...	1.389810e-07
TCGA-OR-A5LR-01A-11D-A29I-10	63	60	3	37	4.761905e-02	coding only	1	28837107	...	22	35	62	7.629059e-07	1.213714e-06	2.150008e-06	-5.667560e+00	...	2	28780908	...	6.949051e-08
TCGA-P6-A5OF-01A-11D-A29I-10	85	84	1	52	1.176471e-02	coding only	1	28837107	...	32	42	81	1.109681e-06	1.456457e-06	2.808881e-06	-5.551467e+00	...	6	28780908	...	2.084715e-07
TCGA-P6-A5OH-01A-11D-A30A-10	287	285	2	201	6.968641e-03	coding only	1	28837107	...	83	171	278	2.878236e-06	5.929860e-06	9.640357e-06	-5.015907e+00	...	23	28780908	...	7.991409e-07
TCGA-PA-A5YG-01A-11D-A29I-10	51	51	0	41	0	coding only	1	28837107	...	9	36	49	3.120979e-07	1.248392e-06	1.699200e-06	-5.769756e+00	...	4	28780908	...	1.389810e-07
TCGA-PK-A5H8-01A-11D-A29I-10	76	76	0	48	0	coding only	1	28837107	...	27	38	71	9.362936e-07	1.317747e-06	2.462106e-06	-5.608693e+00	...	6	28780908	...	2.084715e-07
TCGA-PK-A5HB-01A-11D-A29I-10	1573	1536	37	1118	2.352193e-02	coding only	1	28837107	...	412	957	1544	1.428715e-05	3.318641e-05	5.354213e-05	-4.271304e+00	...	144	28780908	...	5.003317e-06
