[1] "ofn"        "-oTBLCA-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/BLCA-TP/22541056/BLCA-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/BLCA-TP/22507728/transformed.cor.cli.txt"

nPatients in clinical file=412, in cluster file=408, common to both=408
[1]  73 408
[1] "AMP PEAK  1(1P34.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                          101                           307 
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                          101                           307 
[1] "AMP PEAK  2(1Q21.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                          202                           206 
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                          202                           206 
[1] "AMP PEAK  3(1Q23.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE 
                          216                           192 
  AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE 
                          216                           192 
[1] "AMP PEAK  4(2P25.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(2P25.1) MUTATED AMP PEAK  4(2P25.1) WILD-TYPE 
                          152                           256 
  AMP PEAK  4(2P25.1) MUTATED AMP PEAK  4(2P25.1) WILD-TYPE 
                          152                           256 
[1] "AMP PEAK  5(3P25.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(3P25.2) MUTATED AMP PEAK  5(3P25.2) WILD-TYPE 
                          190                           218 
  AMP PEAK  5(3P25.2) MUTATED AMP PEAK  5(3P25.2) WILD-TYPE 
                          190                           218 
[1] "AMP PEAK  6(3Q26.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE 
                           218                            190 
  AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE 
                           218                            190 
[1] "AMP PEAK  7(4P16.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE 
                           74                           334 
  AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE 
                           74                           334 
[1] "AMP PEAK  8(4Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE 
                           62                           346 
  AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE 
                           62                           346 
[1] "AMP PEAK  9(5P15.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE 
                           206                            202 
  AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE 
                           206                            202 
[1] "AMP PEAK 10(6P22.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE 
                          171                           237 
  AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE 
                          171                           237 
[1] "AMP PEAK 11(6Q21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE 
                         35                         373 
  AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE 
                         35                         373 
[1] "AMP PEAK 12(6Q23.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(6Q23.3) MUTATED AMP PEAK 12(6Q23.3) WILD-TYPE 
                           46                           362 
  AMP PEAK 12(6Q23.3) MUTATED AMP PEAK 12(6Q23.3) WILD-TYPE 
                           46                           362 
[1] "AMP PEAK 13(7P21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(7P21.1) MUTATED AMP PEAK 13(7P21.1) WILD-TYPE 
                          201                           207 
  AMP PEAK 13(7P21.1) MUTATED AMP PEAK 13(7P21.1) WILD-TYPE 
                          201                           207 
[1] "AMP PEAK 14(7P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(7P11.2) MUTATED AMP PEAK 14(7P11.2) WILD-TYPE 
                          190                           218 
  AMP PEAK 14(7P11.2) MUTATED AMP PEAK 14(7P11.2) WILD-TYPE 
                          190                           218 
[1] "AMP PEAK 15(8P11.23) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(8P11.23) MUTATED AMP PEAK 15(8P11.23) WILD-TYPE 
                           124                            284 
  AMP PEAK 15(8P11.23) MUTATED AMP PEAK 15(8P11.23) WILD-TYPE 
                           124                            284 
[1] "AMP PEAK 16(8P11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE 
                           140                            268 
  AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE 
                           140                            268 
[1] "AMP PEAK 17(8Q22.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(8Q22.3) MUTATED AMP PEAK 17(8Q22.3) WILD-TYPE 
                          264                           144 
  AMP PEAK 17(8Q22.3) MUTATED AMP PEAK 17(8Q22.3) WILD-TYPE 
                          264                           144 
[1] "AMP PEAK 18(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(8Q24.21) MUTATED AMP PEAK 18(8Q24.21) WILD-TYPE 
                           254                            154 
  AMP PEAK 18(8Q24.21) MUTATED AMP PEAK 18(8Q24.21) WILD-TYPE 
                           254                            154 
[1] "AMP PEAK 19(9P24.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(9P24.1) MUTATED AMP PEAK 19(9P24.1) WILD-TYPE 
                           88                           320 
  AMP PEAK 19(9P24.1) MUTATED AMP PEAK 19(9P24.1) WILD-TYPE 
                           88                           320 
[1] "AMP PEAK 20(10P14) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(10P14) MUTATED AMP PEAK 20(10P14) WILD-TYPE 
                         182                          226 
  AMP PEAK 20(10P14) MUTATED AMP PEAK 20(10P14) WILD-TYPE 
                         182                          226 
[1] "AMP PEAK 21(11P13) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(11P13) MUTATED AMP PEAK 21(11P13) WILD-TYPE 
                          51                          357 
  AMP PEAK 21(11P13) MUTATED AMP PEAK 21(11P13) WILD-TYPE 
                          51                          357 
[1] "AMP PEAK 22(11Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 22(11Q13.3) MUTATED AMP PEAK 22(11Q13.3) WILD-TYPE 
                           135                            273 
  AMP PEAK 22(11Q13.3) MUTATED AMP PEAK 22(11Q13.3) WILD-TYPE 
                           135                            273 
[1] "AMP PEAK 23(11Q22.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 23(11Q22.2) MUTATED AMP PEAK 23(11Q22.2) WILD-TYPE 
                            71                            337 
  AMP PEAK 23(11Q22.2) MUTATED AMP PEAK 23(11Q22.2) WILD-TYPE 
                            71                            337 
[1] "AMP PEAK 24(12P12.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 24(12P12.1) MUTATED AMP PEAK 24(12P12.1) WILD-TYPE 
                           132                            276 
  AMP PEAK 24(12P12.1) MUTATED AMP PEAK 24(12P12.1) WILD-TYPE 
                           132                            276 
[1] "AMP PEAK 25(12Q15) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 25(12Q15) MUTATED AMP PEAK 25(12Q15) WILD-TYPE 
                         118                          290 
  AMP PEAK 25(12Q15) MUTATED AMP PEAK 25(12Q15) WILD-TYPE 
                         118                          290 
[1] "AMP PEAK 26(13Q22.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 26(13Q22.1) MUTATED AMP PEAK 26(13Q22.1) WILD-TYPE 
                           128                            280 
  AMP PEAK 26(13Q22.1) MUTATED AMP PEAK 26(13Q22.1) WILD-TYPE 
                           128                            280 
[1] "AMP PEAK 27(16P13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 27(16P13.2) MUTATED AMP PEAK 27(16P13.2) WILD-TYPE 
                            87                            321 
  AMP PEAK 27(16P13.2) MUTATED AMP PEAK 27(16P13.2) WILD-TYPE 
                            87                            321 
[1] "AMP PEAK 28(16P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 28(16P11.2) MUTATED AMP PEAK 28(16P11.2) WILD-TYPE 
                            98                            310 
  AMP PEAK 28(16P11.2) MUTATED AMP PEAK 28(16P11.2) WILD-TYPE 
                            98                            310 
[1] "AMP PEAK 29(16Q22.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 29(16Q22.1) MUTATED AMP PEAK 29(16Q22.1) WILD-TYPE 
                           108                            300 
  AMP PEAK 29(16Q22.1) MUTATED AMP PEAK 29(16Q22.1) WILD-TYPE 
                           108                            300 
[1] "AMP PEAK 30(17P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 30(17P11.2) MUTATED AMP PEAK 30(17P11.2) WILD-TYPE 
                            88                            320 
  AMP PEAK 30(17P11.2) MUTATED AMP PEAK 30(17P11.2) WILD-TYPE 
                            88                            320 
[1] "AMP PEAK 31(17Q11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 31(17Q11.2) MUTATED AMP PEAK 31(17Q11.2) WILD-TYPE 
                           174                            234 
  AMP PEAK 31(17Q11.2) MUTATED AMP PEAK 31(17Q11.2) WILD-TYPE 
                           174                            234 
[1] "AMP PEAK 32(17Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE 
                         165                          243 
  AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE 
                         165                          243 
[1] "AMP PEAK 33(17Q23.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 33(17Q23.3) MUTATED AMP PEAK 33(17Q23.3) WILD-TYPE 
                           194                            214 
  AMP PEAK 33(17Q23.3) MUTATED AMP PEAK 33(17Q23.3) WILD-TYPE 
                           194                            214 
[1] "AMP PEAK 34(19Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 34(19Q12) MUTATED AMP PEAK 34(19Q12) WILD-TYPE 
                         164                          244 
  AMP PEAK 34(19Q12) MUTATED AMP PEAK 34(19Q12) WILD-TYPE 
                         164                          244 
[1] "AMP PEAK 35(19Q13.43) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 35(19Q13.43) MUTATED AMP PEAK 35(19Q13.43) WILD-TYPE 
                            155                             253 
  AMP PEAK 35(19Q13.43) MUTATED AMP PEAK 35(19Q13.43) WILD-TYPE 
                            155                             253 
[1] "AMP PEAK 36(20Q11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 36(20Q11.21) MUTATED AMP PEAK 36(20Q11.21) WILD-TYPE 
                            263                             145 
  AMP PEAK 36(20Q11.21) MUTATED AMP PEAK 36(20Q11.21) WILD-TYPE 
                            263                             145 
[1] "AMP PEAK 37(22Q12.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 37(22Q12.2) MUTATED AMP PEAK 37(22Q12.2) WILD-TYPE 
                            87                            321 
  AMP PEAK 37(22Q12.2) MUTATED AMP PEAK 37(22Q12.2) WILD-TYPE 
                            87                            321 
[1] "DEL PEAK  1(1P36.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                            91                            317 
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                            91                            317 
[1] "DEL PEAK  2(1Q32.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE 
                           72                           336 
  DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE 
                           72                           336 
[1] "DEL PEAK  3(2Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                          134                           274 
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                          134                           274 
[1] "DEL PEAK  4(2Q34) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE 
                        174                         234 
  DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE 
                        174                         234 
[1] "DEL PEAK  5(2Q37.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE 
                          207                           201 
  DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE 
                          207                           201 
[1] "DEL PEAK  6(3P14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE 
                          117                           291 
  DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE 
                          117                           291 
[1] "DEL PEAK  7(4Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE 
                          161                           247 
  DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE 
                          161                           247 
[1] "DEL PEAK  8(4Q34.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(4Q34.2) MUTATED DEL PEAK  8(4Q34.2) WILD-TYPE 
                          177                           231 
  DEL PEAK  8(4Q34.2) MUTATED DEL PEAK  8(4Q34.2) WILD-TYPE 
                          177                           231 
[1] "DEL PEAK  9(5Q12.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(5Q12.1) MUTATED DEL PEAK  9(5Q12.1) WILD-TYPE 
                          202                           206 
  DEL PEAK  9(5Q12.1) MUTATED DEL PEAK  9(5Q12.1) WILD-TYPE 
                          202                           206 
[1] "DEL PEAK 10(6P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(6P25.3) MUTATED DEL PEAK 10(6P25.3) WILD-TYPE 
                          106                           302 
  DEL PEAK 10(6P25.3) MUTATED DEL PEAK 10(6P25.3) WILD-TYPE 
                          106                           302 
[1] "DEL PEAK 11(6Q21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(6Q21) MUTATED DEL PEAK 11(6Q21) WILD-TYPE 
                        190                         218 
  DEL PEAK 11(6Q21) MUTATED DEL PEAK 11(6Q21) WILD-TYPE 
                        190                         218 
[1] "DEL PEAK 12(6Q27) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(6Q27) MUTATED DEL PEAK 12(6Q27) WILD-TYPE 
                        190                         218 
  DEL PEAK 12(6Q27) MUTATED DEL PEAK 12(6Q27) WILD-TYPE 
                        190                         218 
[1] "DEL PEAK 13(7Q36.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(7Q36.3) MUTATED DEL PEAK 13(7Q36.3) WILD-TYPE 
                           60                           348 
  DEL PEAK 13(7Q36.3) MUTATED DEL PEAK 13(7Q36.3) WILD-TYPE 
                           60                           348 
[1] "DEL PEAK 14(8P23.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(8P23.3) MUTATED DEL PEAK 14(8P23.3) WILD-TYPE 
                          243                           165 
  DEL PEAK 14(8P23.3) MUTATED DEL PEAK 14(8P23.3) WILD-TYPE 
                          243                           165 
[1] "DEL PEAK 15(8P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(8P21.3) MUTATED DEL PEAK 15(8P21.3) WILD-TYPE 
                          252                           156 
  DEL PEAK 15(8P21.3) MUTATED DEL PEAK 15(8P21.3) WILD-TYPE 
                          252                           156 
[1] "DEL PEAK 16(9P23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(9P23) MUTATED DEL PEAK 16(9P23) WILD-TYPE 
                        177                         231 
  DEL PEAK 16(9P23) MUTATED DEL PEAK 16(9P23) WILD-TYPE 
                        177                         231 
[1] "DEL PEAK 17(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(9P21.3) MUTATED DEL PEAK 17(9P21.3) WILD-TYPE 
                          239                           169 
  DEL PEAK 17(9P21.3) MUTATED DEL PEAK 17(9P21.3) WILD-TYPE 
                          239                           169 
[1] "DEL PEAK 18(9Q22.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(9Q22.33) MUTATED DEL PEAK 18(9Q22.33) WILD-TYPE 
                           178                            230 
  DEL PEAK 18(9Q22.33) MUTATED DEL PEAK 18(9Q22.33) WILD-TYPE 
                           178                            230 
[1] "DEL PEAK 19(10P11.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(10P11.21) MUTATED DEL PEAK 19(10P11.21) WILD-TYPE 
                             74                             334 
  DEL PEAK 19(10P11.21) MUTATED DEL PEAK 19(10P11.21) WILD-TYPE 
                             74                             334 
[1] "DEL PEAK 20(10Q23.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(10Q23.31) MUTATED DEL PEAK 20(10Q23.31) WILD-TYPE 
                            168                             240 
  DEL PEAK 20(10Q23.31) MUTATED DEL PEAK 20(10Q23.31) WILD-TYPE 
                            168                             240 
[1] "DEL PEAK 21(11P15.5) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(11P15.5) MUTATED DEL PEAK 21(11P15.5) WILD-TYPE 
                           211                            197 
  DEL PEAK 21(11P15.5) MUTATED DEL PEAK 21(11P15.5) WILD-TYPE 
                           211                            197 
[1] "DEL PEAK 22(11Q23.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(11Q23.3) MUTATED DEL PEAK 22(11Q23.3) WILD-TYPE 
                           153                            255 
  DEL PEAK 22(11Q23.3) MUTATED DEL PEAK 22(11Q23.3) WILD-TYPE 
                           153                            255 
[1] "DEL PEAK 23(11Q25) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE 
                         144                          264 
  DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE 
                         144                          264 
[1] "DEL PEAK 24(12P13.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(12P13.1) MUTATED DEL PEAK 24(12P13.1) WILD-TYPE 
                            68                            340 
  DEL PEAK 24(12P13.1) MUTATED DEL PEAK 24(12P13.1) WILD-TYPE 
                            68                            340 
[1] "DEL PEAK 25(12Q24.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(12Q24.33) MUTATED DEL PEAK 25(12Q24.33) WILD-TYPE 
                             88                             320 
  DEL PEAK 25(12Q24.33) MUTATED DEL PEAK 25(12Q24.33) WILD-TYPE 
                             88                             320 
[1] "DEL PEAK 26(13Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE 
                           156                            252 
  DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE 
                           156                            252 
[1] "DEL PEAK 27(14Q24.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 27(14Q24.1) MUTATED DEL PEAK 27(14Q24.1) WILD-TYPE 
                           137                            271 
  DEL PEAK 27(14Q24.1) MUTATED DEL PEAK 27(14Q24.1) WILD-TYPE 
                           137                            271 
[1] "DEL PEAK 28(15Q13.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 28(15Q13.1) MUTATED DEL PEAK 28(15Q13.1) WILD-TYPE 
                           160                            248 
  DEL PEAK 28(15Q13.1) MUTATED DEL PEAK 28(15Q13.1) WILD-TYPE 
                           160                            248 
[1] "DEL PEAK 29(16P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 29(16P13.3) MUTATED DEL PEAK 29(16P13.3) WILD-TYPE 
                           174                            234 
  DEL PEAK 29(16P13.3) MUTATED DEL PEAK 29(16P13.3) WILD-TYPE 
                           174                            234 
[1] "DEL PEAK 30(16Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 30(16Q23.1) MUTATED DEL PEAK 30(16Q23.1) WILD-TYPE 
                           119                            289 
  DEL PEAK 30(16Q23.1) MUTATED DEL PEAK 30(16Q23.1) WILD-TYPE 
                           119                            289 
[1] "DEL PEAK 31(17P12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 31(17P12) MUTATED DEL PEAK 31(17P12) WILD-TYPE 
                         208                          200 
  DEL PEAK 31(17P12) MUTATED DEL PEAK 31(17P12) WILD-TYPE 
                         208                          200 
[1] "DEL PEAK 32(18Q23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 32(18Q23) MUTATED DEL PEAK 32(18Q23) WILD-TYPE 
                         179                          229 
  DEL PEAK 32(18Q23) MUTATED DEL PEAK 32(18Q23) WILD-TYPE 
                         179                          229 
[1] "DEL PEAK 33(19P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 33(19P13.3) MUTATED DEL PEAK 33(19P13.3) WILD-TYPE 
                           145                            263 
  DEL PEAK 33(19P13.3) MUTATED DEL PEAK 33(19P13.3) WILD-TYPE 
                           145                            263 
[1] "DEL PEAK 34(22Q13.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 34(22Q13.32) MUTATED DEL PEAK 34(22Q13.32) WILD-TYPE 
                            188                             220 
  DEL PEAK 34(22Q13.32) MUTATED DEL PEAK 34(22Q13.32) WILD-TYPE 
                            188                             220 
[1] "DEL PEAK 35(XP11.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 35(XP11.3) MUTATED DEL PEAK 35(XP11.3) WILD-TYPE 
                           91                           317 
  DEL PEAK 35(XP11.3) MUTATED DEL PEAK 35(XP11.3) WILD-TYPE 
                           91                           317 
[1] "DEL PEAK 36(XQ21.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 36(XQ21.33) MUTATED DEL PEAK 36(XQ21.33) WILD-TYPE 
                            84                            324 
  DEL PEAK 36(XQ21.33) MUTATED DEL PEAK 36(XQ21.33) WILD-TYPE 
                            84                            324 
[1] "data2feature, selection=ALL"
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 10 rows and 408 columns.

Variable 1:'CN_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'RPPA_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'RPPA_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MRNASEQ_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_MATURE_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "## **** detect survival parameters (defined in index such as ind_OS, ind_MFS, ind_RFS, ind_RFS, ind_BCR and ind_d2ssd) *** ##"
[1] "detected survival parameters using [ind_OS, overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_OS, curated_overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_TCGAOS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survivial parameters using [ind_MFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_RFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_BCR]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_Progression]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [index_additional_survival_time]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using condition: [is.null(surv.mat)&&(selection=='SURV')]"
[1] "survival parameters accumulated so far"
NULL
[1] "************ conversion from categorical data to rank data ********** "
[1] "****** SUMMARY ***** "
Output Data has 408 columns, 0 survival variables, and 10 non-survival variables.
[1] "* survival variables: "
NULL
[1] "* non-survival variables: "
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
CN_CNMF, nv=5, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=4, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=5, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=5, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=5, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(1P34.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P34.2) MUTATED       23     58      5     14      1
  AMP PEAK  1(1P34.2) WILD-TYPE     55     88    116     47      1
D1V1, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          23                            55
  CLUS_2                          58                            88
  CLUS_3                           5                           116
  CLUS_4                          14                            47
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED       31     45     10     15
  AMP PEAK  1(1P34.2) WILD-TYPE    107     82     53     65
D1V2, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          31                           107
  CLUS_2                          45                            82
  CLUS_3                          10                            53
  CLUS_4                          15                            65
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       31     22     29
  AMP PEAK  1(1P34.2) WILD-TYPE     91     92     75
D1V3, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          31                            91
  CLUS_2                          22                            92
  CLUS_3                          29                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED       25     25     25      7
  AMP PEAK  1(1P34.2) WILD-TYPE     65     96     73     24
D1V4, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          25                            65
  CLUS_2                          25                            96
  CLUS_3                          25                            73
  CLUS_4                           7                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P34.2) MUTATED       14     34      6     27     20
  AMP PEAK  1(1P34.2) WILD-TYPE     58    101     32     76     36
D1V5, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          14                            58
  CLUS_2                          34                           101
  CLUS_3                           6                            32
  CLUS_4                          27                            76
  CLUS_5                          20                            36
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       35     20     46
  AMP PEAK  1(1P34.2) WILD-TYPE     83     92    128
D1V6, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          35                            83
  CLUS_2                          20                            92
  CLUS_3                          46                           128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P34.2) MUTATED       18     27     28      7     21
  AMP PEAK  1(1P34.2) WILD-TYPE     87     47     86     18     66
D1V7, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          18                            87
  CLUS_2                          27                            47
  CLUS_3                          28                            86
  CLUS_4                           7                            18
  CLUS_5                          21                            66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       55     28     18
  AMP PEAK  1(1P34.2) WILD-TYPE    211     55     38
D1V8, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          55                           211
  CLUS_2                          28                            55
  CLUS_3                          18                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED       32     18     27     23
  AMP PEAK  1(1P34.2) WILD-TYPE     92     33    100     69
D1V9, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          32                            92
  CLUS_2                          18                            33
  CLUS_3                          27                           100
  CLUS_4                          23                            69
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P34.2) MUTATED       20     21     15     30     14
  AMP PEAK  1(1P34.2) WILD-TYPE     67     39     26    102     60
D1V10, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          20                            67
  CLUS_2                          21                            39
  CLUS_3                          15                            26
  CLUS_4                          30                           102
  CLUS_5                          14                            60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = AMP PEAK  2(1Q21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1Q21.3) MUTATED       50     95     21     34      2
  AMP PEAK  2(1Q21.3) WILD-TYPE     28     51    100     27      0
D2V1, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          50                            28
  CLUS_2                          95                            51
  CLUS_3                          21                           100
  CLUS_4                          34                            27
  CLUS_5                           2                             0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q21.3) MUTATED       60     79     26     37
  AMP PEAK  2(1Q21.3) WILD-TYPE     78     48     37     43
D2V2, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          60                            78
  CLUS_2                          79                            48
  CLUS_3                          26                            37
  CLUS_4                          37                            43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q21.3) MUTATED       57     54     58
  AMP PEAK  2(1Q21.3) WILD-TYPE     65     60     46
D2V3, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          57                            65
  CLUS_2                          54                            60
  CLUS_3                          58                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q21.3) MUTATED       45     61     51     12
  AMP PEAK  2(1Q21.3) WILD-TYPE     45     60     47     19
D2V4, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          45                            45
  CLUS_2                          61                            60
  CLUS_3                          51                            47
  CLUS_4                          12                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1Q21.3) MUTATED       34     65     15     47     40
  AMP PEAK  2(1Q21.3) WILD-TYPE     38     70     23     56     16
D2V5, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          34                            38
  CLUS_2                          65                            70
  CLUS_3                          15                            23
  CLUS_4                          47                            56
  CLUS_5                          40                            16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q21.3) MUTATED       68     50     83
  AMP PEAK  2(1Q21.3) WILD-TYPE     50     62     91
D2V6, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          68                            50
  CLUS_2                          50                            62
  CLUS_3                          83                            91
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1Q21.3) MUTATED       48     44     52     19     38
  AMP PEAK  2(1Q21.3) WILD-TYPE     57     30     62      6     49
D2V7, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          48                            57
  CLUS_2                          44                            30
  CLUS_3                          52                            62
  CLUS_4                          19                             6
  CLUS_5                          38                            49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q21.3) MUTATED      124     50     27
  AMP PEAK  2(1Q21.3) WILD-TYPE    142     33     29
D2V8, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                         124                           142
  CLUS_2                          50                            33
  CLUS_3                          27                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q21.3) MUTATED       60     29     64     43
  AMP PEAK  2(1Q21.3) WILD-TYPE     64     22     63     49
D2V9, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          60                            64
  CLUS_2                          29                            22
  CLUS_3                          64                            63
  CLUS_4                          43                            49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1Q21.3) MUTATED       36     32     27     71     30
  AMP PEAK  2(1Q21.3) WILD-TYPE     51     28     14     61     44
D2V10, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          36                            51
  CLUS_2                          32                            28
  CLUS_3                          27                            14
  CLUS_4                          71                            61
  CLUS_5                          30                            44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = AMP PEAK  3(1Q23.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q23.3) MUTATED       52    105     26     31      2
  AMP PEAK  3(1Q23.3) WILD-TYPE     26     41     95     30      0
D3V1, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          52                            26
  CLUS_2                         105                            41
  CLUS_3                          26                            95
  CLUS_4                          31                            30
  CLUS_5                           2                             0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q23.3) MUTATED       70     80     28     38
  AMP PEAK  3(1Q23.3) WILD-TYPE     68     47     35     42
D3V2, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          70                            68
  CLUS_2                          80                            47
  CLUS_3                          28                            35
  CLUS_4                          38                            42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q23.3) MUTATED       58     57     65
  AMP PEAK  3(1Q23.3) WILD-TYPE     64     57     39
D3V3, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          58                            64
  CLUS_2                          57                            57
  CLUS_3                          65                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q23.3) MUTATED       46     64     55     15
  AMP PEAK  3(1Q23.3) WILD-TYPE     44     57     43     16
D3V4, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          46                            44
  CLUS_2                          64                            57
  CLUS_3                          55                            43
  CLUS_4                          15                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q23.3) MUTATED       36     73     16     50     40
  AMP PEAK  3(1Q23.3) WILD-TYPE     36     62     22     53     16
D3V5, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          36                            36
  CLUS_2                          73                            62
  CLUS_3                          16                            22
  CLUS_4                          50                            53
  CLUS_5                          40                            16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q23.3) MUTATED       75     53     87
  AMP PEAK  3(1Q23.3) WILD-TYPE     43     59     87
D3V6, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          75                            43
  CLUS_2                          53                            59
  CLUS_3                          87                            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q23.3) MUTATED       49     54     55     16     41
  AMP PEAK  3(1Q23.3) WILD-TYPE     56     20     59      9     46
D3V7, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          49                            56
  CLUS_2                          54                            20
  CLUS_3                          55                            59
  CLUS_4                          16                             9
  CLUS_5                          41                            46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q23.3) MUTATED      127     59     29
  AMP PEAK  3(1Q23.3) WILD-TYPE    139     24     27
D3V8, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                         127                           139
  CLUS_2                          59                            24
  CLUS_3                          29                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q23.3) MUTATED       66     36     65     43
  AMP PEAK  3(1Q23.3) WILD-TYPE     58     15     62     49
D3V9, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          66                            58
  CLUS_2                          36                            15
  CLUS_3                          65                            62
  CLUS_4                          43                            49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q23.3) MUTATED       40     41     26     72     31
  AMP PEAK  3(1Q23.3) WILD-TYPE     47     19     15     60     43
D3V10, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          40                            47
  CLUS_2                          41                            19
  CLUS_3                          26                            15
  CLUS_4                          72                            60
  CLUS_5                          31                            43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = AMP PEAK  4(2P25.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(2P25.1) MUTATED       36     80     16     19      1
  AMP PEAK  4(2P25.1) WILD-TYPE     42     66    105     42      1
D4V1, multiclass
        clus
vv       AMP PEAK  4(2P25.1) MUTATED AMP PEAK  4(2P25.1) WILD-TYPE
  CLUS_1                          36                            42
  CLUS_2                          80                            66
  CLUS_3                          16                           105
  CLUS_4                          19                            42
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(2P25.1) MUTATED       41     73     15     23
  AMP PEAK  4(2P25.1) WILD-TYPE     97     54     48     57
D4V2, multiclass
        clus
vv       AMP PEAK  4(2P25.1) MUTATED AMP PEAK  4(2P25.1) WILD-TYPE
  CLUS_1                          41                            97
  CLUS_2                          73                            54
  CLUS_3                          15                            48
  CLUS_4                          23                            57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2P25.1) MUTATED       39     42     45
  AMP PEAK  4(2P25.1) WILD-TYPE     83     72     59
D4V3, multiclass
        clus
vv       AMP PEAK  4(2P25.1) MUTATED AMP PEAK  4(2P25.1) WILD-TYPE
  CLUS_1                          39                            83
  CLUS_2                          42                            72
  CLUS_3                          45                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(2P25.1) MUTATED       34     46     38      8
  AMP PEAK  4(2P25.1) WILD-TYPE     56     75     60     23
D4V4, multiclass
        clus
vv       AMP PEAK  4(2P25.1) MUTATED AMP PEAK  4(2P25.1) WILD-TYPE
  CLUS_1                          34                            56
  CLUS_2                          46                            75
  CLUS_3                          38                            60
  CLUS_4                           8                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(2P25.1) MUTATED       25     62      5     31     28
  AMP PEAK  4(2P25.1) WILD-TYPE     47     73     33     72     28
D4V5, multiclass
        clus
vv       AMP PEAK  4(2P25.1) MUTATED AMP PEAK  4(2P25.1) WILD-TYPE
  CLUS_1                          25                            47
  CLUS_2                          62                            73
  CLUS_3                           5                            33
  CLUS_4                          31                            72
  CLUS_5                          28                            28
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2P25.1) MUTATED       64     38     49
  AMP PEAK  4(2P25.1) WILD-TYPE     54     74    125
D4V6, multiclass
        clus
vv       AMP PEAK  4(2P25.1) MUTATED AMP PEAK  4(2P25.1) WILD-TYPE
  CLUS_1                          64                            54
  CLUS_2                          38                            74
  CLUS_3                          49                           125
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(2P25.1) MUTATED       29     39     40     13     29
  AMP PEAK  4(2P25.1) WILD-TYPE     76     35     74     12     58
D4V7, multiclass
        clus
vv       AMP PEAK  4(2P25.1) MUTATED AMP PEAK  4(2P25.1) WILD-TYPE
  CLUS_1                          29                            76
  CLUS_2                          39                            35
  CLUS_3                          40                            74
  CLUS_4                          13                            12
  CLUS_5                          29                            58
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2P25.1) MUTATED       88     43     19
  AMP PEAK  4(2P25.1) WILD-TYPE    178     40     37
D4V8, multiclass
        clus
vv       AMP PEAK  4(2P25.1) MUTATED AMP PEAK  4(2P25.1) WILD-TYPE
  CLUS_1                          88                           178
  CLUS_2                          43                            40
  CLUS_3                          19                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(2P25.1) MUTATED       47     27     48     26
  AMP PEAK  4(2P25.1) WILD-TYPE     77     24     79     66
D4V9, multiclass
        clus
vv       AMP PEAK  4(2P25.1) MUTATED AMP PEAK  4(2P25.1) WILD-TYPE
  CLUS_1                          47                            77
  CLUS_2                          27                            24
  CLUS_3                          48                            79
  CLUS_4                          26                            66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(2P25.1) MUTATED       28     32     20     53     15
  AMP PEAK  4(2P25.1) WILD-TYPE     59     28     21     79     59
D4V10, multiclass
        clus
vv       AMP PEAK  4(2P25.1) MUTATED AMP PEAK  4(2P25.1) WILD-TYPE
  CLUS_1                          28                            59
  CLUS_2                          32                            28
  CLUS_3                          20                            21
  CLUS_4                          53                            79
  CLUS_5                          15                            59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = AMP PEAK  5(3P25.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(3P25.2) MUTATED       52     92     19     26      1
  AMP PEAK  5(3P25.2) WILD-TYPE     26     54    102     35      1
D5V1, multiclass
        clus
vv       AMP PEAK  5(3P25.2) MUTATED AMP PEAK  5(3P25.2) WILD-TYPE
  CLUS_1                          52                            26
  CLUS_2                          92                            54
  CLUS_3                          19                           102
  CLUS_4                          26                            35
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3P25.2) MUTATED       48     87     27     28
  AMP PEAK  5(3P25.2) WILD-TYPE     90     40     36     52
D5V2, multiclass
        clus
vv       AMP PEAK  5(3P25.2) MUTATED AMP PEAK  5(3P25.2) WILD-TYPE
  CLUS_1                          48                            90
  CLUS_2                          87                            40
  CLUS_3                          27                            36
  CLUS_4                          28                            52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3P25.2) MUTATED       47     54     51
  AMP PEAK  5(3P25.2) WILD-TYPE     75     60     53
D5V3, multiclass
        clus
vv       AMP PEAK  5(3P25.2) MUTATED AMP PEAK  5(3P25.2) WILD-TYPE
  CLUS_1                          47                            75
  CLUS_2                          54                            60
  CLUS_3                          51                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3P25.2) MUTATED       42     65     35     10
  AMP PEAK  5(3P25.2) WILD-TYPE     48     56     63     21
D5V4, multiclass
        clus
vv       AMP PEAK  5(3P25.2) MUTATED AMP PEAK  5(3P25.2) WILD-TYPE
  CLUS_1                          42                            48
  CLUS_2                          65                            56
  CLUS_3                          35                            63
  CLUS_4                          10                            21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(3P25.2) MUTATED       35     84      4     32     33
  AMP PEAK  5(3P25.2) WILD-TYPE     37     51     34     71     23
D5V5, multiclass
        clus
vv       AMP PEAK  5(3P25.2) MUTATED AMP PEAK  5(3P25.2) WILD-TYPE
  CLUS_1                          35                            37
  CLUS_2                          84                            51
  CLUS_3                           4                            34
  CLUS_4                          32                            71
  CLUS_5                          33                            23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3P25.2) MUTATED       78     60     50
  AMP PEAK  5(3P25.2) WILD-TYPE     40     52    124
D5V6, multiclass
        clus
vv       AMP PEAK  5(3P25.2) MUTATED AMP PEAK  5(3P25.2) WILD-TYPE
  CLUS_1                          78                            40
  CLUS_2                          60                            52
  CLUS_3                          50                           124
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(3P25.2) MUTATED       36     51     53     13     36
  AMP PEAK  5(3P25.2) WILD-TYPE     69     23     61     12     51
D5V7, multiclass
        clus
vv       AMP PEAK  5(3P25.2) MUTATED AMP PEAK  5(3P25.2) WILD-TYPE
  CLUS_1                          36                            69
  CLUS_2                          51                            23
  CLUS_3                          53                            61
  CLUS_4                          13                            12
  CLUS_5                          36                            51
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3P25.2) MUTATED      105     55     29
  AMP PEAK  5(3P25.2) WILD-TYPE    161     28     27
D5V8, multiclass
        clus
vv       AMP PEAK  5(3P25.2) MUTATED AMP PEAK  5(3P25.2) WILD-TYPE
  CLUS_1                         105                           161
  CLUS_2                          55                            28
  CLUS_3                          29                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3P25.2) MUTATED       55     40     62     28
  AMP PEAK  5(3P25.2) WILD-TYPE     69     11     65     64
D5V9, multiclass
        clus
vv       AMP PEAK  5(3P25.2) MUTATED AMP PEAK  5(3P25.2) WILD-TYPE
  CLUS_1                          55                            69
  CLUS_2                          40                            11
  CLUS_3                          62                            65
  CLUS_4                          28                            64
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(3P25.2) MUTATED       39     43     15     68     20
  AMP PEAK  5(3P25.2) WILD-TYPE     48     17     26     64     54
D5V10, multiclass
        clus
vv       AMP PEAK  5(3P25.2) MUTATED AMP PEAK  5(3P25.2) WILD-TYPE
  CLUS_1                          39                            48
  CLUS_2                          43                            17
  CLUS_3                          15                            26
  CLUS_4                          68                            64
  CLUS_5                          20                            54
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = AMP PEAK  6(3Q26.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(3Q26.33) MUTATED       54     99     33     30      2
  AMP PEAK  6(3Q26.33) WILD-TYPE     24     47     88     31      0
D6V1, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           54                             24
  CLUS_2                           99                             47
  CLUS_3                           33                             88
  CLUS_4                           30                             31
  CLUS_5                            2                              0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3Q26.33) MUTATED       74     70     31     43
  AMP PEAK  6(3Q26.33) WILD-TYPE     64     57     32     37
D6V2, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           74                             64
  CLUS_2                           70                             57
  CLUS_3                           31                             32
  CLUS_4                           43                             37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.33) MUTATED       59     48     68
  AMP PEAK  6(3Q26.33) WILD-TYPE     63     66     36
D6V3, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           59                             63
  CLUS_2                           48                             66
  CLUS_3                           68                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3Q26.33) MUTATED       45     55     59     16
  AMP PEAK  6(3Q26.33) WILD-TYPE     45     66     39     15
D6V4, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           45                             45
  CLUS_2                           55                             66
  CLUS_3                           59                             39
  CLUS_4                           16                             15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(3Q26.33) MUTATED       35     71     16     58     37
  AMP PEAK  6(3Q26.33) WILD-TYPE     37     64     22     45     19
D6V5, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           35                             37
  CLUS_2                           71                             64
  CLUS_3                           16                             22
  CLUS_4                           58                             45
  CLUS_5                           37                             19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.33) MUTATED       74     50     93
