gene1	gene2	pval	qval
CHD3	Amp_13q12.13	0.000105	1
BCL9	Amp_20q11.21	0.000107	1
CHD3	Amp_20p11.23	0.000107	1
ROS1	Amp_20q11.21	0.000119	1
MPHOSPH10	18q-Del	0.000124	1
DDX26B	Del_18q21.2	0.000125	1
CHD3	Amp_13q22.1	0.000129	1
CHD3	Del_18q22.1	0.000129	1
ACVR1B	Del_18q12.2	0.00013	1
ATM	20q-Amp	0.000141	1
ALPK2	Amp_20q12	0.000145	1
DDX26B	Del_18q22.1	0.000145	1
PRKDC	20p-Amp	0.000146	1
RNF43	Del_15q11.2	0.000151	1
NTAN1	Amp_20q13.12	0.000153	1
UBQLN2	Amp_20q13.12	0.000153	1
MVK	Amp_20q12	0.000158	1
MGA	Del_18q12.2	0.000165	1
CHD3	18p-Del	0.000174	1
SLC26A8	Del_18q12.2	0.000175	1
ATM	Amp_20q13.12	0.000181	1
ALPK2	Amp_20q13.12	0.000186	1
ATM	Amp_20q11.21	0.000192	1
ATM	Amp_20p11.23	0.000193	1
TP53	NAA25	0.000201	1
MPHOSPH10	18p-Del	0.000204	1
KCTD3	Amp_20p11.21	0.000208	1
ROS1	Amp_20q12	0.000212	1
CHD3	Del_18p11.31	0.000212	1
MVK	Amp_20q11.21	0.000216	1
MGA	18p-Del	0.000225	1
ROS1	Amp_20q13.12	0.00023	1
MVK	Del_18q21.2	0.000231	1
GPATCH8	Del_18q21.2	0.000231	1
C11orf30	Amp_20q13.12	0.000236	1
BCL9	Amp_20q13.12	0.000236	1
ALDH1A3	Del_18p11.31	0.00024	1
NTAN1	Amp_20q12	0.000242	1
UBQLN2	Amp_20q12	0.000242	1
ALPK2	Amp_20q11.21	0.000261	1
MVK	Del_18q22.1	0.000266	1
GPATCH8	Del_18q22.1	0.000266	1
ALPK2	Del_18q21.2	0.000287	1
MGA	Del_18p11.31	0.00029	1
NTAN1	20q-Amp	0.000293	1
UBQLN2	20q-Amp	0.000293	1
ATM	Amp_20q12	0.000297	1
BMPR2	Amp_20p11.23	0.000302	1
DDX26B	Del_18q12.2	0.000306	1
NTAN1	Amp_20q11.21	0.000312	1
UBQLN2	Amp_20q11.21	0.000312	1
8p-Amp	8p-Del	0.000314	1
C14orf43	Del_18q21.2	0.000321	1
C14orf43	Amp_20q13.12	0.000326	1
MAPK6	Del_17p12	0.00033	1
ACVR1B	18q-Del	0.000331	1
ROS1	20q-Amp	0.000339	1
SLC26A8	18q-Del	0.000347	1
BCOR	20q-Amp	0.000348	1
ALPK2	Del_18q22.1	0.000377	1
MPHOSPH10	Del_18q22.1	0.000378	1
CHD3	17p-Del	0.00038	1
BCOR	Amp_20q11.21	0.000388	1
ATM	Del_17p12	0.000388	1
RNF43	Del_1p36.11	0.000401	1
CHD3	Del_8p22	0.000415	1
RBM44	Del_18q21.2	0.000426	1
C11orf30	Amp_13q12.13	0.000438	1
PRKDC	Amp_20q13.12	0.000458	1
PRKDC	Amp_13q22.1	0.000465	1
C11orf30	Amp_20q12	0.000466	1
BCL9	Amp_20q12	0.000466	1
FBXW7	20q-Amp	0.000482	1
RBM44	Del_18q22.1	0.000487	1
BMPR2	20p-Amp	0.000505	1
MGA	18q-Del	0.000509	1
BCORL1	Amp_20q11.21	0.000519	1
PLXNA3	Del_17p12	0.000523	1
BCOR	Amp_20q13.12	0.000529	1
MVK	Del_18q12.2	0.000532	1
GPATCH8	Del_18q12.2	0.000532	1
ATP6V1B1	Del_18q12.2	0.000532	1
NAA25	Del_18q12.2	0.000532	1
FBXW7	Amp_20q12	0.000547	1
KCTD3	Del_18q21.2	0.000565	1
DDX26B	18q-Del	0.000579	1
DDX26B	Amp_20p11.21	0.000579	1
C14orf43	Amp_20q12	0.000601	1
CHD3	13q-Amp	0.000602	1
C11orf30	20q-Amp	0.000616	1
BCL9	20q-Amp	0.000616	1
PRKDC	Del_18q21.2	0.000618	1
MGA	Del_14q31.1	0.000635	1
KCTD3	Del_18q22.1	0.000658	1
PLXNA3	Del_18q22.1	0.000658	1
C11orf30	Amp_20q11.21	0.000675	1
L1TD1	Amp_20q13.12	0.000681	1
MAP4K3	Amp_20q13.12	0.000681	1
PLXNA3	Amp_20q13.12	0.000681	1
MGA	Del_8p22	0.000682	1
ARID1A	Amp_20q13.12	0.000684	1
ROS1	Amp_13q22.1	0.000719	1
FAM123B	Amp_20q11.21	0.000725	1
FKBP9	20p-Amp	0.000757	1
KCTD3	20p-Amp	0.000757	1
PRKDC	18p-Del	0.000765	1
C14orf43	20q-Amp	0.000773	1
C15orf52	Del_18q21.2	0.000785	1
CHD3	Del_8p23.2	0.000792	1
RNF43	Amp_20p11.23	0.000819	1
BCORL1	Amp_20q13.12	0.000825	1
C14orf43	Del_18q12.2	0.000832	1
C14orf43	Amp_20q11.21	0.000839	1
ARID1A	Amp_20q11.21	0.00084	1
NLRC4	Del_18q22.1	0.000858	1
BCOR	Del_18q21.2	0.00086	1
DDX26B	18p-Del	0.000873	1
L1TD1	13q-Amp	0.000876	1
CHD3	7p-Amp	0.000881	1
C15orf52	Del_18q22.1	0.000887	1
SETD2	Amp_20p11.23	0.000888	1
NAA25	Amp_20q13.12	0.000902	1
RBM44	Del_18q12.2	0.000923	1
ROS1	Del_18q21.2	0.00094	1
SETD2	20p-Amp	0.000956	1
MVK	18q-Del	0.000964	1
MVK	Amp_20p11.21	0.000964	1
GPATCH8	18q-Del	0.000964	1
ATP6V1B1	18q-Del	0.000964	1
NAA25	18q-Del	0.000964	1
SOX9	Del_8p22	0.00097	1
P2RY13	Amp_20q11.21	0.000972	1
SLC26A8	Del_18q21.2	0.000987	1
ACVR1B	Amp_20q13.12	0.000997	1
DDX26B	Del_18p11.31	0.000999	1
ARID1A	Amp_20q12	0.001	1
MVK	Amp_13q12.13	0.00103	1
ZBTB20	18q-Del	0.00103	1
ZBTB20	Amp_20p11.21	0.00103	1
PRKDC	Del_18p11.31	0.00106	1
PTCH1	18q-Del	0.00106	1
PTCH1	Del_18q12.2	0.00107	1
BCOR	Amp_20q12	0.0011	1
RNF43	Del_14q31.1	0.00112	1
PRKDC	Amp_20q11.21	0.00114	1
SLC26A8	Del_18q22.1	0.00114	1
MVK	Amp_13q22.1	0.00117	1
ATP6V1B1	Amp_13q22.1	0.00117	1
FAM123B	Amp_20q12	0.00118	1
FMN2	Amp_20q11.21	0.00118	1
BMPR2	Del_14q31.1	0.00119	1
L1TD1	Amp_20q12	0.0012	1
MAP4K3	Amp_20q12	0.0012	1
PLXNA3	Amp_20q12	0.0012	1
ARID1A	22q-Del	0.00123	1
FAM123B	Amp_20q13.12	0.00123	1
BCOR	18q-Del	0.00129	1
KDM6A	18q-Del	0.00129	1
DDX26B	Del_17p12	0.0013	1
BMPR2	17p-Del	0.00135	1
ALPK2	Del_18q12.2	0.00135	1
FBXW7	Amp_20q11.21	0.00136	1
PTCH1	Del_18q21.2	0.00137	1
PLXNA3	Del_18q12.2	0.00137	1
ROS1	20p-Amp	0.00139	1
KDM6A	13q-Amp	0.0014	1
MVK	18p-Del	0.00141	1
GPATCH8	18p-Del	0.00141	1
ATP6V1B1	18p-Del	0.00141	1
RNF43	Del_4q35.1	0.00143	1
ATP6V1B1	Amp_20q12	0.00148	1
NAA25	Amp_20q12	0.00148	1
PRKDC	Amp_20q12	0.0015	1
ZBTB20	Del_18q21.2	0.00151	1
L1TD1	20q-Amp	0.00151	1
MAP4K3	20q-Amp	0.00151	1
PLXNA3	20q-Amp	0.00151	1
PRKDC	Del_18q12.2	0.00154	1
MGA	Del_8p23.2	0.00154	1
STARD3NL	Amp_20p11.21	0.0016	1
MVK	Del_18p11.31	0.0016	1
GPATCH8	Del_18p11.31	0.0016	1
RBM44	18q-Del	0.0016	1
BCORL1	Amp_20q12	0.00161	1
ZBTB20	18p-Del	0.00162	1
ALDH1A3	18q-Del	0.00163	1
C14orf43	18q-Del	0.00163	1
MAP4K3	Amp_20q11.21	0.00163	1
PLXNA3	Amp_20q11.21	0.00163	1
FKBP9	Amp_20p11.23	0.00167	1
MAP4K3	Amp_20p11.23	0.00167	1
KCTD3	Amp_20p11.23	0.00167	1
SOX9	Amp_20q13.12	0.00168	1
SETD2	Amp_20p11.21	0.00169	1
ARID1A	20q-Amp	0.0017	1
RBM44	Amp_13q12.13	0.0017	1
BCOR	Amp_13q22.1	0.00171	1
BMPR2	Del_15q11.2	0.00171	1
FBXW7	20p-Amp	0.00175	1
ZBTB20	Del_18q22.1	0.00175	1
ALDH1A3	Amp_13q12.13	0.00175	1
FAM123B	20q-Amp	0.00178	1
ATP6V1B1	20q-Amp	0.00182	1
NAA25	20q-Amp	0.00182	1
CDH1	18q-Del	0.00186	1
ZBTB20	Del_18p11.31	0.00188	1
FMN2	Amp_20q12	0.00191	1
RBM44	Amp_13q22.1	0.00191	1
BMPR2	Del_8p22	0.00194	1
C11orf30	13q-Amp	0.00194	1
GPATCH8	Amp_20q11.21	0.00195	1
ATP6V1B1	Amp_20q11.21	0.00195	1
NAA25	Amp_20q11.21	0.00195	1
SETD2	Del_18q12.2	0.00196	1
PRKDC	Del_17p12	0.00197	1
ACVR1B	Amp_20q12	0.00198	1
PTCH1	Del_18q22.1	0.002	1
CDH1	18p-Del	0.00202	1
FMN2	Amp_20q13.12	0.00202	1
ALDH1A3	Amp_13q22.1	0.00202	1
C14orf43	Amp_13q22.1	0.00202	1
MGA	Del_17p12	0.00203	1
MVK	Del_17p12	0.00205	1
GPATCH8	Del_17p12	0.00205	1
NLRC4	Del_18q12.2	0.00207	1
BCORL1	20q-Amp	0.00211	1
SOX9	Del_8p23.2	0.00212	1
BCL9	7p-Amp	0.00219	1
TP53	ACVR1B	0.00222	1
ACVR1B	17p-Del	0.00223	1
PRKDC	Del_18q22.1	0.00224	1
BCOR	18p-Del	0.00225	1
RBM44	18p-Del	0.00228	1
PRKDC	18q-Del	0.0023	1
PRKDC	Amp_20p11.21	0.0023	1
NLRC4	Del_17p12	0.0023	1
ASXL1	Del_18q21.2	0.00231	1
FBXW7	4q-Del	0.00233	1
TPRKB	Amp_20q13.12	0.00237	1
PRKDC	20q-Amp	0.0024	1
ALPK2	18p-Del	0.00242	1
MVK	Del_8p22	0.00246	1
NAA25	Del_8p22	0.00246	1
PRKDC	Del_5q12.1	0.00247	1
ALDH1A3	18p-Del	0.0025	1
C14orf43	18p-Del	0.0025	1
CDH1	Del_18q12.2	0.00251	1
MAPK6	Del_18q21.2	0.00251	1
PRKDC	17p-Del	0.00251	1
MPHOSPH10	Del_18q21.2	0.00251	1
ALDH1A3	Del_18q21.2	0.00251	1
RBM44	Del_18p11.31	0.00256	1
GMPS	18q-Del	0.00258	1
PTCH1	20q-Amp	0.00258	1
FKBP9	Amp_20p11.21	0.00258	1
KCTD3	18q-Del	0.00258	1
PLXNA3	18q-Del	0.00258	1
ALPK2	20p-Amp	0.00259	1
ACVR1B	20q-Amp	0.00261	1
MGA	14q-Del	0.00262	1
PTCH1	Amp_20p11.23	0.00262	1
BCOR	Del_18q12.2	0.00263	1
KDM6A	Del_18q12.2	0.00263	1
NTAN1	Del_18q21.2	0.00265	1
ALPK2	Amp_20p11.23	0.00265	1
UBQLN2	Del_18q21.2	0.00265	1
PRKDC	Amp_13q12.13	0.00266	1
C15orf52	18q-Del	0.00266	1
C15orf52	Amp_20p11.21	0.00266	1
BCOR	Del_18p11.31	0.00269	1
PRKDC	Del_15q11.2	0.00275	1
L1TD1	Amp_13q12.13	0.00276	1
CDH1	Del_18q22.1	0.00277	1
MVK	20p-Amp	0.00278	1
MGA	Amp_13q22.1	0.00279	1
C15orf52	Amp_13q12.13	0.00281	1
FMN2	20q-Amp	0.00283	1
P2RY13	Amp_20q13.12	0.00284	1
ACVR1B	Amp_20q11.21	0.00286	1
MPHOSPH10	Del_18p11.31	0.00288	1
MAPK6	17p-Del	0.00289	1
MPHOSPH10	17p-Del	0.00289	1
MAPK6	Del_18q22.1	0.0029	1
PRKDC	Amp_20p11.23	0.0029	1
ALDH1A3	Del_18q22.1	0.0029	1
C14orf43	Del_18q22.1	0.0029	1
NF1	Del_21q11.2	0.00291	1
NTAN1	Del_18q22.1	0.00293	1
UBQLN2	Del_18q22.1	0.00293	1
BCL9	18q-Del	0.00294	1
BCL9	Amp_20p11.21	0.00294	1
CHD3	Amp_8q24.21	0.00295	1
ATP6V1B1	Del_18q21.2	0.00297	1
NAA25	Del_18q21.2	0.00297	1
ALPK2	Del_18p11.31	0.00305	1
RNF43	15q-Del	0.0031	1
FBXW7	Del_18p11.31	0.0031	1
BCL9	Del_18q21.2	0.0031	1
MVK	13q-Amp	0.00313	1
ATP6V1B1	13q-Amp	0.00313	1
C15orf52	Amp_13q22.1	0.00313	1
ZBTB20	Del_8p22	0.00314	1
FBXW7	Del_17p12	0.00316	1
L1TD1	Amp_13q22.1	0.00316	1
MAP4K3	Amp_13q22.1	0.00316	1
RNF43	TP53	0.0032	1
RBM44	Del_17p12	0.00323	1
FBXW7	Amp_20p11.23	0.00327	1
PTCH1	18p-Del	0.00327	1
ACVR1B	18p-Del	0.00329	1
ATP6V1B1	Del_18q22.1	0.00335	1
ROS1	18p-Del	0.00337	1
BMPR2	Del_15q15.2	0.00346	1
ATM	Del_18q12.2	0.00346	1
NLRC4	Del_18q21.2	0.00347	1
TPRKB	Amp_20q12	0.00348	1
ROS1	Del_18q22.1	0.00352	1
RNF43	Del_15q21.1	0.00356	1
Amp_12p13.33	Del_15q11.2	0.00359	1
BCL9	Del_18q22.1	0.0036	1
ZBTB20	20p-Amp	0.00361	1
RNF43	7p-Amp	0.00367	1
SOX9	Amp_20q12	0.00367	1
KDM6A	Del_18q21.2	0.00367	1
C11orf30	Amp_13q22.1	0.00368	1
C15orf52	18p-Del	0.00368	1
B2M	Del_18q12.2	0.0037	1
MVK	Del_8p23.2	0.00374	1
RBMX	Amp_20q13.12	0.00374	1
RB1	20q-Amp	0.00374	1
ATP6V1B1	Del_8p23.2	0.00374	1
NAA25	Del_8p23.2	0.00374	1
ATM	Amp_20p11.21	0.00374	1
21q-Del	Amp_8q24.21	0.00378	1
MPHOSPH10	Del_17p12	0.00379	1
ALDH1A3	Del_17p12	0.00379	1
C14orf43	Del_17p12	0.00379	1
RBM44	Del_8p22	0.00382	1
ATM	Amp_13q22.1	0.00382	1
ALPK2	18q-Del	0.00385	1
ALPK2	Amp_20p11.21	0.00385	1
RBM44	Amp_20q11.21	0.00385	1
GMPS	18p-Del	0.00385	1
KCTD3	18p-Del	0.00385	1
PLXNA3	18p-Del	0.00385	1
FBXW7	Del_4q35.1	0.00388	1
ACVR1B	Del_18p11.31	0.00389	1
Amp_12p13.33	Del_15q22.33	0.00401	1
GMPS	17p-Del	0.00404	1
PLXNA3	17p-Del	0.00404	1
TPRKB	20q-Amp	0.00408	1
NLRC4	17p-Del	0.00409	1
RNF43	Del_15q15.2	0.0041	1
ATM	Del_8q11.1	0.0041	1
C15orf52	Del_18p11.31	0.0041	1
GMPS	Del_18q21.2	0.00416	1
FKBP9	Del_18q21.2	0.00416	1
MAP4K3	Del_18q21.2	0.00416	1
PLXNA3	Del_18q21.2	0.00416	1
PTCH1	Del_17p12	0.00421	1
TPRKB	Amp_20q11.21	0.0043	1
ROS1	Del_18p11.31	0.0043	1
ROS1	Del_18q12.2	0.00433	1
NLRC4	18q-Del	0.00433	1
BCOR	Del_18q22.1	0.00436	1
BMPR2	14q-Del	0.00436	1
TP53	12q-Amp	0.00437	1
GMPS	Del_18p11.31	0.00439	1
KCTD3	Del_18p11.31	0.00439	1
PLXNA3	Del_18p11.31	0.00439	1
TP53	ZBTB20	0.00441	1
FBXW7	18p-Del	0.00446	1
RB1	Amp_20q11.21	0.00447	1
RNF43	7q-Amp	0.00448	1
P2RY13	Amp_20q12	0.00453	1
PTCH1	20p-Amp	0.00453	1
CDH1	Del_18q21.2	0.00459	1
BCL9	18p-Del	0.0046	1
ROS1	18q-Del	0.00462	1
PTCH1	Del_18p11.31	0.00464	1
C14orf43	Del_8p22	0.00465	1
SETD2	Del_18q21.2	0.00466	1
ROS1	Del_14q31.1	0.0047	1
GMPS	Del_18q22.1	0.00474	1
FKBP9	Del_18q22.1	0.00474	1
MAP4K3	Del_18q22.1	0.00474	1
ALPK2	Del_17p12	0.00476	1
NTAN1	Del_18q12.2	0.00477	1
RBM44	13q-Amp	0.00477	1
UBQLN2	Del_18q12.2	0.00477	1
8q-Amp	21q-Del	0.00482	1
RB1	Del_18q21.2	0.00483	1
EGR1	Del_18q21.2	0.00484	1
Amp_8p11.21	Del_1p33	0.005	1
SOX9	20q-Amp	0.00502	1
FBXW7	22q-Del	0.00503	1
SOX9	Del_22q13.32	0.00506	1
C15orf52	Del_17p12	0.00506	1
ZBTB20	Del_8p23.2	0.00512	1
ROS1	Amp_13q12.13	0.0052	1
EGR1	Amp_20q13.12	0.00523	1
NF2	Del_18q12.2	0.00528	1
MVK	Amp_20p11.23	0.00529	1
EGR1	Del_18q22.1	0.0053	1
15q-Del	Amp_12p13.33	0.0053	1
C14orf43	20p-Amp	0.00531	1
C11orf30	Del_18p11.31	0.00532	1
BCL9	Del_18p11.31	0.00532	1
SETD2	18q-Del	0.00534	1
RNF43	14q-Del	0.00542	1
ACVR1B	Del_17p12	0.00543	1
RB1	Amp_20q13.12	0.00544	1
PRKDC	13q-Amp	0.00546	1
P2RY13	20q-Amp	0.00549	1
PTCH1	Amp_20p11.21	0.0055	1
ROS1	13q-Amp	0.00557	1
RBM44	Del_8p23.2	0.00562	1
GPATCH8	Amp_20q13.12	0.00564	1
ATP6V1B1	Amp_20q13.12	0.00564	1
FBXW7	Amp_11p15.5	0.00565	1
C2orf29	Del_17p12	0.00568	1
KCTD3	Del_17p12	0.00568	1
MLH1	18p-Del	0.0057	1
BCOR	Amp_20p11.21	0.00571	1
MAPK6	Del_18q12.2	0.00572	1
SETD2	Del_18q22.1	0.00577	1
MLH1	Del_18q12.2	0.00582	1
BCOR	20p-Amp	0.00583	1
FBXW7	Del_18q22.1	0.00588	1
SLC26A8	18p-Del	0.00589	1
ALDH1A3	13q-Amp	0.00606	1
C14orf43	13q-Amp	0.00606	1
RBMX	Amp_20q12	0.00608	1
ARID1A	Del_18q21.2	0.00623	1
B2M	18q-Del	0.00635	1
B2M	Amp_20p11.21	0.00635	1
PTCH1	Amp_20q11.21	0.0064	1
ARID1A	Del_22q13.32	0.00656	1
C15orf52	20p-Amp	0.00656	1
SLC26A8	Del_18p11.31	0.00666	1
RB1	Del_18q22.1	0.00677	1
ROS1	Del_17p12	0.00686	1
L1TD1	Del_8p22	0.00686	1
KCTD3	Amp_8q24.21	0.00686	1
PLXNA3	Del_8p22	0.00686	1
BCOR	13q-Amp	0.00688	1
MGA	8p-Del	0.00689	1
NLRC4	18p-Del	0.00691	1
MLH1	18q-Del	0.00697	1
BCL9	Del_17p12	0.00708	1
ARID1A	17p-Del	0.00709	1
NF2	18p-Del	0.0071	1
SMAD2	Amp_20q13.12	0.00714	1
CHD3	7q-Amp	0.00726	1
C15orf52	13q-Amp	0.00726	1
NTAN1	18q-Del	0.00727	1
NTAN1	Amp_20p11.21	0.00727	1