  AMP PEAK  6(3Q26.33) WILD-TYPE     44     62     81
D6V6, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           74                             44
  CLUS_2                           50                             62
  CLUS_3                           93                             81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(3Q26.33) MUTATED       58     49     48     17     44
  AMP PEAK  6(3Q26.33) WILD-TYPE     47     25     66      8     43
D6V7, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           58                             47
  CLUS_2                           49                             25
  CLUS_3                           48                             66
  CLUS_4                           17                              8
  CLUS_5                           44                             43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.33) MUTATED      133     50     33
  AMP PEAK  6(3Q26.33) WILD-TYPE    133     33     23
D6V8, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                          133                            133
  CLUS_2                           50                             33
  CLUS_3                           33                             23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3Q26.33) MUTATED       63     32     62     53
  AMP PEAK  6(3Q26.33) WILD-TYPE     61     19     65     39
D6V9, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           63                             61
  CLUS_2                           32                             19
  CLUS_3                           62                             65
  CLUS_4                           53                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(3Q26.33) MUTATED       43     38     28     63     38
  AMP PEAK  6(3Q26.33) WILD-TYPE     44     22     13     69     36
D6V10, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           43                             44
  CLUS_2                           38                             22
  CLUS_3                           28                             13
  CLUS_4                           63                             69
  CLUS_5                           38                             36
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = AMP PEAK  7(4P16.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(4P16.3) MUTATED       18     35     15      6      0
  AMP PEAK  7(4P16.3) WILD-TYPE     60    111    106     55      2
D7V1, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          18                            60
  CLUS_2                          35                           111
  CLUS_3                          15                           106
  CLUS_4                           6                            55
  CLUS_5                           0                             2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(4P16.3) MUTATED       15     30     11     18
  AMP PEAK  7(4P16.3) WILD-TYPE    123     97     52     62
D7V2, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          15                           123
  CLUS_2                          30                            97
  CLUS_3                          11                            52
  CLUS_4                          18                            62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4P16.3) MUTATED       12     29     23
  AMP PEAK  7(4P16.3) WILD-TYPE    110     85     81
D7V3, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          12                           110
  CLUS_2                          29                            85
  CLUS_3                          23                            81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(4P16.3) MUTATED       13     38     10      3
  AMP PEAK  7(4P16.3) WILD-TYPE     77     83     88     28
D7V4, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          13                            77
  CLUS_2                          38                            83
  CLUS_3                          10                            88
  CLUS_4                           3                            28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(4P16.3) MUTATED        7     33     11     14      8
  AMP PEAK  7(4P16.3) WILD-TYPE     65    102     27     89     48
D7V5, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                           7                            65
  CLUS_2                          33                           102
  CLUS_3                          11                            27
  CLUS_4                          14                            89
  CLUS_5                           8                            48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4P16.3) MUTATED       20     35     18
  AMP PEAK  7(4P16.3) WILD-TYPE     98     77    156
D7V6, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          20                            98
  CLUS_2                          35                            77
  CLUS_3                          18                           156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(4P16.3) MUTATED       15     21     30      2      6
  AMP PEAK  7(4P16.3) WILD-TYPE     90     53     84     23     81
D7V7, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          15                            90
  CLUS_2                          21                            53
  CLUS_3                          30                            84
  CLUS_4                           2                            23
  CLUS_5                           6                            81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4P16.3) MUTATED       47     24      3
  AMP PEAK  7(4P16.3) WILD-TYPE    219     59     53
D7V8, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          47                           219
  CLUS_2                          24                            59
  CLUS_3                           3                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(4P16.3) MUTATED       15     11     33     13
  AMP PEAK  7(4P16.3) WILD-TYPE    109     40     94     79
D7V9, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          15                           109
  CLUS_2                          11                            40
  CLUS_3                          33                            94
  CLUS_4                          13                            79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(4P16.3) MUTATED        7     15      4     35     11
  AMP PEAK  7(4P16.3) WILD-TYPE     80     45     37     97     63
D7V10, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                           7                            80
  CLUS_2                          15                            45
  CLUS_3                           4                            37
  CLUS_4                          35                            97
  CLUS_5                          11                            63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = AMP PEAK  8(4Q13.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(4Q13.3) MUTATED       12     41      5      4      0
  AMP PEAK  8(4Q13.3) WILD-TYPE     66    105    116     57      2
D8V1, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          12                            66
  CLUS_2                          41                           105
  CLUS_3                           5                           116
  CLUS_4                           4                            57
  CLUS_5                           0                             2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(4Q13.3) MUTATED       18     28      4     12
  AMP PEAK  8(4Q13.3) WILD-TYPE    120     99     59     68
D8V2, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          18                           120
  CLUS_2                          28                            99
  CLUS_3                           4                            59
  CLUS_4                          12                            68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(4Q13.3) MUTATED       14     21     18
  AMP PEAK  8(4Q13.3) WILD-TYPE    108     93     86
D8V3, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          14                           108
  CLUS_2                          21                            93
  CLUS_3                          18                            86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(4Q13.3) MUTATED       15     22     12      4
  AMP PEAK  8(4Q13.3) WILD-TYPE     75     99     86     27
D8V4, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          15                            75
  CLUS_2                          22                            99
  CLUS_3                          12                            86
  CLUS_4                           4                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(4Q13.3) MUTATED        8     26      3     17      8
  AMP PEAK  8(4Q13.3) WILD-TYPE     64    109     35     86     48
D8V5, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                           8                            64
  CLUS_2                          26                           109
  CLUS_3                           3                            35
  CLUS_4                          17                            86
  CLUS_5                           8                            48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(4Q13.3) MUTATED       18     21     23
  AMP PEAK  8(4Q13.3) WILD-TYPE    100     91    151
D8V6, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          18                           100
  CLUS_2                          21                            91
  CLUS_3                          23                           151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(4Q13.3) MUTATED       14     16     19      6      7
  AMP PEAK  8(4Q13.3) WILD-TYPE     91     58     95     19     80
D8V7, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          14                            91
  CLUS_2                          16                            58
  CLUS_3                          19                            95
  CLUS_4                           6                            19
  CLUS_5                           7                            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(4Q13.3) MUTATED       37     19      6
  AMP PEAK  8(4Q13.3) WILD-TYPE    229     64     50
D8V8, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          37                           229
  CLUS_2                          19                            64
  CLUS_3                           6                            50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(4Q13.3) MUTATED       14      9     27     11
  AMP PEAK  8(4Q13.3) WILD-TYPE    110     42    100     81
D8V9, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          14                           110
  CLUS_2                           9                            42
  CLUS_3                          27                           100
  CLUS_4                          11                            81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(4Q13.3) MUTATED        5     14      8     28      6
  AMP PEAK  8(4Q13.3) WILD-TYPE     82     46     33    104     68
D8V10, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                           5                            82
  CLUS_2                          14                            46
  CLUS_3                           8                            33
  CLUS_4                          28                           104
  CLUS_5                           6                            68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = AMP PEAK  9(5P15.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(5P15.33) MUTATED       50     94     20     40      2
  AMP PEAK  9(5P15.33) WILD-TYPE     28     52    101     21      0
D9V1, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           50                             28
  CLUS_2                           94                             52
  CLUS_3                           20                            101
  CLUS_4                           40                             21
  CLUS_5                            2                              0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(5P15.33) MUTATED       75     67     22     42
  AMP PEAK  9(5P15.33) WILD-TYPE     63     60     41     38
D9V2, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           75                             63
  CLUS_2                           67                             60
  CLUS_3                           22                             41
  CLUS_4                           42                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(5P15.33) MUTATED       63     40     63
  AMP PEAK  9(5P15.33) WILD-TYPE     59     74     41
D9V3, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           63                             59
  CLUS_2                           40                             74
  CLUS_3                           63                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(5P15.33) MUTATED       41     48     58     19
  AMP PEAK  9(5P15.33) WILD-TYPE     49     73     40     12
D9V4, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           41                             49
  CLUS_2                           48                             73
  CLUS_3                           58                             40
  CLUS_4                           19                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(5P15.33) MUTATED       32     61     13     63     34
  AMP PEAK  9(5P15.33) WILD-TYPE     40     74     25     40     22
D9V5, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           32                             40
  CLUS_2                           61                             74
  CLUS_3                           13                             25
  CLUS_4                           63                             40
  CLUS_5                           34                             22
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(5P15.33) MUTATED       50     52    101
  AMP PEAK  9(5P15.33) WILD-TYPE     68     60     73
D9V6, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           50                             68
  CLUS_2                           52                             60
  CLUS_3                          101                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(5P15.33) MUTATED       54     47     42     15     47
  AMP PEAK  9(5P15.33) WILD-TYPE     51     27     72     10     40
D9V7, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           54                             51
  CLUS_2                           47                             27
  CLUS_3                           42                             72
  CLUS_4                           15                             10
  CLUS_5                           47                             40
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(5P15.33) MUTATED      121     51     33
  AMP PEAK  9(5P15.33) WILD-TYPE    145     32     23
D9V8, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                          121                            145
  CLUS_2                           51                             32
  CLUS_3                           33                             23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(5P15.33) MUTATED       58     28     59     57
  AMP PEAK  9(5P15.33) WILD-TYPE     66     23     68     35
D9V9, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           58                             66
  CLUS_2                           28                             23
  CLUS_3                           59                             68
  CLUS_4                           57                             35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(5P15.33) MUTATED       35     35     28     59     45
  AMP PEAK  9(5P15.33) WILD-TYPE     52     25     13     73     29
D9V10, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           35                             52
  CLUS_2                           35                             25
  CLUS_3                           28                             13
  CLUS_4                           59                             73
  CLUS_5                           45                             29
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = AMP PEAK 10(6P22.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(6P22.3) MUTATED       37     82     10     41      1
  AMP PEAK 10(6P22.3) WILD-TYPE     41     64    111     20      1
D10V1, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          37                            41
  CLUS_2                          82                            64
  CLUS_3                          10                           111
  CLUS_4                          41                            20
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6P22.3) MUTATED       56     73     18     24
  AMP PEAK 10(6P22.3) WILD-TYPE     82     54     45     56
D10V2, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          56                            82
  CLUS_2                          73                            54
  CLUS_3                          18                            45
  CLUS_4                          24                            56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6P22.3) MUTATED       41     41     51
  AMP PEAK 10(6P22.3) WILD-TYPE     81     73     53
D10V3, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          41                            81
  CLUS_2                          41                            73
  CLUS_3                          51                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6P22.3) MUTATED       33     47     41     12
  AMP PEAK 10(6P22.3) WILD-TYPE     57     74     57     19
D10V4, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          33                            57
  CLUS_2                          47                            74
  CLUS_3                          41                            57
  CLUS_4                          12                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(6P22.3) MUTATED       21     60      8     48     31
  AMP PEAK 10(6P22.3) WILD-TYPE     51     75     30     55     25
D10V5, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          21                            51
  CLUS_2                          60                            75
  CLUS_3                           8                            30
  CLUS_4                          48                            55
  CLUS_5                          31                            25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6P22.3) MUTATED       54     44     70
  AMP PEAK 10(6P22.3) WILD-TYPE     64     68    104
D10V6, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          54                            64
  CLUS_2                          44                            68
  CLUS_3                          70                           104
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(6P22.3) MUTATED       40     34     53     13     30
  AMP PEAK 10(6P22.3) WILD-TYPE     65     40     61     12     57
D10V7, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          40                            65
  CLUS_2                          34                            40
  CLUS_3                          53                            61
  CLUS_4                          13                            12
  CLUS_5                          30                            57
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6P22.3) MUTATED      106     40     24
  AMP PEAK 10(6P22.3) WILD-TYPE    160     43     32
D10V8, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                         106                           160
  CLUS_2                          40                            43
  CLUS_3                          24                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6P22.3) MUTATED       45     22     59     43
  AMP PEAK 10(6P22.3) WILD-TYPE     79     29     68     49
D10V9, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          45                            79
  CLUS_2                          22                            29
  CLUS_3                          59                            68
  CLUS_4                          43                            49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(6P22.3) MUTATED       29     27     16     62     35
  AMP PEAK 10(6P22.3) WILD-TYPE     58     33     25     70     39
D10V10, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          29                            58
  CLUS_2                          27                            33
  CLUS_3                          16                            25
  CLUS_4                          62                            70
  CLUS_5                          35                            39
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = AMP PEAK 11(6Q21) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(6Q21) MUTATED        5     15      4      9      2
  AMP PEAK 11(6Q21) WILD-TYPE     73    131    117     52      0
D11V1, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         5                          73
  CLUS_2                        15                         131
  CLUS_3                         4                         117
  CLUS_4                         9                          52
  CLUS_5                         2                           0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(6Q21) MUTATED        7     18      5      5
  AMP PEAK 11(6Q21) WILD-TYPE    131    109     58     75
D11V2, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         7                         131
  CLUS_2                        18                         109
  CLUS_3                         5                          58
  CLUS_4                         5                          75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(6Q21) MUTATED        6     11     11
  AMP PEAK 11(6Q21) WILD-TYPE    116    103     93
D11V3, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         6                         116
  CLUS_2                        11                         103
  CLUS_3                        11                          93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(6Q21) MUTATED        4     11     11      2
  AMP PEAK 11(6Q21) WILD-TYPE     86    110     87     29
D11V4, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         4                          86
  CLUS_2                        11                         110
  CLUS_3                        11                          87
  CLUS_4                         2                          29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(6Q21) MUTATED        4     10      2      4     14
  AMP PEAK 11(6Q21) WILD-TYPE     68    125     36     99     42
D11V5, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         4                          68
  CLUS_2                        10                         125
  CLUS_3                         2                          36
  CLUS_4                         4                          99
  CLUS_5                        14                          42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(6Q21) MUTATED       16      8     10
  AMP PEAK 11(6Q21) WILD-TYPE    102    104    164
D11V6, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        16                         102
  CLUS_2                         8                         104
  CLUS_3                        10                         164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(6Q21) MUTATED        9      7     10      4      5
  AMP PEAK 11(6Q21) WILD-TYPE     96     67    104     21     82
D11V7, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         9                          96
  CLUS_2                         7                          67
  CLUS_3                        10                         104
  CLUS_4                         4                          21
  CLUS_5                         5                          82
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(6Q21) MUTATED       23      8      4
  AMP PEAK 11(6Q21) WILD-TYPE    243     75     52
D11V8, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        23                         243
  CLUS_2                         8                          75
  CLUS_3                         4                          52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(6Q21) MUTATED        6      6     13      9
  AMP PEAK 11(6Q21) WILD-TYPE    118     45    114     83
D11V9, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         6                         118
  CLUS_2                         6                          45
  CLUS_3                        13                         114
  CLUS_4                         9                          83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(6Q21) MUTATED        5      6      4     14      5
  AMP PEAK 11(6Q21) WILD-TYPE     82     54     37    118     69
D11V10, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         5                          82
  CLUS_2                         6                          54
  CLUS_3                         4                          37
  CLUS_4                        14                         118
  CLUS_5                         5                          69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = AMP PEAK 12(6Q23.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(6Q23.3) MUTATED        6     21      8      9      2
  AMP PEAK 12(6Q23.3) WILD-TYPE     72    125    113     52      0
D12V1, multiclass
        clus
vv       AMP PEAK 12(6Q23.3) MUTATED AMP PEAK 12(6Q23.3) WILD-TYPE
  CLUS_1                           6                            72
  CLUS_2                          21                           125
  CLUS_3                           8                           113
  CLUS_4                           9                            52
  CLUS_5                           2                             0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(6Q23.3) MUTATED       13     15      6     12
  AMP PEAK 12(6Q23.3) WILD-TYPE    125    112     57     68
D12V2, multiclass
        clus
vv       AMP PEAK 12(6Q23.3) MUTATED AMP PEAK 12(6Q23.3) WILD-TYPE
  CLUS_1                          13                           125
  CLUS_2                          15                           112
  CLUS_3                           6                            57
  CLUS_4                          12                            68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(6Q23.3) MUTATED       11     10     14
  AMP PEAK 12(6Q23.3) WILD-TYPE    111    104     90
D12V3, multiclass
        clus
vv       AMP PEAK 12(6Q23.3) MUTATED AMP PEAK 12(6Q23.3) WILD-TYPE
  CLUS_1                          11                           111
  CLUS_2                          10                           104
  CLUS_3                          14                            90
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(6Q23.3) MUTATED        5     12     14      4
  AMP PEAK 12(6Q23.3) WILD-TYPE     85    109     84     27
D12V4, multiclass
        clus
vv       AMP PEAK 12(6Q23.3) MUTATED AMP PEAK 12(6Q23.3) WILD-TYPE
  CLUS_1                           5                            85
  CLUS_2                          12                           109
  CLUS_3                          14                            84
  CLUS_4                           4                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(6Q23.3) MUTATED        4     16      3      8     14
  AMP PEAK 12(6Q23.3) WILD-TYPE     68    119     35     95     42
D12V5, multiclass
        clus
vv       AMP PEAK 12(6Q23.3) MUTATED AMP PEAK 12(6Q23.3) WILD-TYPE
  CLUS_1                           4                            68
  CLUS_2                          16                           119
  CLUS_3                           3                            35
  CLUS_4                           8                            95
  CLUS_5                          14                            42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(6Q23.3) MUTATED       13     14     18
  AMP PEAK 12(6Q23.3) WILD-TYPE    105     98    156
D12V6, multiclass
        clus
vv       AMP PEAK 12(6Q23.3) MUTATED AMP PEAK 12(6Q23.3) WILD-TYPE
  CLUS_1                          13                           105
  CLUS_2                          14                            98
  CLUS_3                          18                           156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(6Q23.3) MUTATED       14     10     15      3      4
  AMP PEAK 12(6Q23.3) WILD-TYPE     91     64     99     22     83
D12V7, multiclass
        clus
vv       AMP PEAK 12(6Q23.3) MUTATED AMP PEAK 12(6Q23.3) WILD-TYPE
  CLUS_1                          14                            91
  CLUS_2                          10                            64
  CLUS_3                          15                            99
  CLUS_4                           3                            22
  CLUS_5                           4                            83
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(6Q23.3) MUTATED       34     11      1
  AMP PEAK 12(6Q23.3) WILD-TYPE    232     72     55
D12V8, multiclass
        clus
vv       AMP PEAK 12(6Q23.3) MUTATED AMP PEAK 12(6Q23.3) WILD-TYPE
  CLUS_1                          34                           232
  CLUS_2                          11                            72
  CLUS_3                           1                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(6Q23.3) MUTATED        8      8     17     10
  AMP PEAK 12(6Q23.3) WILD-TYPE    116     43    110     82
D12V9, multiclass
        clus
vv       AMP PEAK 12(6Q23.3) MUTATED AMP PEAK 12(6Q23.3) WILD-TYPE
  CLUS_1                           8                           116
  CLUS_2                           8                            43
  CLUS_3                          17                           110
  CLUS_4                          10                            82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(6Q23.3) MUTATED        7     10      1     17      8
  AMP PEAK 12(6Q23.3) WILD-TYPE     80     50     40    115     66
D12V10, multiclass
        clus
vv       AMP PEAK 12(6Q23.3) MUTATED AMP PEAK 12(6Q23.3) WILD-TYPE
  CLUS_1                           7                            80
  CLUS_2                          10                            50
  CLUS_3                           1                            40
  CLUS_4                          17                           115
  CLUS_5                           8                            66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = AMP PEAK 13(7P21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(7P21.1) MUTATED       51     91     17     40      2
  AMP PEAK 13(7P21.1) WILD-TYPE     27     55    104     21      0
D13V1, multiclass
        clus
vv       AMP PEAK 13(7P21.1) MUTATED AMP PEAK 13(7P21.1) WILD-TYPE
  CLUS_1                          51                            27
  CLUS_2                          91                            55
  CLUS_3                          17                           104
  CLUS_4                          40                            21
  CLUS_5                           2                             0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(7P21.1) MUTATED       69     77     23     32
  AMP PEAK 13(7P21.1) WILD-TYPE     69     50     40     48
D13V2, multiclass
        clus
vv       AMP PEAK 13(7P21.1) MUTATED AMP PEAK 13(7P21.1) WILD-TYPE
  CLUS_1                          69                            69
  CLUS_2                          77                            50
  CLUS_3                          23                            40
  CLUS_4                          32                            48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7P21.1) MUTATED       55     48     62
  AMP PEAK 13(7P21.1) WILD-TYPE     67     66     42
D13V3, multiclass
        clus
vv       AMP PEAK 13(7P21.1) MUTATED AMP PEAK 13(7P21.1) WILD-TYPE
  CLUS_1                          55                            67
  CLUS_2                          48                            66
  CLUS_3                          62                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(7P21.1) MUTATED       41     52     58     14
  AMP PEAK 13(7P21.1) WILD-TYPE     49     69     40     17
D13V4, multiclass
        clus
vv       AMP PEAK 13(7P21.1) MUTATED AMP PEAK 13(7P21.1) WILD-TYPE
  CLUS_1                          41                            49
  CLUS_2                          52                            69
  CLUS_3                          58                            40
  CLUS_4                          14                            17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(7P21.1) MUTATED       29     65     12     60     33
  AMP PEAK 13(7P21.1) WILD-TYPE     43     70     26     43     23
D13V5, multiclass
        clus
vv       AMP PEAK 13(7P21.1) MUTATED AMP PEAK 13(7P21.1) WILD-TYPE
  CLUS_1                          29                            43
  CLUS_2                          65                            70
  CLUS_3                          12                            26
  CLUS_4                          60                            43
  CLUS_5                          33                            23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7P21.1) MUTATED       65     43     91
  AMP PEAK 13(7P21.1) WILD-TYPE     53     69     83
D13V6, multiclass
        clus
vv       AMP PEAK 13(7P21.1) MUTATED AMP PEAK 13(7P21.1) WILD-TYPE
  CLUS_1                          65                            53
  CLUS_2                          43                            69
  CLUS_3                          91                            83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(7P21.1) MUTATED       58     42     46     15     38
  AMP PEAK 13(7P21.1) WILD-TYPE     47     32     68     10     49
D13V7, multiclass
        clus
vv       AMP PEAK 13(7P21.1) MUTATED AMP PEAK 13(7P21.1) WILD-TYPE
  CLUS_1                          58                            47
  CLUS_2                          42                            32
  CLUS_3                          46                            68
  CLUS_4                          15                            10
  CLUS_5                          38                            49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7P21.1) MUTATED      126     47     26
  AMP PEAK 13(7P21.1) WILD-TYPE    140     36     30
D13V8, multiclass
        clus
vv       AMP PEAK 13(7P21.1) MUTATED AMP PEAK 13(7P21.1) WILD-TYPE
  CLUS_1                         126                           140
  CLUS_2                          47                            36
  CLUS_3                          26                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(7P21.1) MUTATED       59     26     55     54
  AMP PEAK 13(7P21.1) WILD-TYPE     65     25     72     38
D13V9, multiclass
        clus
vv       AMP PEAK 13(7P21.1) MUTATED AMP PEAK 13(7P21.1) WILD-TYPE
  CLUS_1                          59                            65
  CLUS_2                          26                            25
  CLUS_3                          55                            72
  CLUS_4                          54                            38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(7P21.1) MUTATED       35     31     22     62     44
  AMP PEAK 13(7P21.1) WILD-TYPE     52     29     19     70     30
D13V10, multiclass
        clus
vv       AMP PEAK 13(7P21.1) MUTATED AMP PEAK 13(7P21.1) WILD-TYPE
  CLUS_1                          35                            52
  CLUS_2                          31                            29
  CLUS_3                          22                            19
  CLUS_4                          62                            70
  CLUS_5                          44                            30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = AMP PEAK 14(7P11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(7P11.2) MUTATED       56     80     16     36      2
  AMP PEAK 14(7P11.2) WILD-TYPE     22     66    105     25      0
D14V1, multiclass
        clus
vv       AMP PEAK 14(7P11.2) MUTATED AMP PEAK 14(7P11.2) WILD-TYPE
  CLUS_1                          56                            22
  CLUS_2                          80                            66
  CLUS_3                          16                           105
  CLUS_4                          36                            25
  CLUS_5                           2                             0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(7P11.2) MUTATED       67     71     20     32
  AMP PEAK 14(7P11.2) WILD-TYPE     71     56     43     48
D14V2, multiclass
        clus
vv       AMP PEAK 14(7P11.2) MUTATED AMP PEAK 14(7P11.2) WILD-TYPE
  CLUS_1                          67                            71
  CLUS_2                          71                            56
  CLUS_3                          20                            43
  CLUS_4                          32                            48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(7P11.2) MUTATED       51     43     63
  AMP PEAK 14(7P11.2) WILD-TYPE     71     71     41
D14V3, multiclass
        clus
vv       AMP PEAK 14(7P11.2) MUTATED AMP PEAK 14(7P11.2) WILD-TYPE
  CLUS_1                          51                            71
  CLUS_2                          43                            71
  CLUS_3                          63                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(7P11.2) MUTATED       39     51     54     13
  AMP PEAK 14(7P11.2) WILD-TYPE     51     70     44     18
D14V4, multiclass
        clus
vv       AMP PEAK 14(7P11.2) MUTATED AMP PEAK 14(7P11.2) WILD-TYPE
  CLUS_1                          39                            51
  CLUS_2                          51                            70
  CLUS_3                          54                            44
  CLUS_4                          13                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(7P11.2) MUTATED       29     60     12     56     31
  AMP PEAK 14(7P11.2) WILD-TYPE     43     75     26     47     25
D14V5, multiclass
        clus
vv       AMP PEAK 14(7P11.2) MUTATED AMP PEAK 14(7P11.2) WILD-TYPE
  CLUS_1                          29                            43
  CLUS_2                          60                            75
  CLUS_3                          12                            26
  CLUS_4                          56                            47
  CLUS_5                          31                            25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(7P11.2) MUTATED       56     45     87
  AMP PEAK 14(7P11.2) WILD-TYPE     62     67     87
D14V6, multiclass
        clus
vv       AMP PEAK 14(7P11.2) MUTATED AMP PEAK 14(7P11.2) WILD-TYPE
  CLUS_1                          56                            62
  CLUS_2                          45                            67
  CLUS_3                          87                            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(7P11.2) MUTATED       58     37     45     14     35
  AMP PEAK 14(7P11.2) WILD-TYPE     47     37     69     11     52
D14V7, multiclass
        clus
vv       AMP PEAK 14(7P11.2) MUTATED AMP PEAK 14(7P11.2) WILD-TYPE
  CLUS_1                          58                            47
  CLUS_2                          37                            37
  CLUS_3                          45                            69
  CLUS_4                          14                            11
  CLUS_5                          35                            52
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(7P11.2) MUTATED      123     42     24
  AMP PEAK 14(7P11.2) WILD-TYPE    143     41     32
D14V8, multiclass
        clus
vv       AMP PEAK 14(7P11.2) MUTATED AMP PEAK 14(7P11.2) WILD-TYPE
  CLUS_1                         123                           143
  CLUS_2                          42                            41
  CLUS_3                          24                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(7P11.2) MUTATED       55     25     51     53
  AMP PEAK 14(7P11.2) WILD-TYPE     69     26     76     39
D14V9, multiclass
        clus
vv       AMP PEAK 14(7P11.2) MUTATED AMP PEAK 14(7P11.2) WILD-TYPE
  CLUS_1                          55                            69
  CLUS_2                          25                            26
  CLUS_3                          51                            76
  CLUS_4                          53                            39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(7P11.2) MUTATED       33     29     20     58     44
  AMP PEAK 14(7P11.2) WILD-TYPE     54     31     21     74     30
D14V10, multiclass
        clus
vv       AMP PEAK 14(7P11.2) MUTATED AMP PEAK 14(7P11.2) WILD-TYPE
  CLUS_1                          33                            54
  CLUS_2                          29                            31
  CLUS_3                          20                            21
  CLUS_4                          58                            74
  CLUS_5                          44                            30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = AMP PEAK 15(8P11.23) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(8P11.23) MUTATED       62     30     20     10      2
  AMP PEAK 15(8P11.23) WILD-TYPE     16    116    101     51      0
D15V1, multiclass
        clus
vv       AMP PEAK 15(8P11.23) MUTATED AMP PEAK 15(8P11.23) WILD-TYPE
  CLUS_1                           62                             16
  CLUS_2                           30                            116
  CLUS_3                           20                            101
  CLUS_4                           10                             51
  CLUS_5                            2                              0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8P11.23) MUTATED       36     43     12     33
  AMP PEAK 15(8P11.23) WILD-TYPE    102     84     51     47
D15V2, multiclass
        clus
vv       AMP PEAK 15(8P11.23) MUTATED AMP PEAK 15(8P11.23) WILD-TYPE
  CLUS_1                           36                            102
  CLUS_2                           43                             84
  CLUS_3                           12                             51
  CLUS_4                           33                             47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8P11.23) MUTATED       35     32     36
  AMP PEAK 15(8P11.23) WILD-TYPE     87     82     68
D15V3, multiclass
        clus
vv       AMP PEAK 15(8P11.23) MUTATED AMP PEAK 15(8P11.23) WILD-TYPE
  CLUS_1                           35                             87
  CLUS_2                           32                             82
  CLUS_3                           36                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8P11.23) MUTATED       28     38     32      5
  AMP PEAK 15(8P11.23) WILD-TYPE     62     83     66     26
D15V4, multiclass
        clus
vv       AMP PEAK 15(8P11.23) MUTATED AMP PEAK 15(8P11.23) WILD-TYPE
  CLUS_1                           28                             62
  CLUS_2                           38                             83
  CLUS_3                           32                             66
  CLUS_4                            5                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(8P11.23) MUTATED       19     39     17     28     19
  AMP PEAK 15(8P11.23) WILD-TYPE     53     96     21     75     37
D15V5, multiclass
        clus
vv       AMP PEAK 15(8P11.23) MUTATED AMP PEAK 15(8P11.23) WILD-TYPE
  CLUS_1                           19                             53
  CLUS_2                           39                             96
  CLUS_3                           17                             21
  CLUS_4                           28                             75
  CLUS_5                           19                             37
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8P11.23) MUTATED       43     32     47
  AMP PEAK 15(8P11.23) WILD-TYPE     75     80    127
D15V6, multiclass
        clus
vv       AMP PEAK 15(8P11.23) MUTATED AMP PEAK 15(8P11.23) WILD-TYPE
  CLUS_1                           43                             75
  CLUS_2                           32                             80
  CLUS_3                           47                            127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(8P11.23) MUTATED       33     23     34     12     21
  AMP PEAK 15(8P11.23) WILD-TYPE     72     51     80     13     66
D15V7, multiclass
        clus
vv       AMP PEAK 15(8P11.23) MUTATED AMP PEAK 15(8P11.23) WILD-TYPE
  CLUS_1                           33                             72
  CLUS_2                           23                             51
  CLUS_3                           34                             80
  CLUS_4                           12                             13
  CLUS_5                           21                             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8P11.23) MUTATED       84     26     13
  AMP PEAK 15(8P11.23) WILD-TYPE    182     57     43
D15V8, multiclass
        clus
vv       AMP PEAK 15(8P11.23) MUTATED AMP PEAK 15(8P11.23) WILD-TYPE
  CLUS_1                           84                            182
  CLUS_2                           26                             57
  CLUS_3                           13                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8P11.23) MUTATED       39     16     41     25
  AMP PEAK 15(8P11.23) WILD-TYPE     85     35     86     67
D15V9, multiclass
        clus
vv       AMP PEAK 15(8P11.23) MUTATED AMP PEAK 15(8P11.23) WILD-TYPE
  CLUS_1                           39                             85
  CLUS_2                           16                             35
  CLUS_3                           41                             86
  CLUS_4                           25                             67
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(8P11.23) MUTATED       27     15     13     44     22
  AMP PEAK 15(8P11.23) WILD-TYPE     60     45     28     88     52
D15V10, multiclass
        clus
vv       AMP PEAK 15(8P11.23) MUTATED AMP PEAK 15(8P11.23) WILD-TYPE
  CLUS_1                           27                             60
  CLUS_2                           15                             45
  CLUS_3                           13                             28
  CLUS_4                           44                             88
  CLUS_5                           22                             52
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = AMP PEAK 16(8P11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(8P11.21) MUTATED       64     41     18     16      1
  AMP PEAK 16(8P11.21) WILD-TYPE     14    105    103     45      1
D16V1, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           64                             14
  CLUS_2                           41                            105
  CLUS_3                           18                            103
  CLUS_4                           16                             45
  CLUS_5                            1                              1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8P11.21) MUTATED       40     56     11     33
  AMP PEAK 16(8P11.21) WILD-TYPE     98     71     52     47
D16V2, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           40                             98
  CLUS_2                           56                             71
  CLUS_3                           11                             52
  CLUS_4                           33                             47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8P11.21) MUTATED       37     32     43
  AMP PEAK 16(8P11.21) WILD-TYPE     85     82     61
D16V3, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           37                             85
  CLUS_2                           32                             82
  CLUS_3                           43                             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8P11.21) MUTATED       30     43     32      7
  AMP PEAK 16(8P11.21) WILD-TYPE     60     78     66     24
D16V4, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           30                             60
  CLUS_2                           43                             78
  CLUS_3                           32                             66
  CLUS_4                            7                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(8P11.21) MUTATED       19     48     17     32     22
  AMP PEAK 16(8P11.21) WILD-TYPE     53     87     21     71     34
D16V5, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           19                             53
  CLUS_2                           48                             87
  CLUS_3                           17                             21
  CLUS_4                           32                             71
  CLUS_5                           22                             34
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8P11.21) MUTATED       47     36     55
  AMP PEAK 16(8P11.21) WILD-TYPE     71     76    119
D16V6, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           47                             71
  CLUS_2                           36                             76
  CLUS_3                           55                            119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(8P11.21) MUTATED       39     26     41      8     25
  AMP PEAK 16(8P11.21) WILD-TYPE     66     48     73     17     62
D16V7, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           39                             66
  CLUS_2                           26                             48
  CLUS_3                           41                             73
  CLUS_4                            8                             17
  CLUS_5                           25                             62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8P11.21) MUTATED       99     29     11
  AMP PEAK 16(8P11.21) WILD-TYPE    167     54     45
D16V8, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           99                            167
  CLUS_2                           29                             54
  CLUS_3                           11                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8P11.21) MUTATED       37     20     47     31
  AMP PEAK 16(8P11.21) WILD-TYPE     87     31     80     61
D16V9, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           37                             87
  CLUS_2                           20                             31
  CLUS_3                           47                             80
  CLUS_4                           31                             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(8P11.21) MUTATED       27     18     11     52     27
  AMP PEAK 16(8P11.21) WILD-TYPE     60     42     30     80     47
D16V10, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           27                             60
  CLUS_2                           18                             42
  CLUS_3                           11                             30
  CLUS_4                           52                             80
  CLUS_5                           27                             47
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = AMP PEAK 17(8Q22.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(8Q22.3) MUTATED       68    111     45     39      1
  AMP PEAK 17(8Q22.3) WILD-TYPE     10     35     76     22      1
D17V1, multiclass
        clus
vv       AMP PEAK 17(8Q22.3) MUTATED AMP PEAK 17(8Q22.3) WILD-TYPE
  CLUS_1                          68                            10
  CLUS_2                         111                            35
  CLUS_3                          45                            76
  CLUS_4                          39                            22
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(8Q22.3) MUTATED       82    101     30     51
  AMP PEAK 17(8Q22.3) WILD-TYPE     56     26     33     29
D17V2, multiclass
        clus
vv       AMP PEAK 17(8Q22.3) MUTATED AMP PEAK 17(8Q22.3) WILD-TYPE
  CLUS_1                          82                            56
  CLUS_2                         101                            26
  CLUS_3                          30                            33
  CLUS_4                          51                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(8Q22.3) MUTATED       75     66     79
  AMP PEAK 17(8Q22.3) WILD-TYPE     47     48     25
D17V3, multiclass
        clus
vv       AMP PEAK 17(8Q22.3) MUTATED AMP PEAK 17(8Q22.3) WILD-TYPE
  CLUS_1                          75                            47
  CLUS_2                          66                            48
  CLUS_3                          79                            25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(8Q22.3) MUTATED       57     76     65     22
  AMP PEAK 17(8Q22.3) WILD-TYPE     33     45     33      9
D17V4, multiclass
        clus
vv       AMP PEAK 17(8Q22.3) MUTATED AMP PEAK 17(8Q22.3) WILD-TYPE
  CLUS_1                          57                            33
  CLUS_2                          76                            45
  CLUS_3                          65                            33
  CLUS_4                          22                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(8Q22.3) MUTATED       42     90     23     65     41
  AMP PEAK 17(8Q22.3) WILD-TYPE     30     45     15     38     15
D17V5, multiclass
        clus
vv       AMP PEAK 17(8Q22.3) MUTATED AMP PEAK 17(8Q22.3) WILD-TYPE
  CLUS_1                          42                            30
  CLUS_2                          90                            45
  CLUS_3                          23                            15
  CLUS_4                          65                            38
  CLUS_5                          41                            15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(8Q22.3) MUTATED       83     72    106
  AMP PEAK 17(8Q22.3) WILD-TYPE     35     40     68
D17V6, multiclass
        clus
vv       AMP PEAK 17(8Q22.3) MUTATED AMP PEAK 17(8Q22.3) WILD-TYPE
  CLUS_1                          83                            35
  CLUS_2                          72                            40
  CLUS_3                         106                            68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(8Q22.3) MUTATED       66     56     71     19     50
  AMP PEAK 17(8Q22.3) WILD-TYPE     39     18     43      6     37
D17V7, multiclass
        clus
vv       AMP PEAK 17(8Q22.3) MUTATED AMP PEAK 17(8Q22.3) WILD-TYPE
  CLUS_1                          66                            39
  CLUS_2                          56                            18
  CLUS_3                          71                            43
  CLUS_4                          19                             6
  CLUS_5                          50                            37
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(8Q22.3) MUTATED      170     62     30
  AMP PEAK 17(8Q22.3) WILD-TYPE     96     21     26
D17V8, multiclass
        clus
vv       AMP PEAK 17(8Q22.3) MUTATED AMP PEAK 17(8Q22.3) WILD-TYPE
  CLUS_1                         170                            96
  CLUS_2                          62                            21
  CLUS_3                          30                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(8Q22.3) MUTATED       75     42     83     57
  AMP PEAK 17(8Q22.3) WILD-TYPE     49      9     44     35
D17V9, multiclass
        clus
vv       AMP PEAK 17(8Q22.3) MUTATED AMP PEAK 17(8Q22.3) WILD-TYPE
  CLUS_1                          75                            49
  CLUS_2                          42                             9
  CLUS_3                          83                            44
  CLUS_4                          57                            35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(8Q22.3) MUTATED       51     46     24     88     48
  AMP PEAK 17(8Q22.3) WILD-TYPE     36     14     17     44     26
D17V10, multiclass
        clus
vv       AMP PEAK 17(8Q22.3) MUTATED AMP PEAK 17(8Q22.3) WILD-TYPE
  CLUS_1                          51                            36
  CLUS_2                          46                            14
  CLUS_3                          24                            17
  CLUS_4                          88                            44
  CLUS_5                          48                            26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = AMP PEAK 18(8Q24.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(8Q24.21) MUTATED       65    107     43     37      2
  AMP PEAK 18(8Q24.21) WILD-TYPE     13     39     78     24      0
D18V1, multiclass
        clus
vv       AMP PEAK 18(8Q24.21) MUTATED AMP PEAK 18(8Q24.21) WILD-TYPE
  CLUS_1                           65                             13
  CLUS_2                          107                             39
  CLUS_3                           43                             78
  CLUS_4                           37                             24
  CLUS_5                            2                              0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(8Q24.21) MUTATED       82     93     28     51
  AMP PEAK 18(8Q24.21) WILD-TYPE     56     34     35     29
D18V2, multiclass
        clus
vv       AMP PEAK 18(8Q24.21) MUTATED AMP PEAK 18(8Q24.21) WILD-TYPE
  CLUS_1                           82                             56
  CLUS_2                           93                             34
  CLUS_3                           28                             35
  CLUS_4                           51                             29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(8Q24.21) MUTATED       71     59     80
  AMP PEAK 18(8Q24.21) WILD-TYPE     51     55     24
D18V3, multiclass
        clus
vv       AMP PEAK 18(8Q24.21) MUTATED AMP PEAK 18(8Q24.21) WILD-TYPE
  CLUS_1                           71                             51
  CLUS_2                           59                             55
  CLUS_3                           80                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(8Q24.21) MUTATED       52     69     66     23
  AMP PEAK 18(8Q24.21) WILD-TYPE     38     52     32      8
D18V4, multiclass
        clus
vv       AMP PEAK 18(8Q24.21) MUTATED AMP PEAK 18(8Q24.21) WILD-TYPE
  CLUS_1                           52                             38
  CLUS_2                           69                             52
  CLUS_3                           66                             32
  CLUS_4                           23                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(8Q24.21) MUTATED       40     82     22     67     40
  AMP PEAK 18(8Q24.21) WILD-TYPE     32     53     16     36     16
D18V5, multiclass
        clus
vv       AMP PEAK 18(8Q24.21) MUTATED AMP PEAK 18(8Q24.21) WILD-TYPE
  CLUS_1                           40                             32
  CLUS_2                           82                             53
  CLUS_3                           22                             16
  CLUS_4                           67                             36
  CLUS_5                           40                             16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(8Q24.21) MUTATED       75     66    110
  AMP PEAK 18(8Q24.21) WILD-TYPE     43     46     64
D18V6, multiclass
        clus
vv       AMP PEAK 18(8Q24.21) MUTATED AMP PEAK 18(8Q24.21) WILD-TYPE
  CLUS_1                           75                             43
  CLUS_2                           66                             46
  CLUS_3                          110                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(8Q24.21) MUTATED       70     53     66     18     45
  AMP PEAK 18(8Q24.21) WILD-TYPE     35     21     48      7     42
D18V7, multiclass
        clus
vv       AMP PEAK 18(8Q24.21) MUTATED AMP PEAK 18(8Q24.21) WILD-TYPE
  CLUS_1                           70                             35
  CLUS_2                           53                             21
  CLUS_3                           66                             48
  CLUS_4                           18                              7
  CLUS_5                           45                             42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(8Q24.21) MUTATED      167     59     26
  AMP PEAK 18(8Q24.21) WILD-TYPE     99     24     30
D18V8, multiclass
        clus
vv       AMP PEAK 18(8Q24.21) MUTATED AMP PEAK 18(8Q24.21) WILD-TYPE
  CLUS_1                          167                             99
  CLUS_2                           59                             24
  CLUS_3                           26                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(8Q24.21) MUTATED       70     37     79     61
  AMP PEAK 18(8Q24.21) WILD-TYPE     54     14     48     31
D18V9, multiclass
        clus
vv       AMP PEAK 18(8Q24.21) MUTATED AMP PEAK 18(8Q24.21) WILD-TYPE
  CLUS_1                           70                             54
  CLUS_2                           37                             14
  CLUS_3                           79                             48
  CLUS_4                           61                             31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(8Q24.21) MUTATED       47     40     23     86     51
  AMP PEAK 18(8Q24.21) WILD-TYPE     40     20     18     46     23
D18V10, multiclass
        clus
vv       AMP PEAK 18(8Q24.21) MUTATED AMP PEAK 18(8Q24.21) WILD-TYPE
  CLUS_1                           47                             40
  CLUS_2                           40                             20
  CLUS_3                           23                             18
  CLUS_4                           86                             46
  CLUS_5                           51                             23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = AMP PEAK 19(9P24.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(9P24.1) MUTATED       23     20     10     34      1
  AMP PEAK 19(9P24.1) WILD-TYPE     55    126    111     27      1
D19V1, multiclass
        clus
vv       AMP PEAK 19(9P24.1) MUTATED AMP PEAK 19(9P24.1) WILD-TYPE
  CLUS_1                          23                            55
  CLUS_2                          20                           126
  CLUS_3                          10                           111
  CLUS_4                          34                            27
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(9P24.1) MUTATED       44     21      8     15
  AMP PEAK 19(9P24.1) WILD-TYPE     94    106     55     65
D19V2, multiclass
        clus
vv       AMP PEAK 19(9P24.1) MUTATED AMP PEAK 19(9P24.1) WILD-TYPE
  CLUS_1                          44                            94
  CLUS_2                          21                           106
  CLUS_3                           8                            55
  CLUS_4                          15                            65
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(9P24.1) MUTATED       34     16     24
  AMP PEAK 19(9P24.1) WILD-TYPE     88     98     80
D19V3, multiclass
        clus
vv       AMP PEAK 19(9P24.1) MUTATED AMP PEAK 19(9P24.1) WILD-TYPE
  CLUS_1                          34                            88
  CLUS_2                          16                            98
  CLUS_3                          24                            80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(9P24.1) MUTATED       19     16     28     11
  AMP PEAK 19(9P24.1) WILD-TYPE     71    105     70     20
D19V4, multiclass
        clus
vv       AMP PEAK 19(9P24.1) MUTATED AMP PEAK 19(9P24.1) WILD-TYPE
  CLUS_1                          19                            71
  CLUS_2                          16                           105
  CLUS_3                          28                            70
  CLUS_4                          11                            20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(9P24.1) MUTATED       14     24      3     32     13
  AMP PEAK 19(9P24.1) WILD-TYPE     58    111     35     71     43
D19V5, multiclass
        clus
vv       AMP PEAK 19(9P24.1) MUTATED AMP PEAK 19(9P24.1) WILD-TYPE
  CLUS_1                          14                            58
  CLUS_2                          24                           111
  CLUS_3                           3                            35
  CLUS_4                          32                            71
  CLUS_5                          13                            43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(9P24.1) MUTATED       21     14     51
  AMP PEAK 19(9P24.1) WILD-TYPE     97     98    123
D19V6, multiclass
        clus
vv       AMP PEAK 19(9P24.1) MUTATED AMP PEAK 19(9P24.1) WILD-TYPE
  CLUS_1                          21                            97
  CLUS_2                          14                            98
  CLUS_3                          51                           123
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(9P24.1) MUTATED       36     12     17      6     17
  AMP PEAK 19(9P24.1) WILD-TYPE     69     62     97     19     70
D19V7, multiclass
        clus
vv       AMP PEAK 19(9P24.1) MUTATED AMP PEAK 19(9P24.1) WILD-TYPE
  CLUS_1                          36                            69
  CLUS_2                          12                            62
  CLUS_3                          17                            97
  CLUS_4                           6                            19
  CLUS_5                          17                            70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(9P24.1) MUTATED       61     14     13
  AMP PEAK 19(9P24.1) WILD-TYPE    205     69     43
D19V8, multiclass
        clus
vv       AMP PEAK 19(9P24.1) MUTATED AMP PEAK 19(9P24.1) WILD-TYPE
  CLUS_1                          61                           205
  CLUS_2                          14                            69
  CLUS_3                          13                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(9P24.1) MUTATED       22      9     18     36
  AMP PEAK 19(9P24.1) WILD-TYPE    102     42    109     56
D19V9, multiclass
        clus
vv       AMP PEAK 19(9P24.1) MUTATED AMP PEAK 19(9P24.1) WILD-TYPE
  CLUS_1                          22                           102
  CLUS_2                           9                            42
  CLUS_3                          18                           109
  CLUS_4                          36                            56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(9P24.1) MUTATED       18     10      6     21     30
  AMP PEAK 19(9P24.1) WILD-TYPE     69     50     35    111     44
D19V10, multiclass
        clus
vv       AMP PEAK 19(9P24.1) MUTATED AMP PEAK 19(9P24.1) WILD-TYPE
  CLUS_1                          18                            69
  CLUS_2                          10                            50
  CLUS_3                           6                            35
  CLUS_4                          21                           111
  CLUS_5                          30                            44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = AMP PEAK 20(10P14) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(10P14) MUTATED       45     89     12     36      0
  AMP PEAK 20(10P14) WILD-TYPE     33     57    109     25      2
D20V1, multiclass
        clus
vv       AMP PEAK 20(10P14) MUTATED AMP PEAK 20(10P14) WILD-TYPE
  CLUS_1                         45                           33
  CLUS_2                         89                           57
  CLUS_3                         12                          109
  CLUS_4                         36                           25
  CLUS_5                          0                            2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(10P14) MUTATED       55     81     22     24
  AMP PEAK 20(10P14) WILD-TYPE     83     46     41     56
D20V2, multiclass
        clus
vv       AMP PEAK 20(10P14) MUTATED AMP PEAK 20(10P14) WILD-TYPE
  CLUS_1                         55                           83
  CLUS_2                         81                           46
  CLUS_3                         22                           41
  CLUS_4                         24                           56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(10P14) MUTATED       54     48     55
  AMP PEAK 20(10P14) WILD-TYPE     68     66     49
D20V3, multiclass
        clus
vv       AMP PEAK 20(10P14) MUTATED AMP PEAK 20(10P14) WILD-TYPE
  CLUS_1                         54                           68
  CLUS_2                         48                           66
  CLUS_3                         55                           49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(10P14) MUTATED       47     51     49     10
  AMP PEAK 20(10P14) WILD-TYPE     43     70     49     21
D20V4, multiclass
        clus
vv       AMP PEAK 20(10P14) MUTATED AMP PEAK 20(10P14) WILD-TYPE
  CLUS_1                         47                           43
  CLUS_2                         51                           70
  CLUS_3                         49                           49
  CLUS_4                         10                           21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(10P14) MUTATED       33     63      7     45     32
  AMP PEAK 20(10P14) WILD-TYPE     39     72     31     58     24
D20V5, multiclass
        clus
vv       AMP PEAK 20(10P14) MUTATED AMP PEAK 20(10P14) WILD-TYPE
  CLUS_1                         33                           39
  CLUS_2                         63                           72
  CLUS_3                          7                           31
  CLUS_4                         45                           58
  CLUS_5                         32                           24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(10P14) MUTATED       73     39     68
  AMP PEAK 20(10P14) WILD-TYPE     45     73    106
D20V6, multiclass
        clus
vv       AMP PEAK 20(10P14) MUTATED AMP PEAK 20(10P14) WILD-TYPE
  CLUS_1                         73                           45
  CLUS_2                         39                           73
  CLUS_3                         68                          106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(10P14) MUTATED       41     41     47     14     38
  AMP PEAK 20(10P14) WILD-TYPE     64     33     67     11     49
D20V7, multiclass
        clus
vv       AMP PEAK 20(10P14) MUTATED AMP PEAK 20(10P14) WILD-TYPE
  CLUS_1                         41                           64
  CLUS_2                         41                           33
  CLUS_3                         47                           67
  CLUS_4                         14                           11
  CLUS_5                         38                           49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(10P14) MUTATED      109     46     26
  AMP PEAK 20(10P14) WILD-TYPE    157     37     30
D20V8, multiclass
        clus
vv       AMP PEAK 20(10P14) MUTATED AMP PEAK 20(10P14) WILD-TYPE
  CLUS_1                        109                          157
  CLUS_2                         46                           37
  CLUS_3                         26                           30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(10P14) MUTATED       57     28     53     38
  AMP PEAK 20(10P14) WILD-TYPE     67     23     74     54
D20V9, multiclass
        clus
vv       AMP PEAK 20(10P14) MUTATED AMP PEAK 20(10P14) WILD-TYPE
  CLUS_1                         57                           67
  CLUS_2                         28                           23
  CLUS_3                         53                           74
  CLUS_4                         38                           54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(10P14) MUTATED       37     34     21     57     27
  AMP PEAK 20(10P14) WILD-TYPE     50     26     20     75     47
D20V10, multiclass
        clus
vv       AMP PEAK 20(10P14) MUTATED AMP PEAK 20(10P14) WILD-TYPE
  CLUS_1                         37                           50
  CLUS_2                         34                           26
  CLUS_3                         21                           20
  CLUS_4                         57                           75
  CLUS_5                         27                           47
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = AMP PEAK 21(11P13) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(11P13) MUTATED       12     15      3     20      1
  AMP PEAK 21(11P13) WILD-TYPE     66    131    118     41      1
D21V1, multiclass
        clus
vv       AMP PEAK 21(11P13) MUTATED AMP PEAK 21(11P13) WILD-TYPE
  CLUS_1                         12                           66
  CLUS_2                         15                          131
  CLUS_3                          3                          118
  CLUS_4                         20                           41
  CLUS_5                          1                            1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(11P13) MUTATED       25     19      4      3
  AMP PEAK 21(11P13) WILD-TYPE    113    108     59     77
D21V2, multiclass
        clus
vv       AMP PEAK 21(11P13) MUTATED AMP PEAK 21(11P13) WILD-TYPE
  CLUS_1                         25                          113
  CLUS_2                         19                          108
  CLUS_3                          4                           59
  CLUS_4                          3                           77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(11P13) MUTATED       22      5     18
  AMP PEAK 21(11P13) WILD-TYPE    100    109     86
D21V3, multiclass
        clus
vv       AMP PEAK 21(11P13) MUTATED AMP PEAK 21(11P13) WILD-TYPE
  CLUS_1                         22                          100
  CLUS_2                          5                          109
  CLUS_3                         18                           86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(11P13) MUTATED       14      8     17      6
  AMP PEAK 21(11P13) WILD-TYPE     76    113     81     25
D21V4, multiclass
        clus
vv       AMP PEAK 21(11P13) MUTATED AMP PEAK 21(11P13) WILD-TYPE
  CLUS_1                         14                           76
  CLUS_2                          8                          113
  CLUS_3                         17                           81
  CLUS_4                          6                           25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(11P13) MUTATED        9      9      3     20     10
  AMP PEAK 21(11P13) WILD-TYPE     63    126     35     83     46
D21V5, multiclass
        clus
vv       AMP PEAK 21(11P13) MUTATED AMP PEAK 21(11P13) WILD-TYPE
  CLUS_1                          9                           63
  CLUS_2                          9                          126
  CLUS_3                          3                           35
  CLUS_4                         20                           83
  CLUS_5                         10                           46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(11P13) MUTATED       16      4     31
  AMP PEAK 21(11P13) WILD-TYPE    102    108    143
D21V6, multiclass
        clus
vv       AMP PEAK 21(11P13) MUTATED AMP PEAK 21(11P13) WILD-TYPE
  CLUS_1                         16                          102
  CLUS_2                          4                          108
  CLUS_3                         31                          143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(11P13) MUTATED       19      7      5      8     12
  AMP PEAK 21(11P13) WILD-TYPE     86     67    109     17     75
D21V7, multiclass
        clus
vv       AMP PEAK 21(11P13) MUTATED AMP PEAK 21(11P13) WILD-TYPE
  CLUS_1                         19                           86
  CLUS_2                          7                           67
  CLUS_3                          5                          109
  CLUS_4                          8                           17
  CLUS_5                         12                           75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(11P13) MUTATED       36      8      7
  AMP PEAK 21(11P13) WILD-TYPE    230     75     49
D21V8, multiclass
        clus
vv       AMP PEAK 21(11P13) MUTATED AMP PEAK 21(11P13) WILD-TYPE
  CLUS_1                         36                          230
  CLUS_2                          8                           75
  CLUS_3                          7                           49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(11P13) MUTATED       16      4     11     20
  AMP PEAK 21(11P13) WILD-TYPE    108     47    116     72
D21V9, multiclass
        clus
vv       AMP PEAK 21(11P13) MUTATED AMP PEAK 21(11P13) WILD-TYPE
  CLUS_1                         16                          108
  CLUS_2                          4                           47
  CLUS_3                         11                          116
  CLUS_4                         20                           72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(11P13) MUTATED       10      4      7      9     21
  AMP PEAK 21(11P13) WILD-TYPE     77     56     34    123     53
D21V10, multiclass
        clus
vv       AMP PEAK 21(11P13) MUTATED AMP PEAK 21(11P13) WILD-TYPE
  CLUS_1                         10                           77
  CLUS_2                          4                           56
  CLUS_3                          7                           34
  CLUS_4                          9                          123
  CLUS_5                         21                           53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = AMP PEAK 22(11Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(11Q13.3) MUTATED       33     62     21     18      1
  AMP PEAK 22(11Q13.3) WILD-TYPE     45     84    100     43      1
D22V1, multiclass
        clus
vv       AMP PEAK 22(11Q13.3) MUTATED AMP PEAK 22(11Q13.3) WILD-TYPE
  CLUS_1                           33                             45
  CLUS_2                           62                             84
  CLUS_3                           21                            100
  CLUS_4                           18                             43
  CLUS_5                            1                              1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(11Q13.3) MUTATED       41     49     15     30
  AMP PEAK 22(11Q13.3) WILD-TYPE     97     78     48     50
D22V2, multiclass
        clus
vv       AMP PEAK 22(11Q13.3) MUTATED AMP PEAK 22(11Q13.3) WILD-TYPE
  CLUS_1                           41                             97
  CLUS_2                           49                             78
  CLUS_3                           15                             48
  CLUS_4                           30                             50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(11Q13.3) MUTATED       40     42     35
  AMP PEAK 22(11Q13.3) WILD-TYPE     82     72     69
D22V3, multiclass
        clus
vv       AMP PEAK 22(11Q13.3) MUTATED AMP PEAK 22(11Q13.3) WILD-TYPE
  CLUS_1                           40                             82
  CLUS_2                           42                             72
  CLUS_3                           35                             69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(11Q13.3) MUTATED       29     47     26     15
  AMP PEAK 22(11Q13.3) WILD-TYPE     61     74     72     16
D22V4, multiclass
        clus
vv       AMP PEAK 22(11Q13.3) MUTATED AMP PEAK 22(11Q13.3) WILD-TYPE
  CLUS_1                           29                             61
  CLUS_2                           47                             74
  CLUS_3                           26                             72
  CLUS_4                           15                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(11Q13.3) MUTATED       15     53     11     39     16
  AMP PEAK 22(11Q13.3) WILD-TYPE     57     82     27     64     40
D22V5, multiclass
        clus
vv       AMP PEAK 22(11Q13.3) MUTATED AMP PEAK 22(11Q13.3) WILD-TYPE
  CLUS_1                           15                             57
  CLUS_2                           53                             82
  CLUS_3                           11                             27
  CLUS_4                           39                             64
  CLUS_5                           16                             40
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(11Q13.3) MUTATED       44     39     51
  AMP PEAK 22(11Q13.3) WILD-TYPE     74     73    123
D22V6, multiclass
        clus
vv       AMP PEAK 22(11Q13.3) MUTATED AMP PEAK 22(11Q13.3) WILD-TYPE
  CLUS_1                           44                             74
  CLUS_2                           39                             73
  CLUS_3                           51                            123
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(11Q13.3) MUTATED       42     29     37      6     21
  AMP PEAK 22(11Q13.3) WILD-TYPE     63     45     77     19     66
D22V7, multiclass
        clus
vv       AMP PEAK 22(11Q13.3) MUTATED AMP PEAK 22(11Q13.3) WILD-TYPE
  CLUS_1                           42                             63
  CLUS_2                           29                             45
  CLUS_3                           37                             77
  CLUS_4                            6                             19
  CLUS_5                           21                             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(11Q13.3) MUTATED       89     31     15
  AMP PEAK 22(11Q13.3) WILD-TYPE    177     52     41
D22V8, multiclass
        clus
vv       AMP PEAK 22(11Q13.3) MUTATED AMP PEAK 22(11Q13.3) WILD-TYPE
  CLUS_1                           89                            177
  CLUS_2                           31                             52
  CLUS_3                           15                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(11Q13.3) MUTATED       35     23     42     32
  AMP PEAK 22(11Q13.3) WILD-TYPE     89     28     85     60
D22V9, multiclass
        clus
vv       AMP PEAK 22(11Q13.3) MUTATED AMP PEAK 22(11Q13.3) WILD-TYPE
  CLUS_1                           35                             89
  CLUS_2                           23                             28
  CLUS_3                           42                             85
  CLUS_4                           32                             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(11Q13.3) MUTATED       24     24      8     48     28
  AMP PEAK 22(11Q13.3) WILD-TYPE     63     36     33     84     46
D22V10, multiclass
        clus
vv       AMP PEAK 22(11Q13.3) MUTATED AMP PEAK 22(11Q13.3) WILD-TYPE
  CLUS_1                           24                             63
  CLUS_2                           24                             36
  CLUS_3                            8                             33
  CLUS_4                           48                             84
  CLUS_5                           28                             46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = AMP PEAK 23(11Q22.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(11Q22.2) MUTATED       20     33      4     14      0
  AMP PEAK 23(11Q22.2) WILD-TYPE     58    113    117     47      2
D23V1, multiclass
        clus
vv       AMP PEAK 23(11Q22.2) MUTATED AMP PEAK 23(11Q22.2) WILD-TYPE
  CLUS_1                           20                             58
  CLUS_2                           33                            113
  CLUS_3                            4                            117
  CLUS_4                           14                             47
  CLUS_5                            0                              2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(11Q22.2) MUTATED       25     27      9     10
  AMP PEAK 23(11Q22.2) WILD-TYPE    113    100     54     70
D23V2, multiclass
        clus
vv       AMP PEAK 23(11Q22.2) MUTATED AMP PEAK 23(11Q22.2) WILD-TYPE
  CLUS_1                           25                            113
  CLUS_2                           27                            100
  CLUS_3                            9                             54
  CLUS_4                           10                             70
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(11Q22.2) MUTATED       21     18     19
  AMP PEAK 23(11Q22.2) WILD-TYPE    101     96     85
D23V3, multiclass
        clus
vv       AMP PEAK 23(11Q22.2) MUTATED AMP PEAK 23(11Q22.2) WILD-TYPE
  CLUS_1                           21                            101
  CLUS_2                           18                             96
  CLUS_3                           19                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(11Q22.2) MUTATED       15     22     13      8
  AMP PEAK 23(11Q22.2) WILD-TYPE     75     99     85     23
D23V4, multiclass
        clus
vv       AMP PEAK 23(11Q22.2) MUTATED AMP PEAK 23(11Q22.2) WILD-TYPE
  CLUS_1                           15                             75
  CLUS_2                           22                             99
  CLUS_3                           13                             85
  CLUS_4                            8                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(11Q22.2) MUTATED        8     26      4     24      9
  AMP PEAK 23(11Q22.2) WILD-TYPE     64    109     34     79     47
D23V5, multiclass
        clus
vv       AMP PEAK 23(11Q22.2) MUTATED AMP PEAK 23(11Q22.2) WILD-TYPE
  CLUS_1                            8                             64
  CLUS_2                           26                            109
  CLUS_3                            4                             34
  CLUS_4                           24                             79
  CLUS_5                            9                             47
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(11Q22.2) MUTATED       26     14     31
  AMP PEAK 23(11Q22.2) WILD-TYPE     92     98    143
D23V6, multiclass
        clus
vv       AMP PEAK 23(11Q22.2) MUTATED AMP PEAK 23(11Q22.2) WILD-TYPE
  CLUS_1                           26                             92
  CLUS_2                           14                             98
  CLUS_3                           31                            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(11Q22.2) MUTATED       25     22     11      4      9
  AMP PEAK 23(11Q22.2) WILD-TYPE     80     52    103     21     78
D23V7, multiclass
        clus
vv       AMP PEAK 23(11Q22.2) MUTATED AMP PEAK 23(11Q22.2) WILD-TYPE
  CLUS_1                           25                             80
  CLUS_2                           22                             52
  CLUS_3                           11                            103
  CLUS_4                            4                             21
  CLUS_5                            9                             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(11Q22.2) MUTATED       42     23      6
  AMP PEAK 23(11Q22.2) WILD-TYPE    224     60     50
D23V8, multiclass
        clus
vv       AMP PEAK 23(11Q22.2) MUTATED AMP PEAK 23(11Q22.2) WILD-TYPE
  CLUS_1                           42                            224
  CLUS_2                           23                             60
  CLUS_3                            6                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(11Q22.2) MUTATED       18     17     12     24
  AMP PEAK 23(11Q22.2) WILD-TYPE    106     34    115     68
D23V9, multiclass
        clus
vv       AMP PEAK 23(11Q22.2) MUTATED AMP PEAK 23(11Q22.2) WILD-TYPE
  CLUS_1                           18                            106
  CLUS_2                           17                             34
  CLUS_3                           12                            115
  CLUS_4                           24                             68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(11Q22.2) MUTATED       10     17      5     19     20
  AMP PEAK 23(11Q22.2) WILD-TYPE     77     43     36    113     54
D23V10, multiclass
        clus
vv       AMP PEAK 23(11Q22.2) MUTATED AMP PEAK 23(11Q22.2) WILD-TYPE
  CLUS_1                           10                             77
  CLUS_2                           17                             43
  CLUS_3                            5                             36
  CLUS_4                           19                            113
  CLUS_5                           20                             54
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = AMP PEAK 24(12P12.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(12P12.1) MUTATED       38     52     21     21      0
  AMP PEAK 24(12P12.1) WILD-TYPE     40     94    100     40      2
D24V1, multiclass
        clus
vv       AMP PEAK 24(12P12.1) MUTATED AMP PEAK 24(12P12.1) WILD-TYPE
  CLUS_1                           38                             40
  CLUS_2                           52                             94
  CLUS_3                           21                            100
  CLUS_4                           21                             40
  CLUS_5                            0                              2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(12P12.1) MUTATED       52     45     13     22
  AMP PEAK 24(12P12.1) WILD-TYPE     86     82     50     58
D24V2, multiclass
        clus
vv       AMP PEAK 24(12P12.1) MUTATED AMP PEAK 24(12P12.1) WILD-TYPE
  CLUS_1                           52                             86
  CLUS_2                           45                             82
  CLUS_3                           13                             50
  CLUS_4                           22                             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(12P12.1) MUTATED       38     29     41
  AMP PEAK 24(12P12.1) WILD-TYPE     84     85     63
D24V3, multiclass
        clus
vv       AMP PEAK 24(12P12.1) MUTATED AMP PEAK 24(12P12.1) WILD-TYPE
  CLUS_1                           38                             84
  CLUS_2                           29                             85
  CLUS_3                           41                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(12P12.1) MUTATED       26     38     34     10
  AMP PEAK 24(12P12.1) WILD-TYPE     64     83     64     21
D24V4, multiclass
        clus
vv       AMP PEAK 24(12P12.1) MUTATED AMP PEAK 24(12P12.1) WILD-TYPE
  CLUS_1                           26                             64
  CLUS_2                           38                             83
  CLUS_3                           34                             64
  CLUS_4                           10                             21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(12P12.1) MUTATED       19     38     15     41     19
  AMP PEAK 24(12P12.1) WILD-TYPE     53     97     23     62     37
D24V5, multiclass
        clus
vv       AMP PEAK 24(12P12.1) MUTATED AMP PEAK 24(12P12.1) WILD-TYPE
  CLUS_1                           19                             53
  CLUS_2                           38                             97
  CLUS_3                           15                             23
  CLUS_4                           41                             62
  CLUS_5                           19                             37
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(12P12.1) MUTATED       35     36     61
  AMP PEAK 24(12P12.1) WILD-TYPE     83     76    113
D24V6, multiclass
        clus
vv       AMP PEAK 24(12P12.1) MUTATED AMP PEAK 24(12P12.1) WILD-TYPE
  CLUS_1                           35                             83
  CLUS_2                           36                             76
  CLUS_3                           61                            113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(12P12.1) MUTATED       42     22     32     10     26
  AMP PEAK 24(12P12.1) WILD-TYPE     63     52     82     15     61
D24V7, multiclass
        clus
vv       AMP PEAK 24(12P12.1) MUTATED AMP PEAK 24(12P12.1) WILD-TYPE
  CLUS_1                           42                             63
  CLUS_2                           22                             52
  CLUS_3                           32                             82
  CLUS_4                           10                             15
  CLUS_5                           26                             61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(12P12.1) MUTATED       91     27     14
  AMP PEAK 24(12P12.1) WILD-TYPE    175     56     42
D24V8, multiclass
        clus
vv       AMP PEAK 24(12P12.1) MUTATED AMP PEAK 24(12P12.1) WILD-TYPE
  CLUS_1                           91                            175
  CLUS_2                           27                             56
  CLUS_3                           14                             42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(12P12.1) MUTATED       35     16     40     38
  AMP PEAK 24(12P12.1) WILD-TYPE     89     35     87     54
D24V9, multiclass
        clus
vv       AMP PEAK 24(12P12.1) MUTATED AMP PEAK 24(12P12.1) WILD-TYPE
  CLUS_1                           35                             89
  CLUS_2                           16                             35
  CLUS_3                           40                             87
  CLUS_4                           38                             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(12P12.1) MUTATED       17     22     17     43     30
  AMP PEAK 24(12P12.1) WILD-TYPE     70     38     24     89     44
D24V10, multiclass
        clus
vv       AMP PEAK 24(12P12.1) MUTATED AMP PEAK 24(12P12.1) WILD-TYPE
  CLUS_1                           17                             70
  CLUS_2                           22                             38
  CLUS_3                           17                             24
  CLUS_4                           43                             89
  CLUS_5                           30                             44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = AMP PEAK 25(12Q15) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(12Q15) MUTATED       27     58     25      8      0
  AMP PEAK 25(12Q15) WILD-TYPE     51     88     96     53      2
D25V1, multiclass
        clus
vv       AMP PEAK 25(12Q15) MUTATED AMP PEAK 25(12Q15) WILD-TYPE
  CLUS_1                         27                           51
  CLUS_2                         58                           88
  CLUS_3                         25                           96
  CLUS_4                          8                           53
  CLUS_5                          0                            2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(12Q15) MUTATED       35     44     18     21
  AMP PEAK 25(12Q15) WILD-TYPE    103     83     45     59
D25V2, multiclass
        clus
vv       AMP PEAK 25(12Q15) MUTATED AMP PEAK 25(12Q15) WILD-TYPE
  CLUS_1                         35                          103
  CLUS_2                         44                           83
  CLUS_3                         18                           45
  CLUS_4                         21                           59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(12Q15) MUTATED       32     33     29
  AMP PEAK 25(12Q15) WILD-TYPE     90     81     75
D25V3, multiclass
        clus
vv       AMP PEAK 25(12Q15) MUTATED AMP PEAK 25(12Q15) WILD-TYPE
  CLUS_1                         32                           90
  CLUS_2                         33                           81
  CLUS_3                         29                           75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(12Q15) MUTATED       26     37     22      9
  AMP PEAK 25(12Q15) WILD-TYPE     64     84     76     22
D25V4, multiclass
        clus
vv       AMP PEAK 25(12Q15) MUTATED AMP PEAK 25(12Q15) WILD-TYPE
  CLUS_1                         26                           64
  CLUS_2                         37                           84
  CLUS_3                         22                           76
  CLUS_4                          9                           22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(12Q15) MUTATED       22     44     12     18     22
  AMP PEAK 25(12Q15) WILD-TYPE     50     91     26     85     34
D25V5, multiclass
        clus
vv       AMP PEAK 25(12Q15) MUTATED AMP PEAK 25(12Q15) WILD-TYPE
  CLUS_1                         22                           50
  CLUS_2                         44                           91
  CLUS_3                         12                           26
  CLUS_4                         18                           85
  CLUS_5                         22                           34
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(12Q15) MUTATED       41     40     37
  AMP PEAK 25(12Q15) WILD-TYPE     77     72    137
D25V6, multiclass
        clus
vv       AMP PEAK 25(12Q15) MUTATED AMP PEAK 25(12Q15) WILD-TYPE
  CLUS_1                         41                           77
  CLUS_2                         40                           72
  CLUS_3                         37                          137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(12Q15) MUTATED       16     28     36      9     29
  AMP PEAK 25(12Q15) WILD-TYPE     89     46     78     16     58
D25V7, multiclass
        clus
vv       AMP PEAK 25(12Q15) MUTATED AMP PEAK 25(12Q15) WILD-TYPE
  CLUS_1                         16                           89
  CLUS_2                         28                           46
  CLUS_3                         36                           78
  CLUS_4                          9                           16
  CLUS_5                         29                           58
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(12Q15) MUTATED       67     33     18
  AMP PEAK 25(12Q15) WILD-TYPE    199     50     38
D25V8, multiclass
        clus
vv       AMP PEAK 25(12Q15) MUTATED AMP PEAK 25(12Q15) WILD-TYPE
  CLUS_1                         67                          199
  CLUS_2                         33                           50
  CLUS_3                         18                           38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(12Q15) MUTATED       43     20     40     14
  AMP PEAK 25(12Q15) WILD-TYPE     81     31     87     78
D25V9, multiclass
        clus
vv       AMP PEAK 25(12Q15) MUTATED AMP PEAK 25(12Q15) WILD-TYPE
  CLUS_1                         43                           81
  CLUS_2                         20                           31
  CLUS_3                         40                           87
  CLUS_4                         14                           78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(12Q15) MUTATED       23     28     19     37     10
  AMP PEAK 25(12Q15) WILD-TYPE     64     32     22     95     64
D25V10, multiclass
        clus
vv       AMP PEAK 25(12Q15) MUTATED AMP PEAK 25(12Q15) WILD-TYPE
  CLUS_1                         23                           64
  CLUS_2                         28                           32
  CLUS_3                         19                           22
  CLUS_4                         37                           95
  CLUS_5                         10                           64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = AMP PEAK 26(13Q22.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(13Q22.1) MUTATED       32     56     16     24      0
  AMP PEAK 26(13Q22.1) WILD-TYPE     46     90    105     37      2
D26V1, multiclass
        clus
vv       AMP PEAK 26(13Q22.1) MUTATED AMP PEAK 26(13Q22.1) WILD-TYPE
  CLUS_1                           32                             46
  CLUS_2                           56                             90
  CLUS_3                           16                            105
  CLUS_4                           24                             37
  CLUS_5                            0                              2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(13Q22.1) MUTATED       43     40     18     27