TPRKB	Amp_20p11.21	0.00727	1
UBQLN2	18q-Del	0.00727	1
UBQLN2	Amp_20p11.21	0.00727	1
L1TD1	7p-Amp	0.00727	1
IQCD	Amp_20p11.21	0.00727	1
KDM6A	Amp_13q22.1	0.00729	1
MGA	Amp_13q12.13	0.00731	1
EGR1	Amp_20q12	0.00733	1
ASXL1	18q-Del	0.00736	1
IDH1	Del_8p23.2	0.00736	1
C14orf43	Del_8p23.2	0.00736	1
PTEN	Del_4q35.1	0.00739	1
RBMX	20q-Amp	0.00742	1
C2orf29	20q-Amp	0.00742	1
NF2	18q-Del	0.00751	1
RNF43	8p-Del	0.00755	1
NTAN1	Amp_13q12.13	0.00761	1
UBQLN2	Amp_13q12.13	0.00761	1
TP53	C15orf52	0.00765	1
FBXW7	Del_22q13.32	0.00769	1
ZBTB20	Amp_20p11.23	0.00769	1
ATM	Del_4q22.1	0.00777	1
DDX26B	17p-Del	0.00785	1
TP53	CHD3	0.00789	1
PTCH1	Amp_20q13.12	0.0079	1
RBMX	Amp_20q11.21	0.00791	1
L1TD1	Amp_20q11.21	0.00791	1
ARID1A	Del_1p36.11	0.00802	1
FBXW7	Del_18q21.2	0.00802	1
ALPK2	Del_5q21.1	0.00804	1
MLH1	Del_18q21.2	0.00806	1
FMN2	7p-Amp	0.00815	1
EGR1	Del_18q12.2	0.00822	1
SOX9	8p-Del	0.00824	1
PTCH1	Del_3p26.1	0.00826	1
ASXL1	Del_18q12.2	0.00828	1
ARID1A	Del_18q22.1	0.00831	1
TP53	ATP6V1B1	0.00833	1
NTAN1	Amp_13q22.1	0.00833	1
UBQLN2	Amp_13q22.1	0.00833	1
CTNNB1	18p-Del	0.00838	1
TOP2B	Del_18q21.2	0.00841	1
EGR1	20q-Amp	0.00843	1
SLC26A8	Del_17p12	0.00846	1
RB1	Del_18q12.2	0.00848	1
GPATCH8	Amp_20q12	0.00859	1
ROS1	17p-Del	0.00865	1
CTNNB1	20p-Amp	0.00868	1
MAP4K3	13q-Amp	0.00879	1
IDH2	13q-Amp	0.00879	1
EGR1	Amp_20q11.21	0.00883	1
GMPS	Del_18q12.2	0.00891	1
L1TD1	Del_18q12.2	0.00891	1
FKBP9	Del_18q12.2	0.00891	1
MAP4K3	Del_18q12.2	0.00891	1
KCTD3	Del_18q12.2	0.00891	1
RB1	Amp_20q12	0.00902	1
NTAN1	18p-Del	0.00953	1
UBQLN2	18p-Del	0.00953	1
SETD2	18p-Del	0.0099	1
14q-Del	Amp_12p13.33	0.00992	1
BCL9	17p-Del	0.00994	1
SLC26A8	Del_8p22	0.0101	1
MAPK6	18q-Del	0.0102	1
GPATCH8	20q-Amp	0.0102	1
21q-Del	Amp_8p11.21	0.0103	1
RNF43	4p-Del	0.0104	1
RNF43	Amp_17q12	0.0104	1
NTAN1	Del_18p11.31	0.0104	1
GPATCH8	Amp_13q12.13	0.0104	1
UBQLN2	Del_18p11.31	0.0104	1
ATP6V1B1	Amp_13q12.13	0.0104	1
PRKDC	Del_10q25.2	0.0105	1
L1TD1	Del_8p23.2	0.0105	1
KCTD3	Del_8p23.2	0.0105	1
PLXNA3	Del_8p23.2	0.0105	1
MAPK6	Amp_13q12.13	0.0108	1
C14orf43	Amp_13q12.13	0.0108	1
ATM	Del_18q21.2	0.0108	1
MVK	17p-Del	0.0109	1
GPATCH8	17p-Del	0.0109	1
STARD3NL	Amp_20q13.12	0.011	1
FBXW7	Del_15q11.2	0.011	1
RBM44	Amp_20q13.12	0.011	1
B2M	Del_18q21.2	0.0111	1
SMAD2	Amp_20q12	0.0111	1
PTCH1	17p-Del	0.0111	1
SLC26A8	Amp_20q12	0.0111	1
MGA	17p-Del	0.0112	1
C15orf52	Amp_20p11.23	0.0114	1
12q-Amp	Del_14q31.1	0.0114	1
12q-Amp	Del_18p11.31	0.0114	1
PRKDC	Del_15q22.33	0.0116	1
MGA	22q-Del	0.0116	1
GPATCH8	Amp_13q22.1	0.0116	1
CTNNB1	Amp_13q22.1	0.0116	1
NAA25	Amp_13q22.1	0.0116	1
BCOR	Del_1p36.11	0.0117	1
CDH1	20q-Amp	0.0117	1
ALPK2	Amp_13q12.13	0.0119	1
ROS1	Amp_20p11.21	0.0119	1
FBXW7	Amp_20p11.21	0.012	1
EGR1	18q-Del	0.012	1
SETD2	Del_18p11.31	0.0121	1
MAPK6	Amp_13q22.1	0.0122	1
NF1	Amp_20q11.21	0.0123	1
NF1	Amp_20q12	0.0123	1
FAM123B	Amp_13q22.1	0.0124	1
B2M	Del_18q22.1	0.0124	1
NTAN1	Del_17p12	0.0124	1
ECT2	Del_18q21.2	0.0124	1
UBQLN2	Del_17p12	0.0124	1
LINGO4	Del_17p12	0.0124	1
SLK	8p-Del	0.0124	1
PTCH1	Amp_20q12	0.0127	1
SLC26A8	13q-Amp	0.0127	1
ATM	17p-Del	0.0128	1
C11orf30	Del_18q21.2	0.0129	1
BCORL1	Del_18q21.2	0.0129	1
NF2	Del_15q22.33	0.013	1
ASXL1	Amp_20q13.12	0.013	1
Amp_12p13.33	Del_14q31.1	0.013	1
ARID1A	1q-Amp	0.0131	1
SOX9	22q-Del	0.0132	1
FMN2	7q-Amp	0.0132	1
ASXL1	18p-Del	0.0132	1
DDX26B	7p-Amp	0.0132	1
SMAD2	20q-Amp	0.0133	1
SLC26A8	20q-Amp	0.0133	1
BMPR2	Del_8p23.2	0.0136	1
MGA	13q-Amp	0.0136	1
NAA25	18p-Del	0.0136	1
RLIM	18p-Del	0.0136	1
C11orf30	7q-Amp	0.0137	1
BCL9	7q-Amp	0.0137	1
21q-Del	Amp_8p11.23	0.0138	1
BCOR	Amp_20p11.23	0.014	1
KDM6A	Amp_20p11.23	0.014	1
ASXL1	20p-Amp	0.014	1
ECT2	Del_18q22.1	0.014	1
RNF43	Del_5q12.1	0.0141	1
CDH1	Del_18p11.31	0.0141	1
SMAD2	Amp_20q11.21	0.0141	1
KIAA1586	Del_8p22	0.0141	1
SLC26A8	Amp_20q11.21	0.0141	1
FAM123B	Amp_11p15.5	0.0143	1
NF1	Amp_20q13.12	0.0143	1
ARID1A	Amp_13q12.13	0.0144	1
SOX9	Amp_20q11.21	0.0145	1
ASXL1	20q-Amp	0.0145	1
ASXL1	Amp_20p11.23	0.0145	1
MAPK6	18p-Del	0.0146	1
ZBTB20	Del_17p12	0.0146	1
FBXW7	1q-Amp	0.0147	1
C11orf30	Del_18q22.1	0.0147	1
DDX26B	Amp_8q24.21	0.0147	1
DDX26B	Del_8p22	0.0147	1
BCORL1	Del_18q22.1	0.0148	1
MGA	Del_15q21.1	0.0149	1
SLC26A8	Del_8p23.2	0.015	1
BMPR2	7p-Amp	0.0151	1
ATP6V1B1	Del_18p11.31	0.0151	1
NAA25	Del_18p11.31	0.0151	1
ATM	1p-Del	0.0151	1
TP53	BCL9	0.0152	1
BMPR2	15q-Del	0.0152	1
RBM44	17p-Del	0.0152	1
L1TD1	18q-Del	0.0152	1
L1TD1	Amp_20p11.21	0.0152	1
FKBP9	18q-Del	0.0152	1
MAP4K3	18q-Del	0.0152	1
MAP4K3	Amp_20p11.21	0.0152	1
PLXNA3	Amp_20p11.21	0.0152	1
EGR1	18p-Del	0.0153	1
RBM44	Amp_20p11.21	0.0153	1
GMPS	Amp_20q13.12	0.0153	1
C2orf29	Amp_20q13.12	0.0153	1
NTAN1	20p-Amp	0.0154	1
TPRKB	20p-Amp	0.0154	1
PTEN	4q-Del	0.0154	1
UBQLN2	20p-Amp	0.0154	1
C15orf52	Del_18q12.2	0.0156	1
ARID1A	Del_18q12.2	0.0158	1
NF2	Del_18q22.1	0.0158	1
FAM123B	Del_8p23.2	0.0159	1
NAA25	8q-Amp	0.0159	1
STARD3NL	Amp_20q12	0.016	1
ASXL1	Del_18p11.31	0.016	1
SETD2	Amp_13q12.13	0.016	1
ALPK2	Amp_17q12	0.016	1
RBM44	Amp_20q12	0.016	1
MAP4K3	Amp_13q12.13	0.016	1
KCTD3	Amp_13q12.13	0.016	1
PLXNA3	Amp_13q12.13	0.016	1
WNT1	Del_18q21.2	0.0161	1
ATM	Del_18q22.1	0.0161	1
PRKDC	15q-Del	0.0162	1
TOP2B	Del_18p11.31	0.0162	1
ARID1A	Del_14q31.1	0.0163	1
ATM	Amp_13q12.13	0.0163	1
B2M	20p-Amp	0.0164	1
DDX26B	20p-Amp	0.0164	1
C14orf43	Del_18p11.31	0.0165	1
ARID1A	Amp_16p11.2	0.0166	1
MGA	Del_15q15.2	0.0166	1
EGR1	Del_18p11.31	0.0166	1
BCOR	8q-Amp	0.0167	1
NTAN1	13q-Amp	0.0167	1
UBQLN2	13q-Amp	0.0167	1
BCORL1	Amp_20p11.21	0.0167	1
ZBTB20	Del_18q12.2	0.0168	1
FMN2	Del_18q21.2	0.0169	1
BMPR2	22q-Del	0.017	1
Amp_8p11.21	Del_16q23.1	0.017	1
TP53	NR1H3	0.0171	1
ALDH1A3	Amp_20q11.21	0.0171	1
CYLD	Del_14q31.1	0.0171	1
WNT1	Del_18q22.1	0.0172	1
PTEN	Amp_20p11.23	0.0172	1
SMAD4	Del_17p12	0.0175	1
FBXW7	17p-Del	0.0176	1
MVK	7p-Amp	0.0177	1
ZBTB20	17p-Del	0.0177	1
NAA25	7p-Amp	0.0177	1
8p-Amp	21q-Del	0.0177	1
SOX9	13q-Amp	0.0178	1
MLH1	Del_21q11.2	0.0178	1
NF2	15q-Del	0.018	1
FKBP9	Amp_13q22.1	0.018	1
IDH2	Amp_13q22.1	0.018	1
PLXNA3	Amp_13q22.1	0.018	1
B2M	13q-Amp	0.0182	1
RNF43	Del_5q22.2	0.0183	1
RNF43	Del_15q22.33	0.0183	1
C11orf30	7p-Amp	0.0184	1
C11orf30	8p-Del	0.0184	1
SETD2	Del_21q11.2	0.0185	1
ATP6V1B1	Del_17p12	0.0185	1
NAA25	Del_17p12	0.0185	1
ATM	Del_1p13.1	0.0185	1
SLK	Amp_8q24.21	0.0185	1
8p-Amp	Del_21q11.2	0.0185	1
ARID1A	Amp_13q22.1	0.0187	1
STARD3NL	20q-Amp	0.0187	1
RBM44	20q-Amp	0.0187	1
HPS3	20q-Amp	0.0187	1
RNF43	Del_1p33	0.0189	1
TOP2B	Del_18q12.2	0.0189	1
KIAA1586	Del_8p23.2	0.019	1
Amp_20q13.12	Del_16q23.1	0.019	1
SLK	Del_18q21.2	0.0192	1
L1TD1	Del_18q21.2	0.0193	1
IDH2	Del_18q21.2	0.0193	1
EGR1	Del_17p12	0.0194	1
ATM	Del_15q11.2	0.0194	1
DIP2B	7p-Amp	0.0195	1
CHD3	Del_1p36.11	0.0195	1
STARD3NL	Amp_20q11.21	0.0196	1
PRKDC	Del_21q11.2	0.0196	1
RB1	17p-Del	0.0196	1
NAA25	Del_18q22.1	0.0197	1
RLIM	Del_18q22.1	0.0197	1
NF1	Del_15q11.2	0.0198	1
NF1	Del_15q21.1	0.0198	1
ROS1	14q-Del	0.0199	1
ARID1A	Del_10q23.31	0.02	1
C11orf30	18p-Del	0.02	1
Amp_8p11.21	Del_1p13.1	0.02	1
CDH1	Del_21q11.2	0.0201	1
KDM6A	Del_22q13.32	0.0201	1
MLH1	20p-Amp	0.0202	1
DIP2B	Amp_20q13.12	0.0202	1
STARD3NL	18p-Del	0.0205	1
ASXL1	Del_18q22.1	0.0205	1
BCORL1	Amp_13q22.1	0.0205	1
BCL9	Amp_20p11.23	0.0206	1
FMN2	Del_18q22.1	0.0207	1
BCOR	Amp_13q12.13	0.0208	1
ALPK2	Del_5q12.1	0.0209	1
ATM	22q-Del	0.021	1
C15orf52	17p-Del	0.0211	1
RBMX	18p-Del	0.0212	1
ASXL1	Amp_13q12.13	0.0212	1
FKBP9	18p-Del	0.0212	1
IDH2	18p-Del	0.0212	1
DDX26B	Del_8p23.2	0.0213	1
L1TD1	Del_18q22.1	0.0215	1
ATP6V1B1	Del_8p22	0.0215	1
NAA25	Amp_8q24.21	0.0215	1
CDH1	Amp_20q13.12	0.0217	1
EGR1	Del_8p22	0.0218	1
GRB2	Del_8p22	0.0218	1
SLK	Del_18q22.1	0.0218	1
PRKDC	Del_15q21.1	0.0219	1
FBXW7	18q-Del	0.0221	1
RB1	18p-Del	0.0221	1
SLC26A8	Amp_20p11.21	0.0224	1
18q-Del	Amp_19q13.11	0.0224	1
STARD3NL	Del_18p11.31	0.0225	1
FBXW7	Del_10q25.2	0.0225	1
MLH1	Amp_13q22.1	0.0226	1
CTNNB1	Del_18p11.31	0.0227	1
KIAA1586	Amp_20q12	0.0228	1
ASXL1	Del_17p12	0.0229	1
GMPS	Amp_20q12	0.0231	1
C2orf29	Amp_20q12	0.0231	1
ATM	Del_15q22.33	0.0231	1
Amp_12p13.33	Del_18p11.31	0.0231	1
NLRC4	20q-Amp	0.0232	1
FAM123B	Amp_13q12.13	0.0233	1
NF1	21q-Del	0.0233	1
FMN2	Del_8p22	0.0234	1
ATM	18q-Del	0.0234	1
ALDH1A3	17p-Del	0.0235	1
C14orf43	17p-Del	0.0235	1
Amp_8p11.23	Del_1p13.1	0.0235	1
BMPR2	Del_15q21.1	0.0236	1
SLC26A8	Amp_13q12.13	0.0236	1
STARD3NL	7p-Amp	0.0237	1
NF1	Del_15q15.2	0.0237	1
GPATCH8	20p-Amp	0.0237	1
RPTN	7p-Amp	0.0237	1
RBM44	7p-Amp	0.0237	1
L1TD1	Del_18p11.31	0.0237	1
ATP6V1B1	20p-Amp	0.0237	1
FKBP9	Del_18p11.31	0.0237	1
IDH2	Del_18p11.31	0.0237	1
CDH1	Del_17p12	0.0238	1
KDM6A	Del_4q35.1	0.024	1
PTEN	Del_17p12	0.024	1
WNT1	Del_18q12.2	0.0242	1
NAA25	Amp_8p11.21	0.0242	1
1p-Del	Amp_8p11.21	0.0242	1
NTAN1	Amp_20p11.23	0.0243	1
WNT1	Amp_20q13.12	0.0243	1
TPRKB	Amp_20p11.23	0.0243	1
UBQLN2	Amp_20p11.23	0.0243	1
IDH1	Del_8p22	0.0246	1
ALDH1A3	Del_8p22	0.0246	1
LINGO4	Del_18q21.2	0.0246	1
ACVR1B	Del_8p22	0.0247	1
NF2	Del_15q21.1	0.0248	1
MPHOSPH10	Del_18q12.2	0.0248	1
ECT2	Del_18q12.2	0.0248	1
ALDH1A3	Del_18q12.2	0.0248	1
ASXL1	Amp_20q12	0.025	1
PIK3R1	Del_1p33	0.025	1
FMN2	Del_18q12.2	0.0251	1
TXNDC2	Amp_8q24.21	0.0253	1
NF2	Del_18q21.2	0.0253	1
PRKDC	Del_15q15.2	0.0253	1
TOP2B	Amp_8q24.21	0.0253	1
TOP2B	Del_8p22	0.0253	1
ZBTB20	Del_14q31.1	0.0255	1
BMPR2	Del_1p36.11	0.026	1
NF1	Amp_20p11.21	0.026	1
SOX9	Del_17p12	0.0261	1
GPATCH8	13q-Amp	0.0261	1
NAA25	13q-Amp	0.0261	1
8p-Amp	Del_1p13.1	0.0263	1
ARID1A	Amp_19q13.11	0.0264	1
RNF43	22q-Del	0.0269	1
RNF43	Del_4q22.1	0.0269	1
FAM123B	Amp_17q24.1	0.0269	1
KIAA1586	Amp_20q11.21	0.027	1
SLC26A8	Amp_20q13.12	0.027	1
12q-Amp	14q-Del	0.027	1
ZBTB20	8p-Del	0.0272	1
FMN2	18q-Del	0.0273	1
FMN2	Amp_20p11.21	0.0273	1
C11orf30	Del_18q12.2	0.0273	1
GMPS	20q-Amp	0.0273	1
BCL9	Del_18q12.2	0.0273	1
ARID1A	4p-Del	0.0274	1
ECT2	20p-Amp	0.0274	1
Amp_12p13.33	Del_1p33	0.0274	1
FAM123B	13q-Amp	0.0275	1
NF2	7p-Amp	0.0276	1
NF1	Del_14q31.1	0.0276	1
ARID1A	20p-Amp	0.0278	1
FBXW7	4p-Del	0.028	1
FBXW7	Amp_17q12	0.028	1
STARD3NL	Del_18q21.2	0.0284	1
EGR1	Del_8p23.2	0.0284	1
NLRC4	Del_18p11.31	0.0284	1
DCLK2	Del_18q21.2	0.0284	1
MLH1	Amp_20p11.23	0.0286	1
SMAD4	17p-Del	0.0287	1
GMPS	Amp_20q11.21	0.0288	1
BCORL1	Del_18q12.2	0.0288	1
SOX9	Del_18q12.2	0.0289	1
B2M	Amp_20p11.23	0.0289	1
DDX26B	Amp_20p11.23	0.0289	1
ECT2	Amp_20q13.12	0.029	1
ALDH1A3	Amp_20q13.12	0.029	1
SLK	Del_8p23.2	0.0291	1
12q-Amp	Del_8p23.2	0.0291	1
PLAGL2	Del_18q21.2	0.0292	1
ARID1A	Del_17p12	0.0293	1
GMPS	Del_17p12	0.0293	1
L1TD1	Del_17p12	0.0293	1
FKBP9	Del_17p12	0.0293	1
KDM6A	18p-Del	0.0294	1
RNF43	4q-Del	0.0295	1
SMAD2	Del_18q21.2	0.0296	1
PTEN	Del_3p26.1	0.0296	1
ATM	Del_15q21.1	0.0296	1
Amp_8q24.21	Del_21q11.2	0.0296	1
SOX9	4p-Del	0.0298	1
PTEN	Amp_17q12	0.0298	1
8p-Amp	Del_1p33	0.03	1
RB1	20p-Amp	0.0302	1
PRPS1	Del_17p12	0.0302	1
PTEN	Del_18q12.2	0.0303	1
Amp_20q12	Del_16q23.1	0.0303	1
NF2	Amp_11p15.5	0.0304	1
ZBTB20	7p-Amp	0.0305	1
MAPK6	13q-Amp	0.0306	1
SMAD2	18p-Del	0.0306	1
18p-Del	Amp_19q13.11	0.0306	1
SOX9	Del_18q22.1	0.0307	1
PIK3R1	Del_1p36.11	0.0307	1
FBXW7	Del_18q12.2	0.0309	1
PLAGL2	Del_18q22.1	0.031	1
WNT1	Amp_20q12	0.0311	1
CRIPAK	Del_14q31.1	0.0311	1
MAPK6	Del_14q31.1	0.0311	1
STARD3NL	Del_18q22.1	0.0311	1
MPHOSPH10	Del_14q31.1	0.0311	1
IDH1	Del_14q31.1	0.0311	1
ALPK2	17p-Del	0.0311	1
ALDH1A3	Del_14q31.1	0.0311	1
DCLK2	Del_18q22.1	0.0311	1
L1TD1	17p-Del	0.0312	1
C2orf29	17p-Del	0.0312	1
KCTD3	17p-Del	0.0312	1
SOX9	Amp_13q22.1	0.0313	1
BCOR	Del_5q22.2	0.0313	1
KDM6A	Del_15q22.33	0.0313	1
MGA	Del_22q13.32	0.0313	1
TOP2B	Amp_20q13.12	0.0313	1
Amp_12p13.33	Del_15q21.1	0.0315	1
TOP2B	Del_18q22.1	0.0317	1
NF1	Del_8q11.1	0.0318	1
L1TD1	7q-Amp	0.0318	1
FKBP9	7q-Amp	0.0318	1
MAP4K3	7q-Amp	0.0318	1
C15orf52	7p-Amp	0.0318	1
RLIM	Del_18q12.2	0.0319	1
RB1	18q-Del	0.032	1
ATM	13q-Amp	0.032	1
BCORL1	Amp_20p11.23	0.0322	1
WNT1	18q-Del	0.0325	1
ACVR1B	Amp_13q22.1	0.0326	1
ROS1	Del_21q11.2	0.0326	1
PTEN	17p-Del	0.0327	1
Amp_19q13.11	Del_18q22.1	0.0327	1
NF1	17p-Del	0.0328	1
P2RY13	Amp_20p11.21	0.0329	1
TOP2B	18q-Del	0.0329	1
IDH1	8p-Del	0.033	1
SETD2	Del_15q22.33	0.033	1
SMAD4	18p-Del	0.0331	1
SOX9	Amp_8q24.21	0.0332	1
DIP2B	Amp_20q12	0.0332	1
ARID1A	Amp_16q12.1	0.0333	1
RB1	Del_8q11.1	0.0333	1
ZBTB20	Amp_13q22.1	0.0334	1
WNT1	Amp_13q12.13	0.0335	1
ALG12	Amp_13q12.13	0.0335	1
KDM6A	Del_18p11.31	0.0336	1
TP53	UBQLN2	0.0337	1
SMAD2	Del_18p11.31	0.0338	1
Amp_19q13.11	Del_18p11.31	0.0338	1
FMN2	Del_10q25.2	0.0339	1
RBM44	20p-Amp	0.034	1
NLRC4	8q-Amp	0.034	1
CHD3	8q-Amp	0.034	1
ATM	Del_22q13.32	0.034	1
RNF43	Amp_17q24.1	0.0341	1
7q-Amp	Del_10q23.31	0.0341	1