  AMP PEAK 26(13Q22.1) WILD-TYPE     95     87     45     53
D26V2, multiclass
        clus
vv       AMP PEAK 26(13Q22.1) MUTATED AMP PEAK 26(13Q22.1) WILD-TYPE
  CLUS_1                           43                             95
  CLUS_2                           40                             87
  CLUS_3                           18                             45
  CLUS_4                           27                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(13Q22.1) MUTATED       37     31     38
  AMP PEAK 26(13Q22.1) WILD-TYPE     85     83     66
D26V3, multiclass
        clus
vv       AMP PEAK 26(13Q22.1) MUTATED AMP PEAK 26(13Q22.1) WILD-TYPE
  CLUS_1                           37                             85
  CLUS_2                           31                             83
  CLUS_3                           38                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(13Q22.1) MUTATED       26     36     34     10
  AMP PEAK 26(13Q22.1) WILD-TYPE     64     85     64     21
D26V4, multiclass
        clus
vv       AMP PEAK 26(13Q22.1) MUTATED AMP PEAK 26(13Q22.1) WILD-TYPE
  CLUS_1                           26                             64
  CLUS_2                           36                             85
  CLUS_3                           34                             64
  CLUS_4                           10                             21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(13Q22.1) MUTATED       25     41     12     31     17
  AMP PEAK 26(13Q22.1) WILD-TYPE     47     94     26     72     39
D26V5, multiclass
        clus
vv       AMP PEAK 26(13Q22.1) MUTATED AMP PEAK 26(13Q22.1) WILD-TYPE
  CLUS_1                           25                             47
  CLUS_2                           41                             94
  CLUS_3                           12                             26
  CLUS_4                           31                             72
  CLUS_5                           17                             39
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(13Q22.1) MUTATED       42     30     54
  AMP PEAK 26(13Q22.1) WILD-TYPE     76     82    120
D26V6, multiclass
        clus
vv       AMP PEAK 26(13Q22.1) MUTATED AMP PEAK 26(13Q22.1) WILD-TYPE
  CLUS_1                           42                             76
  CLUS_2                           30                             82
  CLUS_3                           54                            120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(13Q22.1) MUTATED       39     27     30      7     25
  AMP PEAK 26(13Q22.1) WILD-TYPE     66     47     84     18     62
D26V7, multiclass
        clus
vv       AMP PEAK 26(13Q22.1) MUTATED AMP PEAK 26(13Q22.1) WILD-TYPE
  CLUS_1                           39                             66
  CLUS_2                           27                             47
  CLUS_3                           30                             84
  CLUS_4                            7                             18
  CLUS_5                           25                             62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(13Q22.1) MUTATED       83     29     16
  AMP PEAK 26(13Q22.1) WILD-TYPE    183     54     40
D26V8, multiclass
        clus
vv       AMP PEAK 26(13Q22.1) MUTATED AMP PEAK 26(13Q22.1) WILD-TYPE
  CLUS_1                           83                            183
  CLUS_2                           29                             54
  CLUS_3                           16                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(13Q22.1) MUTATED       42     17     37     30
  AMP PEAK 26(13Q22.1) WILD-TYPE     82     34     90     62
D26V9, multiclass
        clus
vv       AMP PEAK 26(13Q22.1) MUTATED AMP PEAK 26(13Q22.1) WILD-TYPE
  CLUS_1                           42                             82
  CLUS_2                           17                             34
  CLUS_3                           37                             90
  CLUS_4                           30                             62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(13Q22.1) MUTATED       28     19     12     42     25
  AMP PEAK 26(13Q22.1) WILD-TYPE     59     41     29     90     49
D26V10, multiclass
        clus
vv       AMP PEAK 26(13Q22.1) MUTATED AMP PEAK 26(13Q22.1) WILD-TYPE
  CLUS_1                           28                             59
  CLUS_2                           19                             41
  CLUS_3                           12                             29
  CLUS_4                           42                             90
  CLUS_5                           25                             49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = AMP PEAK 27(16P13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(16P13.2) MUTATED       17     49     10      9      2
  AMP PEAK 27(16P13.2) WILD-TYPE     61     97    111     52      0
D27V1, multiclass
        clus
vv       AMP PEAK 27(16P13.2) MUTATED AMP PEAK 27(16P13.2) WILD-TYPE
  CLUS_1                           17                             61
  CLUS_2                           49                             97
  CLUS_3                           10                            111
  CLUS_4                            9                             52
  CLUS_5                            2                              0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(16P13.2) MUTATED       26     43      9      9
  AMP PEAK 27(16P13.2) WILD-TYPE    112     84     54     71
D27V2, multiclass
        clus
vv       AMP PEAK 27(16P13.2) MUTATED AMP PEAK 27(16P13.2) WILD-TYPE
  CLUS_1                           26                            112
  CLUS_2                           43                             84
  CLUS_3                            9                             54
  CLUS_4                            9                             71
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(16P13.2) MUTATED       25     23     22
  AMP PEAK 27(16P13.2) WILD-TYPE     97     91     82
D27V3, multiclass
        clus
vv       AMP PEAK 27(16P13.2) MUTATED AMP PEAK 27(16P13.2) WILD-TYPE
  CLUS_1                           25                             97
  CLUS_2                           23                             91
  CLUS_3                           22                             82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(16P13.2) MUTATED       20     24     18      8
  AMP PEAK 27(16P13.2) WILD-TYPE     70     97     80     23
D27V4, multiclass
        clus
vv       AMP PEAK 27(16P13.2) MUTATED AMP PEAK 27(16P13.2) WILD-TYPE
  CLUS_1                           20                             70
  CLUS_2                           24                             97
  CLUS_3                           18                             80
  CLUS_4                            8                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(16P13.2) MUTATED       12     28      6     18     23
  AMP PEAK 27(16P13.2) WILD-TYPE     60    107     32     85     33
D27V5, multiclass
        clus
vv       AMP PEAK 27(16P13.2) MUTATED AMP PEAK 27(16P13.2) WILD-TYPE
  CLUS_1                           12                             60
  CLUS_2                           28                            107
  CLUS_3                            6                             32
  CLUS_4                           18                             85
  CLUS_5                           23                             33
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(16P13.2) MUTATED       34     21     32
  AMP PEAK 27(16P13.2) WILD-TYPE     84     91    142
D27V6, multiclass
        clus
vv       AMP PEAK 27(16P13.2) MUTATED AMP PEAK 27(16P13.2) WILD-TYPE
  CLUS_1                           34                             84
  CLUS_2                           21                             91
  CLUS_3                           32                            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(16P13.2) MUTATED       20     18     22     10     17
  AMP PEAK 27(16P13.2) WILD-TYPE     85     56     92     15     70
D27V7, multiclass
        clus
vv       AMP PEAK 27(16P13.2) MUTATED AMP PEAK 27(16P13.2) WILD-TYPE
  CLUS_1                           20                             85
  CLUS_2                           18                             56
  CLUS_3                           22                             92
  CLUS_4                           10                             15
  CLUS_5                           17                             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(16P13.2) MUTATED       54     23     10
  AMP PEAK 27(16P13.2) WILD-TYPE    212     60     46
D27V8, multiclass
        clus
vv       AMP PEAK 27(16P13.2) MUTATED AMP PEAK 27(16P13.2) WILD-TYPE
  CLUS_1                           54                            212
  CLUS_2                           23                             60
  CLUS_3                           10                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(16P13.2) MUTATED       23     14     31     19
  AMP PEAK 27(16P13.2) WILD-TYPE    101     37     96     73
D27V9, multiclass
        clus
vv       AMP PEAK 27(16P13.2) MUTATED AMP PEAK 27(16P13.2) WILD-TYPE
  CLUS_1                           23                            101
  CLUS_2                           14                             37
  CLUS_3                           31                             96
  CLUS_4                           19                             73
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(16P13.2) MUTATED       14     16     11     32     14
  AMP PEAK 27(16P13.2) WILD-TYPE     73     44     30    100     60
D27V10, multiclass
        clus
vv       AMP PEAK 27(16P13.2) MUTATED AMP PEAK 27(16P13.2) WILD-TYPE
  CLUS_1                           14                             73
  CLUS_2                           16                             44
  CLUS_3                           11                             30
  CLUS_4                           32                            100
  CLUS_5                           14                             60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = AMP PEAK 28(16P11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(16P11.2) MUTATED       15     57     10     14      2
  AMP PEAK 28(16P11.2) WILD-TYPE     63     89    111     47      0
D28V1, multiclass
        clus
vv       AMP PEAK 28(16P11.2) MUTATED AMP PEAK 28(16P11.2) WILD-TYPE
  CLUS_1                           15                             63
  CLUS_2                           57                             89
  CLUS_3                           10                            111
  CLUS_4                           14                             47
  CLUS_5                            2                              0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(16P11.2) MUTATED       32     42     12     12
  AMP PEAK 28(16P11.2) WILD-TYPE    106     85     51     68
D28V2, multiclass
        clus
vv       AMP PEAK 28(16P11.2) MUTATED AMP PEAK 28(16P11.2) WILD-TYPE
  CLUS_1                           32                            106
  CLUS_2                           42                             85
  CLUS_3                           12                             51
  CLUS_4                           12                             68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(16P11.2) MUTATED       31     24     25
  AMP PEAK 28(16P11.2) WILD-TYPE     91     90     79
D28V3, multiclass
        clus
vv       AMP PEAK 28(16P11.2) MUTATED AMP PEAK 28(16P11.2) WILD-TYPE
  CLUS_1                           31                             91
  CLUS_2                           24                             90
  CLUS_3                           25                             79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(16P11.2) MUTATED       26     25     21      8
  AMP PEAK 28(16P11.2) WILD-TYPE     64     96     77     23
D28V4, multiclass
        clus
vv       AMP PEAK 28(16P11.2) MUTATED AMP PEAK 28(16P11.2) WILD-TYPE
  CLUS_1                           26                             64
  CLUS_2                           25                             96
  CLUS_3                           21                             77
  CLUS_4                            8                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(16P11.2) MUTATED       16     35      6     23     18
  AMP PEAK 28(16P11.2) WILD-TYPE     56    100     32     80     38
D28V5, multiclass
        clus
vv       AMP PEAK 28(16P11.2) MUTATED AMP PEAK 28(16P11.2) WILD-TYPE
  CLUS_1                           16                             56
  CLUS_2                           35                            100
  CLUS_3                            6                             32
  CLUS_4                           23                             80
  CLUS_5                           18                             38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(16P11.2) MUTATED       34     26     38
  AMP PEAK 28(16P11.2) WILD-TYPE     84     86    136
D28V6, multiclass
        clus
vv       AMP PEAK 28(16P11.2) MUTATED AMP PEAK 28(16P11.2) WILD-TYPE
  CLUS_1                           34                             84
  CLUS_2                           26                             86
  CLUS_3                           38                            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(16P11.2) MUTATED       23     22     24      8     21
  AMP PEAK 28(16P11.2) WILD-TYPE     82     52     90     17     66
D28V7, multiclass
        clus
vv       AMP PEAK 28(16P11.2) MUTATED AMP PEAK 28(16P11.2) WILD-TYPE
  CLUS_1                           23                             82
  CLUS_2                           22                             52
  CLUS_3                           24                             90
  CLUS_4                            8                             17
  CLUS_5                           21                             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(16P11.2) MUTATED       60     25     13
  AMP PEAK 28(16P11.2) WILD-TYPE    206     58     43
D28V8, multiclass
        clus
vv       AMP PEAK 28(16P11.2) MUTATED AMP PEAK 28(16P11.2) WILD-TYPE
  CLUS_1                           60                            206
  CLUS_2                           25                             58
  CLUS_3                           13                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(16P11.2) MUTATED       31     14     31     21
  AMP PEAK 28(16P11.2) WILD-TYPE     93     37     96     71
D28V9, multiclass
        clus
vv       AMP PEAK 28(16P11.2) MUTATED AMP PEAK 28(16P11.2) WILD-TYPE
  CLUS_1                           31                             93
  CLUS_2                           14                             37
  CLUS_3                           31                             96
  CLUS_4                           21                             71
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(16P11.2) MUTATED       20     16     10     36     15
  AMP PEAK 28(16P11.2) WILD-TYPE     67     44     31     96     59
D28V10, multiclass
        clus
vv       AMP PEAK 28(16P11.2) MUTATED AMP PEAK 28(16P11.2) WILD-TYPE
  CLUS_1                           20                             67
  CLUS_2                           16                             44
  CLUS_3                           10                             31
  CLUS_4                           36                             96
  CLUS_5                           15                             59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = AMP PEAK 29(16Q22.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(16Q22.1) MUTATED       13     72     11     11      1
  AMP PEAK 29(16Q22.1) WILD-TYPE     65     74    110     50      1
D29V1, multiclass
        clus
vv       AMP PEAK 29(16Q22.1) MUTATED AMP PEAK 29(16Q22.1) WILD-TYPE
  CLUS_1                           13                             65
  CLUS_2                           72                             74
  CLUS_3                           11                            110
  CLUS_4                           11                             50
  CLUS_5                            1                              1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(16Q22.1) MUTATED       40     36     13     19
  AMP PEAK 29(16Q22.1) WILD-TYPE     98     91     50     61
D29V2, multiclass
        clus
vv       AMP PEAK 29(16Q22.1) MUTATED AMP PEAK 29(16Q22.1) WILD-TYPE
  CLUS_1                           40                             98
  CLUS_2                           36                             91
  CLUS_3                           13                             50
  CLUS_4                           19                             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(16Q22.1) MUTATED       30     24     31
  AMP PEAK 29(16Q22.1) WILD-TYPE     92     90     73
D29V3, multiclass
        clus
vv       AMP PEAK 29(16Q22.1) MUTATED AMP PEAK 29(16Q22.1) WILD-TYPE
  CLUS_1                           30                             92
  CLUS_2                           24                             90
  CLUS_3                           31                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(16Q22.1) MUTATED       26     23     28      8
  AMP PEAK 29(16Q22.1) WILD-TYPE     64     98     70     23
D29V4, multiclass
        clus
vv       AMP PEAK 29(16Q22.1) MUTATED AMP PEAK 29(16Q22.1) WILD-TYPE
  CLUS_1                           26                             64
  CLUS_2                           23                             98
  CLUS_3                           28                             70
  CLUS_4                            8                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(16Q22.1) MUTATED       21     31      7     31     17
  AMP PEAK 29(16Q22.1) WILD-TYPE     51    104     31     72     39
D29V5, multiclass
        clus
vv       AMP PEAK 29(16Q22.1) MUTATED AMP PEAK 29(16Q22.1) WILD-TYPE
  CLUS_1                           21                             51
  CLUS_2                           31                            104
  CLUS_3                            7                             31
  CLUS_4                           31                             72
  CLUS_5                           17                             39
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(16Q22.1) MUTATED       41     18     48
  AMP PEAK 29(16Q22.1) WILD-TYPE     77     94    126
D29V6, multiclass
        clus
vv       AMP PEAK 29(16Q22.1) MUTATED AMP PEAK 29(16Q22.1) WILD-TYPE
  CLUS_1                           41                             77
  CLUS_2                           18                             94
  CLUS_3                           48                            126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(16Q22.1) MUTATED       30     26     20      5     27
  AMP PEAK 29(16Q22.1) WILD-TYPE     75     48     94     20     60
D29V7, multiclass
        clus
vv       AMP PEAK 29(16Q22.1) MUTATED AMP PEAK 29(16Q22.1) WILD-TYPE
  CLUS_1                           30                             75
  CLUS_2                           26                             48
  CLUS_3                           20                             94
  CLUS_4                            5                             20
  CLUS_5                           27                             60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(16Q22.1) MUTATED       59     31     18
  AMP PEAK 29(16Q22.1) WILD-TYPE    207     52     38
D29V8, multiclass
        clus
vv       AMP PEAK 29(16Q22.1) MUTATED AMP PEAK 29(16Q22.1) WILD-TYPE
  CLUS_1                           59                            207
  CLUS_2                           31                             52
  CLUS_3                           18                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(16Q22.1) MUTATED       40     18     23     26
  AMP PEAK 29(16Q22.1) WILD-TYPE     84     33    104     66
D29V9, multiclass
        clus
vv       AMP PEAK 29(16Q22.1) MUTATED AMP PEAK 29(16Q22.1) WILD-TYPE
  CLUS_1                           40                             84
  CLUS_2                           18                             33
  CLUS_3                           23                            104
  CLUS_4                           26                             66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(16Q22.1) MUTATED       24     22     13     27     21
  AMP PEAK 29(16Q22.1) WILD-TYPE     63     38     28    105     53
D29V10, multiclass
        clus
vv       AMP PEAK 29(16Q22.1) MUTATED AMP PEAK 29(16Q22.1) WILD-TYPE
  CLUS_1                           24                             63
  CLUS_2                           22                             38
  CLUS_3                           13                             28
  CLUS_4                           27                            105
  CLUS_5                           21                             53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = AMP PEAK 30(17P11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 30(17P11.2) MUTATED       19     39     13     16      1
  AMP PEAK 30(17P11.2) WILD-TYPE     59    107    108     45      1
D30V1, multiclass
        clus
vv       AMP PEAK 30(17P11.2) MUTATED AMP PEAK 30(17P11.2) WILD-TYPE
  CLUS_1                           19                             59
  CLUS_2                           39                            107
  CLUS_3                           13                            108
  CLUS_4                           16                             45
  CLUS_5                            1                              1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(17P11.2) MUTATED       23     27     14     24
  AMP PEAK 30(17P11.2) WILD-TYPE    115    100     49     56
D30V2, multiclass
        clus
vv       AMP PEAK 30(17P11.2) MUTATED AMP PEAK 30(17P11.2) WILD-TYPE
  CLUS_1                           23                            115
  CLUS_2                           27                            100
  CLUS_3                           14                             49
  CLUS_4                           24                             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(17P11.2) MUTATED       28     22     25
  AMP PEAK 30(17P11.2) WILD-TYPE     94     92     79
D30V3, multiclass
        clus
vv       AMP PEAK 30(17P11.2) MUTATED AMP PEAK 30(17P11.2) WILD-TYPE
  CLUS_1                           28                             94
  CLUS_2                           22                             92
  CLUS_3                           25                             79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(17P11.2) MUTATED       21     25     23      6
  AMP PEAK 30(17P11.2) WILD-TYPE     69     96     75     25
D30V4, multiclass
        clus
vv       AMP PEAK 30(17P11.2) MUTATED AMP PEAK 30(17P11.2) WILD-TYPE
  CLUS_1                           21                             69
  CLUS_2                           25                             96
  CLUS_3                           23                             75
  CLUS_4                            6                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 30(17P11.2) MUTATED       17     33      4     18     15
  AMP PEAK 30(17P11.2) WILD-TYPE     55    102     34     85     41
D30V5, multiclass
        clus
vv       AMP PEAK 30(17P11.2) MUTATED AMP PEAK 30(17P11.2) WILD-TYPE
  CLUS_1                           17                             55
  CLUS_2                           33                            102
  CLUS_3                            4                             34
  CLUS_4                           18                             85
  CLUS_5                           15                             41
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(17P11.2) MUTATED       29     23     35
  AMP PEAK 30(17P11.2) WILD-TYPE     89     89    139
D30V6, multiclass
        clus
vv       AMP PEAK 30(17P11.2) MUTATED AMP PEAK 30(17P11.2) WILD-TYPE
  CLUS_1                           29                             89
  CLUS_2                           23                             89
  CLUS_3                           35                            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 30(17P11.2) MUTATED       17     21     26      6     18
  AMP PEAK 30(17P11.2) WILD-TYPE     88     53     88     19     69
D30V7, multiclass
        clus
vv       AMP PEAK 30(17P11.2) MUTATED AMP PEAK 30(17P11.2) WILD-TYPE
  CLUS_1                           17                             88
  CLUS_2                           21                             53
  CLUS_3                           26                             88
  CLUS_4                            6                             19
  CLUS_5                           18                             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(17P11.2) MUTATED       53     24     11
  AMP PEAK 30(17P11.2) WILD-TYPE    213     59     45
D30V8, multiclass
        clus
vv       AMP PEAK 30(17P11.2) MUTATED AMP PEAK 30(17P11.2) WILD-TYPE
  CLUS_1                           53                            213
  CLUS_2                           24                             59
  CLUS_3                           11                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(17P11.2) MUTATED       29     15     27     15
  AMP PEAK 30(17P11.2) WILD-TYPE     95     36    100     77
D30V9, multiclass
        clus
vv       AMP PEAK 30(17P11.2) MUTATED AMP PEAK 30(17P11.2) WILD-TYPE
  CLUS_1                           29                             95
  CLUS_2                           15                             36
  CLUS_3                           27                            100
  CLUS_4                           15                             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 30(17P11.2) MUTATED       20     18      9     26     13
  AMP PEAK 30(17P11.2) WILD-TYPE     67     42     32    106     61
D30V10, multiclass
        clus
vv       AMP PEAK 30(17P11.2) MUTATED AMP PEAK 30(17P11.2) WILD-TYPE
  CLUS_1                           20                             67
  CLUS_2                           18                             42
  CLUS_3                            9                             32
  CLUS_4                           26                            106
  CLUS_5                           13                             61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = AMP PEAK 31(17Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 31(17Q11.2) MUTATED       54     79     22     19      0
  AMP PEAK 31(17Q11.2) WILD-TYPE     24     67     99     42      2
D31V1, multiclass
        clus
vv       AMP PEAK 31(17Q11.2) MUTATED AMP PEAK 31(17Q11.2) WILD-TYPE
  CLUS_1                           54                             24
  CLUS_2                           79                             67
  CLUS_3                           22                             99
  CLUS_4                           19                             42
  CLUS_5                            0                              2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(17Q11.2) MUTATED       37     74     26     37
  AMP PEAK 31(17Q11.2) WILD-TYPE    101     53     37     43
D31V2, multiclass
        clus
vv       AMP PEAK 31(17Q11.2) MUTATED AMP PEAK 31(17Q11.2) WILD-TYPE
  CLUS_1                           37                            101
  CLUS_2                           74                             53
  CLUS_3                           26                             37
  CLUS_4                           37                             43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(17Q11.2) MUTATED       43     50     51
  AMP PEAK 31(17Q11.2) WILD-TYPE     79     64     53
D31V3, multiclass
        clus
vv       AMP PEAK 31(17Q11.2) MUTATED AMP PEAK 31(17Q11.2) WILD-TYPE
  CLUS_1                           43                             79
  CLUS_2                           50                             64
  CLUS_3                           51                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(17Q11.2) MUTATED       39     59     37      9
  AMP PEAK 31(17Q11.2) WILD-TYPE     51     62     61     22
D31V4, multiclass
        clus
vv       AMP PEAK 31(17Q11.2) MUTATED AMP PEAK 31(17Q11.2) WILD-TYPE
  CLUS_1                           39                             51
  CLUS_2                           59                             62
  CLUS_3                           37                             61
  CLUS_4                            9                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 31(17Q11.2) MUTATED       27     69     15     29     33
  AMP PEAK 31(17Q11.2) WILD-TYPE     45     66     23     74     23
D31V5, multiclass
        clus
vv       AMP PEAK 31(17Q11.2) MUTATED AMP PEAK 31(17Q11.2) WILD-TYPE
  CLUS_1                           27                             45
  CLUS_2                           69                             66
  CLUS_3                           15                             23
  CLUS_4                           29                             74
  CLUS_5                           33                             23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(17Q11.2) MUTATED       62     56     55
  AMP PEAK 31(17Q11.2) WILD-TYPE     56     56    119
D31V6, multiclass
        clus
vv       AMP PEAK 31(17Q11.2) MUTATED AMP PEAK 31(17Q11.2) WILD-TYPE
  CLUS_1                           62                             56
  CLUS_2                           56                             56
  CLUS_3                           55                            119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 31(17Q11.2) MUTATED       34     37     56     12     34
  AMP PEAK 31(17Q11.2) WILD-TYPE     71     37     58     13     53
D31V7, multiclass
        clus
vv       AMP PEAK 31(17Q11.2) MUTATED AMP PEAK 31(17Q11.2) WILD-TYPE
  CLUS_1                           34                             71
  CLUS_2                           37                             37
  CLUS_3                           56                             58
  CLUS_4                           12                             13
  CLUS_5                           34                             53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(17Q11.2) MUTATED      110     40     23
  AMP PEAK 31(17Q11.2) WILD-TYPE    156     43     33
D31V8, multiclass
        clus
vv       AMP PEAK 31(17Q11.2) MUTATED AMP PEAK 31(17Q11.2) WILD-TYPE
  CLUS_1                          110                            156
  CLUS_2                           40                             43
  CLUS_3                           23                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(17Q11.2) MUTATED       53     29     62     26
  AMP PEAK 31(17Q11.2) WILD-TYPE     71     22     65     66
D31V9, multiclass
        clus
vv       AMP PEAK 31(17Q11.2) MUTATED AMP PEAK 31(17Q11.2) WILD-TYPE
  CLUS_1                           53                             71
  CLUS_2                           29                             22
  CLUS_3                           62                             65
  CLUS_4                           26                             66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 31(17Q11.2) MUTATED       35     30     17     68     20
  AMP PEAK 31(17Q11.2) WILD-TYPE     52     30     24     64     54
D31V10, multiclass
        clus
vv       AMP PEAK 31(17Q11.2) MUTATED AMP PEAK 31(17Q11.2) WILD-TYPE
  CLUS_1                           35                             52
  CLUS_2                           30                             30
  CLUS_3                           17                             24
  CLUS_4                           68                             64
  CLUS_5                           20                             54
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = AMP PEAK 32(17Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 32(17Q12) MUTATED       53     67     25     20      0
  AMP PEAK 32(17Q12) WILD-TYPE     25     79     96     41      2
D32V1, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         53                           25
  CLUS_2                         67                           79
  CLUS_3                         25                           96
  CLUS_4                         20                           41
  CLUS_5                          0                            2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(17Q12) MUTATED       43     61     25     36
  AMP PEAK 32(17Q12) WILD-TYPE     95     66     38     44
D32V2, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         43                           95
  CLUS_2                         61                           66
  CLUS_3                         25                           38
  CLUS_4                         36                           44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(17Q12) MUTATED       42     46     48
  AMP PEAK 32(17Q12) WILD-TYPE     80     68     56
D32V3, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         42                           80
  CLUS_2                         46                           68
  CLUS_3                         48                           56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(17Q12) MUTATED       37     56     35      8
  AMP PEAK 32(17Q12) WILD-TYPE     53     65     63     23
D32V4, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         37                           53
  CLUS_2                         56                           65
  CLUS_3                         35                           63
  CLUS_4                          8                           23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 32(17Q12) MUTATED       26     64     14     33     27
  AMP PEAK 32(17Q12) WILD-TYPE     46     71     24     70     29
D32V5, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         26                           46
  CLUS_2                         64                           71
  CLUS_3                         14                           24
  CLUS_4                         33                           70
  CLUS_5                         27                           29
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(17Q12) MUTATED       50     55     59
  AMP PEAK 32(17Q12) WILD-TYPE     68     57    115
D32V6, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         50                           68
  CLUS_2                         55                           57
  CLUS_3                         59                          115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 32(17Q12) MUTATED       33     38     53     10     30
  AMP PEAK 32(17Q12) WILD-TYPE     72     36     61     15     57
D32V7, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         33                           72
  CLUS_2                         38                           36
  CLUS_3                         53                           61
  CLUS_4                         10                           15
  CLUS_5                         30                           57
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(17Q12) MUTATED      102     42     20
  AMP PEAK 32(17Q12) WILD-TYPE    164     41     36
D32V8, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                        102                          164
  CLUS_2                         42                           41
  CLUS_3                         20                           36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(17Q12) MUTATED       45     28     60     28
  AMP PEAK 32(17Q12) WILD-TYPE     79     23     67     64
D32V9, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         45                           79
  CLUS_2                         28                           23
  CLUS_3                         60                           67
  CLUS_4                         28                           64
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 32(17Q12) MUTATED       31     33     14     62     21
  AMP PEAK 32(17Q12) WILD-TYPE     56     27     27     70     53
D32V10, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         31                           56
  CLUS_2                         33                           27
  CLUS_3                         14                           27
  CLUS_4                         62                           70
  CLUS_5                         21                           53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = AMP PEAK 33(17Q23.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 33(17Q23.3) MUTATED       59     80     31     23      1
  AMP PEAK 33(17Q23.3) WILD-TYPE     19     66     90     38      1
D33V1, multiclass
        clus
vv       AMP PEAK 33(17Q23.3) MUTATED AMP PEAK 33(17Q23.3) WILD-TYPE
  CLUS_1                           59                             19
  CLUS_2                           80                             66
  CLUS_3                           31                             90
  CLUS_4                           23                             38
  CLUS_5                            1                              1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 33(17Q23.3) MUTATED       57     73     25     39
  AMP PEAK 33(17Q23.3) WILD-TYPE     81     54     38     41
D33V2, multiclass
        clus
vv       AMP PEAK 33(17Q23.3) MUTATED AMP PEAK 33(17Q23.3) WILD-TYPE
  CLUS_1                           57                             81
  CLUS_2                           73                             54
  CLUS_3                           25                             38
  CLUS_4                           39                             41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 33(17Q23.3) MUTATED       53     53     59
  AMP PEAK 33(17Q23.3) WILD-TYPE     69     61     45
D33V3, multiclass
        clus
vv       AMP PEAK 33(17Q23.3) MUTATED AMP PEAK 33(17Q23.3) WILD-TYPE
  CLUS_1                           53                             69
  CLUS_2                           53                             61
  CLUS_3                           59                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 33(17Q23.3) MUTATED       45     60     44     16
  AMP PEAK 33(17Q23.3) WILD-TYPE     45     61     54     15
D33V4, multiclass
        clus
vv       AMP PEAK 33(17Q23.3) MUTATED AMP PEAK 33(17Q23.3) WILD-TYPE
  CLUS_1                           45                             45
  CLUS_2                           60                             61
  CLUS_3                           44                             54
  CLUS_4                           16                             15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 33(17Q23.3) MUTATED       31     67     18     44     32
  AMP PEAK 33(17Q23.3) WILD-TYPE     41     68     20     59     24
D33V5, multiclass
        clus
vv       AMP PEAK 33(17Q23.3) MUTATED AMP PEAK 33(17Q23.3) WILD-TYPE
  CLUS_1                           31                             41
  CLUS_2                           67                             68
  CLUS_3                           18                             20
  CLUS_4                           44                             59
  CLUS_5                           32                             24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 33(17Q23.3) MUTATED       58     58     76
  AMP PEAK 33(17Q23.3) WILD-TYPE     60     54     98
D33V6, multiclass
        clus
vv       AMP PEAK 33(17Q23.3) MUTATED AMP PEAK 33(17Q23.3) WILD-TYPE
  CLUS_1                           58                             60
  CLUS_2                           58                             54
  CLUS_3                           76                             98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 33(17Q23.3) MUTATED       45     39     58     14     37
  AMP PEAK 33(17Q23.3) WILD-TYPE     60     35     56     11     50
D33V7, multiclass
        clus
vv       AMP PEAK 33(17Q23.3) MUTATED AMP PEAK 33(17Q23.3) WILD-TYPE
  CLUS_1                           45                             60
  CLUS_2                           39                             35
  CLUS_3                           58                             56
  CLUS_4                           14                             11
  CLUS_5                           37                             50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 33(17Q23.3) MUTATED      121     46     26
  AMP PEAK 33(17Q23.3) WILD-TYPE    145     37     30
D33V8, multiclass
        clus
vv       AMP PEAK 33(17Q23.3) MUTATED AMP PEAK 33(17Q23.3) WILD-TYPE
  CLUS_1                          121                            145
  CLUS_2                           46                             37
  CLUS_3                           26                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 33(17Q23.3) MUTATED       57     30     66     37
  AMP PEAK 33(17Q23.3) WILD-TYPE     67     21     61     55
D33V9, multiclass
        clus
vv       AMP PEAK 33(17Q23.3) MUTATED AMP PEAK 33(17Q23.3) WILD-TYPE
  CLUS_1                           57                             67
  CLUS_2                           30                             21
  CLUS_3                           66                             61
  CLUS_4                           37                             55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 33(17Q23.3) MUTATED       38     33     22     67     30
  AMP PEAK 33(17Q23.3) WILD-TYPE     49     27     19     65     44
D33V10, multiclass
        clus
vv       AMP PEAK 33(17Q23.3) MUTATED AMP PEAK 33(17Q23.3) WILD-TYPE
  CLUS_1                           38                             49
  CLUS_2                           33                             27
  CLUS_3                           22                             19
  CLUS_4                           67                             65
  CLUS_5                           30                             44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = AMP PEAK 34(19Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 34(19Q12) MUTATED       37     87     17     22      1
  AMP PEAK 34(19Q12) WILD-TYPE     41     59    104     39      1
D34V1, multiclass
        clus
vv       AMP PEAK 34(19Q12) MUTATED AMP PEAK 34(19Q12) WILD-TYPE
  CLUS_1                         37                           41
  CLUS_2                         87                           59
  CLUS_3                         17                          104
  CLUS_4                         22                           39
  CLUS_5                          1                            1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 34(19Q12) MUTATED       43     68     24     29
  AMP PEAK 34(19Q12) WILD-TYPE     95     59     39     51
D34V2, multiclass
        clus
vv       AMP PEAK 34(19Q12) MUTATED AMP PEAK 34(19Q12) WILD-TYPE
  CLUS_1                         43                           95
  CLUS_2                         68                           59
  CLUS_3                         24                           39
  CLUS_4                         29                           51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 34(19Q12) MUTATED       45     43     49
  AMP PEAK 34(19Q12) WILD-TYPE     77     71     55
D34V3, multiclass
        clus
vv       AMP PEAK 34(19Q12) MUTATED AMP PEAK 34(19Q12) WILD-TYPE
  CLUS_1                         45                           77
  CLUS_2                         43                           71
  CLUS_3                         49                           55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 34(19Q12) MUTATED       40     48     38     11
  AMP PEAK 34(19Q12) WILD-TYPE     50     73     60     20
D34V4, multiclass
        clus
vv       AMP PEAK 34(19Q12) MUTATED AMP PEAK 34(19Q12) WILD-TYPE
  CLUS_1                         40                           50
  CLUS_2                         48                           73
  CLUS_3                         38                           60
  CLUS_4                         11                           20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 34(19Q12) MUTATED       29     61     13     34     27
  AMP PEAK 34(19Q12) WILD-TYPE     43     74     25     69     29
D34V5, multiclass
        clus
vv       AMP PEAK 34(19Q12) MUTATED AMP PEAK 34(19Q12) WILD-TYPE
  CLUS_1                         29                           43
  CLUS_2                         61                           74
  CLUS_3                         13                           25
  CLUS_4                         34                           69
  CLUS_5                         27                           29
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 34(19Q12) MUTATED       57     44     63
  AMP PEAK 34(19Q12) WILD-TYPE     61     68    111
D34V6, multiclass
        clus
vv       AMP PEAK 34(19Q12) MUTATED AMP PEAK 34(19Q12) WILD-TYPE
  CLUS_1                         57                           61
  CLUS_2                         44                           68
  CLUS_3                         63                          111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 34(19Q12) MUTATED       35     36     42     13     38
  AMP PEAK 34(19Q12) WILD-TYPE     70     38     72     12     49
D34V7, multiclass
        clus
vv       AMP PEAK 34(19Q12) MUTATED AMP PEAK 34(19Q12) WILD-TYPE
  CLUS_1                         35                           70
  CLUS_2                         36                           38
  CLUS_3                         42                           72
  CLUS_4                         13                           12
  CLUS_5                         38                           49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 34(19Q12) MUTATED       96     40     28
  AMP PEAK 34(19Q12) WILD-TYPE    170     43     28
D34V8, multiclass
        clus
vv       AMP PEAK 34(19Q12) MUTATED AMP PEAK 34(19Q12) WILD-TYPE
  CLUS_1                         96                          170
  CLUS_2                         40                           43
  CLUS_3                         28                           28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 34(19Q12) MUTATED       50     26     53     31
  AMP PEAK 34(19Q12) WILD-TYPE     74     25     74     61
D34V9, multiclass
        clus
vv       AMP PEAK 34(19Q12) MUTATED AMP PEAK 34(19Q12) WILD-TYPE
  CLUS_1                         50                           74
  CLUS_2                         26                           25
  CLUS_3                         53                           74
  CLUS_4                         31                           61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 34(19Q12) MUTATED       30     30     21     53     26
  AMP PEAK 34(19Q12) WILD-TYPE     57     30     20     79     48
D34V10, multiclass
        clus
vv       AMP PEAK 34(19Q12) MUTATED AMP PEAK 34(19Q12) WILD-TYPE
  CLUS_1                         30                           57
  CLUS_2                         30                           30
  CLUS_3                         21                           20
  CLUS_4                         53                           79
  CLUS_5                         26                           48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = AMP PEAK 35(19Q13.43) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 35(19Q13.43) MUTATED       35     80     18     22      0
  AMP PEAK 35(19Q13.43) WILD-TYPE     43     66    103     39      2
D35V1, multiclass
        clus
vv       AMP PEAK 35(19Q13.43) MUTATED AMP PEAK 35(19Q13.43) WILD-TYPE
  CLUS_1                            35                              43
  CLUS_2                            80                              66
  CLUS_3                            18                             103
  CLUS_4                            22                              39
  CLUS_5                             0                               2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 35(19Q13.43) MUTATED       39     61     21     34
  AMP PEAK 35(19Q13.43) WILD-TYPE     99     66     42     46
D35V2, multiclass
        clus
vv       AMP PEAK 35(19Q13.43) MUTATED AMP PEAK 35(19Q13.43) WILD-TYPE
  CLUS_1                            39                              99
  CLUS_2                            61                              66
  CLUS_3                            21                              42
  CLUS_4                            34                              46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 35(19Q13.43) MUTATED       39     46     48
  AMP PEAK 35(19Q13.43) WILD-TYPE     83     68     56
D35V3, multiclass
        clus
vv       AMP PEAK 35(19Q13.43) MUTATED AMP PEAK 35(19Q13.43) WILD-TYPE
  CLUS_1                            39                              83
  CLUS_2                            46                              68
  CLUS_3                            48                              56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 35(19Q13.43) MUTATED       31     49     42     11
  AMP PEAK 35(19Q13.43) WILD-TYPE     59     72     56     20
D35V4, multiclass
        clus
vv       AMP PEAK 35(19Q13.43) MUTATED AMP PEAK 35(19Q13.43) WILD-TYPE
  CLUS_1                            31                              59
  CLUS_2                            49                              72
  CLUS_3                            42                              56
  CLUS_4                            11                              20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 35(19Q13.43) MUTATED       22     59     14     36     24
  AMP PEAK 35(19Q13.43) WILD-TYPE     50     76     24     67     32
D35V5, multiclass
        clus
vv       AMP PEAK 35(19Q13.43) MUTATED AMP PEAK 35(19Q13.43) WILD-TYPE
  CLUS_1                            22                              50
  CLUS_2                            59                              76
  CLUS_3                            14                              24
  CLUS_4                            36                              67
  CLUS_5                            24                              32
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 35(19Q13.43) MUTATED       50     40     65