DIP2B	8p-Amp	0.0342	1
GMPS	Del_8p22	0.0342	1
KCTD3	Del_8p22	0.0342	1
12q-Amp	18p-Del	0.0342	1
ALPK2	Amp_13q22.1	0.0343	1
NF1	20q-Amp	0.0344	1
C11orf30	Del_8p22	0.0344	1
PTCH1	Del_21q11.2	0.0344	1
BCL9	Amp_8q24.21	0.0344	1
BCL9	Del_8p22	0.0344	1
B2M	Amp_13q12.13	0.0345	1
WNT1	20q-Amp	0.0345	1
DDX26B	Amp_13q12.13	0.0345	1
RNF43	Del_5q21.1	0.0347	1
NF2	Del_15q11.2	0.0347	1
PTCH1	Del_6q26	0.0348	1
PTCH1	Del_8q11.1	0.0348	1
TOP2B	Amp_13q12.13	0.0349	1
Amp_12p13.33	Del_15q15.2	0.035	1
ASXL1	Amp_20q11.21	0.0352	1
FBXW7	SMAD2	0.0353	1
ARID1A	13q-Amp	0.0354	1
WNT1	Amp_20q11.21	0.0356	1
WNT1	Amp_13q22.1	0.0357	1
ACVR1B	Del_15q22.33	0.0358	1
ALPK2	Del_10q23.31	0.0358	1
CYLD	Amp_20q11.21	0.0359	1
FBXW7	Del_1p36.11	0.036	1
ALDH1A3	Del_8p23.2	0.036	1
DIP2B	Del_14q31.1	0.0361	1
FMN2	Amp_20p11.23	0.0362	1
ROS1	Amp_20p11.23	0.0362	1
SMAD4	Del_5q12.1	0.0362	1
FAM123B	Amp_8p11.21	0.0364	1
IDH2	Del_18q12.2	0.0364	1
ARID1A	Del_10q25.2	0.0365	1
20q-Amp	Del_16q23.1	0.0365	1
BMPR2	Amp_17q12	0.0366	1
12q-Amp	Del_22q13.32	0.0366	1
PTEN	13q-Amp	0.0367	1
CHD3	Del_4q35.1	0.0369	1
MLH1	Del_18p11.31	0.0372	1
RNF43	Amp_8q24.21	0.0373	1
KDM6A	15q-Del	0.0373	1
MAPK6	Del_15q11.2	0.0373	1
ALDH1A3	Del_15q11.2	0.0373	1
CYLD	14q-Del	0.0373	1
ACVR1B	Amp_8p11.21	0.0377	1
CTNNB1	Amp_20p11.23	0.0378	1
RBMX	20p-Amp	0.0379	1
GMPS	Del_14q31.1	0.0379	1
L1TD1	Del_14q31.1	0.0379	1
MAP4K3	20p-Amp	0.0379	1
MAP4K3	Del_14q31.1	0.0379	1
KCTD3	Del_14q31.1	0.0379	1
IDH2	20p-Amp	0.0379	1
PLXNA3	20p-Amp	0.0379	1
PLXNA3	Del_14q31.1	0.0379	1
B2M	Amp_13q22.1	0.038	1
DDX26B	Amp_13q22.1	0.038	1
MGA	Del_1p13.1	0.0383	1
SOX9	CTNNB1	0.0384	1
ATM	15q-Del	0.0384	1
MGA	Del_15q11.2	0.0386	1
TOP2B	Del_8p23.2	0.0386	1
BCL9	20p-Amp	0.0386	1
Del_16q23.1	Del_18p11.31	0.0386	1
FMN2	Del_17p12	0.0388	1
Amp_20q11.21	Del_16q23.1	0.0388	1
8p-Amp	Del_10q23.31	0.0389	1
WNT1	18p-Del	0.0392	1
MPHOSPH10	7p-Amp	0.0392	1
LINGO4	Del_18q12.2	0.0392	1
ACVR1B	Del_8p23.2	0.0393	1
SETD2	7q-Amp	0.0393	1
TP53	Del_10q25.2	0.0396	1
KDM6A	Del_18q22.1	0.0398	1
GPATCH8	Amp_20p11.23	0.0399	1
NAA25	Amp_20p11.23	0.0399	1
PIK3R1	Amp_8p11.21	0.04	1
ECT2	18q-Del	0.0401	1
ALDH1A3	Amp_20p11.21	0.0401	1
C14orf43	Amp_20p11.21	0.0401	1
KCTD3	8p-Del	0.0401	1
SLK	Del_18q12.2	0.0403	1
NF2	Del_18p11.31	0.0404	1
PTEN	20p-Amp	0.0404	1
NTAN1	17p-Del	0.0406	1
DIP2B	20q-Amp	0.0406	1
UBQLN2	17p-Del	0.0406	1
RB1	Amp_20p11.23	0.0406	1
LINGO4	17p-Del	0.0406	1
IQCD	17p-Del	0.0406	1
KDM6A	22q-Del	0.0407	1
FAM123B	Amp_8q24.21	0.0408	1
SOX9	17p-Del	0.0411	1
SLC26A8	17p-Del	0.0411	1
ATM	18p-Del	0.0411	1
17p-Del	Amp_19q13.11	0.0411	1
RNF43	Del_22q13.32	0.0412	1
SETD2	15q-Del	0.0413	1
PLAGL2	Del_18q12.2	0.0415	1
WNT1	Del_18p11.31	0.0417	1
SETD2	Del_17p12	0.0417	1
FKBP9	13q-Amp	0.042	1
KCTD3	13q-Amp	0.042	1
PLXNA3	13q-Amp	0.042	1
SLK	Amp_20p11.23	0.042	1
SOX9	Del_1p13.1	0.0421	1
MPHOSPH10	Amp_13q12.13	0.0422	1
PTEN	18q-Del	0.0422	1
ACVR1B	15q-Del	0.0423	1
ECT2	Amp_20q12	0.0425	1
ALDH1A3	Amp_20q12	0.0425	1
SLK	8q-Amp	0.0428	1
8q-Amp	Del_16q23.1	0.0428	1
MGA	Amp_11p15.5	0.0431	1
MGA	Del_1p33	0.0431	1
DIP2B	Amp_20q11.21	0.0433	1
SOX9	Del_4q35.1	0.0435	1
CDH1	20p-Amp	0.0435	1
B2M	18p-Del	0.0436	1
PRKDC	Del_19p13.3	0.0437	1
PTCH1	Del_17q24.3	0.0437	1
PTEN	Del_19p13.3	0.0438	1
BCORL1	Del_8p22	0.0438	1
HPS3	14q-Del	0.0439	1
SETD2	Amp_13q22.1	0.044	1
FAM123B	Amp_20p11.21	0.0445	1
MLH1	Del_18q22.1	0.0445	1
RHOA	Del_8p22	0.0447	1
C15orf52	Del_8p22	0.0447	1
MLH1	8q-Amp	0.0448	1
P2RY13	Del_18q21.2	0.0449	1
NR1H3	Del_18q21.2	0.0449	1
GMPS	Del_15q11.2	0.045	1
L1TD1	Del_15q11.2	0.045	1
MAP4K3	Del_15q11.2	0.045	1
PLXNA3	Del_15q11.2	0.045	1
FMN2	Del_8p23.2	0.0451	1
PTEN	Del_4q22.1	0.0451	1
C2orf29	8q-Amp	0.0452	1
KCTD3	8q-Amp	0.0452	1
HPS3	Amp_20q12	0.0453	1
ZBTB20	Del_1p36.11	0.0454	1
CTNNB1	13q-Amp	0.0455	1
CDH1	Amp_20q11.21	0.0456	1
C11orf30	18q-Del	0.0456	1
C11orf30	Amp_20p11.21	0.0456	1
ACVR1B	8p-Del	0.0459	1
SETD2	Del_4q22.1	0.0461	1
8p-Amp	22q-Del	0.0461	1
8p-Amp	Del_4q22.1	0.0461	1
SMAD4	Del_3p26.1	0.0463	1
MLH1	Del_5q12.1	0.0465	1
TOP2B	18p-Del	0.0465	1
PTCH1	7q-Amp	0.0466	1
ARID1A	18q-Del	0.0467	1
MPHOSPH10	Amp_13q22.1	0.0467	1
ALPK2	Amp_17q24.1	0.0467	1
BCORL1	Amp_12p13.33	0.0467	1
SOX9	Del_1p33	0.0471	1
WNT1	Del_17p12	0.0471	1
ALG12	Del_17p12	0.0471	1
FMN2	Del_15q21.1	0.0472	1
TP53	1q-Amp	0.0474	1
TOP2B	Amp_20q12	0.0475	1
FAM123B	7p-Amp	0.0476	1
B2M	Del_18p11.31	0.0478	1
STARD3NL	Del_18q12.2	0.0479	1
GPATCH8	Amp_20p11.21	0.0479	1
DCLK2	Del_18q12.2	0.0479	1
ATP6V1B1	Amp_20p11.21	0.0479	1
NAA25	Amp_20p11.21	0.0479	1
RLIM	18q-Del	0.0479	1
B2M	7q-Amp	0.0481	1
DDX26B	7q-Amp	0.0481	1
BCL9	Amp_13q12.13	0.0481	1
SLK	7p-Amp	0.0484	1
20p-Amp	Del_6q26	0.0485	1
GMPS	Del_8p23.2	0.0487	1
SLC26A8	8p-Del	0.0487	1
12q-Amp	Del_17p12	0.0487	1
FAM123B	20p-Amp	0.0488	1
8p-Amp	14q-Del	0.0489	1
P2RY13	Del_18q22.1	0.0491	1
ECT2	Amp_20p11.23	0.0491	1
C14orf43	Amp_20p11.23	0.0491	1
NLRC4	20p-Amp	0.0493	1
BCL9	Del_21q11.2	0.0493	1
BCL9	Del_22q13.32	0.0493	1
BCORL1	20p-Amp	0.0493	1
RB1	Del_17p12	0.0495	1
MAPK6	20q-Amp	0.0496	1
MPHOSPH10	20q-Amp	0.0496	1
ECT2	20q-Amp	0.0496	1
ALDH1A3	20q-Amp	0.0496	1
BCORL1	18q-Del	0.0496	1
FAM123B	Amp_17q12	0.0497	1
KDM6A	Amp_20q13.12	0.0497	1
ATM	8p-Del	0.0497	1
OR4D10	Amp_13q12.13	0.05	1
NAA25	Amp_13q12.13	0.05	1
MAP4K3	7p-Amp	0.0501	1
CDH1	Amp_20q12	0.0504	1
PRKDC	7p-Amp	0.0504	1
FMN2	Amp_8q24.21	0.0505	1
ROS1	Del_8p22	0.0505	1
MAPK6	Del_15q21.1	0.0506	1
ALDH1A3	Del_15q21.1	0.0506	1
SMAD4	Del_21q11.2	0.0508	1
PLAGL2	Amp_20q13.12	0.051	1
C11orf30	Del_8p23.2	0.051	1
BCL9	Del_8p23.2	0.051	1
ALG12	Del_8p22	0.0515	1
ZBTB20	14q-Del	0.0515	1
PRKDC	Del_14q31.1	0.0516	1
RB1	Del_18p11.31	0.0516	1
ATG5	Amp_20p11.23	0.0516	1
SOX9	Amp_8p11.21	0.0517	1
MGA	Del_15q22.33	0.052	1
CRIPAK	Amp_20q11.21	0.0521	1
MPHOSPH10	Amp_20q11.21	0.0521	1
ECT2	Amp_20q11.21	0.0521	1
SLC26A8	20p-Amp	0.0521	1
8p-Amp	Del_14q31.1	0.0522	1
FMN2	Del_15q15.2	0.0526	1
ROS1	Del_1p36.11	0.0526	1
SMAD2	Del_18q12.2	0.0527	1
ACVR1B	Del_15q11.2	0.0531	1
PLAGL2	18q-Del	0.0532	1
ALPK2	Del_10q25.2	0.0533	1
SLK	Del_5q22.2	0.0533	1
12q-Amp	Del_15q22.33	0.0533	1
TOP2B	8q-Amp	0.0536	1
BCL9	Amp_13q22.1	0.0536	1
MAPK6	Del_15q15.2	0.0537	1
MPHOSPH10	Del_1p36.11	0.0537	1
ALDH1A3	Del_15q15.2	0.0537	1
RB1	8q-Amp	0.0537	1
ATM	Del_4q35.1	0.0538	1
ECT2	18p-Del	0.0542	1
Amp_19q13.11	Del_15q11.2	0.0543	1
FMN2	17p-Del	0.0544	1
MGA	Del_10q23.31	0.0544	1
OR4D10	Amp_13q22.1	0.0545	1
ASXL1	Amp_17q24.1	0.0545	1
KIAA1586	Amp_20p11.21	0.0545	1
LINGO4	18q-Del	0.0545	1
STARD3NL	Amp_20p11.23	0.0546	1
FBXW7	Del_1p13.1	0.0546	1
RBM44	Amp_20p11.23	0.0546	1
PTCH1	Del_10q25.2	0.0546	1
ATM	Amp_17q12	0.0546	1
BMPR2	Del_4q35.1	0.0553	1
8q-Amp	Del_21q11.2	0.0553	1
BCORL1	13q-Amp	0.0554	1
NLRC4	Amp_8p11.23	0.0556	1
KDM6A	Amp_13q12.13	0.0558	1
FMN2	Del_14q31.1	0.0558	1
FMN2	Del_18p11.31	0.0558	1
TP53	DDX26B	0.056	1
ASXL1	Amp_13q22.1	0.056	1
HPS3	Amp_20q11.21	0.0561	1
P2RY13	Del_14q31.1	0.0562	1
NR1H3	Del_14q31.1	0.0562	1
EGR1	17p-Del	0.0562	1
DDX26B	Del_14q31.1	0.0562	1
TOP2B	20q-Amp	0.0562	1
BMPR2	Amp_11p15.5	0.0564	1
RBMX	18q-Del	0.0564	1
C2orf29	18q-Del	0.0564	1
IDH2	18q-Del	0.0564	1
C11orf30	Del_4q35.1	0.0565	1
IQCD	Amp_13q12.13	0.0565	1
SOX9	18q-Del	0.0567	1
PTCH1	Del_15q21.1	0.0567	1
CHD3	Amp_8p11.21	0.0567	1
SMAD4	Amp_6p21.1	0.0568	1
SMAD4	Del_6q26	0.0568	1
NTAN1	7p-Amp	0.0571	1
UBQLN2	7p-Amp	0.0571	1
KIAA1586	7p-Amp	0.0571	1
HPS3	Del_22q13.32	0.0571	1
B2M	Del_17p12	0.0572	1
PRKDC	Amp_17q12	0.0572	1
NR1H3	Del_17p12	0.0572	1
RB1	Amp_11p15.5	0.0574	1
PRKDC	Del_22q13.32	0.0575	1
Amp_8p11.23	Del_22q13.32	0.0575	1
SLK	Del_8p22	0.0577	1
12q-Amp	Del_8p22	0.0577	1
Del_8p22	Del_16q23.1	0.0577	1
PTEN	Del_14q31.1	0.0578	1
SLK	7q-Amp	0.0578	1
SOX9	Del_18q21.2	0.0579	1
WNT1	13q-Amp	0.058	1
ALG12	13q-Amp	0.058	1
ALPK2	13q-Amp	0.0584	1
HPS3	Del_18q21.2	0.0585	1
CHD3	22q-Del	0.0589	1
NF2	20q-Amp	0.059	1
SOX9	Del_10q23.31	0.0591	1
B2M	8p-Del	0.0591	1
RHOA	Del_8p23.2	0.0591	1
RBMX	Amp_13q12.13	0.0591	1
DDX26B	8p-Del	0.0591	1
ATM	4q-Del	0.0591	1
FKBP9	Amp_13q12.13	0.0591	1
IDH2	Amp_13q12.13	0.0591	1
C15orf52	Del_8p23.2	0.0591	1
MVK	7q-Amp	0.0592	1
ATP6V1B1	7q-Amp	0.0592	1
NAA25	7q-Amp	0.0592	1
TOP2B	Amp_20q11.21	0.0594	1
KDM6A	20p-Amp	0.0595	1
FBXW7	Amp_17q24.1	0.0595	1
CHD3	Del_14q31.1	0.0595	1
MAPK6	Del_18p11.31	0.0597	1
PTEN	Del_15q21.1	0.0597	1
ECT2	Del_18p11.31	0.0597	1
ATM	Del_17q24.3	0.0597	1
12q-Amp	Del_18q22.1	0.0598	1
GMPS	Del_15q21.1	0.0599	1
L1TD1	Del_15q21.1	0.0599	1
MAP4K3	Del_15q21.1	0.0599	1
PLXNA3	Del_15q21.1	0.0599	1
CRIPAK	14q-Del	0.0605	1
MAPK6	14q-Del	0.0605	1
MPHOSPH10	14q-Del	0.0605	1
IDH1	14q-Del	0.0605	1
ALDH1A3	14q-Del	0.0605	1
IQCD	Amp_13q22.1	0.0606	1
PLEKHF2	Amp_13q22.1	0.0606	1
SOX9	Amp_13q12.13	0.0608	1
PTCH1	Amp_11p15.5	0.0613	1
CTNNB1	Amp_13q12.13	0.0615	1
PTCH1	PCBP1	0.0615	1
FMN2	8p-Del	0.0617	1
12q-Amp	15q-Del	0.0618	1
NF2	Amp_17q12	0.0619	1
NLRC4	Amp_20q11.21	0.0621	1
ROS1	1q-Amp	0.0622	1
PLAGL2	Amp_20q12	0.0623	1
PLAGL2	18p-Del	0.0625	1
CDH1	Amp_8q24.21	0.0626	1
22q-Del	Amp_8p11.23	0.0628	1
CTNNB1	Del_18q22.1	0.063	1
APC	Del_16q23.1	0.0631	1
FAM123B	Del_17p12	0.0631	1
ALG12	Del_8p23.2	0.0632	1
ATG5	Amp_20q13.12	0.0632	1
NF2	Del_21q11.2	0.0634	1
MGA	15q-Del	0.0634	1
GMPS	Del_1p36.11	0.0634	1
L1TD1	Del_15q15.2	0.0634	1
C2orf29	Del_1p36.11	0.0634	1
MAP4K3	Del_15q15.2	0.0634	1
PLXNA3	Del_1p36.11	0.0634	1
PLXNA3	Del_15q15.2	0.0634	1
Del_15q15.2	Del_16p13.3	0.0634	1
CHD3	8p-Del	0.0635	1
BCORL1	8p-Del	0.0635	1
RB1	Amp_5p13.2	0.0637	1
PTEN	Del_17q24.3	0.0639	1
NR1H3	Amp_20q12	0.0641	1
FAM123B	Del_5q12.1	0.0644	1
20p-Amp	Del_16q23.1	0.0644	1
TOP2B	Del_17p12	0.0645	1
HPS3	Del_18q22.1	0.0647	1
RBMX	Amp_13q22.1	0.0648	1
GMPS	Amp_13q22.1	0.0648	1
KCTD3	Amp_13q22.1	0.0648	1
NF2	Amp_20q11.21	0.0649	1
RBMX	Amp_20p11.23	0.0649	1
IDH2	Amp_20p11.23	0.0649	1
PLXNA3	Amp_20p11.23	0.0649	1
ATM	Amp_11p15.5	0.065	1
B2M	Amp_8q24.21	0.0651	1
B2M	Del_8p22	0.0651	1
NAA25	Amp_8p11.23	0.0651	1
SETD2	Amp_5p13.2	0.0652	1
NR1H3	Del_15q11.2	0.0654	1
CYSLTR2	Del_15q11.2	0.0654	1
HPS3	Amp_13q12.13	0.0656	1
BCORL1	Del_8p23.2	0.0657	1
KDM6A	Del_15q21.1	0.0658	1
PLAGL2	Del_18p11.31	0.0659	1
TP53	SOX9	0.066	1
PTCH1	Del_15q15.2	0.066	1
PRKDC	Del_1p36.11	0.0662	1
ZBTB20	Del_22q13.32	0.0662	1
MLH1	Del_5q21.1	0.0665	1
MGA	Del_1p36.11	0.0665	1
RPTN	20q-Amp	0.0665	1
12q-Amp	22q-Del	0.0665	1
SLK	18q-Del	0.0666	1
SLK	Amp_20p11.21	0.0666	1
12q-Amp	18q-Del	0.0666	1
18q-Del	Del_16q23.1	0.0666	1
Amp_20p11.21	Del_16q23.1	0.0666	1
ARID1A	Del_8q11.1	0.0667	1
C11orf30	8q-Amp	0.0668	1
HPS3	Del_8p23.2	0.0668	1
PRPS1	Del_18q21.2	0.0668	1
RB1	Del_9p21.3	0.0669	1
CDH1	Amp_20p11.21	0.067	1
PRKDC	Del_8p22	0.067	1
RLIM	Del_18p11.31	0.0671	1
RLIM	Del_18q21.2	0.0671	1
TPRKB	18p-Del	0.0672	1
KIAA1586	18p-Del	0.0672	1
LINGO4	18p-Del	0.0672	1
PLEKHF2	18p-Del	0.0672	1
ALPK2	7p-Amp	0.0675	1
FBXW7	Del_1p33	0.0676	1
PLAGL2	20q-Amp	0.0677	1
L1TD1	Amp_8p11.21	0.0677	1
KCTD3	Amp_8p11.21	0.0677	1
Amp_8p11.21	Del_3p26.1	0.0677	1
NF2	Amp_20q13.12	0.0679	1
ACVR1B	Amp_8q24.21	0.068	1
PTEN	4p-Del	0.068	1
PTEN	Del_3p14.2	0.068	1
FAM123B	ECT2	0.0681	1
FAM123B	Amp_16p11.2	0.0681	1
MVK	Del_14q31.1	0.0683	1
GPATCH8	Del_14q31.1	0.0683	1
ATP6V1B1	Del_14q31.1	0.0683	1
NAA25	Del_14q31.1	0.0683	1
SETD2	Del_15q11.2	0.0687	1
CHD3	Del_5q21.1	0.0687	1
STARD3NL	18q-Del	0.0689	1
DCLK2	18q-Del	0.0689	1
SLK	Amp_8p11.21	0.0692	1
ACVR1B	Amp_20p11.21	0.0694	1
BCORL1	18p-Del	0.0694	1
PLAGL2	Amp_20q11.21	0.0696	1
FMN2	Del_5q12.1	0.0698	1
ROS1	Del_5q12.1	0.0698	1
SOX9	8q-Amp	0.0701	1
PTCH1	Del_9p21.3	0.0701	1
KDM6A	Del_1p36.11	0.0707	1
KDM6A	Del_15q15.2	0.0707	1
ATP6V1B1	17p-Del	0.0707	1
NAA25	17p-Del	0.0707	1
KIAA1586	Amp_20q13.12	0.0708	1
LINGO4	Amp_20q13.12	0.0708	1
P2RY13	20p-Amp	0.0709	1
GMPS	14q-Del	0.071	1
L1TD1	14q-Del	0.071	1
C2orf29	14q-Del	0.071	1
FKBP9	14q-Del	0.071	1
MAP4K3	14q-Del	0.071	1
PRPS1	Del_18q22.1	0.071	1
KCTD3	14q-Del	0.071	1
PLXNA3	14q-Del	0.071	1
Amp_19q13.11	Del_15q21.1	0.071	1
RHOA	Del_18q12.2	0.0711	1
RPTN	Amp_13q12.13	0.0716	1
MVK	8p-Del	0.0717	1
ATP6V1B1	8p-Del	0.0717	1
NAA25	8p-Del	0.0717	1
SETD2	13q-Amp	0.0718	1
TPRKB	Del_18p11.31	0.0719	1
RB1	Del_21q11.2	0.0719	1
KIAA1586	Del_18p11.31	0.0719	1
LINGO4	Del_18p11.31	0.0719	1
PLEKHF2	Del_18p11.31	0.0719	1
ATM	Del_15q15.2	0.0719	1
PTCH1	Del_14q31.1	0.072	1
IDH1	Del_17p12	0.0721	1
FMN2	Del_17q24.3	0.0723	1
HPS3	Amp_13q22.1	0.0724	1
SETD2	Del_22q13.32	0.0725	1
CHD3	Del_15q11.2	0.0725	1
8p-Amp	Del_22q13.32	0.0725	1
BMPR2	Del_15q22.33	0.0726	1
DIP2B	Del_18q12.2	0.0726	1
RB1	21q-Del	0.0726	1
STARD3NL	7q-Amp	0.0727	1
PRKDC	Del_8p23.2	0.0727	1
RPTN	7q-Amp	0.0727	1
RBM44	7q-Amp	0.0727	1
NR1H3	20q-Amp	0.0729	1