  AMP PEAK 35(19Q13.43) WILD-TYPE     68     72    109
D35V6, multiclass
        clus
vv       AMP PEAK 35(19Q13.43) MUTATED AMP PEAK 35(19Q13.43) WILD-TYPE
  CLUS_1                            50                              68
  CLUS_2                            40                              72
  CLUS_3                            65                             109
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 35(19Q13.43) MUTATED       33     37     45     11     29
  AMP PEAK 35(19Q13.43) WILD-TYPE     72     37     69     14     58
D35V7, multiclass
        clus
vv       AMP PEAK 35(19Q13.43) MUTATED AMP PEAK 35(19Q13.43) WILD-TYPE
  CLUS_1                            33                              72
  CLUS_2                            37                              37
  CLUS_3                            45                              69
  CLUS_4                            11                              14
  CLUS_5                            29                              58
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 35(19Q13.43) MUTATED       97     38     20
  AMP PEAK 35(19Q13.43) WILD-TYPE    169     45     36
D35V8, multiclass
        clus
vv       AMP PEAK 35(19Q13.43) MUTATED AMP PEAK 35(19Q13.43) WILD-TYPE
  CLUS_1                            97                             169
  CLUS_2                            38                              45
  CLUS_3                            20                              36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 35(19Q13.43) MUTATED       42     27     53     29
  AMP PEAK 35(19Q13.43) WILD-TYPE     82     24     74     63
D35V9, multiclass
        clus
vv       AMP PEAK 35(19Q13.43) MUTATED AMP PEAK 35(19Q13.43) WILD-TYPE
  CLUS_1                            42                              82
  CLUS_2                            27                              24
  CLUS_3                            53                              74
  CLUS_4                            29                              63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 35(19Q13.43) MUTATED       28     29     18     55     21
  AMP PEAK 35(19Q13.43) WILD-TYPE     59     31     23     77     53
D35V10, multiclass
        clus
vv       AMP PEAK 35(19Q13.43) MUTATED AMP PEAK 35(19Q13.43) WILD-TYPE
  CLUS_1                            28                              59
  CLUS_2                            29                              31
  CLUS_3                            18                              23
  CLUS_4                            55                              77
  CLUS_5                            21                              53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = AMP PEAK 36(20Q11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 36(20Q11.21) MUTATED       68    112     38     44      1
  AMP PEAK 36(20Q11.21) WILD-TYPE     10     34     83     17      1
D36V1, multiclass
        clus
vv       AMP PEAK 36(20Q11.21) MUTATED AMP PEAK 36(20Q11.21) WILD-TYPE
  CLUS_1                            68                              10
  CLUS_2                           112                              34
  CLUS_3                            38                              83
  CLUS_4                            44                              17
  CLUS_5                             1                               1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 36(20Q11.21) MUTATED       85     92     34     52
  AMP PEAK 36(20Q11.21) WILD-TYPE     53     35     29     28
D36V2, multiclass
        clus
vv       AMP PEAK 36(20Q11.21) MUTATED AMP PEAK 36(20Q11.21) WILD-TYPE
  CLUS_1                            85                              53
  CLUS_2                            92                              35
  CLUS_3                            34                              29
  CLUS_4                            52                              28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 36(20Q11.21) MUTATED       77     63     71
  AMP PEAK 36(20Q11.21) WILD-TYPE     45     51     33
D36V3, multiclass
        clus
vv       AMP PEAK 36(20Q11.21) MUTATED AMP PEAK 36(20Q11.21) WILD-TYPE
  CLUS_1                            77                              45
  CLUS_2                            63                              51
  CLUS_3                            71                              33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 36(20Q11.21) MUTATED       60     69     63     19
  AMP PEAK 36(20Q11.21) WILD-TYPE     30     52     35     12
D36V4, multiclass
        clus
vv       AMP PEAK 36(20Q11.21) MUTATED AMP PEAK 36(20Q11.21) WILD-TYPE
  CLUS_1                            60                              30
  CLUS_2                            69                              52
  CLUS_3                            63                              35
  CLUS_4                            19                              12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 36(20Q11.21) MUTATED       46     89     18     70     38
  AMP PEAK 36(20Q11.21) WILD-TYPE     26     46     20     33     18
D36V5, multiclass
        clus
vv       AMP PEAK 36(20Q11.21) MUTATED AMP PEAK 36(20Q11.21) WILD-TYPE
  CLUS_1                            46                              26
  CLUS_2                            89                              46
  CLUS_3                            18                              20
  CLUS_4                            70                              33
  CLUS_5                            38                              18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 36(20Q11.21) MUTATED       87     64    110
  AMP PEAK 36(20Q11.21) WILD-TYPE     31     48     64
D36V6, multiclass
        clus
vv       AMP PEAK 36(20Q11.21) MUTATED AMP PEAK 36(20Q11.21) WILD-TYPE
  CLUS_1                            87                              31
  CLUS_2                            64                              48
  CLUS_3                           110                              64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 36(20Q11.21) MUTATED       65     56     68     16     58
  AMP PEAK 36(20Q11.21) WILD-TYPE     40     18     46      9     29
D36V7, multiclass
        clus
vv       AMP PEAK 36(20Q11.21) MUTATED AMP PEAK 36(20Q11.21) WILD-TYPE
  CLUS_1                            65                              40
  CLUS_2                            56                              18
  CLUS_3                            68                              46
  CLUS_4                            16                               9
  CLUS_5                            58                              29
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 36(20Q11.21) MUTATED      165     61     37
  AMP PEAK 36(20Q11.21) WILD-TYPE    101     22     19
D36V8, multiclass
        clus
vv       AMP PEAK 36(20Q11.21) MUTATED AMP PEAK 36(20Q11.21) WILD-TYPE
  CLUS_1                           165                             101
  CLUS_2                            61                              22
  CLUS_3                            37                              19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 36(20Q11.21) MUTATED       83     41     76     59
  AMP PEAK 36(20Q11.21) WILD-TYPE     41     10     51     33
D36V9, multiclass
        clus
vv       AMP PEAK 36(20Q11.21) MUTATED AMP PEAK 36(20Q11.21) WILD-TYPE
  CLUS_1                            83                              41
  CLUS_2                            41                              10
  CLUS_3                            76                              51
  CLUS_4                            59                              33
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 36(20Q11.21) MUTATED       57     48     30     81     43
  AMP PEAK 36(20Q11.21) WILD-TYPE     30     12     11     51     31
D36V10, multiclass
        clus
vv       AMP PEAK 36(20Q11.21) MUTATED AMP PEAK 36(20Q11.21) WILD-TYPE
  CLUS_1                            57                              30
  CLUS_2                            48                              12
  CLUS_3                            30                              11
  CLUS_4                            81                              51
  CLUS_5                            43                              31
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = AMP PEAK 37(22Q12.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 37(22Q12.2) MUTATED       17     45     10     15      0
  AMP PEAK 37(22Q12.2) WILD-TYPE     61    101    111     46      2
D37V1, multiclass
        clus
vv       AMP PEAK 37(22Q12.2) MUTATED AMP PEAK 37(22Q12.2) WILD-TYPE
  CLUS_1                           17                             61
  CLUS_2                           45                            101
  CLUS_3                           10                            111
  CLUS_4                           15                             46
  CLUS_5                            0                              2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 37(22Q12.2) MUTATED       20     36     13     18
  AMP PEAK 37(22Q12.2) WILD-TYPE    118     91     50     62
D37V2, multiclass
        clus
vv       AMP PEAK 37(22Q12.2) MUTATED AMP PEAK 37(22Q12.2) WILD-TYPE
  CLUS_1                           20                            118
  CLUS_2                           36                             91
  CLUS_3                           13                             50
  CLUS_4                           18                             62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 37(22Q12.2) MUTATED       24     21     23
  AMP PEAK 37(22Q12.2) WILD-TYPE     98     93     81
D37V3, multiclass
        clus
vv       AMP PEAK 37(22Q12.2) MUTATED AMP PEAK 37(22Q12.2) WILD-TYPE
  CLUS_1                           24                             98
  CLUS_2                           21                             93
  CLUS_3                           23                             81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 37(22Q12.2) MUTATED       16     28     19      5
  AMP PEAK 37(22Q12.2) WILD-TYPE     74     93     79     26
D37V4, multiclass
        clus
vv       AMP PEAK 37(22Q12.2) MUTATED AMP PEAK 37(22Q12.2) WILD-TYPE
  CLUS_1                           16                             74
  CLUS_2                           28                             93
  CLUS_3                           19                             79
  CLUS_4                            5                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 37(22Q12.2) MUTATED       12     38      5     19     12
  AMP PEAK 37(22Q12.2) WILD-TYPE     60     97     33     84     44
D37V5, multiclass
        clus
vv       AMP PEAK 37(22Q12.2) MUTATED AMP PEAK 37(22Q12.2) WILD-TYPE
  CLUS_1                           12                             60
  CLUS_2                           38                             97
  CLUS_3                            5                             33
  CLUS_4                           19                             84
  CLUS_5                           12                             44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 37(22Q12.2) MUTATED       32     26     28
  AMP PEAK 37(22Q12.2) WILD-TYPE     86     86    146
D37V6, multiclass
        clus
vv       AMP PEAK 37(22Q12.2) MUTATED AMP PEAK 37(22Q12.2) WILD-TYPE
  CLUS_1                           32                             86
  CLUS_2                           26                             86
  CLUS_3                           28                            146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 37(22Q12.2) MUTATED       19     16     34      3     14
  AMP PEAK 37(22Q12.2) WILD-TYPE     86     58     80     22     73
D37V7, multiclass
        clus
vv       AMP PEAK 37(22Q12.2) MUTATED AMP PEAK 37(22Q12.2) WILD-TYPE
  CLUS_1                           19                             86
  CLUS_2                           16                             58
  CLUS_3                           34                             80
  CLUS_4                            3                             22
  CLUS_5                           14                             73
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 37(22Q12.2) MUTATED       59     16     11
  AMP PEAK 37(22Q12.2) WILD-TYPE    207     67     45
D37V8, multiclass
        clus
vv       AMP PEAK 37(22Q12.2) MUTATED AMP PEAK 37(22Q12.2) WILD-TYPE
  CLUS_1                           59                            207
  CLUS_2                           16                             67
  CLUS_3                           11                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 37(22Q12.2) MUTATED       26     12     32     15
  AMP PEAK 37(22Q12.2) WILD-TYPE     98     39     95     77
D37V9, multiclass
        clus
vv       AMP PEAK 37(22Q12.2) MUTATED AMP PEAK 37(22Q12.2) WILD-TYPE
  CLUS_1                           26                             98
  CLUS_2                           12                             39
  CLUS_3                           32                             95
  CLUS_4                           15                             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 37(22Q12.2) MUTATED       18     13      8     32     14
  AMP PEAK 37(22Q12.2) WILD-TYPE     69     47     33    100     60
D37V10, multiclass
        clus
vv       AMP PEAK 37(22Q12.2) MUTATED AMP PEAK 37(22Q12.2) WILD-TYPE
  CLUS_1                           18                             69
  CLUS_2                           13                             47
  CLUS_3                            8                             33
  CLUS_4                           32                            100
  CLUS_5                           14                             60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = DEL PEAK  1(1P36.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.11) MUTATED       18     38     18     17      0
  DEL PEAK  1(1P36.11) WILD-TYPE     60    108    103     44      2
D38V1, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           18                             60
  CLUS_2                           38                            108
  CLUS_3                           18                            103
  CLUS_4                           17                             44
  CLUS_5                            0                              2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       35     36     11      9
  DEL PEAK  1(1P36.11) WILD-TYPE    103     91     52     71
D38V2, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           35                            103
  CLUS_2                           36                             91
  CLUS_3                           11                             52
  CLUS_4                            9                             71
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       27     19     30
  DEL PEAK  1(1P36.11) WILD-TYPE     95     95     74
D38V3, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           27                             95
  CLUS_2                           19                             95
  CLUS_3                           30                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       24     21     25      6
  DEL PEAK  1(1P36.11) WILD-TYPE     66    100     73     25
D38V4, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           24                             66
  CLUS_2                           21                            100
  CLUS_3                           25                             73
  CLUS_4                            6                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.11) MUTATED       10     34      4     27     15
  DEL PEAK  1(1P36.11) WILD-TYPE     62    101     34     76     41
D38V5, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           10                             62
  CLUS_2                           34                            101
  CLUS_3                            4                             34
  CLUS_4                           27                             76
  CLUS_5                           15                             41
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       26     24     40
  DEL PEAK  1(1P36.11) WILD-TYPE     92     88    134
D38V6, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           26                             92
  CLUS_2                           24                             88
  CLUS_3                           40                            134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.11) MUTATED       26     20     25      6     13
  DEL PEAK  1(1P36.11) WILD-TYPE     79     54     89     19     74
D38V7, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           26                             79
  CLUS_2                           20                             54
  CLUS_3                           25                             89
  CLUS_4                            6                             19
  CLUS_5                           13                             74
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       62     22      6
  DEL PEAK  1(1P36.11) WILD-TYPE    204     61     50
D38V8, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           62                            204
  CLUS_2                           22                             61
  CLUS_3                            6                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       21     13     29     22
  DEL PEAK  1(1P36.11) WILD-TYPE    103     38     98     70
D38V9, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           21                            103
  CLUS_2                           13                             38
  CLUS_3                           29                             98
  CLUS_4                           22                             70
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.11) MUTATED       16     17      8     28     16
  DEL PEAK  1(1P36.11) WILD-TYPE     71     43     33    104     58
D38V10, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           16                             71
  CLUS_2                           17                             43
  CLUS_3                            8                             33
  CLUS_4                           28                            104
  CLUS_5                           16                             58
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = DEL PEAK  2(1Q32.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1Q32.1) MUTATED       16     33      7     16      0
  DEL PEAK  2(1Q32.1) WILD-TYPE     62    113    114     45      2
D39V1, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          16                            62
  CLUS_2                          33                           113
  CLUS_3                           7                           114
  CLUS_4                          16                            45
  CLUS_5                           0                             2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1Q32.1) MUTATED       18     33     11     10
  DEL PEAK  2(1Q32.1) WILD-TYPE    120     94     52     70
D39V2, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          18                           120
  CLUS_2                          33                            94
  CLUS_3                          11                            52
  CLUS_4                          10                            70
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1Q32.1) MUTATED       24     17     16
  DEL PEAK  2(1Q32.1) WILD-TYPE     98     97     88
D39V3, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          24                            98
  CLUS_2                          17                            97
  CLUS_3                          16                            88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1Q32.1) MUTATED       17     24     10      6
  DEL PEAK  2(1Q32.1) WILD-TYPE     73     97     88     25
D39V4, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          17                            73
  CLUS_2                          24                            97
  CLUS_3                          10                            88
  CLUS_4                           6                            25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1Q32.1) MUTATED        9     30      5     17     10
  DEL PEAK  2(1Q32.1) WILD-TYPE     63    105     33     86     46
D39V5, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                           9                            63
  CLUS_2                          30                           105
  CLUS_3                           5                            33
  CLUS_4                          17                            86
  CLUS_5                          10                            46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1Q32.1) MUTATED       28     21     22
  DEL PEAK  2(1Q32.1) WILD-TYPE     90     91    152
D39V6, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          28                            90
  CLUS_2                          21                            91
  CLUS_3                          22                           152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1Q32.1) MUTATED       14     17     21      6     14
  DEL PEAK  2(1Q32.1) WILD-TYPE     91     57     93     19     73
D39V7, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          14                            91
  CLUS_2                          17                            57
  CLUS_3                          21                            93
  CLUS_4                           6                            19
  CLUS_5                          14                            73
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1Q32.1) MUTATED       45     17     10
  DEL PEAK  2(1Q32.1) WILD-TYPE    221     66     46
D39V8, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          45                           221
  CLUS_2                          17                            66
  CLUS_3                          10                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1Q32.1) MUTATED       19     10     27     14
  DEL PEAK  2(1Q32.1) WILD-TYPE    105     41    100     78
D39V9, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          19                           105
  CLUS_2                          10                            41
  CLUS_3                          27                           100
  CLUS_4                          14                            78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1Q32.1) MUTATED       14     13      6     27     10
  DEL PEAK  2(1Q32.1) WILD-TYPE     73     47     35    105     64
D39V10, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          14                            73
  CLUS_2                          13                            47
  CLUS_3                           6                            35
  CLUS_4                          27                           105
  CLUS_5                          10                            64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = DEL PEAK  3(2Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(2Q22.1) MUTATED       29     55     24     24      2
  DEL PEAK  3(2Q22.1) WILD-TYPE     49     91     97     37      0
D40V1, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          29                            49
  CLUS_2                          55                            91
  CLUS_3                          24                            97
  CLUS_4                          24                            37
  CLUS_5                           2                             0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2Q22.1) MUTATED       36     57     18     23
  DEL PEAK  3(2Q22.1) WILD-TYPE    102     70     45     57
D40V2, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          36                           102
  CLUS_2                          57                            70
  CLUS_3                          18                            45
  CLUS_4                          23                            57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED       43     33     37
  DEL PEAK  3(2Q22.1) WILD-TYPE     79     81     67
D40V3, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          43                            79
  CLUS_2                          33                            81
  CLUS_3                          37                            67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2Q22.1) MUTATED       31     39     32     11
  DEL PEAK  3(2Q22.1) WILD-TYPE     59     82     66     20
D40V4, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          31                            59
  CLUS_2                          39                            82
  CLUS_3                          32                            66
  CLUS_4                          11                            20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(2Q22.1) MUTATED       21     51      8     22     30
  DEL PEAK  3(2Q22.1) WILD-TYPE     51     84     30     81     26
D40V5, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          21                            51
  CLUS_2                          51                            84
  CLUS_3                           8                            30
  CLUS_4                          22                            81
  CLUS_5                          30                            26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED       44     40     48
  DEL PEAK  3(2Q22.1) WILD-TYPE     74     72    126
D40V6, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          44                            74
  CLUS_2                          40                            72
  CLUS_3                          48                           126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(2Q22.1) MUTATED       31     23     46     10     22
  DEL PEAK  3(2Q22.1) WILD-TYPE     74     51     68     15     65
D40V7, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          31                            74
  CLUS_2                          23                            51
  CLUS_3                          46                            68
  CLUS_4                          10                            15
  CLUS_5                          22                            65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED       92     26     14
  DEL PEAK  3(2Q22.1) WILD-TYPE    174     57     42
D40V8, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          92                           174
  CLUS_2                          26                            57
  CLUS_3                          14                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2Q22.1) MUTATED       32     15     52     28
  DEL PEAK  3(2Q22.1) WILD-TYPE     92     36     75     64
D40V9, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          32                            92
  CLUS_2                          15                            36
  CLUS_3                          52                            75
  CLUS_4                          28                            64
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(2Q22.1) MUTATED       24     18     12     48     25
  DEL PEAK  3(2Q22.1) WILD-TYPE     63     42     29     84     49
D40V10, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          24                            63
  CLUS_2                          18                            42
  CLUS_3                          12                            29
  CLUS_4                          48                            84
  CLUS_5                          25                            49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = DEL PEAK  4(2Q34) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(2Q34) MUTATED       33     85     19     36      1
  DEL PEAK  4(2Q34) WILD-TYPE     45     61    102     25      1
D41V1, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                        33                          45
  CLUS_2                        85                          61
  CLUS_3                        19                         102
  CLUS_4                        36                          25
  CLUS_5                         1                           1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q34) MUTATED       47     72     21     34
  DEL PEAK  4(2Q34) WILD-TYPE     91     55     42     46
D41V2, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                        47                          91
  CLUS_2                        72                          55
  CLUS_3                        21                          42
  CLUS_4                        34                          46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q34) MUTATED       45     39     56
  DEL PEAK  4(2Q34) WILD-TYPE     77     75     48
D41V3, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                        45                          77
  CLUS_2                        39                          75
  CLUS_3                        56                          48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q34) MUTATED       36     48     46     10
  DEL PEAK  4(2Q34) WILD-TYPE     54     73     52     21
D41V4, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                        36                          54
  CLUS_2                        48                          73
  CLUS_3                        46                          52
  CLUS_4                        10                          21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(2Q34) MUTATED       29     64      7     42     30
  DEL PEAK  4(2Q34) WILD-TYPE     43     71     31     61     26
D41V5, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                        29                          43
  CLUS_2                        64                          71
  CLUS_3                         7                          31
  CLUS_4                        42                          61
  CLUS_5                        30                          26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q34) MUTATED       57     51     64
  DEL PEAK  4(2Q34) WILD-TYPE     61     61    110
D41V6, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                        57                          61
  CLUS_2                        51                          61
  CLUS_3                        64                         110
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(2Q34) MUTATED       45     35     49     13     31
  DEL PEAK  4(2Q34) WILD-TYPE     60     39     65     12     56
D41V7, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                        45                          60
  CLUS_2                        35                          39
  CLUS_3                        49                          65
  CLUS_4                        13                          12
  CLUS_5                        31                          56
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q34) MUTATED      113     40     20
  DEL PEAK  4(2Q34) WILD-TYPE    153     43     36
D41V8, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                       113                         153
  CLUS_2                        40                          43
  CLUS_3                        20                          36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q34) MUTATED       47     25     57     39
  DEL PEAK  4(2Q34) WILD-TYPE     77     26     70     53
D41V9, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                        47                          77
  CLUS_2                        25                          26
  CLUS_3                        57                          70
  CLUS_4                        39                          53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(2Q34) MUTATED       36     27     15     58     32
  DEL PEAK  4(2Q34) WILD-TYPE     51     33     26     74     42
D41V10, multiclass
        clus
vv       DEL PEAK  4(2Q34) MUTATED DEL PEAK  4(2Q34) WILD-TYPE
  CLUS_1                        36                          51
  CLUS_2                        27                          33
  CLUS_3                        15                          26
  CLUS_4                        58                          74
  CLUS_5                        32                          42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = DEL PEAK  5(2Q37.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(2Q37.1) MUTATED       40    100     28     38      1
  DEL PEAK  5(2Q37.1) WILD-TYPE     38     46     93     23      1
D42V1, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          40                            38
  CLUS_2                         100                            46
  CLUS_3                          28                            93
  CLUS_4                          38                            23
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED       54     80     27     46
  DEL PEAK  5(2Q37.1) WILD-TYPE     84     47     36     34
D42V2, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          54                            84
  CLUS_2                          80                            47
  CLUS_3                          27                            36
  CLUS_4                          46                            34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       55     49     61
  DEL PEAK  5(2Q37.1) WILD-TYPE     67     65     43
D42V3, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          55                            67
  CLUS_2                          49                            65
  CLUS_3                          61                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED       42     60     51     12
  DEL PEAK  5(2Q37.1) WILD-TYPE     48     61     47     19
D42V4, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          42                            48
  CLUS_2                          60                            61
  CLUS_3                          51                            47
  CLUS_4                          12                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(2Q37.1) MUTATED       32     79     13     47     33
  DEL PEAK  5(2Q37.1) WILD-TYPE     40     56     25     56     23
D42V5, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          32                            40
  CLUS_2                          79                            56
  CLUS_3                          13                            25
  CLUS_4                          47                            56
  CLUS_5                          33                            23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       62     65     77
  DEL PEAK  5(2Q37.1) WILD-TYPE     56     47     97
D42V6, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          62                            56
  CLUS_2                          65                            47
  CLUS_3                          77                            97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(2Q37.1) MUTATED       50     43     61     15     37
  DEL PEAK  5(2Q37.1) WILD-TYPE     55     31     53     10     50
D42V7, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          50                            55
  CLUS_2                          43                            31
  CLUS_3                          61                            53
  CLUS_4                          15                            10
  CLUS_5                          37                            50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED      135     49     22
  DEL PEAK  5(2Q37.1) WILD-TYPE    131     34     34
D42V8, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                         135                           131
  CLUS_2                          49                            34
  CLUS_3                          22                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED       58     27     73     43
  DEL PEAK  5(2Q37.1) WILD-TYPE     66     24     54     49
D42V9, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          58                            66
  CLUS_2                          27                            24
  CLUS_3                          73                            54
  CLUS_4                          43                            49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(2Q37.1) MUTATED       41     33     17     75     35
  DEL PEAK  5(2Q37.1) WILD-TYPE     46     27     24     57     39
D42V10, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          41                            46
  CLUS_2                          33                            27
  CLUS_3                          17                            24
  CLUS_4                          75                            57
  CLUS_5                          35                            39
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = DEL PEAK  6(3P14.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(3P14.2) MUTATED       23     60     18     15      1
  DEL PEAK  6(3P14.2) WILD-TYPE     55     86    103     46      1
D43V1, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          23                            55
  CLUS_2                          60                            86
  CLUS_3                          18                           103
  CLUS_4                          15                            46
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P14.2) MUTATED       50     28     13     26
  DEL PEAK  6(3P14.2) WILD-TYPE     88     99     50     54
D43V2, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          50                            88
  CLUS_2                          28                            99
  CLUS_3                          13                            50
  CLUS_4                          26                            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P14.2) MUTATED       37     18     42
  DEL PEAK  6(3P14.2) WILD-TYPE     85     96     62
D43V3, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          37                            85
  CLUS_2                          18                            96
  CLUS_3                          42                            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P14.2) MUTATED       28     22     35     12
  DEL PEAK  6(3P14.2) WILD-TYPE     62     99     63     19
D43V4, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          28                            62
  CLUS_2                          22                            99
  CLUS_3                          35                            63
  CLUS_4                          12                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(3P14.2) MUTATED       12     24     15     48     16
  DEL PEAK  6(3P14.2) WILD-TYPE     60    111     23     55     40
D43V5, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          12                            60
  CLUS_2                          24                           111
  CLUS_3                          15                            23
  CLUS_4                          48                            55
  CLUS_5                          16                            40
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P14.2) MUTATED       27     19     69
  DEL PEAK  6(3P14.2) WILD-TYPE     91     93    105
D43V6, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          27                            91
  CLUS_2                          19                            93
  CLUS_3                          69                           105
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(3P14.2) MUTATED       46     22     21      8     20
  DEL PEAK  6(3P14.2) WILD-TYPE     59     52     93     17     67
D43V7, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          46                            59
  CLUS_2                          22                            52
  CLUS_3                          21                            93
  CLUS_4                           8                            17
  CLUS_5                          20                            67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P14.2) MUTATED       83     23     11
  DEL PEAK  6(3P14.2) WILD-TYPE    183     60     45
D43V8, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          83                           183
  CLUS_2                          23                            60
  CLUS_3                          11                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P14.2) MUTATED       29     13     29     44
  DEL PEAK  6(3P14.2) WILD-TYPE     95     38     98     48
D43V9, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          29                            95
  CLUS_2                          13                            38
  CLUS_3                          29                            98
  CLUS_4                          44                            48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(3P14.2) MUTATED       16     16     16     31     36
  DEL PEAK  6(3P14.2) WILD-TYPE     71     44     25    101     38
D43V10, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          16                            71
  CLUS_2                          16                            44
  CLUS_3                          16                            25
  CLUS_4                          31                           101
  CLUS_5                          36                            38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = DEL PEAK  7(4Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(4Q22.1) MUTATED       36     74     16     34      1
  DEL PEAK  7(4Q22.1) WILD-TYPE     42     72    105     27      1
D44V1, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                          36                            42
  CLUS_2                          74                            72
  CLUS_3                          16                           105
  CLUS_4                          34                            27
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(4Q22.1) MUTATED       59     56     17     29
  DEL PEAK  7(4Q22.1) WILD-TYPE     79     71     46     51
D44V2, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                          59                            79
  CLUS_2                          56                            71
  CLUS_3                          17                            46
  CLUS_4                          29                            51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(4Q22.1) MUTATED       51     27     48
  DEL PEAK  7(4Q22.1) WILD-TYPE     71     87     56
D44V3, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                          51                            71
  CLUS_2                          27                            87
  CLUS_3                          48                            56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(4Q22.1) MUTATED       43     34     41      8
  DEL PEAK  7(4Q22.1) WILD-TYPE     47     87     57     23
D44V4, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                          43                            47
  CLUS_2                          34                            87
  CLUS_3                          41                            57
  CLUS_4                           8                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(4Q22.1) MUTATED       26     44     10     50     28
  DEL PEAK  7(4Q22.1) WILD-TYPE     46     91     28     53     28
D44V5, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                          26                            46
  CLUS_2                          44                            91
  CLUS_3                          10                            28
  CLUS_4                          50                            53
  CLUS_5                          28                            28
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(4Q22.1) MUTATED       52     28     78
  DEL PEAK  7(4Q22.1) WILD-TYPE     66     84     96
D44V6, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                          52                            66
  CLUS_2                          28                            84
  CLUS_3                          78                            96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(4Q22.1) MUTATED       53     27     33     13     35
  DEL PEAK  7(4Q22.1) WILD-TYPE     52     47     81     12     52
D44V7, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                          53                            52
  CLUS_2                          27                            47
  CLUS_3                          33                            81
  CLUS_4                          13                            12
  CLUS_5                          35                            52
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(4Q22.1) MUTATED      106     31     24
  DEL PEAK  7(4Q22.1) WILD-TYPE    160     52     32
D44V8, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                         106                           160
  CLUS_2                          31                            52
  CLUS_3                          24                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(4Q22.1) MUTATED       53     17     41     44
  DEL PEAK  7(4Q22.1) WILD-TYPE     71     34     86     48
D44V9, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                          53                            71
  CLUS_2                          17                            34
  CLUS_3                          41                            86
  CLUS_4                          44                            48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(4Q22.1) MUTATED       32     22     17     43     41
  DEL PEAK  7(4Q22.1) WILD-TYPE     55     38     24     89     33
D44V10, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                          32                            55
  CLUS_2                          22                            38
  CLUS_3                          17                            24
  CLUS_4                          43                            89
  CLUS_5                          41                            33
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = DEL PEAK  8(4Q34.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(4Q34.2) MUTATED       36     85     16     39      1
  DEL PEAK  8(4Q34.2) WILD-TYPE     42     61    105     22      1
D45V1, multiclass
        clus
vv       DEL PEAK  8(4Q34.2) MUTATED DEL PEAK  8(4Q34.2) WILD-TYPE
  CLUS_1                          36                            42
  CLUS_2                          85                            61
  CLUS_3                          16                           105
  CLUS_4                          39                            22
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(4Q34.2) MUTATED       58     66     20     33
  DEL PEAK  8(4Q34.2) WILD-TYPE     80     61     43     47
D45V2, multiclass
        clus
vv       DEL PEAK  8(4Q34.2) MUTATED DEL PEAK  8(4Q34.2) WILD-TYPE
  CLUS_1                          58                            80
  CLUS_2                          66                            61
  CLUS_3                          20                            43
  CLUS_4                          33                            47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(4Q34.2) MUTATED       54     38     50
  DEL PEAK  8(4Q34.2) WILD-TYPE     68     76     54
D45V3, multiclass
        clus
vv       DEL PEAK  8(4Q34.2) MUTATED DEL PEAK  8(4Q34.2) WILD-TYPE
  CLUS_1                          54                            68
  CLUS_2                          38                            76
  CLUS_3                          50                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(4Q34.2) MUTATED       46     47     41      8
  DEL PEAK  8(4Q34.2) WILD-TYPE     44     74     57     23
D45V4, multiclass
        clus
vv       DEL PEAK  8(4Q34.2) MUTATED DEL PEAK  8(4Q34.2) WILD-TYPE
  CLUS_1                          46                            44
  CLUS_2                          47                            74
  CLUS_3                          41                            57
  CLUS_4                           8                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(4Q34.2) MUTATED       25     58     13     54     24
  DEL PEAK  8(4Q34.2) WILD-TYPE     47     77     25     49     32
D45V5, multiclass
        clus
vv       DEL PEAK  8(4Q34.2) MUTATED DEL PEAK  8(4Q34.2) WILD-TYPE
  CLUS_1                          25                            47
  CLUS_2                          58                            77
  CLUS_3                          13                            25
  CLUS_4                          54                            49
  CLUS_5                          24                            32
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(4Q34.2) MUTATED       55     37     82
  DEL PEAK  8(4Q34.2) WILD-TYPE     63     75     92
D45V6, multiclass
        clus
vv       DEL PEAK  8(4Q34.2) MUTATED DEL PEAK  8(4Q34.2) WILD-TYPE
  CLUS_1                          55                            63
  CLUS_2                          37                            75
  CLUS_3                          82                            92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(4Q34.2) MUTATED       48     37     40     14     37
  DEL PEAK  8(4Q34.2) WILD-TYPE     57     37     74     11     50
D45V7, multiclass
        clus
vv       DEL PEAK  8(4Q34.2) MUTATED DEL PEAK  8(4Q34.2) WILD-TYPE
  CLUS_1                          48                            57
  CLUS_2                          37                            37
  CLUS_3                          40                            74
  CLUS_4                          14                            11
  CLUS_5                          37                            50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(4Q34.2) MUTATED      112     40     24
  DEL PEAK  8(4Q34.2) WILD-TYPE    154     43     32
D45V8, multiclass
        clus
vv       DEL PEAK  8(4Q34.2) MUTATED DEL PEAK  8(4Q34.2) WILD-TYPE
  CLUS_1                         112                           154
  CLUS_2                          40                            43
  CLUS_3                          24                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(4Q34.2) MUTATED       55     24     48     43
  DEL PEAK  8(4Q34.2) WILD-TYPE     69     27     79     49
D45V9, multiclass
        clus
vv       DEL PEAK  8(4Q34.2) MUTATED DEL PEAK  8(4Q34.2) WILD-TYPE
  CLUS_1                          55                            69
  CLUS_2                          24                            27
  CLUS_3                          48                            79
  CLUS_4                          43                            49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(4Q34.2) MUTATED       32     28     20     50     40
  DEL PEAK  8(4Q34.2) WILD-TYPE     55     32     21     82     34
D45V10, multiclass
        clus
vv       DEL PEAK  8(4Q34.2) MUTATED DEL PEAK  8(4Q34.2) WILD-TYPE
  CLUS_1                          32                            55
  CLUS_2                          28                            32
  CLUS_3                          20                            21
  CLUS_4                          50                            82
  CLUS_5                          40                            34
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = DEL PEAK  9(5Q12.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(5Q12.1) MUTATED       46    102     21     32      1
  DEL PEAK  9(5Q12.1) WILD-TYPE     32     44    100     29      1
D46V1, multiclass
        clus
vv       DEL PEAK  9(5Q12.1) MUTATED DEL PEAK  9(5Q12.1) WILD-TYPE
  CLUS_1                          46                            32
  CLUS_2                         102                            44
  CLUS_3                          21                           100
  CLUS_4                          32                            29
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(5Q12.1) MUTATED       66     79     21     36
  DEL PEAK  9(5Q12.1) WILD-TYPE     72     48     42     44
D46V2, multiclass
        clus
vv       DEL PEAK  9(5Q12.1) MUTATED DEL PEAK  9(5Q12.1) WILD-TYPE
  CLUS_1                          66                            72
  CLUS_2                          79                            48
  CLUS_3                          21                            42
  CLUS_4                          36                            44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(5Q12.1) MUTATED       61     47     59
  DEL PEAK  9(5Q12.1) WILD-TYPE     61     67     45
D46V3, multiclass
        clus
vv       DEL PEAK  9(5Q12.1) MUTATED DEL PEAK  9(5Q12.1) WILD-TYPE
  CLUS_1                          61                            61
  CLUS_2                          47                            67
  CLUS_3                          59                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(5Q12.1) MUTATED       49     54     52     12
  DEL PEAK  9(5Q12.1) WILD-TYPE     41     67     46     19
D46V4, multiclass
        clus
vv       DEL PEAK  9(5Q12.1) MUTATED DEL PEAK  9(5Q12.1) WILD-TYPE
  CLUS_1                          49                            41
  CLUS_2                          54                            67
  CLUS_3                          52                            46
  CLUS_4                          12                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(5Q12.1) MUTATED       40     65     15     50     31
  DEL PEAK  9(5Q12.1) WILD-TYPE     32     70     23     53     25
D46V5, multiclass
        clus
vv       DEL PEAK  9(5Q12.1) MUTATED DEL PEAK  9(5Q12.1) WILD-TYPE
  CLUS_1                          40                            32
  CLUS_2                          65                            70
  CLUS_3                          15                            23
  CLUS_4                          50                            53
  CLUS_5                          31                            25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(5Q12.1) MUTATED       73     46     82
  DEL PEAK  9(5Q12.1) WILD-TYPE     45     66     92
D46V6, multiclass
        clus
vv       DEL PEAK  9(5Q12.1) MUTATED DEL PEAK  9(5Q12.1) WILD-TYPE
  CLUS_1                          73                            45
  CLUS_2                          46                            66
  CLUS_3                          82                            92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(5Q12.1) MUTATED       45     49     46     17     45
  DEL PEAK  9(5Q12.1) WILD-TYPE     60     25     68      8     42
D46V7, multiclass
        clus
vv       DEL PEAK  9(5Q12.1) MUTATED DEL PEAK  9(5Q12.1) WILD-TYPE
  CLUS_1                          45                            60
  CLUS_2                          49                            25
  CLUS_3                          46                            68
  CLUS_4                          17                             8
  CLUS_5                          45                            42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(5Q12.1) MUTATED      119     52     31
  DEL PEAK  9(5Q12.1) WILD-TYPE    147     31     25
D46V8, multiclass
        clus
vv       DEL PEAK  9(5Q12.1) MUTATED DEL PEAK  9(5Q12.1) WILD-TYPE
  CLUS_1                         119                           147
  CLUS_2                          52                            31
  CLUS_3                          31                            25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(5Q12.1) MUTATED       68     31     59     41
  DEL PEAK  9(5Q12.1) WILD-TYPE     56     20     68     51
D46V9, multiclass
        clus
vv       DEL PEAK  9(5Q12.1) MUTATED DEL PEAK  9(5Q12.1) WILD-TYPE
  CLUS_1                          68                            56
  CLUS_2                          31                            20
  CLUS_3                          59                            68
  CLUS_4                          41                            51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(5Q12.1) MUTATED       41     39     25     59     35
  DEL PEAK  9(5Q12.1) WILD-TYPE     46     21     16     73     39
D46V10, multiclass
        clus
vv       DEL PEAK  9(5Q12.1) MUTATED DEL PEAK  9(5Q12.1) WILD-TYPE
  CLUS_1                          41                            46
  CLUS_2                          39                            21
  CLUS_3                          25                            16
  CLUS_4                          59                            73
  CLUS_5                          35                            39
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = DEL PEAK 10(6P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(6P25.3) MUTATED       36     47      7     15      1
  DEL PEAK 10(6P25.3) WILD-TYPE     42     99    114     46      1
D47V1, multiclass
        clus
vv       DEL PEAK 10(6P25.3) MUTATED DEL PEAK 10(6P25.3) WILD-TYPE
  CLUS_1                          36                            42
  CLUS_2                          47                            99
  CLUS_3                           7                           114
  CLUS_4                          15                            46
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(6P25.3) MUTATED       25     51     14     16
  DEL PEAK 10(6P25.3) WILD-TYPE    113     76     49     64
D47V2, multiclass
        clus
vv       DEL PEAK 10(6P25.3) MUTATED DEL PEAK 10(6P25.3) WILD-TYPE
  CLUS_1                          25                           113
  CLUS_2                          51                            76
  CLUS_3                          14                            49
  CLUS_4                          16                            64
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(6P25.3) MUTATED       34     24     38
  DEL PEAK 10(6P25.3) WILD-TYPE     88     90     66
D47V3, multiclass
        clus
vv       DEL PEAK 10(6P25.3) MUTATED DEL PEAK 10(6P25.3) WILD-TYPE
  CLUS_1                          34                            88
  CLUS_2                          24                            90
  CLUS_3                          38                            66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(6P25.3) MUTATED       28     33     26      9
  DEL PEAK 10(6P25.3) WILD-TYPE     62     88     72     22
D47V4, multiclass
        clus
vv       DEL PEAK 10(6P25.3) MUTATED DEL PEAK 10(6P25.3) WILD-TYPE
  CLUS_1                          28                            62
  CLUS_2                          33                            88
  CLUS_3                          26                            72
  CLUS_4                           9                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(6P25.3) MUTATED       13     36      8     24     23
  DEL PEAK 10(6P25.3) WILD-TYPE     59     99     30     79     33
D47V5, multiclass
        clus
vv       DEL PEAK 10(6P25.3) MUTATED DEL PEAK 10(6P25.3) WILD-TYPE
  CLUS_1                          13                            59
  CLUS_2                          36                            99
  CLUS_3                           8                            30
  CLUS_4                          24                            79
  CLUS_5                          23                            33
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(6P25.3) MUTATED       42     26     36
  DEL PEAK 10(6P25.3) WILD-TYPE     76     86    138
D47V6, multiclass
        clus
vv       DEL PEAK 10(6P25.3) MUTATED DEL PEAK 10(6P25.3) WILD-TYPE
  CLUS_1                          42                            76
  CLUS_2                          26                            86
  CLUS_3                          36                           138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(6P25.3) MUTATED       24     25     26      7     23
  DEL PEAK 10(6P25.3) WILD-TYPE     81     49     88     18     64
D47V7, multiclass
        clus
vv       DEL PEAK 10(6P25.3) MUTATED DEL PEAK 10(6P25.3) WILD-TYPE
  CLUS_1                          24                            81
  CLUS_2                          25                            49
  CLUS_3                          26                            88
  CLUS_4                           7                            18
  CLUS_5                          23                            64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(6P25.3) MUTATED       64     26     15
  DEL PEAK 10(6P25.3) WILD-TYPE    202     57     41
D47V8, multiclass
        clus
vv       DEL PEAK 10(6P25.3) MUTATED DEL PEAK 10(6P25.3) WILD-TYPE
  CLUS_1                          64                           202
  CLUS_2                          26                            57
  CLUS_3                          15                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(6P25.3) MUTATED       38     15     31     19
  DEL PEAK 10(6P25.3) WILD-TYPE     86     36     96     73
D47V9, multiclass
        clus
vv       DEL PEAK 10(6P25.3) MUTATED DEL PEAK 10(6P25.3) WILD-TYPE
  CLUS_1                          38                            86
  CLUS_2                          15                            36
  CLUS_3                          31                            96
  CLUS_4                          19                            73
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(6P25.3) MUTATED       24     18     11     34     16
  DEL PEAK 10(6P25.3) WILD-TYPE     63     42     30     98     58
D47V10, multiclass
        clus
vv       DEL PEAK 10(6P25.3) MUTATED DEL PEAK 10(6P25.3) WILD-TYPE
  CLUS_1                          24                            63
  CLUS_2                          18                            42
  CLUS_3                          11                            30
  CLUS_4                          34                            98
  CLUS_5                          16                            58
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = DEL PEAK 11(6Q21) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(6Q21) MUTATED       54     99     16     21      0
  DEL PEAK 11(6Q21) WILD-TYPE     24     47    105     40      2
D48V1, multiclass
        clus
vv       DEL PEAK 11(6Q21) MUTATED DEL PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        54                          24
  CLUS_2                        99                          47
  CLUS_3                        16                         105
  CLUS_4                        21                          40
  CLUS_5                         0                           2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(6Q21) MUTATED       56     67     28     39
  DEL PEAK 11(6Q21) WILD-TYPE     82     60     35     41
D48V2, multiclass
        clus
vv       DEL PEAK 11(6Q21) MUTATED DEL PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        56                          82
  CLUS_2                        67                          60
  CLUS_3                        28                          35
  CLUS_4                        39                          41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q21) MUTATED       55     44     54
  DEL PEAK 11(6Q21) WILD-TYPE     67     70     50
D48V3, multiclass
        clus
vv       DEL PEAK 11(6Q21) MUTATED DEL PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        55                          67
  CLUS_2                        44                          70
  CLUS_3                        54                          50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(6Q21) MUTATED       45     51     46     11
  DEL PEAK 11(6Q21) WILD-TYPE     45     70     52     20
D48V4, multiclass
        clus
vv       DEL PEAK 11(6Q21) MUTATED DEL PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        45                          45
  CLUS_2                        51                          70
  CLUS_3                        46                          52
  CLUS_4                        11                          20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(6Q21) MUTATED       37     64     16     46     26
  DEL PEAK 11(6Q21) WILD-TYPE     35     71     22     57     30
D48V5, multiclass
        clus
vv       DEL PEAK 11(6Q21) MUTATED DEL PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        37                          35
  CLUS_2                        64                          71
  CLUS_3                        16                          22
  CLUS_4                        46                          57
  CLUS_5                        26                          30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q21) MUTATED       63     49     77
  DEL PEAK 11(6Q21) WILD-TYPE     55     63     97
D48V6, multiclass
        clus
vv       DEL PEAK 11(6Q21) MUTATED DEL PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        63                          55
  CLUS_2                        49                          63
  CLUS_3                        77                          97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(6Q21) MUTATED       42     48     44     10     45
  DEL PEAK 11(6Q21) WILD-TYPE     63     26     70     15     42
D48V7, multiclass
        clus
vv       DEL PEAK 11(6Q21) MUTATED DEL PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        42                          63
  CLUS_2                        48                          26
  CLUS_3                        44                          70
  CLUS_4                        10                          15
  CLUS_5                        45                          42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q21) MUTATED      112     50     27
  DEL PEAK 11(6Q21) WILD-TYPE    154     33     29
D48V8, multiclass
        clus
vv       DEL PEAK 11(6Q21) MUTATED DEL PEAK 11(6Q21) WILD-TYPE
  CLUS_1                       112                         154
  CLUS_2                        50                          33
  CLUS_3                        27                          29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(6Q21) MUTATED       61     30     57     39
  DEL PEAK 11(6Q21) WILD-TYPE     63     21     70     53
D48V9, multiclass
        clus
vv       DEL PEAK 11(6Q21) MUTATED DEL PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        61                          63
  CLUS_2                        30                          21
  CLUS_3                        57                          70
  CLUS_4                        39                          53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(6Q21) MUTATED       36     37     27     58     29
  DEL PEAK 11(6Q21) WILD-TYPE     51     23     14     74     45
D48V10, multiclass
        clus
vv       DEL PEAK 11(6Q21) MUTATED DEL PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        36                          51
  CLUS_2                        37                          23
  CLUS_3                        27                          14
  CLUS_4                        58                          74
  CLUS_5                        29                          45
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = DEL PEAK 12(6Q27) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(6Q27) MUTATED       55    100     14     21      0
  DEL PEAK 12(6Q27) WILD-TYPE     23     46    107     40      2
D49V1, multiclass
        clus
vv       DEL PEAK 12(6Q27) MUTATED DEL PEAK 12(6Q27) WILD-TYPE
  CLUS_1                        55                          23
  CLUS_2                       100                          46
  CLUS_3                        14                         107
  CLUS_4                        21                          40
  CLUS_5                         0                           2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(6Q27) MUTATED       54     71     29     36
  DEL PEAK 12(6Q27) WILD-TYPE     84     56     34     44
D49V2, multiclass
        clus
vv       DEL PEAK 12(6Q27) MUTATED DEL PEAK 12(6Q27) WILD-TYPE
  CLUS_1                        54                          84
  CLUS_2                        71                          56
  CLUS_3                        29                          34
  CLUS_4                        36                          44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6Q27) MUTATED       53     46     54
  DEL PEAK 12(6Q27) WILD-TYPE     69     68     50
D49V3, multiclass
        clus
vv       DEL PEAK 12(6Q27) MUTATED DEL PEAK 12(6Q27) WILD-TYPE
  CLUS_1                        53                          69
  CLUS_2                        46                          68
  CLUS_3                        54                          50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(6Q27) MUTATED       47     49     48      9
  DEL PEAK 12(6Q27) WILD-TYPE     43     72     50     22
D49V4, multiclass
        clus
vv       DEL PEAK 12(6Q27) MUTATED DEL PEAK 12(6Q27) WILD-TYPE
  CLUS_1                        47                          43
  CLUS_2                        49                          72
  CLUS_3                        48                          50
  CLUS_4                         9                          22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(6Q27) MUTATED       36     65     14     49     25
  DEL PEAK 12(6Q27) WILD-TYPE     36     70     24     54     31
D49V5, multiclass
        clus
vv       DEL PEAK 12(6Q27) MUTATED DEL PEAK 12(6Q27) WILD-TYPE
  CLUS_1                        36                          36
  CLUS_2                        65                          70
  CLUS_3                        14                          24
  CLUS_4                        49                          54
  CLUS_5                        25                          31
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6Q27) MUTATED       69     47     73
  DEL PEAK 12(6Q27) WILD-TYPE     49     65    101
D49V6, multiclass
        clus
vv       DEL PEAK 12(6Q27) MUTATED DEL PEAK 12(6Q27) WILD-TYPE
  CLUS_1                        69                          49
  CLUS_2                        47                          65
  CLUS_3                        73                         101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(6Q27) MUTATED       39     46     48     12     44
  DEL PEAK 12(6Q27) WILD-TYPE     66     28     66     13     43
D49V7, multiclass
        clus
vv       DEL PEAK 12(6Q27) MUTATED DEL PEAK 12(6Q27) WILD-TYPE
  CLUS_1                        39                          66
  CLUS_2                        46                          28
  CLUS_3                        48                          66
  CLUS_4                        12                          13
  CLUS_5                        44                          43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6Q27) MUTATED      111     50     28
  DEL PEAK 12(6Q27) WILD-TYPE    155     33     28
D49V8, multiclass
        clus
vv       DEL PEAK 12(6Q27) MUTATED DEL PEAK 12(6Q27) WILD-TYPE
  CLUS_1                       111                         155
  CLUS_2                        50                          33
  CLUS_3                        28                          28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(6Q27) MUTATED       64     28     58     37
  DEL PEAK 12(6Q27) WILD-TYPE     60     23     69     55
D49V9, multiclass
        clus
vv       DEL PEAK 12(6Q27) MUTATED DEL PEAK 12(6Q27) WILD-TYPE
  CLUS_1                        64                          60
  CLUS_2                        28                          23
  CLUS_3                        58                          69
  CLUS_4                        37                          55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(6Q27) MUTATED       37     37     28     56     29
  DEL PEAK 12(6Q27) WILD-TYPE     50     23     13     76     45
D49V10, multiclass
        clus
vv       DEL PEAK 12(6Q27) MUTATED DEL PEAK 12(6Q27) WILD-TYPE
  CLUS_1                        37                          50
  CLUS_2                        37                          23
  CLUS_3                        28                          13
  CLUS_4                        56                          76
  CLUS_5                        29                          45
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = DEL PEAK 13(7Q36.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(7Q36.3) MUTATED       10     28      6     16      0
  DEL PEAK 13(7Q36.3) WILD-TYPE     68    118    115     45      2
D50V1, multiclass
        clus
vv       DEL PEAK 13(7Q36.3) MUTATED DEL PEAK 13(7Q36.3) WILD-TYPE
  CLUS_1                          10                            68
  CLUS_2                          28                           118
  CLUS_3                           6                           115
  CLUS_4                          16                            45
  CLUS_5                           0                             2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(7Q36.3) MUTATED       19     21      6     14
  DEL PEAK 13(7Q36.3) WILD-TYPE    119    106     57     66
D50V2, multiclass
        clus
vv       DEL PEAK 13(7Q36.3) MUTATED DEL PEAK 13(7Q36.3) WILD-TYPE
  CLUS_1                          19                           119
  CLUS_2                          21                           106
  CLUS_3                           6                            57
  CLUS_4                          14                            66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(7Q36.3) MUTATED       14     13     21
  DEL PEAK 13(7Q36.3) WILD-TYPE    108    101     83
D50V3, multiclass
        clus
vv       DEL PEAK 13(7Q36.3) MUTATED DEL PEAK 13(7Q36.3) WILD-TYPE
  CLUS_1                          14                           108
  CLUS_2                          13                           101
  CLUS_3                          21                            83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(7Q36.3) MUTATED       10     12     20      6
  DEL PEAK 13(7Q36.3) WILD-TYPE     80    109     78     25
D50V4, multiclass
        clus
vv       DEL PEAK 13(7Q36.3) MUTATED DEL PEAK 13(7Q36.3) WILD-TYPE
  CLUS_1                          10                            80
  CLUS_2                          12                           109
  CLUS_3                          20                            78
  CLUS_4                           6                            25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(7Q36.3) MUTATED        7     15      3     23     12
  DEL PEAK 13(7Q36.3) WILD-TYPE     65    120     35     80     44
D50V5, multiclass
        clus
vv       DEL PEAK 13(7Q36.3) MUTATED DEL PEAK 13(7Q36.3) WILD-TYPE
  CLUS_1                           7                            65
  CLUS_2                          15                           120
  CLUS_3                           3                            35
  CLUS_4                          23                            80
  CLUS_5                          12                            44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(7Q36.3) MUTATED       18     13     29
  DEL PEAK 13(7Q36.3) WILD-TYPE    100     99    145
D50V6, multiclass
        clus
vv       DEL PEAK 13(7Q36.3) MUTATED DEL PEAK 13(7Q36.3) WILD-TYPE
  CLUS_1                          18                           100
  CLUS_2                          13                            99
  CLUS_3                          29                           145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(7Q36.3) MUTATED       19     13     15      4      9
  DEL PEAK 13(7Q36.3) WILD-TYPE     86     61     99     21     78
D50V7, multiclass
        clus
vv       DEL PEAK 13(7Q36.3) MUTATED DEL PEAK 13(7Q36.3) WILD-TYPE
  CLUS_1                          19                            86
  CLUS_2                          13                            61
  CLUS_3                          15                            99
  CLUS_4                           4                            21
  CLUS_5                           9                            78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(7Q36.3) MUTATED       41     16      3
  DEL PEAK 13(7Q36.3) WILD-TYPE    225     67     53
D50V8, multiclass
        clus
vv       DEL PEAK 13(7Q36.3) MUTATED DEL PEAK 13(7Q36.3) WILD-TYPE
  CLUS_1                          41                           225
  CLUS_2                          16                            67
  CLUS_3                           3                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(7Q36.3) MUTATED       11      6     21     22
  DEL PEAK 13(7Q36.3) WILD-TYPE    113     45    106     70
D50V9, multiclass
        clus
vv       DEL PEAK 13(7Q36.3) MUTATED DEL PEAK 13(7Q36.3) WILD-TYPE
  CLUS_1                          11                           113
  CLUS_2                           6                            45
  CLUS_3                          21                           106
  CLUS_4                          22                            70
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(7Q36.3) MUTATED        5     10      5     24     16
  DEL PEAK 13(7Q36.3) WILD-TYPE     82     50     36    108     58
D50V10, multiclass
        clus
vv       DEL PEAK 13(7Q36.3) MUTATED DEL PEAK 13(7Q36.3) WILD-TYPE
  CLUS_1                           5                            82
  CLUS_2                          10                            50
  CLUS_3                           5                            36
  CLUS_4                          24                           108
  CLUS_5                          16                            58
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = DEL PEAK 14(8P23.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(8P23.3) MUTATED       30    130     34     48      1
  DEL PEAK 14(8P23.3) WILD-TYPE     48     16     87     13      1
D51V1, multiclass
        clus
vv       DEL PEAK 14(8P23.3) MUTATED DEL PEAK 14(8P23.3) WILD-TYPE
  CLUS_1                          30                            48
  CLUS_2                         130                            16
  CLUS_3                          34                            87
  CLUS_4                          48                            13
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(8P23.3) MUTATED       89     93     22     39
  DEL PEAK 14(8P23.3) WILD-TYPE     49     34     41     41
D51V2, multiclass
        clus
vv       DEL PEAK 14(8P23.3) MUTATED DEL PEAK 14(8P23.3) WILD-TYPE
  CLUS_1                          89                            49
  CLUS_2                          93                            34
  CLUS_3                          22                            41
  CLUS_4                          39                            41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(8P23.3) MUTATED       77     58     64
  DEL PEAK 14(8P23.3) WILD-TYPE     45     56     40
D51V3, multiclass
        clus
vv       DEL PEAK 14(8P23.3) MUTATED DEL PEAK 14(8P23.3) WILD-TYPE
  CLUS_1                          77                            45
  CLUS_2                          58                            56
  CLUS_3                          64                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(8P23.3) MUTATED       57     56     66     20
  DEL PEAK 14(8P23.3) WILD-TYPE     33     65     32     11
D51V4, multiclass
        clus
vv       DEL PEAK 14(8P23.3) MUTATED DEL PEAK 14(8P23.3) WILD-TYPE
  CLUS_1                          57                            33
  CLUS_2                          56                            65
  CLUS_3                          66                            32
  CLUS_4                          20                            11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(8P23.3) MUTATED       46     74     11     70     41
  DEL PEAK 14(8P23.3) WILD-TYPE     26     61     27     33     15
D51V5, multiclass
        clus
vv       DEL PEAK 14(8P23.3) MUTATED DEL PEAK 14(8P23.3) WILD-TYPE
  CLUS_1                          46                            26
  CLUS_2                          74                            61
  CLUS_3                          11                            27
  CLUS_4                          70                            33
  CLUS_5                          41                            15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(8P23.3) MUTATED       85     51    106
  DEL PEAK 14(8P23.3) WILD-TYPE     33     61     68
D51V6, multiclass
        clus
vv       DEL PEAK 14(8P23.3) MUTATED DEL PEAK 14(8P23.3) WILD-TYPE
  CLUS_1                          85                            33
  CLUS_2                          51                            61
  CLUS_3                         106                            68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(8P23.3) MUTATED       61     50     59     17     54
  DEL PEAK 14(8P23.3) WILD-TYPE     44     24     55      8     33
D51V7, multiclass
        clus
vv       DEL PEAK 14(8P23.3) MUTATED DEL PEAK 14(8P23.3) WILD-TYPE
  CLUS_1                          61                            44
  CLUS_2                          50                            24
  CLUS_3                          59                            55
  CLUS_4                          17                             8
  CLUS_5                          54                            33
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(8P23.3) MUTATED      144     58     39
  DEL PEAK 14(8P23.3) WILD-TYPE    122     25     17
D51V8, multiclass
        clus
vv       DEL PEAK 14(8P23.3) MUTATED DEL PEAK 14(8P23.3) WILD-TYPE
  CLUS_1                         144                           122
  CLUS_2                          58                            25
  CLUS_3                          39                            17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(8P23.3) MUTATED       77     32     66     61
  DEL PEAK 14(8P23.3) WILD-TYPE     47     19     61     31
D51V9, multiclass
        clus
vv       DEL PEAK 14(8P23.3) MUTATED DEL PEAK 14(8P23.3) WILD-TYPE
  CLUS_1                          77                            47
  CLUS_2                          32                            19
  CLUS_3                          66                            61
  CLUS_4                          61                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(8P23.3) MUTATED       49     42     27     71     47
  DEL PEAK 14(8P23.3) WILD-TYPE     38     18     14     61     27
D51V10, multiclass
        clus
vv       DEL PEAK 14(8P23.3) MUTATED DEL PEAK 14(8P23.3) WILD-TYPE
  CLUS_1                          49                            38
  CLUS_2                          42                            18
  CLUS_3                          27                            14
  CLUS_4                          71                            61
  CLUS_5                          47                            27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = DEL PEAK 15(8P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(8P21.3) MUTATED       33    135     34     49      1
  DEL PEAK 15(8P21.3) WILD-TYPE     45     11     87     12      1
D52V1, multiclass
        clus
vv       DEL PEAK 15(8P21.3) MUTATED DEL PEAK 15(8P21.3) WILD-TYPE
  CLUS_1                          33                            45
  CLUS_2                         135                            11
  CLUS_3                          34                            87
  CLUS_4                          49                            12
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(8P21.3) MUTATED       90     95     25     42
  DEL PEAK 15(8P21.3) WILD-TYPE     48     32     38     38
D52V2, multiclass
        clus
vv       DEL PEAK 15(8P21.3) MUTATED DEL PEAK 15(8P21.3) WILD-TYPE
  CLUS_1                          90                            48
  CLUS_2                          95                            32
  CLUS_3                          25                            38
  CLUS_4                          42                            38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(8P21.3) MUTATED       82     62     66
  DEL PEAK 15(8P21.3) WILD-TYPE     40     52     38
D52V3, multiclass
        clus
vv       DEL PEAK 15(8P21.3) MUTATED DEL PEAK 15(8P21.3) WILD-TYPE
  CLUS_1                          82                            40
  CLUS_2                          62                            52
  CLUS_3                          66                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(8P21.3) MUTATED       60     62     67     21
  DEL PEAK 15(8P21.3) WILD-TYPE     30     59     31     10
D52V4, multiclass
        clus
vv       DEL PEAK 15(8P21.3) MUTATED DEL PEAK 15(8P21.3) WILD-TYPE
  CLUS_1                          60                            30
  CLUS_2                          62                            59
  CLUS_3                          67                            31
  CLUS_4                          21                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(8P21.3) MUTATED       46     80     13     76     36
  DEL PEAK 15(8P21.3) WILD-TYPE     26     55     25     27     20
D52V5, multiclass
        clus
vv       DEL PEAK 15(8P21.3) MUTATED DEL PEAK 15(8P21.3) WILD-TYPE
  CLUS_1                          46                            26
  CLUS_2                          80                            55
  CLUS_3                          13                            25
  CLUS_4                          76                            27
  CLUS_5                          36                            20
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(8P21.3) MUTATED       83     57    111
  DEL PEAK 15(8P21.3) WILD-TYPE     35     55     63
D52V6, multiclass
        clus
vv       DEL PEAK 15(8P21.3) MUTATED DEL PEAK 15(8P21.3) WILD-TYPE
  CLUS_1                          83                            35
  CLUS_2                          57                            55
  CLUS_3                         111                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(8P21.3) MUTATED       63     56     63     16     52
  DEL PEAK 15(8P21.3) WILD-TYPE     42     18     51      9     35
D52V7, multiclass
        clus
vv       DEL PEAK 15(8P21.3) MUTATED DEL PEAK 15(8P21.3) WILD-TYPE
  CLUS_1                          63                            42
  CLUS_2                          56                            18
  CLUS_3                          63                            51
  CLUS_4                          16                             9
  CLUS_5                          52                            35
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(8P21.3) MUTATED      150     63     37
  DEL PEAK 15(8P21.3) WILD-TYPE    116     20     19
D52V8, multiclass
        clus
vv       DEL PEAK 15(8P21.3) MUTATED DEL PEAK 15(8P21.3) WILD-TYPE
  CLUS_1                         150                           116
  CLUS_2                          63                            20
  CLUS_3                          37                            19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(8P21.3) MUTATED       75     36     69     65
  DEL PEAK 15(8P21.3) WILD-TYPE     49     15     58     27
D52V9, multiclass
        clus
vv       DEL PEAK 15(8P21.3) MUTATED DEL PEAK 15(8P21.3) WILD-TYPE
  CLUS_1                          75                            49
  CLUS_2                          36                            15
  CLUS_3                          69                            58
  CLUS_4                          65                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(8P21.3) MUTATED       47     46     27     76     49
  DEL PEAK 15(8P21.3) WILD-TYPE     40     14     14     56     25
D52V10, multiclass
        clus
vv       DEL PEAK 15(8P21.3) MUTATED DEL PEAK 15(8P21.3) WILD-TYPE
  CLUS_1                          47                            40
  CLUS_2                          46                            14
  CLUS_3                          27                            14
  CLUS_4                          76                            56
  CLUS_5                          49                            25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = DEL PEAK 16(9P23) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(9P23) MUTATED       32     89     52      3      1
  DEL PEAK 16(9P23) WILD-TYPE     46     57     69     58      1
D53V1, multiclass
        clus
vv       DEL PEAK 16(9P23) MUTATED DEL PEAK 16(9P23) WILD-TYPE
  CLUS_1                        32                          46
  CLUS_2                        89                          57
  CLUS_3                        52                          69
  CLUS_4                         3                          58
  CLUS_5                         1                           1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(9P23) MUTATED       41     65     31     40
  DEL PEAK 16(9P23) WILD-TYPE     97     62     32     40
D53V2, multiclass
        clus
vv       DEL PEAK 16(9P23) MUTATED DEL PEAK 16(9P23) WILD-TYPE
  CLUS_1                        41                          97
  CLUS_2                        65                          62
  CLUS_3                        31                          32
  CLUS_4                        40                          40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(9P23) MUTATED       44     61     42
  DEL PEAK 16(9P23) WILD-TYPE     78     53     62
D53V3, multiclass
        clus
vv       DEL PEAK 16(9P23) MUTATED DEL PEAK 16(9P23) WILD-TYPE
  CLUS_1                        44                          78
  CLUS_2                        61                          53
  CLUS_3                        42                          62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(9P23) MUTATED       39     66     30     12
  DEL PEAK 16(9P23) WILD-TYPE     51     55     68     19
D53V4, multiclass
        clus
vv       DEL PEAK 16(9P23) MUTATED DEL PEAK 16(9P23) WILD-TYPE
  CLUS_1                        39                          51
  CLUS_2                        66                          55
  CLUS_3                        30                          68
  CLUS_4                        12                          19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(9P23) MUTATED       31     66     26     30     24
  DEL PEAK 16(9P23) WILD-TYPE     41     69     12     73     32
D53V5, multiclass
        clus
vv       DEL PEAK 16(9P23) MUTATED DEL PEAK 16(9P23) WILD-TYPE
  CLUS_1                        31                          41
  CLUS_2                        66                          69
  CLUS_3                        26                          12
  CLUS_4                        30                          73
  CLUS_5                        24                          32
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(9P23) MUTATED       61     60     56
  DEL PEAK 16(9P23) WILD-TYPE     57     52    118
D53V6, multiclass
        clus
vv       DEL PEAK 16(9P23) MUTATED DEL PEAK 16(9P23) WILD-TYPE
  CLUS_1                        61                          57
  CLUS_2                        60                          52
  CLUS_3                        56                         118
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(9P23) MUTATED       29     39     57     12     39
  DEL PEAK 16(9P23) WILD-TYPE     76     35     57     13     48
D53V7, multiclass
        clus
vv       DEL PEAK 16(9P23) MUTATED DEL PEAK 16(9P23) WILD-TYPE
  CLUS_1                        29                          76
  CLUS_2                        39                          35
  CLUS_3                        57                          57
  CLUS_4                        12                          13
  CLUS_5                        39                          48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(9P23) MUTATED      108     45     23
  DEL PEAK 16(9P23) WILD-TYPE    158     38     33
D53V8, multiclass
        clus
vv       DEL PEAK 16(9P23) MUTATED DEL PEAK 16(9P23) WILD-TYPE
  CLUS_1                       108                         158
  CLUS_2                        45                          38
  CLUS_3                        23                          33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(9P23) MUTATED       57     28     66     21
  DEL PEAK 16(9P23) WILD-TYPE     67     23     61     71
D53V9, multiclass
        clus
vv       DEL PEAK 16(9P23) MUTATED DEL PEAK 16(9P23) WILD-TYPE
  CLUS_1                        57                          67
  CLUS_2                        28                          23
  CLUS_3                        66                          61
  CLUS_4                        21                          71
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(9P23) MUTATED       35     33     22     63     19
  DEL PEAK 16(9P23) WILD-TYPE     52     27     19     69     55
D53V10, multiclass
        clus
vv       DEL PEAK 16(9P23) MUTATED DEL PEAK 16(9P23) WILD-TYPE
  CLUS_1                        35                          52
  CLUS_2                        33                          27
  CLUS_3                        22                          19
  CLUS_4                        63                          69
  CLUS_5                        19                          55
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = DEL PEAK 17(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(9P21.3) MUTATED       47    105     77      9      1
  DEL PEAK 17(9P21.3) WILD-TYPE     31     41     44     52      1
D54V1, multiclass
        clus
vv       DEL PEAK 17(9P21.3) MUTATED DEL PEAK 17(9P21.3) WILD-TYPE
  CLUS_1                          47                            31
  CLUS_2                         105                            41
  CLUS_3                          77                            44
  CLUS_4                           9                            52
  CLUS_5                           1                             1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(9P21.3) MUTATED       72     78     36     53
  DEL PEAK 17(9P21.3) WILD-TYPE     66     49     27     27
D54V2, multiclass
        clus
vv       DEL PEAK 17(9P21.3) MUTATED DEL PEAK 17(9P21.3) WILD-TYPE
  CLUS_1                          72                            66
  CLUS_2                          78                            49
  CLUS_3                          36                            27
  CLUS_4                          53                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(9P21.3) MUTATED       64     77     59
  DEL PEAK 17(9P21.3) WILD-TYPE     58     37     45
D54V3, multiclass
        clus
vv       DEL PEAK 17(9P21.3) MUTATED DEL PEAK 17(9P21.3) WILD-TYPE
  CLUS_1                          64                            58
  CLUS_2                          77                            37
  CLUS_3                          59                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(9P21.3) MUTATED       48     83     47     22
  DEL PEAK 17(9P21.3) WILD-TYPE     42     38     51      9
D54V4, multiclass
        clus
vv       DEL PEAK 17(9P21.3) MUTATED DEL PEAK 17(9P21.3) WILD-TYPE
  CLUS_1                          48                            42
  CLUS_2                          83                            38
  CLUS_3                          47                            51
  CLUS_4                          22                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(9P21.3) MUTATED       36     85     33     51     33
  DEL PEAK 17(9P21.3) WILD-TYPE     36     50      5     52     23
D54V5, multiclass
        clus
vv       DEL PEAK 17(9P21.3) MUTATED DEL PEAK 17(9P21.3) WILD-TYPE
  CLUS_1                          36                            36
  CLUS_2                          85                            50
  CLUS_3                          33                             5
  CLUS_4                          51                            52
  CLUS_5                          33                            23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(9P21.3) MUTATED       75     74     89
  DEL PEAK 17(9P21.3) WILD-TYPE     43     38     85
D54V6, multiclass
        clus
vv       DEL PEAK 17(9P21.3) MUTATED DEL PEAK 17(9P21.3) WILD-TYPE
  CLUS_1                          75                            43
  CLUS_2                          74                            38
  CLUS_3                          89                            85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(9P21.3) MUTATED       56     48     73     14     45
  DEL PEAK 17(9P21.3) WILD-TYPE     49     26     41     11     42
D54V7, multiclass
        clus
vv       DEL PEAK 17(9P21.3) MUTATED DEL PEAK 17(9P21.3) WILD-TYPE
  CLUS_1                          56                            49
  CLUS_2                          48                            26
  CLUS_3                          73                            41
  CLUS_4                          14                            11
  CLUS_5                          45                            42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(9P21.3) MUTATED      156     54     26
  DEL PEAK 17(9P21.3) WILD-TYPE    110     29     30
D54V8, multiclass
        clus
vv       DEL PEAK 17(9P21.3) MUTATED DEL PEAK 17(9P21.3) WILD-TYPE
  CLUS_1                         156                           110
  CLUS_2                          54                            29
  CLUS_3                          26                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(9P21.3) MUTATED       74     35     83     40
  DEL PEAK 17(9P21.3) WILD-TYPE     50     16     44     52
D54V9, multiclass
        clus
vv       DEL PEAK 17(9P21.3) MUTATED DEL PEAK 17(9P21.3) WILD-TYPE
  CLUS_1                          74                            50
  CLUS_2                          35                            16
  CLUS_3                          83                            44
  CLUS_4                          40                            52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(9P21.3) MUTATED       44     41     31     80     36
  DEL PEAK 17(9P21.3) WILD-TYPE     43     19     10     52     38
D54V10, multiclass
        clus
vv       DEL PEAK 17(9P21.3) MUTATED DEL PEAK 17(9P21.3) WILD-TYPE
  CLUS_1                          44                            43
  CLUS_2                          41                            19
  CLUS_3                          31                            10
  CLUS_4                          80                            52
  CLUS_5                          36                            38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = DEL PEAK 18(9Q22.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(9Q22.33) MUTATED       39     77     53      9      0
  DEL PEAK 18(9Q22.33) WILD-TYPE     39     69     68     52      2
D55V1, multiclass
        clus
vv       DEL PEAK 18(9Q22.33) MUTATED DEL PEAK 18(9Q22.33) WILD-TYPE
  CLUS_1                           39                             39
  CLUS_2                           77                             69
  CLUS_3                           53                             68
  CLUS_4                            9                             52
  CLUS_5                            0                              2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(9Q22.33) MUTATED       36     67     33     42
  DEL PEAK 18(9Q22.33) WILD-TYPE    102     60     30     38
D55V2, multiclass
        clus
vv       DEL PEAK 18(9Q22.33) MUTATED DEL PEAK 18(9Q22.33) WILD-TYPE
  CLUS_1                           36                            102
  CLUS_2                           67                             60
  CLUS_3                           33                             30
  CLUS_4                           42                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(9Q22.33) MUTATED       44     66     35
  DEL PEAK 18(9Q22.33) WILD-TYPE     78     48     69
D55V3, multiclass
        clus
vv       DEL PEAK 18(9Q22.33) MUTATED DEL PEAK 18(9Q22.33) WILD-TYPE
  CLUS_1                           44                             78
  CLUS_2                           66                             48
  CLUS_3                           35                             69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(9Q22.33) MUTATED       40     76     21      8
  DEL PEAK 18(9Q22.33) WILD-TYPE     50     45     77     23