PTEN	Amp_13q22.1	0.0729	1
CYLD	Amp_20q12	0.073	1
FAM123B	Del_1p13.1	0.0732	1
PLAGL2	Del_17p12	0.0732	1
NF2	Del_15q15.2	0.0733	1
ACVR1B	Amp_13q12.13	0.0734	1
ALPK2	Del_8p23.2	0.0734	1
L1TD1	18p-Del	0.0741	1
MAP4K3	18p-Del	0.0741	1
CTNNB1	Amp_17q12	0.0742	1
DDX26B	8q-Amp	0.0742	1
CYLD	8p-Amp	0.0742	1
ARID1A	Del_8p22	0.0744	1
BCOR	Amp_17q12	0.0744	1
KDM6A	21q-Del	0.0744	1
KDM6A	4p-Del	0.0744	1
KDM6A	Amp_17q12	0.0744	1
NF1	14q-Del	0.0744	1
MLH1	Del_19p13.3	0.0749	1
SMAD2	Del_1p36.11	0.0749	1
ZBTB20	Del_4q35.1	0.0749	1
SLC26A8	Del_1p36.11	0.0749	1
Amp_19q13.11	Del_15q15.2	0.0749	1
FMN2	Del_15q11.2	0.0752	1
SOX9	Del_1p36.11	0.0753	1
P2RY13	Del_18q12.2	0.0755	1
NR1H3	Del_18q12.2	0.0755	1
ZBTB20	13q-Amp	0.0755	1
ACVR1B	Del_15q21.1	0.0757	1
KDM6A	Amp_20q12	0.0759	1
NR1H3	Amp_20q11.21	0.0761	1
NF2	Amp_20q12	0.0764	1
NLRC4	Amp_20q13.12	0.0764	1
CYLD	Del_18q12.2	0.0764	1
MAPK6	Del_22q13.32	0.0766	1
MPHOSPH10	Del_22q13.32	0.0766	1
IDH1	Del_22q13.32	0.0766	1
NF1	20p-Amp	0.0767	1
DDX26B	13q-Amp	0.0771	1
SLK	Del_5q21.1	0.0771	1
Amp_8q24.21	Del_1p13.1	0.0772	1
RPTN	Amp_13q22.1	0.0773	1
BCORL1	Del_18p11.31	0.0773	1
BMPR2	4q-Del	0.0776	1
PTCH1	4p-Del	0.0777	1
PTCH1	Amp_17q12	0.0777	1
ATG5	17p-Del	0.0777	1
PRPS1	17p-Del	0.0777	1
SLK	Amp_13q22.1	0.0779	1
SMAD2	18q-Del	0.0784	1
PTEN	Amp_13q12.13	0.0785	1
OR4D10	Del_17p12	0.0788	1
GPATCH8	Del_15q11.2	0.0788	1
ATP6V1B1	Del_15q11.2	0.0788	1
HPS3	Amp_20q13.12	0.0788	1
RLIM	Del_17p12	0.0788	1
ATG5	Amp_20q12	0.0788	1
ARID1A	14q-Del	0.0792	1
MAPK6	Amp_20q13.12	0.0792	1
MPHOSPH10	Amp_20q13.12	0.0792	1
IDH1	Amp_20q13.12	0.0792	1
SMAD4	16p-Amp	0.0792	1
FAM123B	Del_3p26.1	0.0794	1
SETD2	7p-Amp	0.0795	1
CDH1	21q-Del	0.0796	1
CDH1	Amp_17q12	0.0796	1
PRKDC	7q-Amp	0.08	1
PTCH1	13q-Amp	0.0802	1
Amp_11p15.5	Del_5q12.1	0.0803	1
FAM123B	Del_8p22	0.0806	1
CDH1	Amp_20p11.23	0.0808	1
RBMX	Del_18p11.31	0.0809	1
MAP4K3	Del_18p11.31	0.0809	1
SOX9	7p-Amp	0.081	1
B2M	7p-Amp	0.081	1
ACVR1B	Del_15q15.2	0.0812	1
RNF43	Del_17q24.3	0.0813	1
C2orf29	Amp_20q11.21	0.0814	1
BCOR	14q-Del	0.0817	1
KDM6A	14q-Del	0.0817	1
DIP2B	14q-Del	0.0817	1
DIP2B	Del_18q21.2	0.0818	1
EGR1	Amp_20p11.21	0.0818	1
PTEN	Del_16q23.1	0.0819	1
FBXW7	15q-Del	0.082	1
RB1	7q-Amp	0.082	1
KIAA1586	Del_17p12	0.0821	1
IQCD	Del_17p12	0.0821	1
ACVR1B	4p-Del	0.0823	1
TOP2B	Del_14q31.1	0.0823	1
MPHOSPH10	Del_8p22	0.0827	1
C14orf43	Amp_8q24.21	0.0827	1
FAM123B	Del_1p33	0.0831	1
RBM44	Del_14q31.1	0.0831	1
SLC26A8	14q-Del	0.0833	1
SMAD4	Amp_16q12.1	0.0838	1
ARID1A	16p-Amp	0.0839	1
ARID1A	5q-Del	0.0839	1
FMN2	Del_10q21.1	0.0839	1
ROS1	Del_16p13.3	0.0839	1
PRKDC	14q-Del	0.0841	1
NR1H3	Del_15q21.1	0.0841	1
EGR1	Amp_13q12.13	0.0843	1
SLC26A8	Amp_8p11.21	0.0844	1
12q-Amp	Del_15q11.2	0.0844	1
C11orf30	Del_17p12	0.0846	1
CYLD	Del_17p12	0.0846	1
FAM123B	8q-Amp	0.0847	1
PIK3R1	1q-Amp	0.0847	1
CYLD	20q-Amp	0.0847	1
BCL9	22q-Del	0.0849	1
ACVR1B	13q-Amp	0.0851	1
SLC26A8	Amp_20p11.23	0.0851	1
CTNNB1	Del_18q21.2	0.0853	1
RB1	8p-Amp	0.0859	1
MAPK6	Del_4q35.1	0.0862	1
MPHOSPH10	Del_4q35.1	0.0862	1
ALDH1A3	Del_4q35.1	0.0862	1
FAM123B	Del_18p11.31	0.0863	1
BMPR2	Amp_17q24.1	0.0863	1
ATG5	20q-Amp	0.0863	1
TXNDC2	Del_5q21.1	0.0865	1
DCLK2	18p-Del	0.0866	1
NF2	17p-Del	0.0868	1
RBM44	8p-Del	0.0868	1
SLK	20q-Amp	0.087	1
B2M	Del_8p23.2	0.0873	1
TOP2B	8p-Del	0.0873	1
CTNNB1	20q-Amp	0.0876	1
12q-Amp	17p-Del	0.0876	1
SETD2	Del_4q35.1	0.0877	1
ASXL1	13q-Amp	0.0878	1
ARID1A	Del_8p23.2	0.0881	1
FAM123B	7q-Amp	0.0884	1
B2M	Del_1p36.11	0.0884	1
NR1H3	Del_15q15.2	0.0884	1
Amp_16q12.1	Del_1p36.11	0.0884	1
ZBTB20	Amp_13q12.13	0.0885	1
18p-Del	Amp_12p13.33	0.0885	1
PTCH1	14q-Del	0.0886	1
RBMX	Del_21q11.2	0.0887	1
GPATCH8	Del_8p22	0.0887	1
GMPS	Del_21q11.2	0.0887	1
GMPS	Del_22q13.32	0.0887	1
FKBP9	Del_21q11.2	0.0887	1
FKBP9	Del_22q13.32	0.0887	1
MAP4K3	Del_21q11.2	0.0887	1
MAP4K3	Del_22q13.32	0.0887	1
SMAD2	Amp_13q22.1	0.0888	1
PTEN	Del_21q11.2	0.0888	1
SLC26A8	Amp_13q22.1	0.0888	1
PRKDC	Del_1p13.1	0.0889	1
ATM	Del_18p11.31	0.089	1
8p-Amp	Del_8p23.2	0.0892	1
C15orf52	7q-Amp	0.0893	1
NF2	7q-Amp	0.0894	1
EGR1	Amp_13q22.1	0.0897	1
KDM6A	20q-Amp	0.0898	1
LINGO4	Amp_20q12	0.0899	1
ASXL1	Amp_20p11.21	0.09	1
4p-Del	Amp_12p13.33	0.0901	1
FMN2	18p-Del	0.0902	1
RB1	Amp_20p11.21	0.0905	1
NTAN1	Del_8p22	0.0906	1
UBQLN2	Del_8p22	0.0906	1
LINGO4	Del_8p22	0.0906	1
PCBP1	Amp_8q24.21	0.0906	1
PCBP1	Del_8p22	0.0906	1
SLK	18p-Del	0.0908	1
18p-Del	Del_16q23.1	0.0908	1
DIP2B	Del_18q22.1	0.0912	1
C11orf30	Amp_8p11.23	0.0912	1
ALPK2	7q-Amp	0.0913	1
RNF43	Del_1p13.1	0.092	1
IDH1	17p-Del	0.0922	1
TOP2B	13q-Amp	0.0922	1
SOX9	Amp_5p13.2	0.0927	1
CTNNB1	18q-Del	0.093	1
CTNNB1	Amp_20p11.21	0.093	1
SOX9	Del_5q21.1	0.0932	1
FAM123B	17p-Del	0.0937	1
RNF43	Del_3p26.1	0.0938	1
RNF43	Del_16p13.3	0.0938	1
SOX9	Amp_8p11.23	0.094	1
BMPR2	Del_4q22.1	0.0946	1
DIP2B	Amp_8p11.21	0.0946	1
STARD3NL	Del_15q11.2	0.0948	1
RBM44	Del_15q11.2	0.0948	1
PRPS1	Del_18q12.2	0.0949	1
PIK3R1	Amp_13q12.13	0.095	1
BCORL1	Del_17p12	0.0951	1
ARID1A	Del_17q24.3	0.0952	1
NF2	Del_1p13.1	0.0952	1
PIK3R1	13q-Amp	0.0954	1
PTEN	Amp_11p15.5	0.0956	1
NAA25	20p-Amp	0.0958	1
HPS3	22q-Del	0.0958	1
RLIM	20p-Amp	0.0958	1
KDM6A	Del_1p13.1	0.096	1
RBMX	Del_17p12	0.0961	1
MAP4K3	Del_17p12	0.0961	1
MLH1	17p-Del	0.0964	1
C11orf30	Del_14q31.1	0.0965	1
BCL9	Del_14q31.1	0.0965	1
KIAA1586	20p-Amp	0.0966	1
IQCD	20p-Amp	0.0966	1
SOX9	Del_18p11.31	0.0967	1
NF1	Del_5q12.1	0.0969	1
C11orf30	Del_5q21.1	0.097	1
BCL9	Del_5q21.1	0.097	1
TP53	MVK	0.0971	1
ARID1A	8p-Del	0.0974	1
PTEN	20q-Amp	0.0974	1
RB1	Del_4q35.1	0.0974	1
P2RY13	14q-Del	0.0976	1
FBXW7	Del_4q22.1	0.0976	1
NR1H3	14q-Del	0.0976	1
DDX26B	14q-Del	0.0976	1
MLH1	13q-Amp	0.0977	1
C11orf30	Amp_8q24.21	0.0977	1
FMN2	Del_21q11.2	0.0979	1
FMN2	Del_22q13.32	0.0979	1
SETD2	21q-Del	0.0979	1
SETD2	Amp_17q12	0.0979	1
RHOA	18q-Del	0.0981	1
Amp_20p11.21	Del_6q26	0.0981	1
FMN2	8q-Amp	0.0984	1
SMAD2	Del_18q22.1	0.0984	1
FAM123B	Del_18q21.2	0.0985	1
MPHOSPH10	13q-Amp	0.0987	1
RPTN	Del_18q21.2	0.0987	1
KDM6A	17p-Del	0.0988	1
GMPS	Del_4q35.1	0.0991	1
FKBP9	Del_4q35.1	0.0991	1
MAP4K3	Del_4q35.1	0.0991	1
KCTD3	Del_4q35.1	0.0991	1
KIAA1586	20q-Amp	0.0992	1
LINGO4	20q-Amp	0.0992	1
PTEN	Amp_20p11.21	0.0993	1
MLH1	Del_17p12	0.0996	1
GPATCH8	Del_15q21.1	0.0996	1
ATP6V1B1	Del_15q21.1	0.0996	1
NLRC4	Amp_17q12	0.1	1
CHD3	4p-Del	0.1	1
CHD3	Amp_17q12	0.1	1
ATM	Del_10q25.2	0.1	1
BCORL1	Amp_17q12	0.1	1
SLK	Del_18p11.31	0.1	1
SOX9	Del_14q31.1	0.101	1
NF1	Amp_20p11.23	0.101	1
CTNNB1	Del_5q12.1	0.101	1
RB1	Amp_13q12.13	0.101	1
C15orf52	Del_14q31.1	0.101	1
CDH1	THOC7	0.102	1
FMN2	Del_5q21.1	0.102	1
NF1	1p-Del	0.102	1
FBXW7	Del_10q21.1	0.102	1
FBXW7	Del_10q23.31	0.102	1
C11orf30	Amp_8p11.21	0.102	1
TOP2B	Amp_13q22.1	0.102	1
LINGO4	Amp_20q11.21	0.102	1
IQCD	Amp_20q11.21	0.102	1
ATG5	7p-Amp	0.102	1
SMAD4	Amp_5p13.2	0.102	1
8q-Amp	Del_1p13.1	0.102	1
RNF43	Amp_11p15.5	0.103	1
CDH1	17p-Del	0.103	1
CDH1	Amp_17q24.1	0.103	1
MAPK6	Del_15q22.33	0.103	1
OR4D10	13q-Amp	0.103	1
PRKDC	Amp_11p15.5	0.103	1
MPHOSPH10	Del_15q22.33	0.103	1
CTNNB1	Del_18q12.2	0.103	1
SLC26A8	Del_22q13.32	0.103	1
IQCD	13q-Amp	0.103	1
PLEKHF2	13q-Amp	0.103	1
HPS3	Del_18q12.2	0.103	1
CYLD	Del_18q21.2	0.103	1
BCOR	Del_17p12	0.104	1
MLH1	Del_6p25.3	0.104	1
KDM6A	7q-Amp	0.104	1
KDM6A	Amp_11p15.5	0.104	1
KDM6A	Del_17p12	0.104	1
MVK	Del_1p36.11	0.104	1
DIP2B	7q-Amp	0.104	1
DIP2B	Amp_11p15.5	0.104	1
GPATCH8	Del_1p36.11	0.104	1
GPATCH8	Del_15q15.2	0.104	1
ATP6V1B1	Del_1p36.11	0.104	1
ATP6V1B1	Del_15q15.2	0.104	1
NAA25	Del_1p36.11	0.104	1
ARID1A	PCBP1	0.105	1
ARID1A	Del_18p11.31	0.105	1
ACVR1B	Del_1p13.1	0.105	1
B2M	Amp_8p11.21	0.105	1
BMPR2	7q-Amp	0.105	1
TPRKB	Del_18q21.2	0.105	1
DDX26B	Amp_8p11.21	0.105	1
KIAA1586	Del_18q21.2	0.105	1
IQCD	Del_18q21.2	0.105	1
PLEKHF2	Del_18q21.2	0.105	1
Amp_12p13.33	Del_5q22.2	0.105	1
MLH1	Amp_17q24.1	0.106	1
RBMX	Del_18q12.2	0.106	1
RPTN	Del_18q22.1	0.106	1
C2orf29	Del_18q12.2	0.106	1
PIK3R1	8p-Amp	0.106	1
CHD3	Del_15q15.2	0.106	1
WNT1	17p-Del	0.107	1
FBXW7	Del_6q26	0.107	1
ALG12	17p-Del	0.107	1
C11orf30	20p-Amp	0.107	1
RB1	ATP6V1B1	0.107	1
PTCH1	4q-Del	0.107	1
RNF43	SELPLG	0.108	1
RNF43	Del_9p21.3	0.108	1
RNF43	Del_19p13.3	0.108	1
FAM123B	Amp_16q12.1	0.108	1
CRIPAK	Amp_20q12	0.108	1
KDM6A	Del_21q11.2	0.108	1
MAPK6	Amp_20q12	0.108	1
P2RY13	18q-Del	0.108	1
FBXW7	Del_5q12.1	0.108	1
ASXL1	Del_8p23.2	0.108	1
ALG12	Del_18q21.2	0.108	1
NR1H3	18q-Del	0.108	1
ZBTB20	22q-Del	0.108	1
ZBTB20	Del_4q22.1	0.108	1
MPHOSPH10	Amp_20q12	0.108	1
IDH1	Amp_20q12	0.108	1
PTEN	Del_15q11.2	0.108	1
1q-Amp	Del_4q22.1	0.108	1
20q-Amp	Del_6q26	0.108	1
NF1	Del_1p36.11	0.109	1
NF1	Del_4q22.1	0.109	1
L1TD1	Amp_8q24.21	0.109	1
C2orf29	Amp_8q24.21	0.109	1
PIK3R1	Amp_13q22.1	0.109	1
ATM	Del_19p13.3	0.109	1
FKBP9	Amp_8q24.21	0.109	1
FKBP9	Del_8p22	0.109	1
HPS3	Del_5q21.1	0.109	1
MAP4K3	Del_8p22	0.109	1
7p-Amp	22q-Del	0.109	1
PTEN	Amp_5p13.2	0.11	1
NLRC4	Amp_20q12	0.11	1
PTCH1	Del_5q12.1	0.11	1
P2RY13	Amp_20p11.23	0.111	1
ATXN3L	PIK3R1	0.111	1
CTNNB1	Del_17p12	0.111	1
PTEN	Del_18q21.2	0.111	1
NLRC4	Amp_8q24.21	0.111	1
PTCH1	1p-Del	0.111	1
SLK	Amp_17q12	0.111	1
SMAD4	1p-Del	0.111	1
Amp_17q12	Del_16q23.1	0.111	1
NF1	Del_18q12.2	0.112	1
P2RY13	Amp_13q12.13	0.112	1
NR1H3	Amp_13q12.13	0.112	1
MPHOSPH10	Del_8p23.2	0.112	1
TPRKB	Del_18q22.1	0.112	1
KIAA1586	Del_18q22.1	0.112	1
LINGO4	Del_18q22.1	0.112	1
IQCD	Del_18q22.1	0.112	1
PLEKHF2	Del_18q22.1	0.112	1
CYLD	Del_18q22.1	0.112	1
SMAD4	Del_18p11.31	0.112	1
NTAN1	Del_8p23.2	0.113	1
CRIPAK	Amp_20p11.21	0.113	1
NF1	Del_17p12	0.113	1
ZBTB20	7q-Amp	0.113	1
THOC7	Del_8p23.2	0.113	1
UBQLN2	Del_8p23.2	0.113	1
LINGO4	Del_8p23.2	0.113	1
HPS3	Del_14q31.1	0.113	1
PCBP1	Del_8p23.2	0.113	1
SLK	Amp_20q13.12	0.113	1
ARID1A	IDH2	0.114	1
ARID1A	Del_3p26.1	0.114	1
ARID1A	Del_10q21.1	0.114	1
ZFP36L2	14q-Del	0.114	1
MVK	14q-Del	0.114	1
ALG12	Del_18q22.1	0.114	1
GPATCH8	14q-Del	0.114	1
ROS1	Del_10q23.31	0.114	1
ATP6V1B1	14q-Del	0.114	1
NAA25	14q-Del	0.114	1
SLC26A8	Del_4q35.1	0.114	1
C15orf52	Del_15q11.2	0.114	1
12q-Amp	Del_15q21.1	0.114	1
Amp_20p11.23	Del_16q23.1	0.114	1
MAPK6	15q-Del	0.115	1
NF1	Del_1p13.1	0.115	1
NF1	Del_18p11.31	0.115	1
ASXL1	Amp_16p11.2	0.115	1
MPHOSPH10	15q-Del	0.115	1
ROS1	7p-Amp	0.115	1
PTEN	14q-Del	0.115	1
PTEN	Del_5q12.1	0.115	1
ALDH1A3	15q-Del	0.115	1
APC	LINGO4	0.116	1
FAM123B	Del_14q31.1	0.116	1
ATXN3L	17p-Del	0.116	1
RBMX	17p-Del	0.116	1
GPATCH8	Del_8p23.2	0.116	1
SETD2	Del_1p36.11	0.116	1
FKBP9	17p-Del	0.116	1
CYLD	18q-Del	0.116	1
ARID1A	Del_15q22.33	0.117	1
FBXW7	Del_15q22.33	0.117	1
RBMX	Amp_12p13.33	0.117	1
ALPK2	Del_3p26.1	0.117	1
ALPK2	Del_10q21.1	0.117	1
ALPK2	Del_14q31.1	0.117	1
GMPS	Del_5q22.2	0.117	1
GMPS	Del_15q22.33	0.117	1
L1TD1	Del_5q22.2	0.117	1
L1TD1	Del_15q22.33	0.117	1
BCL9	13q-Amp	0.117	1
CYLD	Amp_20q13.12	0.117	1
MAP4K3	Amp_12p13.33	0.117	1
MAP4K3	Del_15q22.33	0.117	1
KCTD3	Del_15q22.33	0.117	1
PLXNA3	Del_15q22.33	0.117	1
Amp_12p13.33	Del_10q21.1	0.117	1
ARID1A	7q-Amp	0.118	1
TP53	LINGO4	0.118	1
KDM6A	Amp_20p11.21	0.118	1
STARD3NL	Del_15q21.1	0.118	1
PRKDC	5q-Del	0.118	1
DIP2B	18q-Del	0.118	1
RBM44	Del_15q21.1	0.118	1
L1TD1	20p-Amp	0.118	1
NLRC4	Amp_20p11.21	0.118	1
RNF43	Del_21q11.2	0.119	1
FAM123B	Del_1p36.11	0.119	1
B2M	Del_22q13.32	0.119	1
P2RY13	Del_21q11.2	0.119	1
CYSLTR2	Del_21q11.2	0.119	1
RHOA	18p-Del	0.12	1
STARD3NL	Del_8p22	0.12	1
P2RY13	Amp_13q22.1	0.12	1
NR1H3	Amp_13q22.1	0.12	1
SETD2	Del_5q12.1	0.12	1
ROS1	Del_15q21.1	0.12	1
RPTN	Del_8p22	0.12	1
RBM44	8q-Amp	0.12	1
RBM44	Amp_8q24.21	0.12	1
NLRC4	14q-Del	0.12	1
CHD3	14q-Del	0.12	1
CDH1	8q-Amp	0.121	1
MLH1	Amp_17q12	0.121	1
RB1	Del_14q31.1	0.121	1
PRPS1	18q-Del	0.121	1
SLK	Del_17p12	0.121	1
12q-Amp	Del_1p36.11	0.121	1
12q-Amp	Del_15q15.2	0.121	1
ARID1A	Del_15q11.2	0.122	1
ACVR1B	Del_21q11.2	0.122	1
ACVR1B	Del_22q13.32	0.122	1
BCOR	Amp_8q24.21	0.122	1
CRIPAK	20q-Amp	0.122	1
MAPK6	22q-Del	0.122	1
ZBTB20	Del_5q21.1	0.122	1
MPHOSPH10	22q-Del	0.122	1
MPHOSPH10	Del_4q22.1	0.122	1
IDH1	20q-Amp	0.122	1
IDH1	22q-Del	0.122	1
ALDH1A3	22q-Del	0.122	1
RB1	Del_1p13.1	0.122	1
TOP2B	4p-Del	0.122	1
TOP2B	Amp_17q12	0.122	1
TOP2B	Del_3p14.2	0.122	1
SMAD4	Del_3p14.2	0.122	1
8q-Amp	Del_1p33	0.122	1
Amp_5p13.2	Del_3p14.2	0.122	1
SOX9	Del_21q11.2	0.123	1
STARD3NL	Del_15q15.2	0.123	1
SETD2	Del_3p26.1	0.123	1
SETD2	Del_16p13.3	0.123	1
ALPK2	14q-Del	0.123	1
RPTN	Del_1p36.11	0.123	1
RBM44	Del_1p36.11	0.123	1
RBM44	Del_15q15.2	0.123	1
NLRC4	Amp_13q12.13	0.123	1
BCORL1	Amp_13q12.13	0.123	1
12q-Amp	Del_18q21.2	0.123	1
Del_16q23.1	Del_18q21.2	0.123	1
BCOR	Del_10q23.31	0.124	1
KDM6A	Del_10q23.31	0.124	1
DIP2B	Amp_13q12.13	0.124	1
ALPK2	Del_1p13.1	0.124	1
8p-Amp	Del_18p11.31	0.124	1