D55V4, multiclass
        clus
vv       DEL PEAK 18(9Q22.33) MUTATED DEL PEAK 18(9Q22.33) WILD-TYPE
  CLUS_1                           40                             50
  CLUS_2                           76                             45
  CLUS_3                           21                             77
  CLUS_4                            8                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(9Q22.33) MUTATED       30     75     26     21     26
  DEL PEAK 18(9Q22.33) WILD-TYPE     42     60     12     82     30
D55V5, multiclass
        clus
vv       DEL PEAK 18(9Q22.33) MUTATED DEL PEAK 18(9Q22.33) WILD-TYPE
  CLUS_1                           30                             42
  CLUS_2                           75                             60
  CLUS_3                           26                             12
  CLUS_4                           21                             82
  CLUS_5                           26                             30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(9Q22.33) MUTATED       64     68     46
  DEL PEAK 18(9Q22.33) WILD-TYPE     54     44    128
D55V6, multiclass
        clus
vv       DEL PEAK 18(9Q22.33) MUTATED DEL PEAK 18(9Q22.33) WILD-TYPE
  CLUS_1                           64                             54
  CLUS_2                           68                             44
  CLUS_3                           46                            128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(9Q22.33) MUTATED       25     35     70     11     36
  DEL PEAK 18(9Q22.33) WILD-TYPE     80     39     44     14     51
D55V7, multiclass
        clus
vv       DEL PEAK 18(9Q22.33) MUTATED DEL PEAK 18(9Q22.33) WILD-TYPE
  CLUS_1                           25                             80
  CLUS_2                           35                             39
  CLUS_3                           70                             44
  CLUS_4                           11                             14
  CLUS_5                           36                             51
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(9Q22.33) MUTATED      110     42     25
  DEL PEAK 18(9Q22.33) WILD-TYPE    156     41     31
D55V8, multiclass
        clus
vv       DEL PEAK 18(9Q22.33) MUTATED DEL PEAK 18(9Q22.33) WILD-TYPE
  CLUS_1                          110                            156
  CLUS_2                           42                             41
  CLUS_3                           25                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(9Q22.33) MUTATED       52     29     77     15
  DEL PEAK 18(9Q22.33) WILD-TYPE     72     22     50     77
D55V9, multiclass
        clus
vv       DEL PEAK 18(9Q22.33) MUTATED DEL PEAK 18(9Q22.33) WILD-TYPE
  CLUS_1                           52                             72
  CLUS_2                           29                             22
  CLUS_3                           77                             50
  CLUS_4                           15                             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(9Q22.33) MUTATED       34     34     20     73     12
  DEL PEAK 18(9Q22.33) WILD-TYPE     53     26     21     59     62
D55V10, multiclass
        clus
vv       DEL PEAK 18(9Q22.33) MUTATED DEL PEAK 18(9Q22.33) WILD-TYPE
  CLUS_1                           34                             53
  CLUS_2                           34                             26
  CLUS_3                           20                             21
  CLUS_4                           73                             59
  CLUS_5                           12                             62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = DEL PEAK 19(10P11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(10P11.21) MUTATED       15     33     11     14      1
  DEL PEAK 19(10P11.21) WILD-TYPE     63    113    110     47      1
D56V1, multiclass
        clus
vv       DEL PEAK 19(10P11.21) MUTATED DEL PEAK 19(10P11.21) WILD-TYPE
  CLUS_1                            15                              63
  CLUS_2                            33                             113
  CLUS_3                            11                             110
  CLUS_4                            14                              47
  CLUS_5                             1                               1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(10P11.21) MUTATED       26     22     10     16
  DEL PEAK 19(10P11.21) WILD-TYPE    112    105     53     64
D56V2, multiclass
        clus
vv       DEL PEAK 19(10P11.21) MUTATED DEL PEAK 19(10P11.21) WILD-TYPE
  CLUS_1                            26                             112
  CLUS_2                            22                             105
  CLUS_3                            10                              53
  CLUS_4                            16                              64
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(10P11.21) MUTATED       28     15     18
  DEL PEAK 19(10P11.21) WILD-TYPE     94     99     86
D56V3, multiclass
        clus
vv       DEL PEAK 19(10P11.21) MUTATED DEL PEAK 19(10P11.21) WILD-TYPE
  CLUS_1                            28                              94
  CLUS_2                            15                              99
  CLUS_3                            18                              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(10P11.21) MUTATED       18     17     19      7
  DEL PEAK 19(10P11.21) WILD-TYPE     72    104     79     24
D56V4, multiclass
        clus
vv       DEL PEAK 19(10P11.21) MUTATED DEL PEAK 19(10P11.21) WILD-TYPE
  CLUS_1                            18                              72
  CLUS_2                            17                             104
  CLUS_3                            19                              79
  CLUS_4                             7                              24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(10P11.21) MUTATED        7     18     10     25     12
  DEL PEAK 19(10P11.21) WILD-TYPE     65    117     28     78     44
D56V5, multiclass
        clus
vv       DEL PEAK 19(10P11.21) MUTATED DEL PEAK 19(10P11.21) WILD-TYPE
  CLUS_1                             7                              65
  CLUS_2                            18                             117
  CLUS_3                            10                              28
  CLUS_4                            25                              78
  CLUS_5                            12                              44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(10P11.21) MUTATED       14     19     39
  DEL PEAK 19(10P11.21) WILD-TYPE    104     93    135
D56V6, multiclass
        clus
vv       DEL PEAK 19(10P11.21) MUTATED DEL PEAK 19(10P11.21) WILD-TYPE
  CLUS_1                            14                             104
  CLUS_2                            19                              93
  CLUS_3                            39                             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(10P11.21) MUTATED       25     14     19      3     13
  DEL PEAK 19(10P11.21) WILD-TYPE     80     60     95     22     74
D56V7, multiclass
        clus
vv       DEL PEAK 19(10P11.21) MUTATED DEL PEAK 19(10P11.21) WILD-TYPE
  CLUS_1                            25                              80
  CLUS_2                            14                              60
  CLUS_3                            19                              95
  CLUS_4                             3                              22
  CLUS_5                            13                              74
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(10P11.21) MUTATED       51     16      7
  DEL PEAK 19(10P11.21) WILD-TYPE    215     67     49
D56V8, multiclass
        clus
vv       DEL PEAK 19(10P11.21) MUTATED DEL PEAK 19(10P11.21) WILD-TYPE
  CLUS_1                            51                             215
  CLUS_2                            16                              67
  CLUS_3                             7                              49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(10P11.21) MUTATED       17      9     23     23
  DEL PEAK 19(10P11.21) WILD-TYPE    107     42    104     69
D56V9, multiclass
        clus
vv       DEL PEAK 19(10P11.21) MUTATED DEL PEAK 19(10P11.21) WILD-TYPE
  CLUS_1                            17                             107
  CLUS_2                             9                              42
  CLUS_3                            23                             104
  CLUS_4                            23                              69
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(10P11.21) MUTATED       12      9     10     20     21
  DEL PEAK 19(10P11.21) WILD-TYPE     75     51     31    112     53
D56V10, multiclass
        clus
vv       DEL PEAK 19(10P11.21) MUTATED DEL PEAK 19(10P11.21) WILD-TYPE
  CLUS_1                            12                              75
  CLUS_2                             9                              51
  CLUS_3                            10                              31
  CLUS_4                            20                             112
  CLUS_5                            21                              53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = DEL PEAK 20(10Q23.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(10Q23.31) MUTATED       46     71     18     33      0
  DEL PEAK 20(10Q23.31) WILD-TYPE     32     75    103     28      2
D57V1, multiclass
        clus
vv       DEL PEAK 20(10Q23.31) MUTATED DEL PEAK 20(10Q23.31) WILD-TYPE
  CLUS_1                            46                              32
  CLUS_2                            71                              75
  CLUS_3                            18                             103
  CLUS_4                            33                              28
  CLUS_5                             0                               2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(10Q23.31) MUTATED       48     66     23     31
  DEL PEAK 20(10Q23.31) WILD-TYPE     90     61     40     49
D57V2, multiclass
        clus
vv       DEL PEAK 20(10Q23.31) MUTATED DEL PEAK 20(10Q23.31) WILD-TYPE
  CLUS_1                            48                              90
  CLUS_2                            66                              61
  CLUS_3                            23                              40
  CLUS_4                            31                              49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(10Q23.31) MUTATED       58     40     40
  DEL PEAK 20(10Q23.31) WILD-TYPE     64     74     64
D57V3, multiclass
        clus
vv       DEL PEAK 20(10Q23.31) MUTATED DEL PEAK 20(10Q23.31) WILD-TYPE
  CLUS_1                            58                              64
  CLUS_2                            40                              74
  CLUS_3                            40                              64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(10Q23.31) MUTATED       47     43     37     11
  DEL PEAK 20(10Q23.31) WILD-TYPE     43     78     61     20
D57V4, multiclass
        clus
vv       DEL PEAK 20(10Q23.31) MUTATED DEL PEAK 20(10Q23.31) WILD-TYPE
  CLUS_1                            47                              43
  CLUS_2                            43                              78
  CLUS_3                            37                              61
  CLUS_4                            11                              20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(10Q23.31) MUTATED       23     53     16     43     30
  DEL PEAK 20(10Q23.31) WILD-TYPE     49     82     22     60     26
D57V5, multiclass
        clus
vv       DEL PEAK 20(10Q23.31) MUTATED DEL PEAK 20(10Q23.31) WILD-TYPE
  CLUS_1                            23                              49
  CLUS_2                            53                              82
  CLUS_3                            16                              22
  CLUS_4                            43                              60
  CLUS_5                            30                              26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(10Q23.31) MUTATED       53     44     68
  DEL PEAK 20(10Q23.31) WILD-TYPE     65     68    106
D57V6, multiclass
        clus
vv       DEL PEAK 20(10Q23.31) MUTATED DEL PEAK 20(10Q23.31) WILD-TYPE
  CLUS_1                            53                              65
  CLUS_2                            44                              68
  CLUS_3                            68                             106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(10Q23.31) MUTATED       41     31     48     13     34
  DEL PEAK 20(10Q23.31) WILD-TYPE     64     43     66     12     53
D57V7, multiclass
        clus
vv       DEL PEAK 20(10Q23.31) MUTATED DEL PEAK 20(10Q23.31) WILD-TYPE
  CLUS_1                            41                              64
  CLUS_2                            31                              43
  CLUS_3                            48                              66
  CLUS_4                            13                              12
  CLUS_5                            34                              53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(10Q23.31) MUTATED      106     39     22
  DEL PEAK 20(10Q23.31) WILD-TYPE    160     44     34
D57V8, multiclass
        clus
vv       DEL PEAK 20(10Q23.31) MUTATED DEL PEAK 20(10Q23.31) WILD-TYPE
  CLUS_1                           106                             160
  CLUS_2                            39                              44
  CLUS_3                            22                              34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(10Q23.31) MUTATED       50     22     60     31
  DEL PEAK 20(10Q23.31) WILD-TYPE     74     29     67     61
D57V9, multiclass
        clus
vv       DEL PEAK 20(10Q23.31) MUTATED DEL PEAK 20(10Q23.31) WILD-TYPE
  CLUS_1                            50                              74
  CLUS_2                            22                              29
  CLUS_3                            60                              67
  CLUS_4                            31                              61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(10Q23.31) MUTATED       32     27     17     59     28
  DEL PEAK 20(10Q23.31) WILD-TYPE     55     33     24     73     46
D57V10, multiclass
        clus
vv       DEL PEAK 20(10Q23.31) MUTATED DEL PEAK 20(10Q23.31) WILD-TYPE
  CLUS_1                            32                              55
  CLUS_2                            27                              33
  CLUS_3                            17                              24
  CLUS_4                            59                              73
  CLUS_5                            28                              46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = DEL PEAK 21(11P15.5) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(11P15.5) MUTATED       46    113     35     16      1
  DEL PEAK 21(11P15.5) WILD-TYPE     32     33     86     45      1
D58V1, multiclass
        clus
vv       DEL PEAK 21(11P15.5) MUTATED DEL PEAK 21(11P15.5) WILD-TYPE
  CLUS_1                           46                             32
  CLUS_2                          113                             33
  CLUS_3                           35                             86
  CLUS_4                           16                             45
  CLUS_5                            1                              1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(11P15.5) MUTATED       52     77     38     44
  DEL PEAK 21(11P15.5) WILD-TYPE     86     50     25     36
D58V2, multiclass
        clus
vv       DEL PEAK 21(11P15.5) MUTATED DEL PEAK 21(11P15.5) WILD-TYPE
  CLUS_1                           52                             86
  CLUS_2                           77                             50
  CLUS_3                           38                             25
  CLUS_4                           44                             36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(11P15.5) MUTATED       61     63     51
  DEL PEAK 21(11P15.5) WILD-TYPE     61     51     53
D58V3, multiclass
        clus
vv       DEL PEAK 21(11P15.5) MUTATED DEL PEAK 21(11P15.5) WILD-TYPE
  CLUS_1                           61                             61
  CLUS_2                           63                             51
  CLUS_3                           51                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(11P15.5) MUTATED       56     72     37     10
  DEL PEAK 21(11P15.5) WILD-TYPE     34     49     61     21
D58V4, multiclass
        clus
vv       DEL PEAK 21(11P15.5) MUTATED DEL PEAK 21(11P15.5) WILD-TYPE
  CLUS_1                           56                             34
  CLUS_2                           72                             49
  CLUS_3                           37                             61
  CLUS_4                           10                             21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(11P15.5) MUTATED       36     86     21     40     25
  DEL PEAK 21(11P15.5) WILD-TYPE     36     49     17     63     31
D58V5, multiclass
        clus
vv       DEL PEAK 21(11P15.5) MUTATED DEL PEAK 21(11P15.5) WILD-TYPE
  CLUS_1                           36                             36
  CLUS_2                           86                             49
  CLUS_3                           21                             17
  CLUS_4                           40                             63
  CLUS_5                           25                             31
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(11P15.5) MUTATED       76     66     66
  DEL PEAK 21(11P15.5) WILD-TYPE     42     46    108
D58V6, multiclass
        clus
vv       DEL PEAK 21(11P15.5) MUTATED DEL PEAK 21(11P15.5) WILD-TYPE
  CLUS_1                           76                             42
  CLUS_2                           66                             46
  CLUS_3                           66                            108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(11P15.5) MUTATED       35     48     69     13     45
  DEL PEAK 21(11P15.5) WILD-TYPE     70     26     45     12     42
D58V7, multiclass
        clus
vv       DEL PEAK 21(11P15.5) MUTATED DEL PEAK 21(11P15.5) WILD-TYPE
  CLUS_1                           35                             70
  CLUS_2                           48                             26
  CLUS_3                           69                             45
  CLUS_4                           13                             12
  CLUS_5                           45                             42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(11P15.5) MUTATED      126     54     30
  DEL PEAK 21(11P15.5) WILD-TYPE    140     29     26
D58V8, multiclass
        clus
vv       DEL PEAK 21(11P15.5) MUTATED DEL PEAK 21(11P15.5) WILD-TYPE
  CLUS_1                          126                            140
  CLUS_2                           54                             29
  CLUS_3                           30                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(11P15.5) MUTATED       72     31     71     31
  DEL PEAK 21(11P15.5) WILD-TYPE     52     20     56     61
D58V9, multiclass
        clus
vv       DEL PEAK 21(11P15.5) MUTATED DEL PEAK 21(11P15.5) WILD-TYPE
  CLUS_1                           72                             52
  CLUS_2                           31                             20
  CLUS_3                           71                             56
  CLUS_4                           31                             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(11P15.5) MUTATED       45     41     24     70     25
  DEL PEAK 21(11P15.5) WILD-TYPE     42     19     17     62     49
D58V10, multiclass
        clus
vv       DEL PEAK 21(11P15.5) MUTATED DEL PEAK 21(11P15.5) WILD-TYPE
  CLUS_1                           45                             42
  CLUS_2                           41                             19
  CLUS_3                           24                             17
  CLUS_4                           70                             62
  CLUS_5                           25                             49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = DEL PEAK 22(11Q23.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(11Q23.3) MUTATED       39     70     24     19      1
  DEL PEAK 22(11Q23.3) WILD-TYPE     39     76     97     42      1
D59V1, multiclass
        clus
vv       DEL PEAK 22(11Q23.3) MUTATED DEL PEAK 22(11Q23.3) WILD-TYPE
  CLUS_1                           39                             39
  CLUS_2                           70                             76
  CLUS_3                           24                             97
  CLUS_4                           19                             42
  CLUS_5                            1                              1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(11Q23.3) MUTATED       49     47     20     37
  DEL PEAK 22(11Q23.3) WILD-TYPE     89     80     43     43
D59V2, multiclass
        clus
vv       DEL PEAK 22(11Q23.3) MUTATED DEL PEAK 22(11Q23.3) WILD-TYPE
  CLUS_1                           49                             89
  CLUS_2                           47                             80
  CLUS_3                           20                             43
  CLUS_4                           37                             43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(11Q23.3) MUTATED       42     39     44
  DEL PEAK 22(11Q23.3) WILD-TYPE     80     75     60
D59V3, multiclass
        clus
vv       DEL PEAK 22(11Q23.3) MUTATED DEL PEAK 22(11Q23.3) WILD-TYPE
  CLUS_1                           42                             80
  CLUS_2                           39                             75
  CLUS_3                           44                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(11Q23.3) MUTATED       37     45     33     10
  DEL PEAK 22(11Q23.3) WILD-TYPE     53     76     65     21
D59V4, multiclass
        clus
vv       DEL PEAK 22(11Q23.3) MUTATED DEL PEAK 22(11Q23.3) WILD-TYPE
  CLUS_1                           37                             53
  CLUS_2                           45                             76
  CLUS_3                           33                             65
  CLUS_4                           10                             21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(11Q23.3) MUTATED       21     51     17     41     21
  DEL PEAK 22(11Q23.3) WILD-TYPE     51     84     21     62     35
D59V5, multiclass
        clus
vv       DEL PEAK 22(11Q23.3) MUTATED DEL PEAK 22(11Q23.3) WILD-TYPE
  CLUS_1                           21                             51
  CLUS_2                           51                             84
  CLUS_3                           17                             21
  CLUS_4                           41                             62
  CLUS_5                           21                             35
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(11Q23.3) MUTATED       37     48     66
  DEL PEAK 22(11Q23.3) WILD-TYPE     81     64    108
D59V6, multiclass
        clus
vv       DEL PEAK 22(11Q23.3) MUTATED DEL PEAK 22(11Q23.3) WILD-TYPE
  CLUS_1                           37                             81
  CLUS_2                           48                             64
  CLUS_3                           66                            108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(11Q23.3) MUTATED       42     24     50      9     28
  DEL PEAK 22(11Q23.3) WILD-TYPE     63     50     64     16     59
D59V7, multiclass
        clus
vv       DEL PEAK 22(11Q23.3) MUTATED DEL PEAK 22(11Q23.3) WILD-TYPE
  CLUS_1                           42                             63
  CLUS_2                           24                             50
  CLUS_3                           50                             64
  CLUS_4                            9                             16
  CLUS_5                           28                             59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(11Q23.3) MUTATED      110     28     15
  DEL PEAK 22(11Q23.3) WILD-TYPE    156     55     41
D59V8, multiclass
        clus
vv       DEL PEAK 22(11Q23.3) MUTATED DEL PEAK 22(11Q23.3) WILD-TYPE
  CLUS_1                          110                            156
  CLUS_2                           28                             55
  CLUS_3                           15                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(11Q23.3) MUTATED       40     17     53     36
  DEL PEAK 22(11Q23.3) WILD-TYPE     84     34     74     56
D59V9, multiclass
        clus
vv       DEL PEAK 22(11Q23.3) MUTATED DEL PEAK 22(11Q23.3) WILD-TYPE
  CLUS_1                           40                             84
  CLUS_2                           17                             34
  CLUS_3                           53                             74
  CLUS_4                           36                             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(11Q23.3) MUTATED       24     23     17     49     33
  DEL PEAK 22(11Q23.3) WILD-TYPE     63     37     24     83     41
D59V10, multiclass
        clus
vv       DEL PEAK 22(11Q23.3) MUTATED DEL PEAK 22(11Q23.3) WILD-TYPE
  CLUS_1                           24                             63
  CLUS_2                           23                             37
  CLUS_3                           17                             24
  CLUS_4                           49                             83
  CLUS_5                           33                             41
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = DEL PEAK 23(11Q25) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(11Q25) MUTATED       34     71     20     17      2
  DEL PEAK 23(11Q25) WILD-TYPE     44     75    101     44      0
D60V1, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                         34                           44
  CLUS_2                         71                           75
  CLUS_3                         20                          101
  CLUS_4                         17                           44
  CLUS_5                          2                            0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(11Q25) MUTATED       45     49     17     33
  DEL PEAK 23(11Q25) WILD-TYPE     93     78     46     47
D60V2, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                         45                           93
  CLUS_2                         49                           78
  CLUS_3                         17                           46
  CLUS_4                         33                           47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(11Q25) MUTATED       41     38     42
  DEL PEAK 23(11Q25) WILD-TYPE     81     76     62
D60V3, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                         41                           81
  CLUS_2                         38                           76
  CLUS_3                         42                           62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(11Q25) MUTATED       37     44     32      8
  DEL PEAK 23(11Q25) WILD-TYPE     53     77     66     23
D60V4, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                         37                           53
  CLUS_2                         44                           77
  CLUS_3                         32                           66
  CLUS_4                          8                           23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(11Q25) MUTATED       21     49     17     34     21
  DEL PEAK 23(11Q25) WILD-TYPE     51     86     21     69     35
D60V5, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                         21                           51
  CLUS_2                         49                           86
  CLUS_3                         17                           21
  CLUS_4                         34                           69
  CLUS_5                         21                           35
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(11Q25) MUTATED       36     46     60
  DEL PEAK 23(11Q25) WILD-TYPE     82     66    114
D60V6, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                         36                           82
  CLUS_2                         46                           66
  CLUS_3                         60                          114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(11Q25) MUTATED       37     24     47     10     26
  DEL PEAK 23(11Q25) WILD-TYPE     68     50     67     15     61
D60V7, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                         37                           68
  CLUS_2                         24                           50
  CLUS_3                         47                           67
  CLUS_4                         10                           15
  CLUS_5                         26                           61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(11Q25) MUTATED      103     28     13
  DEL PEAK 23(11Q25) WILD-TYPE    163     55     43
D60V8, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                        103                          163
  CLUS_2                         28                           55
  CLUS_3                         13                           43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(11Q25) MUTATED       37     16     52     32
  DEL PEAK 23(11Q25) WILD-TYPE     87     35     75     60
D60V9, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                         37                           87
  CLUS_2                         16                           35
  CLUS_3                         52                           75
  CLUS_4                         32                           60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(11Q25) MUTATED       22     22     16     48     29
  DEL PEAK 23(11Q25) WILD-TYPE     65     38     25     84     45
D60V10, multiclass
        clus
vv       DEL PEAK 23(11Q25) MUTATED DEL PEAK 23(11Q25) WILD-TYPE
  CLUS_1                         22                           65
  CLUS_2                         22                           38
  CLUS_3                         16                           25
  CLUS_4                         48                           84
  CLUS_5                         29                           45
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = DEL PEAK 24(12P13.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(12P13.1) MUTATED       12     34     11     10      1
  DEL PEAK 24(12P13.1) WILD-TYPE     66    112    110     51      1
D61V1, multiclass
        clus
vv       DEL PEAK 24(12P13.1) MUTATED DEL PEAK 24(12P13.1) WILD-TYPE
  CLUS_1                           12                             66
  CLUS_2                           34                            112
  CLUS_3                           11                            110
  CLUS_4                           10                             51
  CLUS_5                            1                              1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(12P13.1) MUTATED       14     33     11     10
  DEL PEAK 24(12P13.1) WILD-TYPE    124     94     52     70
D61V2, multiclass
        clus
vv       DEL PEAK 24(12P13.1) MUTATED DEL PEAK 24(12P13.1) WILD-TYPE
  CLUS_1                           14                            124
  CLUS_2                           33                             94
  CLUS_3                           11                             52
  CLUS_4                           10                             70
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(12P13.1) MUTATED       22     17     17
  DEL PEAK 24(12P13.1) WILD-TYPE    100     97     87
D61V3, multiclass
        clus
vv       DEL PEAK 24(12P13.1) MUTATED DEL PEAK 24(12P13.1) WILD-TYPE
  CLUS_1                           22                            100
  CLUS_2                           17                             97
  CLUS_3                           17                             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(12P13.1) MUTATED       21     19     12      4
  DEL PEAK 24(12P13.1) WILD-TYPE     69    102     86     27
D61V4, multiclass
        clus
vv       DEL PEAK 24(12P13.1) MUTATED DEL PEAK 24(12P13.1) WILD-TYPE
  CLUS_1                           21                             69
  CLUS_2                           19                            102
  CLUS_3                           12                             86
  CLUS_4                            4                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(12P13.1) MUTATED       16     36      4      5      6
  DEL PEAK 24(12P13.1) WILD-TYPE     56     99     34     98     50
D61V5, multiclass
        clus
vv       DEL PEAK 24(12P13.1) MUTATED DEL PEAK 24(12P13.1) WILD-TYPE
  CLUS_1                           16                             56
  CLUS_2                           36                             99
  CLUS_3                            4                             34
  CLUS_4                            5                             98
  CLUS_5                            6                             50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(12P13.1) MUTATED       34     18     15
  DEL PEAK 24(12P13.1) WILD-TYPE     84     94    159
D61V6, multiclass
        clus
vv       DEL PEAK 24(12P13.1) MUTATED DEL PEAK 24(12P13.1) WILD-TYPE
  CLUS_1                           34                             84
  CLUS_2                           18                             94
  CLUS_3                           15                            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(12P13.1) MUTATED        7     15     24      3     19
  DEL PEAK 24(12P13.1) WILD-TYPE     98     59     90     22     68
D61V7, multiclass
        clus
vv       DEL PEAK 24(12P13.1) MUTATED DEL PEAK 24(12P13.1) WILD-TYPE
  CLUS_1                            7                             98
  CLUS_2                           15                             59
  CLUS_3                           24                             90
  CLUS_4                            3                             22
  CLUS_5                           19                             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(12P13.1) MUTATED       41     15     12
  DEL PEAK 24(12P13.1) WILD-TYPE    225     68     44
D61V8, multiclass
        clus
vv       DEL PEAK 24(12P13.1) MUTATED DEL PEAK 24(12P13.1) WILD-TYPE
  CLUS_1                           41                            225
  CLUS_2                           15                             68
  CLUS_3                           12                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(12P13.1) MUTATED       26     11     24      6
  DEL PEAK 24(12P13.1) WILD-TYPE     98     40    103     86
D61V9, multiclass
        clus
vv       DEL PEAK 24(12P13.1) MUTATED DEL PEAK 24(12P13.1) WILD-TYPE
  CLUS_1                           26                             98
  CLUS_2                           11                             40
  CLUS_3                           24                            103
  CLUS_4                            6                             86
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(12P13.1) MUTATED       20     12      7     21      7
  DEL PEAK 24(12P13.1) WILD-TYPE     67     48     34    111     67
D61V10, multiclass
        clus
vv       DEL PEAK 24(12P13.1) MUTATED DEL PEAK 24(12P13.1) WILD-TYPE
  CLUS_1                           20                             67
  CLUS_2                           12                             48
  CLUS_3                            7                             34
  CLUS_4                           21                            111
  CLUS_5                            7                             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = DEL PEAK 25(12Q24.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(12Q24.33) MUTATED       14     42      9     22      1
  DEL PEAK 25(12Q24.33) WILD-TYPE     64    104    112     39      1
D62V1, multiclass
        clus
vv       DEL PEAK 25(12Q24.33) MUTATED DEL PEAK 25(12Q24.33) WILD-TYPE
  CLUS_1                            14                              64
  CLUS_2                            42                             104
  CLUS_3                             9                             112
  CLUS_4                            22                              39
  CLUS_5                             1                               1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(12Q24.33) MUTATED       26     30     17     15
  DEL PEAK 25(12Q24.33) WILD-TYPE    112     97     46     65
D62V2, multiclass
        clus
vv       DEL PEAK 25(12Q24.33) MUTATED DEL PEAK 25(12Q24.33) WILD-TYPE
  CLUS_1                            26                             112
  CLUS_2                            30                              97
  CLUS_3                            17                              46
  CLUS_4                            15                              65
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(12Q24.33) MUTATED       28     18     24
  DEL PEAK 25(12Q24.33) WILD-TYPE     94     96     80
D62V3, multiclass
        clus
vv       DEL PEAK 25(12Q24.33) MUTATED DEL PEAK 25(12Q24.33) WILD-TYPE
  CLUS_1                            28                              94
  CLUS_2                            18                              96
  CLUS_3                            24                              80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(12Q24.33) MUTATED       24     22     20      4
  DEL PEAK 25(12Q24.33) WILD-TYPE     66     99     78     27
D62V4, multiclass
        clus
vv       DEL PEAK 25(12Q24.33) MUTATED DEL PEAK 25(12Q24.33) WILD-TYPE
  CLUS_1                            24                              66
  CLUS_2                            22                              99
  CLUS_3                            20                              78
  CLUS_4                             4                              27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(12Q24.33) MUTATED       19     35      3     24      6
  DEL PEAK 25(12Q24.33) WILD-TYPE     53    100     35     79     50
D62V5, multiclass
        clus
vv       DEL PEAK 25(12Q24.33) MUTATED DEL PEAK 25(12Q24.33) WILD-TYPE
  CLUS_1                            19                              53
  CLUS_2                            35                             100
  CLUS_3                             3                              35
  CLUS_4                            24                              79
  CLUS_5                             6                              50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(12Q24.33) MUTATED       27     19     41
  DEL PEAK 25(12Q24.33) WILD-TYPE     91     93    133
D62V6, multiclass
        clus
vv       DEL PEAK 25(12Q24.33) MUTATED DEL PEAK 25(12Q24.33) WILD-TYPE
  CLUS_1                            27                              91
  CLUS_2                            19                              93
  CLUS_3                            41                             133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(12Q24.33) MUTATED       20     15     28      4     21
  DEL PEAK 25(12Q24.33) WILD-TYPE     85     59     86     21     66
D62V7, multiclass
        clus
vv       DEL PEAK 25(12Q24.33) MUTATED DEL PEAK 25(12Q24.33) WILD-TYPE
  CLUS_1                            20                              85
  CLUS_2                            15                              59
  CLUS_3                            28                              86
  CLUS_4                             4                              21
  CLUS_5                            21                              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(12Q24.33) MUTATED       54     19     15
  DEL PEAK 25(12Q24.33) WILD-TYPE    212     64     41
D62V8, multiclass
        clus
vv       DEL PEAK 25(12Q24.33) MUTATED DEL PEAK 25(12Q24.33) WILD-TYPE
  CLUS_1                            54                             212
  CLUS_2                            19                              64
  CLUS_3                            15                              41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(12Q24.33) MUTATED       26     10     30     20
  DEL PEAK 25(12Q24.33) WILD-TYPE     98     41     97     72
D62V9, multiclass
        clus
vv       DEL PEAK 25(12Q24.33) MUTATED DEL PEAK 25(12Q24.33) WILD-TYPE
  CLUS_1                            26                              98
  CLUS_2                            10                              41
  CLUS_3                            30                              97
  CLUS_4                            20                              72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(12Q24.33) MUTATED       20     13      7     30     16
  DEL PEAK 25(12Q24.33) WILD-TYPE     67     47     34    102     58
D62V10, multiclass
        clus
vv       DEL PEAK 25(12Q24.33) MUTATED DEL PEAK 25(12Q24.33) WILD-TYPE
  CLUS_1                            20                              67
  CLUS_2                            13                              47
  CLUS_3                             7                              34
  CLUS_4                            30                             102
  CLUS_5                            16                              58
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = DEL PEAK 26(13Q14.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(13Q14.2) MUTATED       45     53     13     43      2
  DEL PEAK 26(13Q14.2) WILD-TYPE     33     93    108     18      0
D63V1, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           45                             33
  CLUS_2                           53                             93
  CLUS_3                           13                            108
  CLUS_4                           43                             18
  CLUS_5                            2                              0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(13Q14.2) MUTATED       59     47     18     32
  DEL PEAK 26(13Q14.2) WILD-TYPE     79     80     45     48
D63V2, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           59                             79
  CLUS_2                           47                             80
  CLUS_3                           18                             45
  CLUS_4                           32                             48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(13Q14.2) MUTATED       43     30     59
  DEL PEAK 26(13Q14.2) WILD-TYPE     79     84     45
D63V3, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           43                             79
  CLUS_2                           30                             84
  CLUS_3                           59                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(13Q14.2) MUTATED       36     40     49      7
  DEL PEAK 26(13Q14.2) WILD-TYPE     54     81     49     24
D63V4, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           36                             54
  CLUS_2                           40                             81
  CLUS_3                           49                             49
  CLUS_4                            7                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(13Q14.2) MUTATED       26     41     10     50     26
  DEL PEAK 26(13Q14.2) WILD-TYPE     46     94     28     53     30
D63V5, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           26                             46
  CLUS_2                           41                             94
  CLUS_3                           10                             28
  CLUS_4                           50                             53
  CLUS_5                           26                             30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(13Q14.2) MUTATED       43     31     79
  DEL PEAK 26(13Q14.2) WILD-TYPE     75     81     95
D63V6, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           43                             75
  CLUS_2                           31                             81
  CLUS_3                           79                             95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(13Q14.2) MUTATED       53     29     33     15     26
  DEL PEAK 26(13Q14.2) WILD-TYPE     52     45     81     10     61
D63V7, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           53                             52
  CLUS_2                           29                             45
  CLUS_3                           33                             81
  CLUS_4                           15                             10
  CLUS_5                           26                             61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(13Q14.2) MUTATED      104     35     17
  DEL PEAK 26(13Q14.2) WILD-TYPE    162     48     39
D63V8, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                          104                            162
  CLUS_2                           35                             48
  CLUS_3                           17                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(13Q14.2) MUTATED       38     17     50     49
  DEL PEAK 26(13Q14.2) WILD-TYPE     86     34     77     43
D63V9, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           38                             86
  CLUS_2                           17                             34
  CLUS_3                           50                             77
  CLUS_4                           49                             43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(13Q14.2) MUTATED       26     23     15     46     44
  DEL PEAK 26(13Q14.2) WILD-TYPE     61     37     26     86     30
D63V10, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           26                             61
  CLUS_2                           23                             37
  CLUS_3                           15                             26
  CLUS_4                           46                             86
  CLUS_5                           44                             30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(64) Variable = DEL PEAK 27(14Q24.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(14Q24.1) MUTATED       31     83     10     13      0
  DEL PEAK 27(14Q24.1) WILD-TYPE     47     63    111     48      2
D64V1, multiclass
        clus
vv       DEL PEAK 27(14Q24.1) MUTATED DEL PEAK 27(14Q24.1) WILD-TYPE
  CLUS_1                           31                             47
  CLUS_2                           83                             63
  CLUS_3                           10                            111
  CLUS_4                           13                             48
  CLUS_5                            0                              2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(14Q24.1) MUTATED       36     66     23     12
  DEL PEAK 27(14Q24.1) WILD-TYPE    102     61     40     68
D64V2, multiclass
        clus
vv       DEL PEAK 27(14Q24.1) MUTATED DEL PEAK 27(14Q24.1) WILD-TYPE
  CLUS_1                           36                            102
  CLUS_2                           66                             61
  CLUS_3                           23                             40
  CLUS_4                           12                             68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(14Q24.1) MUTATED       42     37     35
  DEL PEAK 27(14Q24.1) WILD-TYPE     80     77     69
D64V3, multiclass
        clus
vv       DEL PEAK 27(14Q24.1) MUTATED DEL PEAK 27(14Q24.1) WILD-TYPE
  CLUS_1                           42                             80
  CLUS_2                           37                             77
  CLUS_3                           35                             69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(14Q24.1) MUTATED       37     44     24      9
  DEL PEAK 27(14Q24.1) WILD-TYPE     53     77     74     22
D64V4, multiclass
        clus
vv       DEL PEAK 27(14Q24.1) MUTATED DEL PEAK 27(14Q24.1) WILD-TYPE
  CLUS_1                           37                             53
  CLUS_2                           44                             77
  CLUS_3                           24                             74
  CLUS_4                            9                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(14Q24.1) MUTATED       27     56      8     21     24
  DEL PEAK 27(14Q24.1) WILD-TYPE     45     79     30     82     32
D64V5, multiclass
        clus
vv       DEL PEAK 27(14Q24.1) MUTATED DEL PEAK 27(14Q24.1) WILD-TYPE
  CLUS_1                           27                             45
  CLUS_2                           56                             79
  CLUS_3                            8                             30
  CLUS_4                           21                             82
  CLUS_5                           24                             32
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(14Q24.1) MUTATED       64     35     37
  DEL PEAK 27(14Q24.1) WILD-TYPE     54     77    137
D64V6, multiclass
        clus
vv       DEL PEAK 27(14Q24.1) MUTATED DEL PEAK 27(14Q24.1) WILD-TYPE
  CLUS_1                           64                             54
  CLUS_2                           35                             77
  CLUS_3                           37                            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(14Q24.1) MUTATED       23     37     38      9     29
  DEL PEAK 27(14Q24.1) WILD-TYPE     82     37     76     16     58
D64V7, multiclass
        clus
vv       DEL PEAK 27(14Q24.1) MUTATED DEL PEAK 27(14Q24.1) WILD-TYPE
  CLUS_1                           23                             82
  CLUS_2                           37                             37
  CLUS_3                           38                             76
  CLUS_4                            9                             16
  CLUS_5                           29                             58