Amp_12p13.33	Del_1p13.1	0.124	1
APC	Del_17q24.3	0.125	1
RNF43	Amp_16q12.1	0.125	1
FAM123B	17q-Amp	0.125	1
FAM123B	1p-Del	0.125	1
MLH1	Amp_8q24.21	0.125	1
KDM6A	Del_14q31.1	0.125	1
PRKDC	1q-Amp	0.125	1
NR1H3	Amp_20q13.12	0.125	1
PTCH1	22q-Del	0.125	1
PTCH1	Del_4q22.1	0.125	1
HPS3	Amp_8q24.21	0.125	1
CYSLTR2	Amp_20q13.12	0.125	1
MAPK6	8q-Amp	0.126	1
NF1	8p-Del	0.126	1
RPTN	Amp_20q13.12	0.126	1
NLRC4	Del_1p13.1	0.126	1
ATM	Del_14q31.1	0.126	1
SOX9	Del_15q11.2	0.127	1
MAPK6	Amp_20q11.21	0.127	1
SMAD2	Del_17p12	0.127	1
IDH1	Amp_20q11.21	0.127	1
PTEN	Amp_20q12	0.127	1
Amp_19q13.11	Del_17p12	0.127	1
MLH1	Amp_13q12.13	0.128	1
FMN2	Amp_13q22.1	0.128	1
STARD3NL	20p-Amp	0.128	1
FBXW7	Amp_19q13.11	0.128	1
FBXW7	Del_9p21.3	0.128	1
FBXW7	Del_19p13.3	0.128	1
RBMX	13q-Amp	0.128	1
IDH1	Amp_13q22.1	0.128	1
RPTN	20p-Amp	0.128	1
GMPS	13q-Amp	0.128	1
PTCH1	Del_1p36.11	0.128	1
PIK3R1	Amp_11p15.5	0.128	1
SLK	Del_5q12.1	0.128	1
Amp_8p11.23	Del_15q21.1	0.128	1
TP53	L1TD1	0.129	1
TP53	FKBP9	0.129	1
TP53	MAP4K3	0.129	1
TP53	KCTD3	0.129	1
TP53	IDH2	0.129	1
PTEN	Del_1p36.11	0.129	1
PTEN	Del_15q15.2	0.129	1
PTCH1	Del_1p13.1	0.129	1
SMAD4	Del_18q22.1	0.129	1
8q-Amp	Del_7q31.1	0.129	1
ARID1A	Amp_20p11.21	0.13	1
ARID1A	Del_21q11.2	0.13	1
ASXL1	Del_3p26.1	0.13	1
GMPS	15q-Del	0.13	1
L1TD1	15q-Del	0.13	1
RLIM	Amp_8p11.21	0.13	1
MAP4K3	15q-Del	0.13	1
KCTD3	15q-Del	0.13	1
PLXNA3	15q-Del	0.13	1
RNF43	8q-Amp	0.131	1
B2M	Del_4q35.1	0.131	1
CDH1	Del_9p21.3	0.131	1
FMN2	1p-Del	0.131	1
FMN2	Del_6p25.3	0.131	1
ROS1	Del_15q15.2	0.131	1
DDX26B	Del_4q35.1	0.131	1
NF2	1q-Amp	0.132	1
NF1	Del_8p23.2	0.132	1
C11orf30	17p-Del	0.132	1
HPS3	Del_15q11.2	0.132	1
CYLD	17p-Del	0.132	1
7p-Amp	Del_22q13.32	0.132	1
7q-Amp	22q-Del	0.132	1
Amp_8p11.23	Del_21q11.2	0.132	1
Amp_11p15.5	Del_15q11.2	0.132	1
SMAD2	Del_5q22.2	0.133	1
SMAD2	Del_15q22.33	0.133	1
MPHOSPH10	7q-Amp	0.133	1
SETD2	Del_1p13.1	0.133	1
ALPK2	Amp_19q13.11	0.133	1
ALPK2	Del_9p21.3	0.133	1
ALPK2	Del_19p13.3	0.133	1
PTCH1	7p-Amp	0.133	1
SLC26A8	Del_5q22.2	0.133	1
SLC26A8	Del_15q22.33	0.133	1
Amp_19q13.11	Del_5q22.2	0.133	1
Amp_19q13.11	Del_15q22.33	0.133	1
Del_9p21.3	Del_15q22.33	0.133	1
FAM123B	Del_18q12.2	0.134	1
NTAN1	7q-Amp	0.134	1
KDM6A	4q-Del	0.134	1
P2RY13	18p-Del	0.134	1
NR1H3	18p-Del	0.134	1
RBM44	14q-Del	0.134	1
UBQLN2	7q-Amp	0.134	1
KIAA1586	7q-Amp	0.134	1
SMAD4	18q-Del	0.134	1
ACVR1B	Amp_8p11.23	0.135	1
MGA	Amp_17q12	0.135	1
C11orf30	4p-Del	0.135	1
EGR1	20p-Amp	0.135	1
PTEN	21q-Del	0.135	1
NLRC4	Amp_13q22.1	0.135	1
BCL9	21q-Del	0.135	1
BCL9	4p-Del	0.135	1
BCL9	Amp_17q12	0.135	1
CHD3	Amp_11p15.5	0.135	1
Amp_8p11.23	Del_10q23.31	0.135	1
Amp_8q24.21	Del_14q31.1	0.135	1
NF1	Amp_11p15.5	0.136	1
NF1	Del_1p33	0.136	1
FBXW7	Del_5q21.1	0.136	1
KIAA1586	Amp_20p11.23	0.136	1
IQCD	Amp_20p11.23	0.136	1
HPS3	20p-Amp	0.136	1
ARID1A	Del_19p13.3	0.137	1
NF2	Amp_13q22.1	0.137	1
OR4D10	Del_21q11.2	0.137	1
MGA	IDH1	0.137	1
MVK	Del_22q13.32	0.137	1
ATXN3L	Del_4q22.1	0.137	1
DIP2B	Amp_13q22.1	0.137	1
FBXW7	Del_15q15.2	0.137	1
MPHOSPH10	Del_5q21.1	0.137	1
GPATCH8	Del_22q13.32	0.137	1
RPTN	13q-Amp	0.137	1
ECT2	Del_5q21.1	0.137	1
GMPS	22q-Del	0.137	1
GMPS	Del_4q22.1	0.137	1
L1TD1	22q-Del	0.137	1
C14orf43	7p-Amp	0.137	1
ATP6V1B1	Del_21q11.2	0.137	1
NAA25	Del_21q11.2	0.137	1
NAA25	Del_22q13.32	0.137	1
FKBP9	22q-Del	0.137	1
FKBP9	Del_4q22.1	0.137	1
RLIM	Del_21q11.2	0.137	1
MAP4K3	22q-Del	0.137	1
MAP4K3	Del_4q22.1	0.137	1
KCTD3	22q-Del	0.137	1
KCTD3	Del_4q22.1	0.137	1
PLXNA3	22q-Del	0.137	1
12q-Amp	Del_1p13.1	0.137	1
17q-Amp	Del_22q13.32	0.137	1
MLH1	Amp_5p13.2	0.138	1
NR1H3	Del_18q22.1	0.138	1
TOP2B	Del_1p36.11	0.138	1
Amp_5p13.2	Del_1p36.11	0.138	1
TP53	BMPR2	0.139	1
MLH1	20q-Amp	0.139	1
BMPR2	8p-Del	0.139	1
ALPK2	22q-Del	0.139	1
7p-Amp	Del_16q23.1	0.139	1
Amp_8q24.21	Del_16q23.1	0.139	1
ARID1A	18p-Del	0.14	1
TXNDC2	Del_5q12.1	0.14	1
SETD2	Del_9p21.3	0.14	1
SETD2	Del_19p13.3	0.14	1
ATM	Del_1p33	0.14	1
SETD2	8q-Amp	0.141	1
CDH1	Amp_5p13.2	0.142	1
NF1	Del_18q22.1	0.142	1
SMAD2	Del_8p22	0.142	1
EGR1	13q-Amp	0.142	1
RB1	Del_22q13.32	0.142	1
PRPS1	18p-Del	0.142	1
Amp_19q13.11	Del_8p22	0.142	1
APC	BCOR	0.143	1
FAM123B	14q-Del	0.143	1
ACVR1B	Del_14q31.1	0.143	1
MLH1	Del_4q22.1	0.143	1
RHOA	Del_18q21.2	0.143	1
PTEN	Del_5q21.1	0.143	1
ATP6V1B1	Amp_20p11.23	0.143	1
RLIM	Amp_20p11.23	0.143	1
1p-Del	Amp_20p11.23	0.143	1
RNF43	OR4D10	0.144	1
RNF43	17q-Amp	0.144	1
RNF43	1p-Del	0.144	1
CRIPAK	18p-Del	0.144	1
FMN2	Amp_17q24.1	0.144	1
PRKDC	THOC7	0.144	1
PRKDC	Del_12p13.2	0.144	1
P2RY13	Del_18p11.31	0.144	1
NR1H3	Del_18p11.31	0.144	1
ROS1	Amp_17q24.1	0.144	1
PTCH1	Amp_13q22.1	0.144	1
FKBP9	Del_8p23.2	0.144	1
Amp_19q13.11	Del_18q12.2	0.144	1
SOX9	Del_17q24.3	0.145	1
ACVR1B	4q-Del	0.145	1
MLH1	Del_6q26	0.145	1
NF2	Del_8p23.2	0.145	1
ALG12	Del_18q12.2	0.145	1
RB1	Del_10q25.2	0.145	1
C15orf52	Del_1p36.11	0.145	1
C15orf52	Del_15q15.2	0.145	1
SOX9	Amp_17q12	0.146	1
BCOR	Amp_17q24.1	0.146	1
CDH1	14q-Del	0.146	1
BMPR2	1q-Amp	0.146	1
RLIM	Amp_20p11.21	0.146	1
1p-Del	Amp_20p11.21	0.146	1
FAM123B	18q-Del	0.147	1
PRKDC	IDH1	0.147	1
PRKDC	Del_17q24.3	0.147	1
MGA	7p-Amp	0.147	1
ASXL1	Del_9p21.3	0.147	1
SMAD2	15q-Del	0.147	1
SETD2	Amp_11p15.5	0.147	1
ALPK2	Del_15q11.2	0.147	1
SLC26A8	15q-Del	0.147	1
15q-Del	Amp_19q13.11	0.147	1
15q-Del	Del_9p21.3	0.147	1
DIP2B	13q-Amp	0.148	1
PLAGL2	17p-Del	0.148	1
RPTN	Del_18q12.2	0.148	1
HPS3	13q-Amp	0.148	1
12q-Amp	Del_1p33	0.148	1
APC	12q-Amp	0.149	1
NTAN1	Del_14q31.1	0.149	1
TPRKB	Del_14q31.1	0.149	1
CTNNB1	Amp_20q11.21	0.149	1
UBQLN2	Del_14q31.1	0.149	1
RB1	Del_15q22.33	0.149	1
KIAA1586	Del_14q31.1	0.149	1
BCL9	Del_15q21.1	0.149	1
IQCD	Del_14q31.1	0.149	1
HPS3	Amp_17q12	0.149	1
PRPS1	Del_18p11.31	0.149	1
Amp_8p11.23	Del_15q11.2	0.149	1
ARID1A	15q-Del	0.15	1
TP53	DIP2B	0.15	1
KDM6A	Del_15q11.2	0.15	1
OR4D10	Del_4q35.1	0.15	1
MVK	Del_4q35.1	0.15	1
ATXN3L	18q-Del	0.15	1
RBMX	Amp_20p11.21	0.15	1
ASXL1	14q-Del	0.15	1
TPRKB	Del_18q12.2	0.15	1
CTNNB1	17p-Del	0.15	1
TOP2B	Del_1p13.1	0.15	1
KIAA1586	Del_18q12.2	0.15	1
IQCD	Del_18q12.2	0.15	1
PLEKHF2	Del_18q12.2	0.15	1
CYLD	18p-Del	0.15	1
TXNDC2	8q-Amp	0.151	1
B2M	Del_5q22.2	0.151	1
B2M	Del_15q22.33	0.151	1
BMPR2	Del_22q13.32	0.151	1
STARD3NL	Del_8p23.2	0.151	1
P2RY13	Del_15q22.33	0.151	1
NR1H3	Del_5q22.2	0.151	1
NR1H3	Del_15q22.33	0.151	1
SETD2	22q-Del	0.151	1
DDX26B	Del_15q22.33	0.151	1
HPS3	18q-Del	0.151	1
CYSLTR2	Amp_12p13.33	0.151	1
TMEM126A	20q-Amp	0.151	1
8q-Amp	Del_6q26	0.151	1
RHOA	Del_18q22.1	0.152	1
PRKDC	22q-Del	0.152	1
PRKDC	Del_4q22.1	0.152	1
SLK	20p-Amp	0.152	1
ARID1A	Del_1p33	0.153	1
MGA	Del_3p26.1	0.153	1
MGA	Del_10q21.1	0.153	1
RB1	14q-Del	0.153	1
GMPS	Del_5q21.1	0.153	1
L1TD1	Del_5q21.1	0.153	1
NLRC4	Del_21q11.2	0.153	1
PTCH1	Del_22q13.32	0.153	1
PIK3R1	20q-Amp	0.153	1
CHD3	Del_21q11.2	0.153	1
CHD3	Del_22q13.32	0.153	1
KCTD3	Del_5q21.1	0.153	1
APC	ZBTB20	0.154	1
MLH1	Del_14q31.1	0.154	1
NTAN1	8p-Del	0.154	1
NF1	4p-Del	0.154	1
C11orf30	Del_5q12.1	0.154	1
UBQLN2	8p-Del	0.154	1
KIAA1586	8p-Del	0.154	1
L1TD1	8q-Amp	0.154	1
C14orf43	Del_14q31.1	0.154	1
BCL9	Del_5q12.1	0.154	1
PLEKHF2	8p-Del	0.154	1
FKBP9	8q-Amp	0.154	1
GRB2	Del_8p23.2	0.154	1
PRKDC	21q-Del	0.155	1
TOP2B	14q-Del	0.155	1
SLC26A8	22q-Del	0.155	1
FMN2	14q-Del	0.156	1
SLK	Amp_20q12	0.156	1
RBMX	7q-Amp	0.157	1
GMPS	7q-Amp	0.157	1
NLRC4	Amp_8p11.21	0.157	1
C2orf29	Del_18q21.2	0.157	1
BCL9	Del_1p36.11	0.157	1
BCL9	Del_15q15.2	0.157	1
CHD3	Del_10q23.31	0.157	1
CYLD	Del_1p36.11	0.157	1
KCTD3	7q-Amp	0.157	1
BCORL1	Del_10q23.31	0.157	1
C15orf52	14q-Del	0.157	1
SLK	Amp_13q12.13	0.157	1
7q-Amp	Del_10q21.1	0.157	1
TP53	Amp_12p13.33	0.158	1
FMN2	Del_15q22.33	0.158	1
NF2	20p-Amp	0.158	1
GRB2	Del_18q21.2	0.158	1
STARD3NL	Del_21q11.2	0.159	1
ALPK2	Del_8p22	0.159	1
ROS1	Del_8p23.2	0.159	1
RPTN	Amp_20q12	0.159	1
PTEN	Del_18p11.31	0.159	1
RBM44	Del_22q13.32	0.159	1
Amp_8p11.21	Del_7q31.1	0.159	1
SOX9	18p-Del	0.16	1
FAM123B	4p-Del	0.16	1
BCOR	7p-Amp	0.16	1
KDM6A	7p-Amp	0.16	1
RPTN	Amp_8p11.21	0.16	1
CTNNB1	Amp_20q12	0.16	1
RBM44	Amp_8p11.21	0.16	1
CYSLTR2	Amp_20q12	0.16	1
C15orf52	Amp_8q24.21	0.16	1
Amp_8q24.21	Del_6q26	0.16	1
TP53	RBM44	0.161	1
SOX9	RBMX	0.161	1
SOX9	KCTD3	0.161	1
SOX9	Del_10q21.1	0.161	1
SOX9	Del_16p13.3	0.161	1
CRIPAK	8p-Del	0.161	1
NF1	Amp_13q22.1	0.161	1
FBXW7	NR1H3	0.161	1
C14orf43	8p-Del	0.161	1
8q-Amp	Del_14q31.1	0.161	1
Amp_5p13.2	Del_1p33	0.161	1
BCOR	8p-Amp	0.162	1
BMPR2	Amp_16p11.2	0.162	1
BMPR2	Del_17q24.3	0.162	1
KDM6A	8p-Amp	0.162	1
NF1	Del_6q26	0.162	1
MGA	Del_5q12.1	0.162	1
SMAD4	20q-Amp	0.162	1
CYLD	Del_18p11.31	0.163	1
SOX9	20p-Amp	0.164	1
PRKDC	Del_4q35.1	0.164	1
SMAD2	13q-Amp	0.164	1
ZBTB20	4p-Del	0.164	1
ZBTB20	Amp_17q12	0.164	1
PIK3R1	1p-Del	0.164	1
BCL9	Del_1p13.1	0.164	1
ACVR1B	20p-Amp	0.165	1
NTAN1	Del_15q11.2	0.165	1
NF2	21q-Del	0.165	1
NF2	Del_3p14.2	0.165	1
SETD2	Del_8p23.2	0.165	1
UBQLN2	Del_15q11.2	0.165	1
TOP2B	7p-Amp	0.165	1
KIAA1586	Del_15q11.2	0.165	1
ATG5	Del_17p12	0.165	1
ARID1A	GGT1	0.166	1
B2M	15q-Del	0.166	1
MGA	Del_5q22.2	0.166	1
P2RY13	ASXL1	0.166	1
P2RY13	15q-Del	0.166	1
P2RY13	Del_17p12	0.166	1
NR1H3	15q-Del	0.166	1
SETD2	17p-Del	0.166	1
DDX26B	15q-Del	0.166	1
PTCH1	Del_5q21.1	0.166	1
CYSLTR2	15q-Del	0.166	1
GRB2	Del_18q22.1	0.166	1
SLK	13q-Amp	0.166	1
13q-Amp	Del_16q23.1	0.166	1
Amp_12p13.33	Del_5q21.1	0.166	1
MGA	7q-Amp	0.167	1
RBMX	7p-Amp	0.167	1
RB1	Del_3q26.31	0.167	1
RB1	Del_6q26	0.167	1
GMPS	7p-Amp	0.167	1
C2orf29	Amp_13q22.1	0.167	1
KCTD3	7p-Amp	0.167	1
IDH2	7p-Amp	0.167	1
ACVR1B	Del_5q22.2	0.168	1
RBMX	Del_18q22.1	0.168	1
C2orf29	Del_18q22.1	0.168	1
IDH2	Del_18q22.1	0.168	1
PTEN	18p-Del	0.169	1
NLRC4	4q-Del	0.169	1
CHD3	4q-Del	0.169	1
ATM	Amp_17q24.1	0.169	1
FAM123B	Del_3q26.31	0.17	1
ACVR1B	8q-Amp	0.17	1
RB1	13q-Amp	0.17	1
SLK	Del_10q23.31	0.17	1
12q-Amp	Del_10q23.31	0.17	1
MLH1	5q-Del	0.171	1
BMPR2	4p-Del	0.171	1
BMPR2	Del_3p14.2	0.171	1
NF2	Del_17p12	0.171	1
PRKDC	Del_3p26.1	0.171	1
PRKDC	Del_16p13.3	0.171	1
MGA	Del_19p13.3	0.171	1
DIP2B	Del_8p23.2	0.171	1
SMAD2	Del_5q21.1	0.171	1
ALPK2	Del_22q13.32	0.171	1
L1TD1	Amp_8p11.23	0.171	1
PTCH1	Del_8p23.2	0.171	1
SLC26A8	Del_5q21.1	0.171	1
KCTD3	Amp_8p11.23	0.171	1
Amp_8p11.23	Del_10q21.1	0.171	1
Amp_19q13.11	Del_5q21.1	0.171	1
KDM6A	Amp_5p13.2	0.172	1
FMN2	4p-Del	0.172	1
FMN2	Amp_17q12	0.172	1
NF2	Amp_20p11.21	0.172	1
NF1	Del_4q35.1	0.172	1
OR4D10	Del_5q22.2	0.172	1
MVK	Del_5q22.2	0.172	1
MVK	Del_15q22.33	0.172	1
GPATCH8	Del_15q22.33	0.172	1
ALPK2	17q-Amp	0.172	1
ROS1	4p-Del	0.172	1
PTCH1	21q-Del	0.172	1
PTCH1	Del_3p14.2	0.172	1
ATP6V1B1	Del_15q22.33	0.172	1
NAA25	Del_15q22.33	0.172	1
RLIM	Del_15q22.33	0.172	1
SLK	Del_22q13.32	0.172	1
1p-Del	Amp_12p13.33	0.172	1
NF1	Del_18q21.2	0.173	1
DIP2B	Del_18p11.31	0.173	1
C11orf30	Amp_20p11.23	0.173	1
RPTN	Del_4q35.1	0.173	1
CYLD	Amp_20p11.23	0.173	1
14q-Del	Amp_8q24.21	0.173	1
B2M	22q-Del	0.174	1
MLH1	Del_4q35.1	0.174	1
NR1H3	Del_4q22.1	0.174	1
DDX26B	Del_4q22.1	0.174	1
CYSLTR2	Del_4q22.1	0.174	1
MLH1	Amp_20q13.12	0.175	1
C11orf30	14q-Del	0.175	1
C11orf30	Del_1p33	0.175	1
BCL9	14q-Del	0.175	1
BCL9	Amp_11p15.5	0.175	1
BCL9	Del_1p33	0.175	1
CYLD	Amp_11p15.5	0.175	1
MAPK6	Amp_8p11.21	0.176	1
RHOA	FMN2	0.176	1
FMN2	Amp_6p21.1	0.176	1
FMN2	Del_6q26	0.176	1
SMAD2	SMAD4	0.176	1
IDH1	Del_15q11.2	0.176	1
ROS1	Del_6q26	0.176	1
ROS1	Del_8q11.1	0.176	1
C14orf43	Del_15q11.2	0.176	1
SMAD4	Del_9p21.3	0.176	1
SMAD4	Del_19p13.3	0.176	1
CRIPAK	Amp_20q13.12	0.177	1
PRKDC	Amp_17q24.1	0.177	1
CTNNB1	Del_15q21.1	0.177	1
PTCH1	Amp_13q12.13	0.177	1
CHD3	Amp_8p11.23	0.177	1
ATM	14q-Del	0.177	1
CYSLTR2	20q-Amp	0.177	1
ATG5	Del_8p22	0.177	1
TP53	MPHOSPH10	0.178	1
TP53	C14orf43	0.178	1
WNT1	Amp_20p11.21	0.178	1
NF2	Del_3p26.1	0.178	1
NF1	18q-Del	0.178	1
OR4D10	18p-Del	0.178	1
OR4D10	Del_18q21.2	0.178	1
RBMX	Del_14q31.1	0.178	1
ALG12	18q-Del	0.178	1
C2orf29	Del_14q31.1	0.178	1
FKBP9	Del_14q31.1	0.178	1
B2M	17p-Del	0.179	1
P2RY13	17p-Del	0.179	1
NR1H3	17p-Del	0.179	1
SETD2	Del_5q21.1	0.179	1
ROS1	Amp_8p11.21	0.179	1
PTEN	Amp_20q13.12	0.179	1
SOX9	SMAD2	0.18	1
SOX9	Del_15q21.1	0.18	1
BMPR2	Del_3p26.1	0.18	1
BMPR2	Del_10q21.1	0.18	1
OR4D10	8p-Amp	0.18	1
RPTN	Amp_20q11.21	0.18	1
ECT2	Del_17p12	0.18	1
L1TD1	Amp_20p11.23	0.18	1
DCLK2	Amp_20q11.21	0.18	1
BCL9	8q-Amp	0.18	1
NAA25	8p-Amp	0.18	1
RLIM	8p-Amp	0.18	1
8p-Amp	1p-Del	0.18	1
NTAN1	FBXW7	0.181	1
CRIPAK	Amp_17q12	0.181	1
CRIPAK	Del_18q12.2	0.181	1
KDM6A	Amp_20q11.21	0.181	1
MAPK6	4p-Del	0.181	1
MAPK6	Amp_17q12	0.181	1
FBXW7	Del_12p13.2	0.181	1
MPHOSPH10	21q-Del	0.181	1
MPHOSPH10	4p-Del	0.181	1
MPHOSPH10	Amp_17q12	0.181	1
IDH1	4p-Del	0.181	1
EGR1	Amp_20p11.23	0.181	1
EGR1	Del_14q31.1	0.181	1
ROS1	8q-Amp	0.181	1
ECT2	Amp_17q12	0.181	1