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(14Q24.1) MUTATED       76     40     20
  DEL PEAK 27(14Q24.1) WILD-TYPE    190     43     36
D64V8, multiclass
        clus
vv       DEL PEAK 27(14Q24.1) MUTATED DEL PEAK 27(14Q24.1) WILD-TYPE
  CLUS_1                           76                            190
  CLUS_2                           40                             43
  CLUS_3                           20                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(14Q24.1) MUTATED       50     25     40     19
  DEL PEAK 27(14Q24.1) WILD-TYPE     74     26     87     73
D64V9, multiclass
        clus
vv       DEL PEAK 27(14Q24.1) MUTATED DEL PEAK 27(14Q24.1) WILD-TYPE
  CLUS_1                           50                             74
  CLUS_2                           25                             26
  CLUS_3                           40                             87
  CLUS_4                           19                             73
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(14Q24.1) MUTATED       27     31     20     43     13
  DEL PEAK 27(14Q24.1) WILD-TYPE     60     29     21     89     61
D64V10, multiclass
        clus
vv       DEL PEAK 27(14Q24.1) MUTATED DEL PEAK 27(14Q24.1) WILD-TYPE
  CLUS_1                           27                             60
  CLUS_2                           31                             29
  CLUS_3                           20                             21
  CLUS_4                           43                             89
  CLUS_5                           13                             61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(65) Variable = DEL PEAK 28(15Q13.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(15Q13.1) MUTATED       38     79      9     33      1
  DEL PEAK 28(15Q13.1) WILD-TYPE     40     67    112     28      1
D65V1, multiclass
        clus
vv       DEL PEAK 28(15Q13.1) MUTATED DEL PEAK 28(15Q13.1) WILD-TYPE
  CLUS_1                           38                             40
  CLUS_2                           79                             67
  CLUS_3                            9                            112
  CLUS_4                           33                             28
  CLUS_5                            1                              1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(15Q13.1) MUTATED       56     63     14     27
  DEL PEAK 28(15Q13.1) WILD-TYPE     82     64     49     53
D65V2, multiclass
        clus
vv       DEL PEAK 28(15Q13.1) MUTATED DEL PEAK 28(15Q13.1) WILD-TYPE
  CLUS_1                           56                             82
  CLUS_2                           63                             64
  CLUS_3                           14                             49
  CLUS_4                           27                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(15Q13.1) MUTATED       50     35     46
  DEL PEAK 28(15Q13.1) WILD-TYPE     72     79     58
D65V3, multiclass
        clus
vv       DEL PEAK 28(15Q13.1) MUTATED DEL PEAK 28(15Q13.1) WILD-TYPE
  CLUS_1                           50                             72
  CLUS_2                           35                             79
  CLUS_3                           46                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(15Q13.1) MUTATED       39     41     38     13
  DEL PEAK 28(15Q13.1) WILD-TYPE     51     80     60     18
D65V4, multiclass
        clus
vv       DEL PEAK 28(15Q13.1) MUTATED DEL PEAK 28(15Q13.1) WILD-TYPE
  CLUS_1                           39                             51
  CLUS_2                           41                             80
  CLUS_3                           38                             60
  CLUS_4                           13                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(15Q13.1) MUTATED       26     51      6     47     27
  DEL PEAK 28(15Q13.1) WILD-TYPE     46     84     32     56     29
D65V5, multiclass
        clus
vv       DEL PEAK 28(15Q13.1) MUTATED DEL PEAK 28(15Q13.1) WILD-TYPE
  CLUS_1                           26                             46
  CLUS_2                           51                             84
  CLUS_3                            6                             32
  CLUS_4                           47                             56
  CLUS_5                           27                             29
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(15Q13.1) MUTATED       51     38     68
  DEL PEAK 28(15Q13.1) WILD-TYPE     67     74    106
D65V6, multiclass
        clus
vv       DEL PEAK 28(15Q13.1) MUTATED DEL PEAK 28(15Q13.1) WILD-TYPE
  CLUS_1                           51                             67
  CLUS_2                           38                             74
  CLUS_3                           68                            106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(15Q13.1) MUTATED       41     41     39      8     31
  DEL PEAK 28(15Q13.1) WILD-TYPE     64     33     75     17     56
D65V7, multiclass
        clus
vv       DEL PEAK 28(15Q13.1) MUTATED DEL PEAK 28(15Q13.1) WILD-TYPE
  CLUS_1                           41                             64
  CLUS_2                           41                             33
  CLUS_3                           39                             75
  CLUS_4                            8                             17
  CLUS_5                           31                             56
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(15Q13.1) MUTATED       95     45     20
  DEL PEAK 28(15Q13.1) WILD-TYPE    171     38     36
D65V8, multiclass
        clus
vv       DEL PEAK 28(15Q13.1) MUTATED DEL PEAK 28(15Q13.1) WILD-TYPE
  CLUS_1                           95                            171
  CLUS_2                           45                             38
  CLUS_3                           20                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(15Q13.1) MUTATED       41     29     46     41
  DEL PEAK 28(15Q13.1) WILD-TYPE     83     22     81     51
D65V9, multiclass
        clus
vv       DEL PEAK 28(15Q13.1) MUTATED DEL PEAK 28(15Q13.1) WILD-TYPE
  CLUS_1                           41                             83
  CLUS_2                           29                             22
  CLUS_3                           46                             81
  CLUS_4                           41                             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(15Q13.1) MUTATED       27     32     16     48     34
  DEL PEAK 28(15Q13.1) WILD-TYPE     60     28     25     84     40
D65V10, multiclass
        clus
vv       DEL PEAK 28(15Q13.1) MUTATED DEL PEAK 28(15Q13.1) WILD-TYPE
  CLUS_1                           27                             60
  CLUS_2                           32                             28
  CLUS_3                           16                             25
  CLUS_4                           48                             84
  CLUS_5                           34                             40
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(66) Variable = DEL PEAK 29(16P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(16P13.3) MUTATED       41     80      9     43      1
  DEL PEAK 29(16P13.3) WILD-TYPE     37     66    112     18      1
D66V1, multiclass
        clus
vv       DEL PEAK 29(16P13.3) MUTATED DEL PEAK 29(16P13.3) WILD-TYPE
  CLUS_1                           41                             37
  CLUS_2                           80                             66
  CLUS_3                            9                            112
  CLUS_4                           43                             18
  CLUS_5                            1                              1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(16P13.3) MUTATED       56     66     18     34
  DEL PEAK 29(16P13.3) WILD-TYPE     82     61     45     46
D66V2, multiclass
        clus
vv       DEL PEAK 29(16P13.3) MUTATED DEL PEAK 29(16P13.3) WILD-TYPE
  CLUS_1                           56                             82
  CLUS_2                           66                             61
  CLUS_3                           18                             45
  CLUS_4                           34                             46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(16P13.3) MUTATED       54     36     55
  DEL PEAK 29(16P13.3) WILD-TYPE     68     78     49
D66V3, multiclass
        clus
vv       DEL PEAK 29(16P13.3) MUTATED DEL PEAK 29(16P13.3) WILD-TYPE
  CLUS_1                           54                             68
  CLUS_2                           36                             78
  CLUS_3                           55                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(16P13.3) MUTATED       37     46     47     15
  DEL PEAK 29(16P13.3) WILD-TYPE     53     75     51     16
D66V4, multiclass
        clus
vv       DEL PEAK 29(16P13.3) MUTATED DEL PEAK 29(16P13.3) WILD-TYPE
  CLUS_1                           37                             53
  CLUS_2                           46                             75
  CLUS_3                           47                             51
  CLUS_4                           15                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(16P13.3) MUTATED       32     55      7     51     29
  DEL PEAK 29(16P13.3) WILD-TYPE     40     80     31     52     27
D66V5, multiclass
        clus
vv       DEL PEAK 29(16P13.3) MUTATED DEL PEAK 29(16P13.3) WILD-TYPE
  CLUS_1                           32                             40
  CLUS_2                           55                             80
  CLUS_3                            7                             31
  CLUS_4                           51                             52
  CLUS_5                           29                             27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(16P13.3) MUTATED       53     41     80
  DEL PEAK 29(16P13.3) WILD-TYPE     65     71     94
D66V6, multiclass
        clus
vv       DEL PEAK 29(16P13.3) MUTATED DEL PEAK 29(16P13.3) WILD-TYPE
  CLUS_1                           53                             65
  CLUS_2                           41                             71
  CLUS_3                           80                             94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(16P13.3) MUTATED       47     32     45     11     38
  DEL PEAK 29(16P13.3) WILD-TYPE     58     42     69     14     49
D66V7, multiclass
        clus
vv       DEL PEAK 29(16P13.3) MUTATED DEL PEAK 29(16P13.3) WILD-TYPE
  CLUS_1                           47                             58
  CLUS_2                           32                             42
  CLUS_3                           45                             69
  CLUS_4                           11                             14
  CLUS_5                           38                             49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(16P13.3) MUTATED      114     36     23
  DEL PEAK 29(16P13.3) WILD-TYPE    152     47     33
D66V8, multiclass
        clus
vv       DEL PEAK 29(16P13.3) MUTATED DEL PEAK 29(16P13.3) WILD-TYPE
  CLUS_1                          114                            152
  CLUS_2                           36                             47
  CLUS_3                           23                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(16P13.3) MUTATED       50     19     54     46
  DEL PEAK 29(16P13.3) WILD-TYPE     74     32     73     46
D66V9, multiclass
        clus
vv       DEL PEAK 29(16P13.3) MUTATED DEL PEAK 29(16P13.3) WILD-TYPE
  CLUS_1                           50                             74
  CLUS_2                           19                             32
  CLUS_3                           54                             73
  CLUS_4                           46                             46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(16P13.3) MUTATED       33     25     16     57     38
  DEL PEAK 29(16P13.3) WILD-TYPE     54     35     25     75     36
D66V10, multiclass
        clus
vv       DEL PEAK 29(16P13.3) MUTATED DEL PEAK 29(16P13.3) WILD-TYPE
  CLUS_1                           33                             54
  CLUS_2                           25                             35
  CLUS_3                           16                             25
  CLUS_4                           57                             75
  CLUS_5                           38                             36
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(67) Variable = DEL PEAK 30(16Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(16Q23.1) MUTATED       45     33      8     33      0
  DEL PEAK 30(16Q23.1) WILD-TYPE     33    113    113     28      2
D67V1, multiclass
        clus
vv       DEL PEAK 30(16Q23.1) MUTATED DEL PEAK 30(16Q23.1) WILD-TYPE
  CLUS_1                           45                             33
  CLUS_2                           33                            113
  CLUS_3                            8                            113
  CLUS_4                           33                             28
  CLUS_5                            0                              2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(16Q23.1) MUTATED       39     45     11     24
  DEL PEAK 30(16Q23.1) WILD-TYPE     99     82     52     56
D67V2, multiclass
        clus
vv       DEL PEAK 30(16Q23.1) MUTATED DEL PEAK 30(16Q23.1) WILD-TYPE
  CLUS_1                           39                             99
  CLUS_2                           45                             82
  CLUS_3                           11                             52
  CLUS_4                           24                             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(16Q23.1) MUTATED       40     24     34
  DEL PEAK 30(16Q23.1) WILD-TYPE     82     90     70
D67V3, multiclass
        clus
vv       DEL PEAK 30(16Q23.1) MUTATED DEL PEAK 30(16Q23.1) WILD-TYPE
  CLUS_1                           40                             82
  CLUS_2                           24                             90
  CLUS_3                           34                             70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(16Q23.1) MUTATED       25     28     31     14
  DEL PEAK 30(16Q23.1) WILD-TYPE     65     93     67     17
D67V4, multiclass
        clus
vv       DEL PEAK 30(16Q23.1) MUTATED DEL PEAK 30(16Q23.1) WILD-TYPE
  CLUS_1                           25                             65
  CLUS_2                           28                             93
  CLUS_3                           31                             67
  CLUS_4                           14                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(16Q23.1) MUTATED       14     37      7     34     26
  DEL PEAK 30(16Q23.1) WILD-TYPE     58     98     31     69     30
D67V5, multiclass
        clus
vv       DEL PEAK 30(16Q23.1) MUTATED DEL PEAK 30(16Q23.1) WILD-TYPE
  CLUS_1                           14                             58
  CLUS_2                           37                             98
  CLUS_3                            7                             31
  CLUS_4                           34                             69
  CLUS_5                           26                             30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(16Q23.1) MUTATED       25     35     58
  DEL PEAK 30(16Q23.1) WILD-TYPE     93     77    116
D67V6, multiclass
        clus
vv       DEL PEAK 30(16Q23.1) MUTATED DEL PEAK 30(16Q23.1) WILD-TYPE
  CLUS_1                           25                             93
  CLUS_2                           35                             77
  CLUS_3                           58                            116
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(16Q23.1) MUTATED       36     24     27     14     18
  DEL PEAK 30(16Q23.1) WILD-TYPE     69     50     87     11     69
D67V7, multiclass
        clus
vv       DEL PEAK 30(16Q23.1) MUTATED DEL PEAK 30(16Q23.1) WILD-TYPE
  CLUS_1                           36                             69
  CLUS_2                           24                             50
  CLUS_3                           27                             87
  CLUS_4                           14                             11
  CLUS_5                           18                             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(16Q23.1) MUTATED       84     24     11
  DEL PEAK 30(16Q23.1) WILD-TYPE    182     59     45
D67V8, multiclass
        clus
vv       DEL PEAK 30(16Q23.1) MUTATED DEL PEAK 30(16Q23.1) WILD-TYPE
  CLUS_1                           84                            182
  CLUS_2                           24                             59
  CLUS_3                           11                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(16Q23.1) MUTATED       26     15     40     34
  DEL PEAK 30(16Q23.1) WILD-TYPE     98     36     87     58
D67V9, multiclass
        clus
vv       DEL PEAK 30(16Q23.1) MUTATED DEL PEAK 30(16Q23.1) WILD-TYPE
  CLUS_1                           26                             98
  CLUS_2                           15                             36
  CLUS_3                           40                             87
  CLUS_4                           34                             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(16Q23.1) MUTATED       17     16     11     41     30
  DEL PEAK 30(16Q23.1) WILD-TYPE     70     44     30     91     44
D67V10, multiclass
        clus
vv       DEL PEAK 30(16Q23.1) MUTATED DEL PEAK 30(16Q23.1) WILD-TYPE
  CLUS_1                           17                             70
  CLUS_2                           16                             44
  CLUS_3                           11                             30
  CLUS_4                           41                             91
  CLUS_5                           30                             44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(68) Variable = DEL PEAK 31(17P12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(17P12) MUTATED       56    100     29     22      1
  DEL PEAK 31(17P12) WILD-TYPE     22     46     92     39      1
D68V1, multiclass
        clus
vv       DEL PEAK 31(17P12) MUTATED DEL PEAK 31(17P12) WILD-TYPE
  CLUS_1                         56                           22
  CLUS_2                        100                           46
  CLUS_3                         29                           92
  CLUS_4                         22                           39
  CLUS_5                          1                            1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(17P12) MUTATED       61     84     30     33
  DEL PEAK 31(17P12) WILD-TYPE     77     43     33     47
D68V2, multiclass
        clus
vv       DEL PEAK 31(17P12) MUTATED DEL PEAK 31(17P12) WILD-TYPE
  CLUS_1                         61                           77
  CLUS_2                         84                           43
  CLUS_3                         30                           33
  CLUS_4                         33                           47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(17P12) MUTATED       58     53     58
  DEL PEAK 31(17P12) WILD-TYPE     64     61     46
D68V3, multiclass
        clus
vv       DEL PEAK 31(17P12) MUTATED DEL PEAK 31(17P12) WILD-TYPE
  CLUS_1                         58                           64
  CLUS_2                         53                           61
  CLUS_3                         58                           46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(17P12) MUTATED       50     61     46     12
  DEL PEAK 31(17P12) WILD-TYPE     40     60     52     19
D68V4, multiclass
        clus
vv       DEL PEAK 31(17P12) MUTATED DEL PEAK 31(17P12) WILD-TYPE
  CLUS_1                         50                           40
  CLUS_2                         61                           60
  CLUS_3                         46                           52
  CLUS_4                         12                           19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(17P12) MUTATED       31     74     18     48     34
  DEL PEAK 31(17P12) WILD-TYPE     41     61     20     55     22
D68V5, multiclass
        clus
vv       DEL PEAK 31(17P12) MUTATED DEL PEAK 31(17P12) WILD-TYPE
  CLUS_1                         31                           41
  CLUS_2                         74                           61
  CLUS_3                         18                           20
  CLUS_4                         48                           55
  CLUS_5                         34                           22
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(17P12) MUTATED       73     53     79
  DEL PEAK 31(17P12) WILD-TYPE     45     59     95
D68V6, multiclass
        clus
vv       DEL PEAK 31(17P12) MUTATED DEL PEAK 31(17P12) WILD-TYPE
  CLUS_1                         73                           45
  CLUS_2                         53                           59
  CLUS_3                         79                           95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(17P12) MUTATED       49     42     58     12     45
  DEL PEAK 31(17P12) WILD-TYPE     56     32     56     13     42
D68V7, multiclass
        clus
vv       DEL PEAK 31(17P12) MUTATED DEL PEAK 31(17P12) WILD-TYPE
  CLUS_1                         49                           56
  CLUS_2                         42                           32
  CLUS_3                         58                           56
  CLUS_4                         12                           13
  CLUS_5                         45                           42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(17P12) MUTATED      132     44     30
  DEL PEAK 31(17P12) WILD-TYPE    134     39     26
D68V8, multiclass
        clus
vv       DEL PEAK 31(17P12) MUTATED DEL PEAK 31(17P12) WILD-TYPE
  CLUS_1                        132                          134
  CLUS_2                         44                           39
  CLUS_3                         30                           26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(17P12) MUTATED       70     27     65     39
  DEL PEAK 31(17P12) WILD-TYPE     54     24     62     53
D68V9, multiclass
        clus
vv       DEL PEAK 31(17P12) MUTATED DEL PEAK 31(17P12) WILD-TYPE
  CLUS_1                         70                           54
  CLUS_2                         27                           24
  CLUS_3                         65                           62
  CLUS_4                         39                           53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(17P12) MUTATED       45     34     23     65     34
  DEL PEAK 31(17P12) WILD-TYPE     42     26     18     67     40
D68V10, multiclass
        clus
vv       DEL PEAK 31(17P12) MUTATED DEL PEAK 31(17P12) WILD-TYPE
  CLUS_1                         45                           42
  CLUS_2                         34                           26
  CLUS_3                         23                           18
  CLUS_4                         65                           67
  CLUS_5                         34                           40
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(69) Variable = DEL PEAK 32(18Q23) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(18Q23) MUTATED       38     86     23     30      2
  DEL PEAK 32(18Q23) WILD-TYPE     40     60     98     31      0
D69V1, multiclass
        clus
vv       DEL PEAK 32(18Q23) MUTATED DEL PEAK 32(18Q23) WILD-TYPE
  CLUS_1                         38                           40
  CLUS_2                         86                           60
  CLUS_3                         23                           98
  CLUS_4                         30                           31
  CLUS_5                          2                            0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(18Q23) MUTATED       58     60     23     38
  DEL PEAK 32(18Q23) WILD-TYPE     80     67     40     42
D69V2, multiclass
        clus
vv       DEL PEAK 32(18Q23) MUTATED DEL PEAK 32(18Q23) WILD-TYPE
  CLUS_1                         58                           80
  CLUS_2                         60                           67
  CLUS_3                         23                           40
  CLUS_4                         38                           42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(18Q23) MUTATED       53     48     48
  DEL PEAK 32(18Q23) WILD-TYPE     69     66     56
D69V3, multiclass
        clus
vv       DEL PEAK 32(18Q23) MUTATED DEL PEAK 32(18Q23) WILD-TYPE
  CLUS_1                         53                           69
  CLUS_2                         48                           66
  CLUS_3                         48                           56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(18Q23) MUTATED       43     53     41     12
  DEL PEAK 32(18Q23) WILD-TYPE     47     68     57     19
D69V4, multiclass
        clus
vv       DEL PEAK 32(18Q23) MUTATED DEL PEAK 32(18Q23) WILD-TYPE
  CLUS_1                         43                           47
  CLUS_2                         53                           68
  CLUS_3                         41                           57
  CLUS_4                         12                           19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(18Q23) MUTATED       30     62     17     46     22
  DEL PEAK 32(18Q23) WILD-TYPE     42     73     21     57     34
D69V5, multiclass
        clus
vv       DEL PEAK 32(18Q23) MUTATED DEL PEAK 32(18Q23) WILD-TYPE
  CLUS_1                         30                           42
  CLUS_2                         62                           73
  CLUS_3                         17                           21
  CLUS_4                         46                           57
  CLUS_5                         22                           34
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(18Q23) MUTATED       60     43     74
  DEL PEAK 32(18Q23) WILD-TYPE     58     69    100
D69V6, multiclass
        clus
vv       DEL PEAK 32(18Q23) MUTATED DEL PEAK 32(18Q23) WILD-TYPE
  CLUS_1                         60                           58
  CLUS_2                         43                           69
  CLUS_3                         74                          100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(18Q23) MUTATED       42     50     41      8     37
  DEL PEAK 32(18Q23) WILD-TYPE     63     24     73     17     50
D69V7, multiclass
        clus
vv       DEL PEAK 32(18Q23) MUTATED DEL PEAK 32(18Q23) WILD-TYPE
  CLUS_1                         42                           63
  CLUS_2                         50                           24
  CLUS_3                         41                           73
  CLUS_4                          8                           17
  CLUS_5                         37                           50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(18Q23) MUTATED      100     57     21
  DEL PEAK 32(18Q23) WILD-TYPE    166     26     35
D69V8, multiclass
        clus
vv       DEL PEAK 32(18Q23) MUTATED DEL PEAK 32(18Q23) WILD-TYPE
  CLUS_1                        100                          166
  CLUS_2                         57                           26
  CLUS_3                         21                           35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(18Q23) MUTATED       54     35     49     39
  DEL PEAK 32(18Q23) WILD-TYPE     70     16     78     53
D69V9, multiclass
        clus
vv       DEL PEAK 32(18Q23) MUTATED DEL PEAK 32(18Q23) WILD-TYPE
  CLUS_1                         54                           70
  CLUS_2                         35                           16
  CLUS_3                         49                           78
  CLUS_4                         39                           53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(18Q23) MUTATED       40     40     15     50     32
  DEL PEAK 32(18Q23) WILD-TYPE     47     20     26     82     42
D69V10, multiclass
        clus
vv       DEL PEAK 32(18Q23) MUTATED DEL PEAK 32(18Q23) WILD-TYPE
  CLUS_1                         40                           47
  CLUS_2                         40                           20
  CLUS_3                         15                           26
  CLUS_4                         50                           82
  CLUS_5                         32                           42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(70) Variable = DEL PEAK 33(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(19P13.3) MUTATED       32     72     21     19      1
  DEL PEAK 33(19P13.3) WILD-TYPE     46     74    100     42      1
D70V1, multiclass
        clus
vv       DEL PEAK 33(19P13.3) MUTATED DEL PEAK 33(19P13.3) WILD-TYPE
  CLUS_1                           32                             46
  CLUS_2                           72                             74
  CLUS_3                           21                            100
  CLUS_4                           19                             42
  CLUS_5                            1                              1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(19P13.3) MUTATED       50     48     17     30
  DEL PEAK 33(19P13.3) WILD-TYPE     88     79     46     50
D70V2, multiclass
        clus
vv       DEL PEAK 33(19P13.3) MUTATED DEL PEAK 33(19P13.3) WILD-TYPE
  CLUS_1                           50                             88
  CLUS_2                           48                             79
  CLUS_3                           17                             46
  CLUS_4                           30                             50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(19P13.3) MUTATED       42     32     40
  DEL PEAK 33(19P13.3) WILD-TYPE     80     82     64
D70V3, multiclass
        clus
vv       DEL PEAK 33(19P13.3) MUTATED DEL PEAK 33(19P13.3) WILD-TYPE
  CLUS_1                           42                             80
  CLUS_2                           32                             82
  CLUS_3                           40                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(19P13.3) MUTATED       37     35     35      7
  DEL PEAK 33(19P13.3) WILD-TYPE     53     86     63     24
D70V4, multiclass
        clus
vv       DEL PEAK 33(19P13.3) MUTATED DEL PEAK 33(19P13.3) WILD-TYPE
  CLUS_1                           37                             53
  CLUS_2                           35                             86
  CLUS_3                           35                             63
  CLUS_4                            7                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(19P13.3) MUTATED       24     35     13     45     26
  DEL PEAK 33(19P13.3) WILD-TYPE     48    100     25     58     30
D70V5, multiclass
        clus
vv       DEL PEAK 33(19P13.3) MUTATED DEL PEAK 33(19P13.3) WILD-TYPE
  CLUS_1                           24                             48
  CLUS_2                           35                            100
  CLUS_3                           13                             25
  CLUS_4                           45                             58
  CLUS_5                           26                             30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(19P13.3) MUTATED       49     24     70
  DEL PEAK 33(19P13.3) WILD-TYPE     69     88    104
D70V6, multiclass
        clus
vv       DEL PEAK 33(19P13.3) MUTATED DEL PEAK 33(19P13.3) WILD-TYPE
  CLUS_1                           49                             69
  CLUS_2                           24                             88
  CLUS_3                           70                            104
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(19P13.3) MUTATED       39     36     31     10     27
  DEL PEAK 33(19P13.3) WILD-TYPE     66     38     83     15     60
D70V7, multiclass
        clus
vv       DEL PEAK 33(19P13.3) MUTATED DEL PEAK 33(19P13.3) WILD-TYPE
  CLUS_1                           39                             66
  CLUS_2                           36                             38
  CLUS_3                           31                             83
  CLUS_4                           10                             15
  CLUS_5                           27                             60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(19P13.3) MUTATED       90     37     16
  DEL PEAK 33(19P13.3) WILD-TYPE    176     46     40
D70V8, multiclass
        clus
vv       DEL PEAK 33(19P13.3) MUTATED DEL PEAK 33(19P13.3) WILD-TYPE
  CLUS_1                           90                            176
  CLUS_2                           37                             46
  CLUS_3                           16                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(19P13.3) MUTATED       43     19     39     39
  DEL PEAK 33(19P13.3) WILD-TYPE     81     32     88     53
D70V9, multiclass
        clus
vv       DEL PEAK 33(19P13.3) MUTATED DEL PEAK 33(19P13.3) WILD-TYPE
  CLUS_1                           43                             81
  CLUS_2                           19                             32
  CLUS_3                           39                             88
  CLUS_4                           39                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(19P13.3) MUTATED       26     27     18     39     30
  DEL PEAK 33(19P13.3) WILD-TYPE     61     33     23     93     44
D70V10, multiclass
        clus
vv       DEL PEAK 33(19P13.3) MUTATED DEL PEAK 33(19P13.3) WILD-TYPE
  CLUS_1                           26                             61
  CLUS_2                           27                             33
  CLUS_3                           18                             23
  CLUS_4                           39                             93
  CLUS_5                           30                             44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(71) Variable = DEL PEAK 34(22Q13.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(22Q13.32) MUTATED       40     89     10     49      0
  DEL PEAK 34(22Q13.32) WILD-TYPE     38     57    111     12      2
D71V1, multiclass
        clus
vv       DEL PEAK 34(22Q13.32) MUTATED DEL PEAK 34(22Q13.32) WILD-TYPE
  CLUS_1                            40                              38
  CLUS_2                            89                              57
  CLUS_3                            10                             111
  CLUS_4                            49                              12
  CLUS_5                             0                               2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(22Q13.32) MUTATED       72     65     16     35
  DEL PEAK 34(22Q13.32) WILD-TYPE     66     62     47     45
D71V2, multiclass
        clus
vv       DEL PEAK 34(22Q13.32) MUTATED DEL PEAK 34(22Q13.32) WILD-TYPE
  CLUS_1                            72                              66
  CLUS_2                            65                              62
  CLUS_3                            16                              47
  CLUS_4                            35                              45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(22Q13.32) MUTATED       66     42     47
  DEL PEAK 34(22Q13.32) WILD-TYPE     56     72     57
D71V3, multiclass
        clus
vv       DEL PEAK 34(22Q13.32) MUTATED DEL PEAK 34(22Q13.32) WILD-TYPE
  CLUS_1                            66                              56
  CLUS_2                            42                              72
  CLUS_3                            47                              57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(22Q13.32) MUTATED       55     41     47     12
  DEL PEAK 34(22Q13.32) WILD-TYPE     35     80     51     19
D71V4, multiclass
        clus
vv       DEL PEAK 34(22Q13.32) MUTATED DEL PEAK 34(22Q13.32) WILD-TYPE
  CLUS_1                            55                              35
  CLUS_2                            41                              80
  CLUS_3                            47                              51
  CLUS_4                            12                              19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(22Q13.32) MUTATED       32     53      9     62     28
  DEL PEAK 34(22Q13.32) WILD-TYPE     40     82     29     41     28
D71V5, multiclass
        clus
vv       DEL PEAK 34(22Q13.32) MUTATED DEL PEAK 34(22Q13.32) WILD-TYPE
  CLUS_1                            32                              40
  CLUS_2                            53                              82
  CLUS_3                             9                              29
  CLUS_4                            62                              41
  CLUS_5                            28                              28
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(22Q13.32) MUTATED       58     35     91
  DEL PEAK 34(22Q13.32) WILD-TYPE     60     77     83
D71V6, multiclass
        clus
vv       DEL PEAK 34(22Q13.32) MUTATED DEL PEAK 34(22Q13.32) WILD-TYPE
  CLUS_1                            58                              60
  CLUS_2                            35                              77
  CLUS_3                            91                              83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(22Q13.32) MUTATED       56     38     39     12     42
  DEL PEAK 34(22Q13.32) WILD-TYPE     49     36     75     13     45
D71V7, multiclass
        clus
vv       DEL PEAK 34(22Q13.32) MUTATED DEL PEAK 34(22Q13.32) WILD-TYPE
  CLUS_1                            56                              49
  CLUS_2                            38                              36
  CLUS_3                            39                              75
  CLUS_4                            12                              13
  CLUS_5                            42                              45
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(22Q13.32) MUTATED      118     42     27
  DEL PEAK 34(22Q13.32) WILD-TYPE    148     41     29
D71V8, multiclass
        clus
vv       DEL PEAK 34(22Q13.32) MUTATED DEL PEAK 34(22Q13.32) WILD-TYPE
  CLUS_1                           118                             148
  CLUS_2                            42                              41
  CLUS_3                            27                              29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(22Q13.32) MUTATED       58     20     48     58
  DEL PEAK 34(22Q13.32) WILD-TYPE     66     31     79     34
D71V9, multiclass
        clus
vv       DEL PEAK 34(22Q13.32) MUTATED DEL PEAK 34(22Q13.32) WILD-TYPE
  CLUS_1                            58                              66
  CLUS_2                            20                              31
  CLUS_3                            48                              79
  CLUS_4                            58                              34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(22Q13.32) MUTATED       36     27     21     53     47
  DEL PEAK 34(22Q13.32) WILD-TYPE     51     33     20     79     27
D71V10, multiclass
        clus
vv       DEL PEAK 34(22Q13.32) MUTATED DEL PEAK 34(22Q13.32) WILD-TYPE
  CLUS_1                            36                              51
  CLUS_2                            27                              33
  CLUS_3                            21                              20
  CLUS_4                            53                              79
  CLUS_5                            47                              27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(72) Variable = DEL PEAK 35(XP11.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(XP11.3) MUTATED       17     39     21     14      0
  DEL PEAK 35(XP11.3) WILD-TYPE     61    107    100     47      2
D72V1, multiclass
        clus
vv       DEL PEAK 35(XP11.3) MUTATED DEL PEAK 35(XP11.3) WILD-TYPE
  CLUS_1                          17                            61
  CLUS_2                          39                           107
  CLUS_3                          21                           100
  CLUS_4                          14                            47
  CLUS_5                           0                             2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(XP11.3) MUTATED       28     31      8     24
  DEL PEAK 35(XP11.3) WILD-TYPE    110     96     55     56
D72V2, multiclass
        clus
vv       DEL PEAK 35(XP11.3) MUTATED DEL PEAK 35(XP11.3) WILD-TYPE
  CLUS_1                          28                           110
  CLUS_2                          31                            96
  CLUS_3                           8                            55
  CLUS_4                          24                            56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(XP11.3) MUTATED       28     24     24
  DEL PEAK 35(XP11.3) WILD-TYPE     94     90     80
D72V3, multiclass
        clus
vv       DEL PEAK 35(XP11.3) MUTATED DEL PEAK 35(XP11.3) WILD-TYPE
  CLUS_1                          28                            94
  CLUS_2                          24                            90
  CLUS_3                          24                            80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(XP11.3) MUTATED       22     27     22      5
  DEL PEAK 35(XP11.3) WILD-TYPE     68     94     76     26
D72V4, multiclass
        clus
vv       DEL PEAK 35(XP11.3) MUTATED DEL PEAK 35(XP11.3) WILD-TYPE
  CLUS_1                          22                            68
  CLUS_2                          27                            94
  CLUS_3                          22                            76
  CLUS_4                           5                            26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(XP11.3) MUTATED       14     24     12     26     14
  DEL PEAK 35(XP11.3) WILD-TYPE     58    111     26     77     42
D72V5, multiclass
        clus
vv       DEL PEAK 35(XP11.3) MUTATED DEL PEAK 35(XP11.3) WILD-TYPE
  CLUS_1                          14                            58
  CLUS_2                          24                           111
  CLUS_3                          12                            26
  CLUS_4                          26                            77
  CLUS_5                          14                            42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(XP11.3) MUTATED       23     24     43
  DEL PEAK 35(XP11.3) WILD-TYPE     95     88    131
D72V6, multiclass
        clus
vv       DEL PEAK 35(XP11.3) MUTATED DEL PEAK 35(XP11.3) WILD-TYPE
  CLUS_1                          23                            95
  CLUS_2                          24                            88
  CLUS_3                          43                           131
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(XP11.3) MUTATED       27     16     27      6     15
  DEL PEAK 35(XP11.3) WILD-TYPE     78     58     87     19     72
D72V7, multiclass
        clus
vv       DEL PEAK 35(XP11.3) MUTATED DEL PEAK 35(XP11.3) WILD-TYPE
  CLUS_1                          27                            78
  CLUS_2                          16                            58
  CLUS_3                          27                            87
  CLUS_4                           6                            19
  CLUS_5                          15                            72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(XP11.3) MUTATED       65     19      7
  DEL PEAK 35(XP11.3) WILD-TYPE    201     64     49
D72V8, multiclass
        clus
vv       DEL PEAK 35(XP11.3) MUTATED DEL PEAK 35(XP11.3) WILD-TYPE
  CLUS_1                          65                           201
  CLUS_2                          19                            64
  CLUS_3                           7                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(XP11.3) MUTATED       25      8     33     22
  DEL PEAK 35(XP11.3) WILD-TYPE     99     43     94     70
D72V9, multiclass
        clus
vv       DEL PEAK 35(XP11.3) MUTATED DEL PEAK 35(XP11.3) WILD-TYPE
  CLUS_1                          25                            99
  CLUS_2                           8                            43
  CLUS_3                          33                            94
  CLUS_4                          22                            70
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(XP11.3) MUTATED       13     13     12     31     19
  DEL PEAK 35(XP11.3) WILD-TYPE     74     47     29    101     55
D72V10, multiclass
        clus
vv       DEL PEAK 35(XP11.3) MUTATED DEL PEAK 35(XP11.3) WILD-TYPE
  CLUS_1                          13                            74
  CLUS_2                          13                            47
  CLUS_3                          12                            29
  CLUS_4                          31                           101
  CLUS_5                          19                            55
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(73) Variable = DEL PEAK 36(XQ21.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(XQ21.33) MUTATED       18     35     18     12      1
  DEL PEAK 36(XQ21.33) WILD-TYPE     60    111    103     49      1
D73V1, multiclass
        clus
vv       DEL PEAK 36(XQ21.33) MUTATED DEL PEAK 36(XQ21.33) WILD-TYPE
  CLUS_1                           18                             60
  CLUS_2                           35                            111
  CLUS_3                           18                            103
  CLUS_4                           12                             49
  CLUS_5                            1                              1
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(XQ21.33) MUTATED       19     33     11     21
  DEL PEAK 36(XQ21.33) WILD-TYPE    119     94     52     59
D73V2, multiclass
        clus
vv       DEL PEAK 36(XQ21.33) MUTATED DEL PEAK 36(XQ21.33) WILD-TYPE
  CLUS_1                           19                            119
  CLUS_2                           33                             94
  CLUS_3                           11                             52
  CLUS_4                           21                             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(XQ21.33) MUTATED       19     26     22
  DEL PEAK 36(XQ21.33) WILD-TYPE    103     88     82
D73V3, multiclass
        clus
vv       DEL PEAK 36(XQ21.33) MUTATED DEL PEAK 36(XQ21.33) WILD-TYPE
  CLUS_1                           19                            103
  CLUS_2                           26                             88
  CLUS_3                           22                             82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(XQ21.33) MUTATED       15     31     17      4
  DEL PEAK 36(XQ21.33) WILD-TYPE     75     90     81     27
D73V4, multiclass
        clus
vv       DEL PEAK 36(XQ21.33) MUTATED DEL PEAK 36(XQ21.33) WILD-TYPE
  CLUS_1                           15                             75
  CLUS_2                           31                             90
  CLUS_3                           17                             81
  CLUS_4                            4                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(XQ21.33) MUTATED        7     30     12     17     17
  DEL PEAK 36(XQ21.33) WILD-TYPE     65    105     26     86     39
D73V5, multiclass
        clus
vv       DEL PEAK 36(XQ21.33) MUTATED DEL PEAK 36(XQ21.33) WILD-TYPE
  CLUS_1                            7                             65
  CLUS_2                           30                            105
  CLUS_3                           12                             26
  CLUS_4                           17                             86
  CLUS_5                           17                             39
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(XQ21.33) MUTATED       21     31     31
  DEL PEAK 36(XQ21.33) WILD-TYPE     97     81    143
D73V6, multiclass
        clus
vv       DEL PEAK 36(XQ21.33) MUTATED DEL PEAK 36(XQ21.33) WILD-TYPE
  CLUS_1                           21                             97
  CLUS_2                           31                             81
  CLUS_3                           31                            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(XQ21.33) MUTATED       21     17     27      8     11
  DEL PEAK 36(XQ21.33) WILD-TYPE     84     57     87     17     76
D73V7, multiclass
        clus
vv       DEL PEAK 36(XQ21.33) MUTATED DEL PEAK 36(XQ21.33) WILD-TYPE
  CLUS_1                           21                             84
  CLUS_2                           17                             57
  CLUS_3                           27                             87
  CLUS_4                            8                             17
  CLUS_5                           11                             76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(XQ21.33) MUTATED       60     19      5
  DEL PEAK 36(XQ21.33) WILD-TYPE    206     64     51
D73V8, multiclass
        clus
vv       DEL PEAK 36(XQ21.33) MUTATED DEL PEAK 36(XQ21.33) WILD-TYPE
  CLUS_1                           60                            206
  CLUS_2                           19                             64
  CLUS_3                            5                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(XQ21.33) MUTATED       19     12     35     14
  DEL PEAK 36(XQ21.33) WILD-TYPE    105     39     92     78
D73V9, multiclass
        clus
vv       DEL PEAK 36(XQ21.33) MUTATED DEL PEAK 36(XQ21.33) WILD-TYPE
  CLUS_1                           19                            105
  CLUS_2                           12                             39
  CLUS_3                           35                             92
  CLUS_4                           14                             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(XQ21.33) MUTATED       11     15      8     33     13
  DEL PEAK 36(XQ21.33) WILD-TYPE     76     45     33     99     61
D73V10, multiclass
        clus
vv       DEL PEAK 36(XQ21.33) MUTATED DEL PEAK 36(XQ21.33) WILD-TYPE
  CLUS_1                           11                             76
  CLUS_2                           15                             45
  CLUS_3                            8                             33
  CLUS_4                           33                             99
  CLUS_5                           13                             61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