ECT2	Del_3p14.2	0.181	1
ALDH1A3	4p-Del	0.181	1
ALDH1A3	Amp_17q12	0.181	1
C14orf43	Amp_17q12	0.181	1
GRB2	Del_14q31.1	0.181	1
SMAD4	Amp_20q11.21	0.181	1
RNF43	Del_10q25.2	0.182	1
FMN2	Amp_5p13.2	0.182	1
FBXW7	Del_21q11.2	0.182	1
SMAD2	Del_8p23.2	0.182	1
CTNNB1	ATP6V1B1	0.182	1
RB1	Amp_8p11.23	0.182	1
NLRC4	Amp_17q24.1	0.182	1
CHD3	Amp_17q24.1	0.182	1
BCORL1	Amp_17q24.1	0.182	1
7q-Amp	Del_16q23.1	0.182	1
RHOA	Del_21q11.2	0.183	1
NF1	15q-Del	0.183	1
ASXL1	7p-Amp	0.183	1
NR1H3	Amp_8q24.21	0.183	1
RPTN	Amp_20p11.23	0.183	1
DCLK2	Amp_20p11.23	0.183	1
SLC26A8	7q-Amp	0.183	1
CYSLTR2	Amp_20q11.21	0.183	1
C15orf52	Del_22q13.32	0.183	1
TXNDC2	Del_10q23.31	0.184	1
NF2	Amp_13q12.13	0.184	1
RB1	Del_15q21.1	0.184	1
SLK	Amp_20q11.21	0.184	1
Amp_5p13.2	Del_10q23.31	0.184	1
BCOR	Del_4q22.1	0.185	1
KDM6A	Del_4q22.1	0.185	1
PRKDC	Amp_8q24.21	0.185	1
Amp_8p11.21	Del_14q31.1	0.185	1
SOX9	7q-Amp	0.186	1
FAM123B	Del_18q22.1	0.186	1
ATXN3L	18p-Del	0.186	1
EGR1	8p-Del	0.186	1
GMPS	8p-Del	0.186	1
L1TD1	8p-Del	0.186	1
NLRC4	Del_14q31.1	0.186	1
C2orf29	18p-Del	0.186	1
ATG5	20p-Amp	0.186	1
BCORL1	Del_14q31.1	0.186	1
GRB2	8p-Del	0.186	1
PLXNA3	8p-Del	0.186	1
FMN2	Amp_13q12.13	0.187	1
PTCH1	Del_15q11.2	0.187	1
CDH1	1p-Del	0.188	1
MVK	15q-Del	0.188	1
ASXL1	17q-Amp	0.188	1
GPATCH8	15q-Del	0.188	1
ATP6V1B1	15q-Del	0.188	1
NAA25	15q-Del	0.188	1
RLIM	15q-Del	0.188	1
7p-Amp	Del_10q23.31	0.188	1
15q-Del	1p-Del	0.188	1
Del_8p23.2	Del_16q23.1	0.188	1
FMN2	15q-Del	0.189	1
OR4D10	Del_18p11.31	0.189	1
PRKDC	Del_5q21.1	0.19	1
ALG12	Amp_13q22.1	0.19	1
TOP2B	Amp_20p11.21	0.19	1
HPS3	18p-Del	0.19	1
ARID1A	Amp_8q24.21	0.191	1
RNF43	Del_6q26	0.191	1
TP53	Amp_11p15.5	0.191	1
FMN2	20p-Amp	0.191	1
OR4D10	Amp_20q13.12	0.191	1
ASXL1	17p-Del	0.191	1
TPRKB	18q-Del	0.191	1
THOC7	Amp_20p11.21	0.191	1
KIAA1586	18q-Del	0.191	1
LINGO4	Amp_20p11.21	0.191	1
IQCD	18q-Del	0.191	1
PLEKHF2	18q-Del	0.191	1
HPS3	Amp_11p15.5	0.191	1
HPS3	Del_1p33	0.191	1
RLIM	Amp_20q13.12	0.191	1
Amp_20q13.12	Del_6p25.3	0.191	1
SOX9	Del_15q15.2	0.192	1
B2M	Del_5q21.1	0.192	1
MLH1	Amp_20p11.21	0.192	1
NR1H3	Del_5q21.1	0.192	1
DDX26B	Del_5q21.1	0.192	1
TOP2B	Del_22q13.32	0.192	1
CYSLTR2	Del_18q12.2	0.192	1
12q-Amp	Del_4q35.1	0.192	1
NTAN1	Del_15q21.1	0.194	1
TPRKB	Del_15q21.1	0.194	1
UBQLN2	Del_15q21.1	0.194	1
RB1	15q-Del	0.194	1
KIAA1586	Del_15q21.1	0.194	1
PIK3R1	Amp_17q24.1	0.194	1
Amp_8q24.21	Del_1p33	0.194	1
SOX9	8p-Amp	0.195	1
STARD3NL	Amp_12p13.33	0.195	1
STARD3NL	Del_15q22.33	0.195	1
RPTN	18q-Del	0.195	1
RBM44	Del_5q22.2	0.195	1
RBM44	Del_15q22.33	0.195	1
DCLK2	Del_5q22.2	0.195	1
PIK3R1	8q-Amp	0.195	1
ATM	7q-Amp	0.195	1
ARID1A	Amp_17q12	0.196	1
RHOA	Amp_8p11.21	0.196	1
SMAD2	Amp_20p11.21	0.196	1
ZBTB20	Del_1p13.1	0.196	1
KIAA1586	Amp_13q12.13	0.196	1
PTCH1	Del_4q35.1	0.196	1
LINGO4	Amp_13q12.13	0.196	1
CHD3	Del_10q25.2	0.196	1
PLEKHF2	Amp_13q12.13	0.196	1
BCORL1	12q-Amp	0.196	1
BCORL1	Del_10q25.2	0.196	1
C15orf52	Amp_8p11.21	0.196	1
SLK	Amp_17q24.1	0.196	1
FAM123B	16p-Amp	0.197	1
FAM123B	5q-Del	0.197	1
OR4D10	Del_4q22.1	0.197	1
MVK	22q-Del	0.197	1
MVK	Del_4q22.1	0.197	1
GPATCH8	22q-Del	0.197	1
GPATCH8	Del_4q22.1	0.197	1
SETD2	4q-Del	0.197	1
CTNNB1	Amp_20q13.12	0.197	1
TOP2B	4q-Del	0.197	1
KIAA1586	17p-Del	0.197	1
PTCH1	Del_8p22	0.197	1
ATP6V1B1	22q-Del	0.197	1
ATP6V1B1	Del_4q22.1	0.197	1
NAA25	22q-Del	0.197	1
PCBP1	17p-Del	0.197	1
17q-Amp	22q-Del	0.197	1
17q-Amp	Del_4q22.1	0.197	1
8p-Amp	4q-Del	0.197	1
C15orf52	Del_4q35.1	0.198	1
Amp_6p21.1	Del_4q35.1	0.198	1
APC	C15orf52	0.199	1
APC	Amp_6p21.1	0.199	1
CDH1	Del_15q11.2	0.199	1
BMPR2	Del_9p21.3	0.199	1
BMPR2	Del_19p13.3	0.199	1
CTNNB1	Del_7q31.1	0.199	1
NLRC4	Amp_20p11.23	0.199	1
C2orf29	Del_18p11.31	0.199	1
SLC26A8	Amp_8p11.23	0.199	1
TP53	SMAD2	0.2	1
TP53	Amp_19q13.11	0.2	1
CRIPAK	Del_8p22	0.2	1
MAPK6	Amp_8q24.21	0.2	1
ATXN3L	4p-Del	0.2	1
ATXN3L	Amp_17q12	0.2	1
ATXN3L	Del_3p14.2	0.2	1
FBXW7	17q-Amp	0.2	1
RBMX	21q-Del	0.2	1
RBMX	Amp_17q12	0.2	1
IDH1	Amp_8q24.21	0.2	1
C11orf30	Del_10q23.31	0.2	1
GMPS	21q-Del	0.2	1
GMPS	4p-Del	0.2	1
L1TD1	4p-Del	0.2	1
C2orf29	4p-Del	0.2	1
C2orf29	Amp_17q12	0.2	1
FKBP9	21q-Del	0.2	1
FKBP9	Amp_17q12	0.2	1
MAP4K3	21q-Del	0.2	1
MAP4K3	Amp_17q12	0.2	1
KCTD3	4p-Del	0.2	1
KCTD3	Amp_17q12	0.2	1
PLXNA3	4p-Del	0.2	1
PLXNA3	Amp_17q12	0.2	1
Amp_17q12	Del_16p13.3	0.2	1
SOX9	CYSLTR2	0.201	1
CDH1	Del_5q21.1	0.201	1
NTAN1	Del_1p36.11	0.201	1
NTAN1	Del_15q15.2	0.201	1
BMPR2	Del_5q12.1	0.201	1
NF1	SMAD2	0.201	1
NF1	Del_19p13.3	0.201	1
FBXW7	Del_15q21.1	0.201	1
TPRKB	Del_1p36.11	0.201	1
TPRKB	Del_15q15.2	0.201	1
THOC7	Del_1p36.11	0.201	1
UBQLN2	Del_1p36.11	0.201	1
UBQLN2	Del_15q15.2	0.201	1
KIAA1586	Del_1p36.11	0.201	1
KIAA1586	Del_15q15.2	0.201	1
LINGO4	Del_1p36.11	0.201	1
PIK3R1	Amp_8p11.23	0.201	1
SLC26A8	7p-Amp	0.201	1
IQCD	Del_1p36.11	0.201	1
Amp_8p11.23	Del_10q25.2	0.201	1
Amp_8p11.23	Del_16q23.1	0.201	1
Amp_8p11.21	Del_21q11.2	0.201	1
RNF43	Amp_5p13.2	0.202	1
SOX9	Amp_20p11.21	0.202	1
FAM123B	Amp_20p11.23	0.202	1
SMAD2	Amp_13q12.13	0.202	1
ATG5	7q-Amp	0.202	1
KCTD3	Del_15q11.2	0.202	1
Del_15q11.2	Del_16p13.3	0.202	1
SOX9	SMAD4	0.203	1
ACVR1B	22q-Del	0.203	1
MLH1	1q-Amp	0.203	1
MLH1	14q-Del	0.203	1
ASXL1	Del_21q11.2	0.203	1
ALG12	18p-Del	0.203	1
ZBTB20	Del_15q15.2	0.203	1
MPHOSPH10	Del_5q12.1	0.203	1
IDH1	Del_5q12.1	0.203	1
ALDH1A3	Del_5q12.1	0.203	1
C14orf43	Del_5q12.1	0.203	1
IQCD	Amp_20q13.12	0.203	1
PLEKHF2	Amp_20q13.12	0.203	1
PCBP1	Amp_20q13.12	0.203	1
12q-Amp	Del_18q12.2	0.203	1
Amp_6p21.1	Del_18q12.2	0.203	1
Del_16q23.1	Del_18q12.2	0.203	1
FMN2	5q-Del	0.204	1
ROS1	16p-Amp	0.204	1
ROS1	5q-Del	0.204	1
PIK3R1	Del_8p23.2	0.204	1
GGT1	SMAD4	0.204	1
SLK	17p-Del	0.204	1
17p-Del	Del_16q23.1	0.204	1
PTEN	Del_18q22.1	0.205	1
NLRC4	Del_5q22.2	0.205	1
CHD3	Amp_12p13.33	0.205	1
CHD3	Del_15q22.33	0.205	1
ATM	Del_1p36.11	0.205	1
SMAD4	Del_18q21.2	0.205	1
FMN2	22q-Del	0.206	1
TPRKB	Amp_13q22.1	0.206	1
ROS1	22q-Del	0.206	1
RB1	Del_15q15.2	0.206	1
KIAA1586	Amp_13q22.1	0.206	1
LINGO4	Amp_13q22.1	0.206	1
SELPLG	Del_14q31.1	0.207	1
NF2	SMAD2	0.207	1
NF2	Amp_19q13.11	0.207	1
NF2	Del_9p21.3	0.207	1
SMAD2	Del_14q31.1	0.207	1
RB1	5q-Del	0.207	1
SLC26A8	Del_14q31.1	0.207	1
Amp_19q13.11	Del_14q31.1	0.207	1
NF2	Del_5q12.1	0.208	1
P2RY13	13q-Amp	0.208	1
NR1H3	13q-Amp	0.208	1
ZBTB20	Amp_11p15.5	0.208	1
TOP2B	7q-Amp	0.208	1
ATM	Del_21q11.2	0.208	1
TP53	C11orf30	0.209	1
FAM123B	Amp_8p11.23	0.209	1
RB1	Del_19p13.3	0.209	1
ATG5	Del_8p23.2	0.209	1
SOX9	ASXL1	0.21	1
BCOR	Del_5q21.1	0.21	1
NF1	18p-Del	0.21	1
FBXW7	Del_17q24.3	0.21	1
FKBP9	Amp_8p11.21	0.21	1
IDH2	Amp_8p11.21	0.21	1
SLK	Del_10q25.2	0.21	1
Amp_8p11.21	Del_10q21.1	0.21	1
TP53	SETD2	0.211	1
TXNDC2	Amp_17q24.1	0.211	1
BCOR	17p-Del	0.211	1
NF2	Del_10q25.2	0.211	1
ALG12	Del_18p11.31	0.211	1
TOP2B	Amp_17q24.1	0.211	1
CHD3	Amp_5p13.2	0.211	1
HPS3	Amp_20p11.23	0.211	1
SMAD4	Del_14q31.1	0.211	1
Amp_19q13.11	Del_18q21.2	0.211	1
CDH1	Del_1p36.11	0.212	1
STARD3NL	15q-Del	0.212	1
NF2	Amp_8q24.21	0.212	1
FBXW7	7q-Amp	0.212	1
ALPK2	Del_15q21.1	0.212	1
RBM44	15q-Del	0.212	1
8q-Amp	14q-Del	0.212	1
ARID1A	Del_5q21.1	0.213	1
C11orf30	4q-Del	0.213	1
TOP2B	Del_4q35.1	0.213	1
DCLK2	Amp_13q22.1	0.213	1
BCL9	4q-Del	0.213	1
HPS3	8q-Amp	0.213	1
CYLD	4q-Del	0.213	1
4p-Del	Amp_8p11.21	0.213	1
FAM123B	18p-Del	0.214	1
MAPK6	Del_1p13.1	0.214	1
P2RY13	7q-Amp	0.214	1
NR1H3	7q-Amp	0.214	1
MPHOSPH10	Del_1p13.1	0.214	1
C11orf30	Del_22q13.32	0.214	1
ECT2	Del_1p13.1	0.214	1
TOP2B	Amp_8p11.21	0.214	1
C14orf43	Del_1p13.1	0.214	1
PIK3R1	Amp_6p21.1	0.214	1
PIK3R1	Del_8q11.1	0.214	1
CYLD	Del_22q13.32	0.214	1
BCOR	Amp_8p11.21	0.215	1
NTAN1	14q-Del	0.215	1
BMPR2	Amp_12p13.33	0.215	1
BMPR2	Del_5q22.2	0.215	1
CRIPAK	20p-Amp	0.215	1
MAPK6	20p-Amp	0.215	1
OR4D10	Del_5q21.1	0.215	1
MGA	1p-Del	0.215	1
MVK	Del_5q21.1	0.215	1
FBXW7	Amp_5p13.2	0.215	1
TPRKB	14q-Del	0.215	1
GPATCH8	Del_5q21.1	0.215	1
UBQLN2	14q-Del	0.215	1
ALDH1A3	20p-Amp	0.215	1
KIAA1586	14q-Del	0.215	1
ATP6V1B1	Del_5q21.1	0.215	1
IQCD	14q-Del	0.215	1
ACVR1B	HPS3	0.216	1
SMAD2	PTCH1	0.216	1
NLRC4	Del_15q11.2	0.216	1
PTCH1	Del_19p13.3	0.216	1
HPS3	Del_10q23.31	0.216	1
ARID1A	8q-Amp	0.217	1
BMPR2	Del_1p13.1	0.217	1
SETD2	Amp_17q24.1	0.217	1
ROS1	Del_22q13.32	0.217	1
8p-Amp	Del_4q35.1	0.217	1
NF1	4q-Del	0.218	1
PTEN	Amp_20q11.21	0.218	1
RNF43	16p-Amp	0.219	1
RNF43	5q-Del	0.219	1
NF2	Amp_17p11.2	0.219	1
MPHOSPH10	Del_15q21.1	0.219	1
IDH1	Del_15q21.1	0.219	1
C14orf43	Del_15q21.1	0.219	1
PRPS1	Del_14q31.1	0.219	1
7q-Amp	Del_22q13.32	0.219	1
SOX9	14q-Del	0.22	1
BCOR	1q-Amp	0.22	1
NF2	Del_14q31.1	0.22	1
OR4D10	17p-Del	0.22	1
ASXL1	Amp_8q24.21	0.22	1
SMAD2	21q-Del	0.22	1
RB1	22q-Del	0.22	1
SLC26A8	4p-Del	0.22	1
RLIM	17p-Del	0.22	1
17q-Amp	17p-Del	0.22	1
BMPR2	Amp_16q12.1	0.221	1
RBM44	22q-Del	0.221	1
12q-Amp	8p-Del	0.221	1
RHOA	Del_5q22.2	0.222	1
RBMX	Del_5q12.1	0.222	1
SMAD2	Amp_20p11.23	0.222	1
ALPK2	Del_6q26	0.222	1
GMPS	Del_5q12.1	0.222	1
L1TD1	Del_5q12.1	0.222	1
IQCD	18p-Del	0.222	1
FKBP9	Del_5q12.1	0.222	1
MAP4K3	Del_5q12.1	0.222	1
KCTD3	Del_5q12.1	0.222	1
IDH2	Del_5q12.1	0.222	1
C15orf52	Del_15q22.33	0.222	1
Amp_12p13.33	Del_8q11.1	0.222	1
Del_5q22.2	Del_8q11.1	0.222	1
SOX9	1p-Del	0.224	1
CDH1	1q-Amp	0.224	1
SMAD4	Amp_12p13.33	0.224	1
NLRC4	Del_8p22	0.225	1
SMAD4	Amp_17q12	0.225	1
TP53	ZFP36L2	0.226	1
TXNDC2	12q-Amp	0.226	1
CRIPAK	Amp_11p15.5	0.226	1
MAPK6	Amp_11p15.5	0.226	1
MAPK6	Del_1p33	0.226	1
MPHOSPH10	Del_1p33	0.226	1
ECT2	Amp_11p15.5	0.226	1
ECT2	Del_1p33	0.226	1
ALDH1A3	Amp_11p15.5	0.226	1
C14orf43	Amp_11p15.5	0.226	1
C14orf43	Del_1p33	0.226	1
SLK	Amp_5p13.2	0.226	1
SLK	Del_15q22.33	0.226	1
12q-Amp	Del_5q22.2	0.226	1
Amp_5p13.2	Del_10q25.2	0.226	1
Amp_11p15.5	Amp_16p11.2	0.226	1
ARID1A	Del_15q15.2	0.227	1
B2M	8q-Amp	0.227	1
ATXN3L	Del_17p12	0.227	1
BCL9	Amp_17q24.1	0.227	1
IDH2	Del_17p12	0.227	1
MLH1	Amp_20q11.21	0.228	1
ALPK2	Del_1p36.11	0.228	1
ALPK2	Del_15q15.2	0.228	1
CYSLTR2	Del_8p23.2	0.228	1
ARID1A	4q-Del	0.229	1
FAM123B	Del_12p13.2	0.229	1
ACVR1B	Del_5q21.1	0.229	1
MAPK6	Del_1p36.11	0.229	1
FMN2	Amp_8p11.23	0.229	1
MPHOSPH10	Del_15q15.2	0.229	1
IDH1	Del_1p36.11	0.229	1
IDH1	Del_15q15.2	0.229	1
ROS1	Amp_8p11.23	0.229	1
ROS1	Del_1p13.1	0.229	1
CTNNB1	Del_14q31.1	0.229	1
ECT2	Del_1p36.11	0.229	1
ALDH1A3	Del_1p36.11	0.229	1
C14orf43	Del_1p36.11	0.229	1
C14orf43	Del_15q15.2	0.229	1
CHD3	15q-Del	0.229	1
Amp_16p11.2	Del_1p36.11	0.229	1
B2M	Amp_8p11.23	0.23	1
IDH1	13q-Amp	0.23	1
DDX26B	Amp_8p11.23	0.23	1
CYLD	20p-Amp	0.23	1
GRB2	Del_15q21.1	0.23	1
SETD2	Amp_8p11.21	0.231	1
8p-Amp	Del_6q26	0.231	1
SMAD2	Del_15q11.2	0.232	1
SLC26A8	Del_15q11.2	0.232	1
8p-Amp	Del_15q21.1	0.232	1
ARID1A	Amp_20p11.23	0.233	1
GPATCH8	Amp_8q24.21	0.233	1
IQCD	Del_18p11.31	0.233	1
ATM	Del_12p13.2	0.233	1
Amp_20p11.23	Del_6q26	0.233	1
ACVR1B	ZBTB20	0.234	1
BCOR	Del_8p22	0.234	1
ATXN3L	Del_18q12.2	0.234	1
DIP2B	Del_8p22	0.234	1
ZBTB20	Del_10q23.31	0.234	1
GMPS	Del_1p13.1	0.234	1
MAP4K3	Del_1p13.1	0.234	1
KCTD3	Del_1p13.1	0.234	1
IDH2	Del_1p13.1	0.234	1
OR4D10	Amp_20q12	0.235	1
RLIM	Amp_20q12	0.235	1
Amp_20q12	Del_6p25.3	0.235	1
EGR1	Del_1p36.11	0.236	1
ROS1	Del_12p13.2	0.236	1
BCL9	Del_4q35.1	0.236	1
GRB2	Del_15q15.2	0.236	1
CDH1	Del_5q12.1	0.237	1
ASXL1	7q-Amp	0.237	1
KIAA1586	8q-Amp	0.237	1
PCBP1	8q-Amp	0.237	1
TP53	NLRC4	0.238	1
TXNDC2	Del_14q31.1	0.238	1
NF2	8p-Del	0.238	1
CTNNB1	Amp_17q24.1	0.238	1
HPS3	Del_21q11.2	0.238	1
SLK	8p-Amp	0.238	1
BCOR	Del_17q24.3	0.239	1
RHOA	Amp_20q12	0.239	1
DIP2B	IDH1	0.239	1
GGT1	Amp_20p11.23	0.239	1
Amp_20q12	Del_6q26	0.239	1
RHOA	ASXL1	0.24	1
STARD3NL	Del_5q21.1	0.24	1
CTNNB1	14q-Del	0.24	1
RBM44	Del_5q21.1	0.24	1
DCLK2	Del_5q21.1	0.24	1
C15orf52	15q-Del	0.24	1
FAM123B	8p-Del	0.241	1
TXNDC2	Amp_5p13.2	0.241	1
MGA	Del_5q21.1	0.241	1
PTEN	Del_22q13.32	0.241	1
TOP2B	17p-Del	0.241	1
B2M	4p-Del	0.242	1
B2M	Amp_17q12	0.242	1
P2RY13	7p-Amp	0.242	1
P2RY13	21q-Del	0.242	1
NR1H3	7p-Amp	0.242	1
NR1H3	4p-Del	0.242	1
NR1H3	Amp_17q12	0.242	1
C11orf30	Del_10q25.2	0.242	1
DDX26B	4p-Del	0.242	1
DDX26B	Amp_17q12	0.242	1
PTCH1	8p-Del	0.242	1
BCL9	Del_10q25.2	0.242	1
IQCD	Amp_20q12	0.242	1
PLEKHF2	Amp_20q12	0.242	1
CYLD	Del_16q23.1	0.242	1
CYSLTR2	21q-Del	0.242	1
CYSLTR2	4p-Del	0.242	1
PCBP1	Amp_20q12	0.242	1
Amp_16q12.1	Del_3p14.2	0.242	1
SMAD2	Del_5q12.1	0.243	1
NLRC4	Del_4q22.1	0.243	1
SLC26A8	Del_5q12.1	0.243	1
CHD3	Del_4q22.1	0.243	1
SLK	Del_15q11.2	0.243	1
Del_5q12.1	Del_9p21.3	0.243	1
Del_16q23.1	Del_17p12	0.243	1
NTAN1	Del_22q13.32	0.244	1
WNT1	Amp_8q24.21	0.244	1
WNT1	Del_8p22	0.244	1
TPRKB	Del_21q11.2	0.244	1
TPRKB	Del_22q13.32	0.244	1
ROS1	Del_5q21.1	0.244	1
THOC7	Del_21q11.2	0.244	1
UBQLN2	Del_22q13.32	0.244	1
HPS3	Amp_17q24.1	0.244	1
PCBP1	Del_22q13.32	0.244	1
BMPR2	17q-Amp	0.245	1
CRIPAK	18q-Del	0.245	1
MPHOSPH10	Amp_20p11.21	0.245	1
IDH1	18q-Del	0.245	1
ECT2	Amp_20p11.21	0.245	1
DCLK2	Del_18p11.31	0.245	1
PIK3R1	Del_18p11.31	0.245	1
SMAD4	Amp_16p11.2	0.245	1
PRKDC	Del_1p33	0.246	1
RBMX	Amp_11p15.5	0.246	1
GMPS	Amp_11p15.5	0.246	1
C2orf29	Del_1p33	0.246	1
FKBP9	Amp_11p15.5	0.246	1
FKBP9	Del_1p33	0.246	1
MAP4K3	Del_1p33	0.246	1
KCTD3	Amp_11p15.5	0.246	1
KCTD3	Del_1p33	0.246	1
PLXNA3	Del_1p33	0.246	1
Amp_8p11.23	Del_1p33	0.246	1
Amp_11p15.5	Del_3p26.1	0.246	1
CDH1	Del_14q31.1	0.247	1
NF1	Del_15q22.33	0.248	1
P2RY13	8p-Del	0.248	1
NR1H3	8p-Del	0.248	1
ZBTB20	4q-Del	0.248	1
KCTD3	Del_15q21.1	0.248	1
1q-Amp	4q-Del	0.248	1
Del_15q21.1	Del_16p13.3	0.248	1
ARID1A	Del_5q12.1	0.249	1
TXNDC2	Del_5q22.2	0.249	1
RHOA	Del_4q22.1	0.249	1
OR4D10	7q-Amp	0.249	1
RBMX	Del_8p22	0.249	1
GPATCH8	7q-Amp	0.249	1
TOP2B	Del_5q22.2	0.249	1
TOP2B	Del_15q22.33	0.249	1
C2orf29	Del_8p22	0.249	1
C14orf43	14q-Del	0.249	1
PIK3R1	20p-Amp	0.249	1
BCL9	Amp_8p11.21	0.249	1
IDH2	Del_8p22	0.249	1
C15orf52	22q-Del	0.249	1
C15orf52	Del_4q22.1	0.249	1
Amp_6p21.1	Del_4q22.1	0.249	1
BCOR	7q-Amp	0.25	1
NF1	PCBP1	0.25	1
NR1H3	RB1	0.25	1
ALPK2	Del_5q22.2	0.25	1
ALPK2	Del_15q22.33	0.25	1
PLEKHF2	7p-Amp	0.25	1
GRB2	17p-Del	0.25	1
PCBP1	7p-Amp	0.25	1
ASXL1	12q-Amp	0.251	1
NR1H3	Amp_20p11.21	0.251	1
EGR1	14q-Del	0.251	1
ATM	Del_9p21.3	0.251	1
CYSLTR2	18q-Del	0.251	1
CYSLTR2	Amp_20p11.21	0.251	1
GRB2	14q-Del	0.251	1
SLK	15q-Del	0.251	1
RNF43	Del_12p13.2	0.252	1
FMN2	Amp_11p15.5	0.252	1
OR4D10	Del_18q12.2	0.252	1
ALPK2	5q-Del	0.252	1
ROS1	Amp_11p15.5	0.252	1
ARID1A	7p-Amp	0.253	1
ACVR1B	ECT2	0.253	1
ACVR1B	ALDH1A3	0.253	1
ACVR1B	Amp_16p11.2	0.253	1
ACVR1B	Del_17q24.3	0.253	1
CRIPAK	Del_8p23.2	0.253	1
MAPK6	Del_10q23.31	0.253	1
FMN2	Del_4q35.1	0.253	1
DIP2B	20p-Amp	0.253	1
FBXW7	Del_3p26.1	0.253	1
IDH1	Amp_13q12.13	0.253	1
IDH1	Del_10q23.31	0.253	1
ROS1	Del_4q35.1	0.253	1
ECT2	Del_10q23.31	0.253	1
ALDH1A3	Del_10q23.31	0.253	1
C14orf43	Del_10q23.31	0.253	1
Del_3p14.2	Del_5q22.2	0.253	1
WNT1	20p-Amp	0.254	1
MLH1	Amp_8p11.23	0.255	1
ZFP36L2	20q-Amp	0.255	1
OR4D10	20q-Amp	0.255	1
SMAD2	Del_1p13.1	0.255	1
SLC26A8	Del_1p13.1	0.255	1
RLIM	20q-Amp	0.255	1
20q-Amp	Del_6p25.3	0.255	1
Amp_8p11.23	Del_15q15.2	0.255	1
Amp_19q13.11	Del_1p13.1	0.255	1
TP53	RHOA	0.256	1
TP53	MGA	0.256	1
TPRKB	Del_17p12	0.256	1
THOC7	RB1	0.256	1
RB1	PCBP1	0.256	1
PLEKHF2	Del_17p12	0.256	1
ATM	Amp_5p13.2	0.256	1
PCBP1	Del_17p12	0.256	1
APC	EGR1	0.257	1
CRIPAK	Del_18q22.1	0.257	1
RHOA	Amp_20p11.21	0.257	1
PLAGL2	Amp_20p11.21	0.257	1
IDH1	Del_18q22.1	0.257	1
PTEN	Del_1p13.1	0.257	1
18q-Del	Amp_6p21.1	0.257	1
MLH1	Del_3p26.1	0.258	1
RBMX	Del_1p36.11	0.258	1
C11orf30	Amp_5p13.2	0.258	1
GMPS	Del_15q15.2	0.258	1
L1TD1	Del_1p36.11	0.258	1
BCL9	Amp_5p13.2	0.258	1
BCL9	Amp_8p11.23	0.258	1
FKBP9	Del_1p36.11	0.258	1
MAP4K3	Del_1p36.11	0.258	1
KCTD3	Del_1p36.11	0.258	1
KCTD3	Del_15q15.2	0.258	1
SMAD4	8p-Amp	0.258	1
BCOR	Del_10q21.1	0.259	1
CDH1	Del_17q24.3	0.259	1
KDM6A	Del_3p26.1	0.259	1
NF2	Del_1p33	0.259	1
PRKDC	ALG12	0.259	1
DIP2B	Del_16p13.3	0.259	1
SETD2	Del_14q31.1	0.259	1
IQCD	20q-Amp	0.259	1
PLEKHF2	20q-Amp	0.259	1
HPS3	Del_10q25.2	0.259	1
PRPS1	20q-Amp	0.259	1
PCBP1	20q-Amp	0.259	1
Amp_8p11.23	Del_7q31.1	0.259	1
ACVR1B	14q-Del	0.26	1
MLH1	4q-Del	0.26	1
NTAN1	Del_4q35.1	0.26	1
MGA	Del_21q11.2	0.26	1
TPRKB	Del_4q35.1	0.26	1
UBQLN2	Del_4q35.1	0.26	1
RB1	Amp_13q22.1	0.26	1
KIAA1586	Del_4q35.1	0.26	1
LINGO4	Del_4q35.1	0.26	1
GRB2	18q-Del	0.26	1
TXNDC2	8p-Amp	0.261	1
ZFP36L2	13q-Amp	0.261	1
PTEN	22q-Del	0.261	1
NLRC4	13q-Amp	0.261	1
13q-Amp	Del_6p25.3	0.261	1
OR4D10	Amp_20q11.21	0.262	1
ZBTB20	Amp_17q24.1	0.262	1
PLAGL2	Amp_13q12.13	0.262	1
ROS1	8p-Del	0.262	1
CHD3	1q-Amp	0.262	1
RLIM	Amp_20q11.21	0.262	1
Amp_20q11.21	Del_6p25.3	0.262	1
RB1	Amp_17q24.1	0.263	1
CYLD	Amp_13q22.1	0.263	1
TP53	BCOR	0.264	1
TP53	GMPS	0.264	1
SOX9	4q-Del	0.264	1
RHOA	Amp_20q11.21	0.264	1
ATG5	Amp_20q11.21	0.264	1
PRPS1	Amp_20q11.21	0.264	1
Amp_6p21.1	Amp_13q12.13	0.264	1
Amp_20q11.21	Del_6q26	0.264	1
TP53	TOP2B	0.265	1
SOX9	ROS1	0.265	1
CDH1	Del_8q11.1	0.265	1
WNT1	Del_14q31.1	0.265	1
PRKDC	Amp_8p11.21	0.265	1
ALG12	Del_14q31.1	0.265	1
ZBTB20	Del_21q11.2	0.265	1
C2orf29	20p-Amp	0.265	1
PLEKHF2	Amp_20q11.21	0.265	1
PTGDR	Del_14q31.1	0.265	1
PCBP1	Amp_20q11.21	0.265	1
SLK	22q-Del	0.265	1
1q-Amp	Del_21q11.2	0.265	1
B2M	Del_5q12.1	0.266	1
CDH1	Del_1p13.1	0.266	1
PRKDC	1p-Del	0.266	1
P2RY13	Del_5q12.1	0.266	1
P2RY13	Del_15q11.2	0.266	1
NR1H3	Del_5q12.1	0.266	1
DDX26B	Del_5q12.1	0.266	1
DDX26B	Del_15q11.2	0.266	1
SMAD4	Del_18q12.2	0.266	1
1p-Del	Amp_8p11.23	0.266	1
Amp_11p15.5	Del_3p14.2	0.266	1
MLH1	Amp_20q12	0.267	1
ZFP36L2	Amp_17q12	0.267	1
MAPK6	4q-Del	0.267	1
NF2	Del_22q13.32	0.267	1
OR4D10	21q-Del	0.267	1
OR4D10	Amp_17q12	0.267	1
MVK	4p-Del	0.267	1
MVK	Amp_17q12	0.267	1
MVK	Del_3p14.2	0.267	1
ASXL1	Amp_8p11.23	0.267	1
SMAD2	PTEN	0.267	1
MPHOSPH10	4q-Del	0.267	1
GPATCH8	Amp_17q12	0.267	1
GPATCH8	Del_3p14.2	0.267	1
ALDH1A3	4q-Del	0.267	1
ATP6V1B1	21q-Del	0.267	1
ATP6V1B1	4p-Del	0.267	1
ATP6V1B1	Amp_17q12	0.267	1
NAA25	21q-Del	0.267	1
NAA25	Amp_17q12	0.267	1
RLIM	21q-Del	0.267	1
RLIM	Amp_17q12	0.267	1
RLIM	Del_3p14.2	0.267	1
17q-Amp	4p-Del	0.267	1
RHOA	Del_5q21.1	0.268	1
MGA	Amp_6p21.1	0.268	1
MGA	Del_6q26	0.268	1
MGA	Del_8q11.1	0.268	1
SLC26A8	Amp_11p15.5	0.268	1
C15orf52	Del_5q21.1	0.268	1
Amp_19q13.11	Del_1p33	0.268	1
Del_1p33	Del_19p13.3	0.268	1
STARD3NL	17p-Del	0.269	1
SETD2	4p-Del	0.269	1
RPTN	17p-Del	0.269	1
ECT2	Amp_13q22.1	0.269	1
8p-Amp	4p-Del	0.269	1
MGA	Amp_17q24.1	0.271	1
ASXL1	16p-Amp	0.271	1
PLAGL2	Amp_13q22.1	0.271	1
NLRC4	Del_5q21.1	0.271	1
ATM	8q-Amp	0.271	1
WNT1	8p-Del	0.272	1
STARD3NL	Del_17p12	0.272	1
ALG12	8p-Del	0.272	1
GPATCH8	8q-Amp	0.272	1
RPTN	Del_17p12	0.272	1
TOP2B	Del_15q11.2	0.272	1
DCLK2	Del_17p12	0.272	1
8q-Amp	1p-Del	0.272	1
ARID1A	Amp_6p21.1	0.273	1
ARID1A	Del_3q26.31	0.273	1
ARID1A	Del_6q26	0.273	1
ACVR1B	PLXNA3	0.273	1
ACVR1B	Del_3p26.1	0.273	1
ACVR1B	Del_16p13.3	0.273	1
RBMX	Del_10q23.31	0.273	1
C11orf30	Del_5q22.2	0.273	1
C11orf30	Del_15q22.33	0.273	1
GMPS	Del_10q23.31	0.273	1
L1TD1	Del_10q23.31	0.273	1
C2orf29	Del_10q23.31	0.273	1
BCL9	Del_5q22.2	0.273	1
BCL9	Del_15q22.33	0.273	1
FKBP9	Del_10q23.31	0.273	1
MAP4K3	Del_10q23.31	0.273	1
PLXNA3	Del_10q23.31	0.273	1
BCOR	Amp_8p11.23	0.274	1
NF2	13q-Amp	0.274	1
NLRC4	Del_15q21.1	0.274	1
PTCH1	Amp_17q24.1	0.274	1
ZFP36L2	Del_14q31.1	0.275	1
NF2	1p-Del	0.275	1
OR4D10	Del_14q31.1	0.275	1
THOC7	Del_8p22	0.275	1
UBQLN2	Amp_8q24.21	0.275	1
RB1	Del_15q11.2	0.275	1
TOP2B	15q-Del	0.275	1
KIAA1586	Amp_8q24.21	0.275	1
IQCD	Del_8p22	0.275	1
Del_6p25.3	Del_14q31.1	0.275	1
MVK	SMAD4	0.276	1
PTCH1	Del_15q22.33	0.276	1
Amp_6p21.1	Amp_13q22.1	0.277	1
B2M	Del_1p13.1	0.278	1
P2RY13	Del_1p13.1	0.278	1
NR1H3	Del_1p13.1	0.278	1
ZBTB20	Del_10q25.2	0.278	1
DDX26B	Del_1p13.1	0.278	1
PIK3R1	Del_12p13.2	0.278	1
MAP4K3	17p-Del	0.278	1
PRPS1	Del_1p36.11	0.278	1
IDH2	17p-Del	0.278	1
SLK	1q-Amp	0.278	1
1q-Amp	Del_16q23.1	0.278	1
Amp_16q12.1	Del_1p13.1	0.278	1
Amp_17p11.2	Del_1p36.11	0.278	1
SOX9	Amp_6p21.1	0.279	1
SOX9	Del_3q26.31	0.279	1
SOX9	Del_6q26	0.279	1
MLH1	21q-Del	0.279	1
MLH1	4p-Del	0.279	1
WNT1	Del_8p23.2	0.28	1
RBMX	14q-Del	0.28	1
SMAD2	Del_15q21.1	0.28	1
DCLK2	Amp_20q13.12	0.28	1
BCL9	8p-Del	0.28	1
PCBP1	Del_18q21.2	0.28	1
8q-Amp	8p-Del	0.28	1
Del_9p21.3	Del_15q21.1	0.28	1
BCOR	Amp_19q13.11	0.281	1
KDM6A	Amp_19q13.11	0.281	1
C2orf29	13q-Amp	0.281	1
SMAD4	Amp_17q24.1	0.281	1
SELPLG	Del_17p12	0.282	1
CRIPAK	BCORL1	0.282	1
CRIPAK	Amp_17q24.1	0.282	1
MAPK6	Amp_17q24.1	0.282	1
DIP2B	18p-Del	0.282	1
MPHOSPH10	Amp_17q24.1	0.282	1
IDH1	CHD3	0.282	1
SETD2	14q-Del	0.282	1
EGR1	Del_22q13.32	0.282	1
ROS1	Amp_16p11.2	0.282	1
ROS1	Del_17q24.3	0.282	1
ECT2	Amp_17q24.1	0.282	1
ALDH1A3	Amp_17q24.1	0.282	1
NLRC4	Del_17q24.3	0.282	1
C14orf43	Amp_17q24.1	0.282	1
CHD3	Amp_16p11.2	0.282	1
CHD3	Del_17q24.3	0.282	1
GRB2	Del_21q11.2	0.282	1
GRB2	Del_22q13.32	0.282	1
Amp_17q24.1	Del_17q24.3	0.282	1
TXNDC2	Amp_20p11.23	0.283	1
ASXL1	Del_14q31.1	0.283	1
SOX9	Amp_20p11.23	0.284	1
GPATCH8	8p-Del	0.284	1
7q-Amp	Del_3p14.2	0.284	1
ASXL1	21q-Del	0.285	1
ASXL1	4p-Del	0.285	1
ASXL1	Del_3p14.2	0.285	1
ALG12	Del_15q11.2	0.285	1
KDM6A	Del_3p14.2	0.286	1
NF1	Del_3p14.2	0.286	1
C11orf30	8p-Amp	0.286	1
FAM123B	ACVR1B	0.287	1
BCOR	Del_14q31.1	0.287	1
NTAN1	Del_5q22.2	0.287	1
NTAN1	Del_15q22.33	0.287	1
TPRKB	Del_5q22.2	0.287	1
THOC7	Amp_12p13.33	0.287	1
UBQLN2	Amp_12p13.33	0.287	1
UBQLN2	Del_5q22.2	0.287	1
UBQLN2	Del_15q22.33	0.287	1
KIAA1586	Del_5q22.2	0.287	1
KIAA1586	Del_15q22.33	0.287	1
NLRC4	Del_1p36.11	0.287	1
NLRC4	Del_15q15.2	0.287	1
LINGO4	20p-Amp	0.287	1
LINGO4	Del_5q22.2	0.287	1
BCORL1	Del_1p36.11	0.287	1
BCORL1	Del_15q15.2	0.287	1
Del_5q22.2	Del_12p13.2	0.287	1
ATXN3L	4q-Del	0.288	1
ASXL1	Amp_12p13.33	0.288	1
GPATCH8	7p-Amp	0.288	1
ALPK2	15q-Del	0.288	1
CTNNB1	Del_3p26.1	0.288	1
GMPS	4q-Del	0.288	1
L1TD1	4q-Del	0.288	1
ATP6V1B1	7p-Amp	0.288	1
FKBP9	4q-Del	0.288	1
MAP4K3	4q-Del	0.288	1
KCTD3	4q-Del	0.288	1
TOP2B	22q-Del	0.289	1
1q-Amp	Del_4q35.1	0.289	1
APC	RNF43	0.29	1
APC	Amp_17q12	0.29	1
BCOR	Del_21q11.2	0.29	1
KIAA1586	Amp_8p11.21	0.29	1
PLEKHF2	Amp_8p11.21	0.29	1
PCBP1	Amp_8p11.21	0.29	1
MLH1	Del_9p21.3	0.291	1
NF1	Del_10q25.2	0.291	1
OR4D10	Del_5q12.1	0.291	1
MVK	Del_5q12.1	0.291	1
SMAD2	Del_15q15.2	0.291	1
NR1H3	Amp_8p11.21	0.291	1
GPATCH8	Del_5q12.1	0.291	1
SLC26A8	Del_15q15.2	0.291	1
Amp_13q12.13	Del_16q23.1	0.291	1
Amp_19q13.11	Del_1p36.11	0.291	1
Del_9p21.3	Del_15q15.2	0.291	1
TP53	TPRKB	0.292	1
TP53	KIAA1586	0.292	1
B2M	Amp_11p15.5	0.292	1
P2RY13	Del_1p33	0.292	1
Amp_11p15.5	Amp_16q12.1	0.292	1
RPTN	Amp_8q24.21	0.293	1
DCLK2	Del_8p22	0.293	1
ATM	Del_8p22	0.293	1
HPS3	Amp_20p11.21	0.293	1
PRPS1	14q-Del	0.293	1
PCBP1	Del_18q22.1	0.293	1
CRIPAK	Del_21q11.2	0.294	1
MAPK6	Del_21q11.2	0.294	1
STARD3NL	21q-Del	0.294	1
STARD3NL	Amp_17q12	0.294	1
MGA	Del_10q25.2	0.294	1
MPHOSPH10	Del_21q11.2	0.294	1
IDH1	18p-Del	0.294	1
RPTN	21q-Del	0.294	1
RPTN	Amp_17q12	0.294	1
RBM44	Amp_17q12	0.294	1
ALDH1A3	Del_21q11.2	0.294	1
ALDH1A3	Del_22q13.32	0.294	1
DCLK2	Amp_17q12	0.294	1
PTCH1	Del_1p33	0.294	1
C14orf43	Del_21q11.2	0.294	1
12q-Amp	Del_5q21.1	0.294	1
CRIPAK	8q-Amp	0.295	1
DIP2B	SMAD4	0.295	1
ALDH1A3	8q-Amp	0.295	1
C14orf43	8q-Amp	0.295	1
C14orf184	Del_18p11.31	0.295	1
ATG5	Del_18q12.2	0.295	1
GRB2	18p-Del	0.295	1
TXNDC2	Del_18q21.2	0.296	1
ACVR1B	Del_9p21.3	0.296	1
ACVR1B	Del_19p13.3	0.296	1
FMN2	Amp_8p11.21	0.296	1
FBXW7	Amp_17p11.2	0.296	1
SMAD2	Del_10q23.31	0.296	1
SETD2	Del_12p13.2	0.296	1
SLC26A8	Del_10q23.31	0.296	1
PLEKHF2	8p-Amp	0.296	1
PCBP1	8p-Amp	0.296	1
TP53	P2RY13	0.297	1
BMPR2	Del_5q21.1	0.297	1
FBXW7	Del_8p23.2	0.297	1
RB1	1p-Del	0.297	1
CYSLTR2	18p-Del	0.297	1
18p-Del	Amp_6p21.1	0.297	1
CDH1	Del_3p26.1	0.298	1
SELPLG	Del_18q12.2	0.298	1
MAPK6	Del_10q25.2	0.298	1
MPHOSPH10	Del_10q25.2	0.298	1
EGR1	Del_4q35.1	0.298	1
ROS1	Del_15q11.2	0.298	1
ECT2	12q-Amp	0.298	1
ECT2	Del_10q25.2	0.298	1
ALDH1A3	Del_10q25.2	0.298	1
RB1	4p-Del	0.298	1
RB1	Amp_17q12	0.298	1
C14orf43	Del_10q25.2	0.298	1
IDH2	SMAD4	0.298	1
GRB2	Del_4q35.1	0.298	1
SLK	Del_17q24.3	0.298	1
SMAD4	Amp_20q12	0.298	1
Amp_16p11.2	Del_16q23.1	0.298	1
ASXL1	8p-Del	0.299	1
SETD2	Del_8p22	0.299	1
ATM	Del_5q12.1	0.299	1
8p-Amp	Del_8p22	0.299	1
BMPR2	Del_3q26.31	0.3	1
BMPR2	Del_6q26	0.3	1
TPRKB	13q-Amp	0.3	1
C11orf30	15q-Del	0.3	1
KIAA1586	13q-Amp	0.3	1
LINGO4	13q-Amp	0.3	1
BCL9	15q-Del	0.3	1
HPS3	Del_5q22.2	0.3	1
HPS3	Del_15q22.33	0.3	1
FMN2	Del_10q23.31	0.301	1
FAM123B	ATXN3L	0.302	1
FAM123B	IDH2	0.302	1
SELPLG	FBXW7	0.302	1
FBXW7	Amp_6p21.1	0.302	1
OR4D10	Del_15q11.2	0.303	1
MVK	Del_15q11.2	0.303	1
RBMX	Amp_17q24.1	0.303	1
C11orf30	Del_15q11.2	0.303	1
GMPS	Amp_17q24.1	0.303	1
NLRC4	Del_3p26.1	0.303	1
PIK3R1	Del_1p13.1	0.303	1
BCL9	Del_15q11.2	0.303	1
NAA25	Del_15q11.2	0.303	1
CHD3	Del_3p26.1	0.303	1
FKBP9	Amp_17q24.1	0.303	1
RLIM	Del_15q11.2	0.303	1
CYLD	Del_15q11.2	0.303	1
MAP4K3	Amp_17q24.1	0.303	1
KCTD3	Amp_17q24.1	0.303	1
BCORL1	Del_3p26.1	0.303	1
PLXNA3	Amp_17q24.1	0.303	1
SLK	Del_15q21.1	0.303	1
Amp_17q12	Del_4q22.1	0.303	1
Amp_17q24.1	Del_16p13.3	0.303	1
Del_6p25.3	Del_15q11.2	0.303	1
NF1	13q-Amp	0.304	1
OR4D10	Del_1p13.1	0.304	1
MVK	Del_1p13.1	0.304	1
FBXW7	Del_8p22	0.304	1
GPATCH8	Del_1p13.1	0.304	1
ATP6V1B1	Del_1p13.1	0.304	1
NAA25	Del_1p13.1	0.304	1
17q-Amp	Del_1p13.1	0.304	1
BCOR	CYSLTR2	0.305	1
BCOR	Amp_16q12.1	0.305	1
NTAN1	15q-Del	0.305	1
CRIPAK	Amp_20p11.23	0.305	1
KDM6A	NR1H3	0.305	1
MAPK6	Amp_20p11.23	0.305	1
PRKDC	Del_10q23.31	0.305	1
ATXN3L	Amp_20p11.21	0.305	1
DIP2B	Amp_16q12.1	0.305	1
MPHOSPH10	Amp_20p11.23	0.305	1
CTNNB1	16p-Amp	0.305	1
UBQLN2	15q-Del	0.305	1
ALDH1A3	Amp_20p11.23	0.305	1
GMPS	Amp_20p11.21	0.305	1
KIAA1586	15q-Del	0.305	1
C2orf29	Amp_20p11.21	0.305	1
PTCH1	Del_6p25.3	0.305	1
LINGO4	15q-Del	0.305	1
IDH2	Amp_20p11.21	0.305	1
ARID1A	Del_4q22.1	0.306	1
RNF43	Amp_16p11.2	0.306	1
FAM123B	CDH1	0.306	1
SELPLG	Del_8p22	0.306	1
RPTN	Amp_8p11.23	0.306	1
RBM44	Amp_8p11.23	0.306	1
DCLK2	Amp_8p11.23	0.306	1
SLC26A8	Amp_8q24.21	0.306	1
ACVR1B	21q-Del	0.307	1
NF1	Del_8p22	0.307	1
RBMX	Del_8p23.2	0.307	1
ASXL1	8p-Amp	0.307	1
C2orf29	Del_8p23.2	0.307	1
MAP4K3	Del_8p23.2	0.307	1
ARID1A	Del_16p13.3	0.308	1
DCLK2	20p-Amp	0.308	1
8p-Amp	Del_15q11.2	0.308	1
22q-Del	Amp_12p13.33	0.308	1
SOX9	SLK	0.309	1
SOX9	Del_10q25.2	0.309	1
FAM123B	GGT1	0.309	1
FAM123B	PRPS1	0.309	1
FAM123B	Amp_17p11.2	0.309	1
ATXN3L	Del_18q21.2	0.309	1
RBMX	Del_18q21.2	0.309	1
APC	Amp_12p13.33	0.31	1
SLC26A8	4q-Del	0.31	1
Amp_20p11.21	Del_1p33	0.31	1
ARID1A	Amp_11p15.5	0.311	1
SOX9	5q-Del	0.311	1
CRIPAK	Del_18p11.31	0.311	1
IDH1	Del_18p11.31	0.311	1
PTEN	Del_1p33	0.311	1
PIK3R1	Amp_20q12	0.311	1
ATM	Amp_16p11.2	0.311	1
Amp_13q22.1	Del_16q23.1	0.311	1
APC	Amp_11p15.5	0.312	1
RHOA	ATM	0.312	1
RHOA	Del_18p11.31	0.312	1
C11orf30	1q-Amp	0.312	1
PIK3R1	7q-Amp	0.312	1
ATM	Amp_6p21.1	0.312	1
ATM	Del_3q26.31	0.312	1
ATM	Del_6q26	0.312	1
8q-Amp	22q-Del	0.312	1
CDH1	5q-Del	0.313	1
WNT1	Amp_20p11.23	0.313	1
SELPLG	14q-Del	0.313	1
PRKDC	4p-Del	0.313	1
PRKDC	Del_3p14.2	0.313	1
SMAD2	14q-Del	0.313	1
PTCH1	Del_16q23.1	0.313	1
PIK3R1	Del_21q11.2	0.313	1
HPS3	8p-Amp	0.313	1
14q-Del	Amp_19q13.11	0.313	1
TXNDC2	Del_17q24.3	0.314	1
CRIPAK	7p-Amp	0.314	1
MAPK6	7p-Amp	0.314	1
FMN2	Del_3p26.1	0.314	1
NF1	Del_17q24.3	0.314	1
C11orf30	22q-Del	0.314	1
C11orf30	Del_4q22.1	0.314	1
ROS1	Del_3p26.1	0.314	1
ECT2	7p-Amp	0.314	1
ALDH1A3	7p-Amp	0.314	1
TOP2B	Del_17q24.3	0.314	1
GMPS	Amp_13q12.13	0.314	1
C2orf29	Amp_13q12.13	0.314	1
BCL9	Del_4q22.1	0.314	1
CYLD	22q-Del	0.314	1
BCORL1	14q-Del	0.314	1
GRB2	Amp_20q13.12	0.314	1
TXNDC2	Del_18q22.1	0.315	1
NTAN1	22q-Del	0.315	1
FMN2	Amp_12p13.33	0.315	1
TPRKB	22q-Del	0.315	1
TPRKB	Del_4q22.1	0.315	1
ROS1	Del_5q22.2	0.315	1
ROS1	Del_15q22.33	0.315	1
UBQLN2	22q-Del	0.315	1
UBQLN2	Del_4q22.1	0.315	1
KIAA1586	22q-Del	0.315	1
LINGO4	Del_4q22.1	0.315	1
IQCD	22q-Del	0.315	1
PCBP1	22q-Del	0.315	1
17p-Del	Amp_17p11.2	0.315	1
STARD3NL	Del_14q31.1	0.316	1
P2RY13	Del_15q21.1	0.316	1
RPTN	Del_14q31.1	0.316	1
DDX26B	Del_15q21.1	0.316	1
RB1	Amp_8p11.21	0.316	1
DCLK2	Del_14q31.1	0.316	1
PIK3R1	GRB2	0.316	1
C14orf184	Del_17p12	0.316	1
CYSLTR2	Del_15q21.1	0.316	1
Amp_16q12.1	Del_15q21.1	0.316	1
MLH1	Del_10q25.2	0.317	1
OR4D10	Amp_11p15.5	0.317	1
OR4D10	Del_1p33	0.317	1
MVK	Amp_11p15.5	0.317	1
MVK	Del_1p33	0.317	1
GPATCH8	Amp_11p15.5	0.317	1
GPATCH8	Del_1p33	0.317	1
ATP6V1B1	Amp_11p15.5	0.317	1
ATP6V1B1	Del_1p33	0.317	1
NAA25	Amp_11p15.5	0.317	1
NAA25	Del_1p33	0.317	1
SLK	Del_15q15.2	0.317	1
17q-Amp	Del_1p33	0.317	1
Del_1p36.11	Del_16q23.1	0.317	1
FAM123B	8p-Amp	0.318	1
ZFP36L2	18q-Del	0.318	1
STARD3NL	Del_5q12.1	0.318	1
OR4D10	18q-Del	0.318	1
MGA	Amp_5p13.2	0.318	1
RBM44	Del_5q12.1	0.318	1
TOP2B	Del_5q21.1	0.318	1
DCLK2	Del_5q12.1	0.318	1
Amp_20p11.21	Del_6p25.3	0.318	1
ACVR1B	Amp_16q12.1	0.319	1
B2M	Del_10q23.31	0.319	1
NF2	14q-Del	0.319	1
ATXN3L	SLK	0.319	1
RBMX	12q-Amp	0.319	1
RBMX	Del_10q25.2	0.319	1
ALG12	Del_15q21.1	0.319	1
IDH1	Del_4q35.1	0.319	1
CTNNB1	Del_15q15.2	0.319	1
ECT2	Del_4q35.1	0.319	1
GMPS	Del_10q25.2	0.319	1
GMPS	Del_16q23.1	0.319	1
L1TD1	Del_10q25.2	0.319	1
C2orf29	Del_16q23.1	0.319	1
C14orf43	Del_4q35.1	0.319	1
FKBP9	12q-Amp	0.319	1
FKBP9	Del_10q25.2	0.319	1
MAP4K3	12q-Amp	0.319	1
MAP4K3	Del_10q25.2	0.319	1
KCTD3	Del_10q25.2	0.319	1
KCTD3	Del_16q23.1	0.319	1
PTGDR	Del_15q21.1	0.319	1
IDH2	Del_10q25.2	0.319	1
PLXNA3	Del_10q25.2	0.319	1
SLK	Del_3p26.1	0.319	1
SLK	Del_10q21.1	0.319	1
12q-Amp	Del_3p26.1	0.319	1
12q-Amp	Del_10q21.1	0.319	1
APC	1q-Amp	0.32	1
TPRKB	Del_8p23.2	0.32	1
BCOR	Del_4q35.1	0.321	1
CDH1	13q-Amp	0.321	1
PLAGL2	Del_14q31.1	0.321	1
C14orf184	Del_14q31.1	0.321	1
Amp_6p21.1	Del_18q21.2	0.321	1
BCOR	Del_5q12.1	0.322	1
KDM6A	Del_5q12.1	0.322	1
DIP2B	Del_5q12.1	0.322	1
FBXW7	8p-Del	0.322	1
RB1	Del_1p36.11	0.322	1
RHOA	21q-Del	0.323	1
RHOA	4p-Del	0.323	1
RHOA	Amp_17q12	0.323	1
RHOA	Del_3p14.2	0.323	1
SMAD2	20p-Amp	0.323	1
C15orf52	4p-Del	0.323	1
C15orf52	Amp_17q12	0.323	1
8q-Amp	Del_10q23.31	0.323	1
4p-Del	Amp_6p21.1	0.323	1
RPTN	8q-Amp	0.324	1
ECT2	RB1	0.324	1
RB1	Del_17q24.3	0.324	1
DCLK2	13q-Amp	0.324	1
8q-Amp	Del_22q13.32	0.324	1
TP53	Del_16q23.1	0.325	1
RHOA	17p-Del	0.325	1
FMN2	13q-Amp	0.325	1
STARD3NL	8p-Del	0.325	1
EGR1	Del_5q22.2	0.325	1
EGR1	Del_15q22.33	0.325	1
DCLK2	8p-Del	0.325	1
ATG5	Del_22q13.32	0.325	1
PRPS1	Del_21q11.2	0.325	1
PRPS1	Del_22q13.32	0.325	1
GRB2	Amp_12p13.33	0.325	1
Amp_17p11.2	Del_21q11.2	0.325	1
Amp_17p11.2	Del_22q13.32	0.325	1
ZFP36L2	Amp_13q12.13	0.326	1
ATXN3L	Del_18q22.1	0.326	1
ATXN3L	Del_21q11.2	0.326	1
RBMX	Del_22q13.32	0.326	1
SMAD2	Amp_17q24.1	0.326	1
L1TD1	Del_21q11.2	0.326	1
NLRC4	Del_9p21.3	0.326	1
NLRC4	Del_19p13.3	0.326	1
CHD3	Amp_19q13.11	0.326	1
CHD3	Del_9p21.3	0.326	1
CHD3	Del_19p13.3	0.326	1
KCTD3	Del_22q13.32	0.326	1
BCORL1	Amp_19q13.11	0.326	1
BCORL1	Del_19p13.3	0.326	1
PLXNA3	Del_21q11.2	0.326	1
PLXNA3	Del_22q13.32	0.326	1
Amp_13q12.13	Del_6p25.3	0.326	1
MLH1	TMEM126A	0.327	1
MLH1	Del_7q31.1	0.327	1
WNT1	Del_1p36.11	0.327	1
P2RY13	Del_1p36.11	0.327	1
P2RY13	Del_15q15.2	0.327	1
ALG12	Del_1p36.11	0.327	1
ALG12	Del_15q15.2	0.327	1
DDX26B	Del_1p36.11	0.327	1
DDX26B	Del_15q15.2	0.327	1
HPS3	15q-Del	0.327	1
CYSLTR2	Del_1p36.11	0.327	1
CYSLTR2	Del_15q15.2	0.327	1
PTGDR	Del_15q15.2	0.327	1
BCORL1	17p-Del	0.327	1
TMEM126A	Del_1p36.11	0.327	1
4q-Del	Amp_8q24.21	0.327	1
BMPR2	Del_21q11.2	0.328	1
NF2	Amp_20p11.23	0.328	1
DIP2B	Del_15q11.2	0.328	1
ZBTB20	Del_15q22.33	0.328	1
PLAGL2	8p-Del	0.328	1
ALPK2	1q-Amp	0.328	1
4q-Del	Amp_17q12	0.328	1
SELPLG	17p-Del	0.329	1
SMAD2	17p-Del	0.329	1
ROS1	4q-Del	0.329	1
ARID1A	Amp_5p13.2	0.33	1
ASXL1	Del_5q12.1	0.33	1
CTNNB1	Del_19p13.3	0.33	1
PIK3R1	Amp_20q13.12	0.33	1
PTGDR	Del_18q21.2	0.33	1
Del_7q31.1	Del_18q21.2	0.33	1
ARID1A	Del_15q21.1	0.331	1
BCOR	1p-Del	0.331	1
KDM6A	17q-Amp	0.331	1
KDM6A	1p-Del	0.331	1
PLAGL2	Del_8p22	0.331	1
RPTN	Del_1p13.1	0.331	1
RBM44	Del_1p13.1	0.331	1
C14orf184	Del_8p22	0.331	1
SMAD4	12q-Amp	0.331	1
TP53	IDH1	0.332	1
TP53	ECT2	0.332	1
CRIPAK	CYLD	0.332	1
C11orf30	Amp_16p11.2	0.332	1
C11orf30	Del_17q24.3	0.332	1
PTEN	15q-Del	0.332	1
DCLK2	Amp_20q12	0.332	1
BCL9	Amp_16p11.2	0.332	1
BCL9	Del_17q24.3	0.332	1
CYLD	Del_17q24.3	0.332	1
RNF43	GGT1	0.333	1
RNF43	Amp_17p11.2	0.333	1
BMPR2	16p-Amp	0.333	1
BMPR2	5q-Del	0.333	1
NF1	Amp_5p13.2	0.333	1
ALG12	Amp_20q13.12	0.333	1
TMEM126A	Amp_20q13.12	0.333	1
GRB2	Del_17p12	0.333	1
B2M	4q-Del	0.334	1
FBXW7	Del_5q22.2	0.334	1
ASXL1	Del_15q11.2	0.334	1
NR1H3	4q-Del	0.334	1
DDX26B	4q-Del	0.334	1
TOP2B	Del_15q21.1	0.334	1
CYSLTR2	4q-Del	0.334	1
Amp_5p13.2	Del_15q21.1	0.334	1
NTAN1	Del_5q21.1	0.335	1
MGA	PCBP1	0.335	1
ATXN3L	20q-Amp	0.335	1
TPRKB	Del_5q21.1	0.335	1
ALPK2	Del_21q11.2	0.335	1
ROS1	7q-Amp	0.335	1
UBQLN2	Del_5q21.1	0.335	1
KIAA1586	Del_5q21.1	0.335	1
LINGO4	Del_5q21.1	0.335	1
PLEKHF2	Del_5q21.1	0.335	1
ATM	Del_8p23.2	0.335	1
PCBP1	Del_5q21.1	0.335	1
Amp_12p13.33	Del_22q13.32	0.335	1
Del_5q21.1	Del_12p13.2	0.335	1
FAM123B	Del_9p21.3	0.336	1
TXNDC2	Del_10q21.1	0.336	1
TOP2B	Del_3p26.1	0.336	1
TOP2B	Del_16p13.3	0.336	1
GMPS	Amp_5p13.2	0.336	1
L1TD1	Amp_5p13.2	0.336	1
C2orf29	Amp_5p13.2	0.336	1
FKBP9	Amp_5p13.2	0.336	1
MAP4K3	Amp_5p13.2	0.336	1
KCTD3	Amp_5p13.2	0.336	1
PLXNA3	Amp_5p13.2	0.336	1
SMAD4	Del_4q22.1	0.336	1
Amp_5p13.2	Del_3p26.1	0.336	1
Amp_5p13.2	Del_16p13.3	0.336	1
BMPR2	Amp_8q24.21	0.337	1
PRKDC	4q-Del	0.337	1
RNF43	Del_10q21.1	0.338	1
FAM123B	FMN2	0.338	1
FMN2	8p-Amp	0.338	1
ROS1	8p-Amp	0.338	1
RB1	Amp_8q24.21	0.338	1
RBM44	SMAD4	0.339	1
PTCH1	15q-Del	0.339	1
PRKDC	8q-Amp	0.34	1
MGA	4p-Del	0.34	1
MGA	Del_3p14.2	0.34	1
Amp_12p13.33	Del_17p12	0.34	1
BMPR2	8q-Amp	0.341	1
BMPR2	Del_10q25.2	0.341	1
RHOA	Del_17p12	0.341	1
PLAGL2	Del_15q11.2	0.341	1
IDH1	Del_18q12.2	0.341	1
PIK3R1	Amp_8q24.21	0.341	1
PIK3R1	Del_18q22.1	0.341	1
C14orf184	Del_15q11.2	0.341	1
14q-Del	Amp_8p11.21	0.341	1
CDH1	Del_3p14.2	0.342	1
CDH1	Del_8p22	0.342	1
ZFP36L2	Amp_13q22.1	0.342	1
WNT1	14q-Del	0.342	1
ALG12	14q-Del	0.342	1
PLAGL2	20p-Amp	0.342	1
ECT2	7q-Amp	0.342	1
C14orf43	7q-Amp	0.342	1
ATG5	Del_4q35.1	0.342	1
PRPS1	Del_4q35.1	0.342	1
PTGDR	14q-Del	0.342	1
SLK	Amp_19q13.11	0.342	1
SLK	Del_9p21.3	0.342	1
SLK	Del_19p13.3	0.342	1
12q-Amp	Del_9p21.3	0.342	1
12q-Amp	Del_19p13.3	0.342	1
Amp_13q22.1	Del_6p25.3	0.342	1
Amp_17p11.2	Del_4q35.1	0.342	1
Amp_19q13.11	Del_16q23.1	0.342	1
Del_7q31.1	Del_18q22.1	0.342	1
Del_9p21.3	Del_16q23.1	0.342	1
Del_16q23.1	Del_19p13.3	0.342	1
ATXN3L	8q-Amp	0.343	1
CTNNB1	Del_22q13.32	0.343	1
TOP2B	20p-Amp	0.343	1
GMPS	8q-Amp	0.343	1
ATM	21q-Del	0.343	1
ATM	4p-Del	0.343	1
8q-Amp	Del_16p13.3	0.343	1
ATXN3L	Amp_20q11.21	0.344	1
ALPK2	Amp_11p15.5	0.344	1
ALPK2	Del_1p33	0.344	1
EGR1	15q-Del	0.344	1
BCORL1	7q-Amp	0.344	1
IDH2	Amp_20q11.21	0.344	1
Amp_11p15.5	Amp_12p13.33	0.344	1
ACVR1B	RLIM	0.345	1
ACVR1B	1p-Del	0.345	1
OR4D10	Del_10q23.31	0.345	1
MVK	Del_10q23.31	0.345	1
GPATCH8	Del_10q23.31	0.345	1
RPTN	Del_1p33	0.345	1
RPTN	Del_15q11.2	0.345	1
RBM44	Amp_11p15.5	0.345	1
RBM44	Del_1p33	0.345	1
DCLK2	Del_15q11.2	0.345	1
RLIM	Del_10q23.31	0.345	1
SOX9	NTAN1	0.346	1
APC	NR1H3	0.347	1
ACVR1B	Del_4q35.1	0.347	1
RPTN	Del_8p23.2	0.347	1
ACVR1B	7p-Amp	0.348	1
CRIPAK	Del_17p12	0.348	1
RHOA	Del_5q12.1	0.348	1
FMN2	Amp_19q13.11	0.348	1
FMN2	Del_9p21.3	0.348	1
FMN2	Del_19p13.3	0.348	1
DIP2B	Del_17p12	0.348	1
TOP2B	Del_15q15.2	0.348	1
ATG5	18q-Del	0.348	1
ATG5	Amp_20p11.21	0.348	1
C15orf52	Del_5q12.1	0.348	1
Amp_5p13.2	Del_15q15.2	0.348	1
B2M	14q-Del	0.349	1
ZBTB20	1q-Amp	0.349	1
NR1H3	Amp_17q24.1	0.35	1
DDX26B	Amp_17q24.1	0.35	1
NLRC4	Amp_16q12.1	0.35	1
CHD3	Amp_16q12.1	0.35	1
HPS3	Amp_16p11.2	0.35	1
HPS3	Del_17q24.3	0.35	1
1q-Amp	8p-Del	0.35	1
ARID1A	SMAD2	0.351	1
PRKDC	Del_3q26.31	0.351	1
PRKDC	Del_6q26	0.351	1
PRKDC	Del_8q11.1	0.351	1
RBMX	Del_4q35.1	0.351	1
L1TD1	Del_4q35.1	0.351	1
IDH2	Del_4q35.1	0.351	1
PLXNA3	Del_4q35.1	0.351	1
C15orf52	Amp_8p11.23	0.351	1
ALPK2	8q-Amp	0.352	1
EGR1	Amp_8q24.21	0.352	1
NLRC4	21q-Del	0.352	1
NLRC4	4p-Del	0.352	1
NLRC4	Del_3p14.2	0.352	1
CHD3	21q-Del	0.352	1
CHD3	Del_3p14.2	0.352	1
PLAGL2	13q-Amp	0.353	1
C11orf30	Del_3p26.1	0.354	1
C11orf30	Del_10q21.1	0.354	1
C11orf30	Del_16p13.3	0.354	1
EGR1	22q-Del	0.354	1
EGR1	Del_4q22.1	0.354	1
BCL9	Del_3p26.1	0.354	1
BCL9	Del_10q21.1	0.354	1
BCL9	Del_16p13.3	0.354	1
CYLD	Del_3p26.1	0.354	1
GRB2	22q-Del	0.354	1
GRB2	Del_4q22.1	0.354	1
SMAD4	Del_1p13.1	0.354	1
OR4D10	Del_15q21.1	0.355	1
MVK	Del_15q21.1	0.355	1
PTEN	Del_5q22.2	0.355	1
PTEN	Del_15q22.33	0.355	1
DCLK2	20q-Amp	0.355	1
NAA25	Del_15q21.1	0.355	1
RLIM	Del_15q21.1	0.355	1
SMAD4	Amp_20q13.12	0.355	1
CDH1	Del_15q22.33	0.356	1
ASXL1	1q-Amp	0.356	1
ZBTB20	15q-Del	0.356	1
PTEN	Del_8p23.2	0.356	1
PTCH1	Amp_5p13.2	0.356	1
ATM	Del_10q23.31	0.356	1
16p-Amp	Del_3p14.2	0.356	1
APC	BMPR2	0.357	1
ZFP36L2	Del_18q21.2	0.357	1
Del_6p25.3	Del_18q21.2	0.357	1
FAM123B	WNT1	0.358	1
FAM123B	ALG12	0.358	1
MAPK6	Del_5q22.2	0.358	1
IDH1	Del_5q22.2	0.358	1
IDH1	Del_15q22.33	0.358	1
ALPK2	Amp_16p11.2	0.358	1
ECT2	Amp_12p13.33	0.358	1
ECT2	Del_5q22.2	0.358	1
ALDH1A3	Del_15q22.33	0.358	1
C14orf43	Del_5q22.2	0.358	1
C14orf43	Del_15q22.33	0.358	1
GRB2	Amp_20q12	0.358	1
PCBP1	Del_18q12.2	0.358	1
Amp_16p11.2	Del_5q22.2	0.358	1
SOX9	21q-Del	0.359	1
TXNDC2	Del_9p21.3	0.359	1
TXNDC2	Del_19p13.3	0.359	1
CTNNB1	PCBP1	0.359	1
TOP2B	Amp_19q13.11	0.359	1
SLC26A8	Amp_5p13.2	0.359	1
SOX9	BCL9	0.36	1
MLH1	Del_1p13.1	0.36	1
SELPLG	Del_21q11.2	0.36	1
OR4D10	4q-Del	0.36	1
MVK	4q-Del	0.36	1
SMAD2	Del_21q11.2	0.36	1
SMAD2	Del_22q13.32	0.36	1
PIK3R1	Amp_17p11.2	0.36	1
ATP6V1B1	4q-Del	0.36	1
NAA25	4q-Del	0.36	1
17q-Amp	4q-Del	0.36	1
4q-Del	Del_6p25.3	0.36	1
Amp_8p11.21	Del_10q25.2	0.36	1
Amp_19q13.11	Del_22q13.32	0.36	1
FAM123B	Del_22q13.32	0.361	1
BCOR	Amp_11p15.5	0.361	1
BCOR	Del_1p33	0.361	1
CDH1	Del_22q13.32	0.361	1
RHOA	Del_1p13.1	0.361	1
RHOA	Del_14q31.1	0.361	1
FMN2	21q-Del	0.361	1
FMN2	Del_3p14.2	0.361	1
NF2	Amp_6p21.1	0.361	1
NF2	Del_3q26.31	0.361	1
NF2	Del_6q26	0.361	1
NF2	Del_8q11.1	0.361	1
ROS1	15q-Del	0.361	1
ROS1	21q-Del	0.361	1
ROS1	Amp_17q12	0.361	1
C15orf52	Del_1p13.1	0.361	1
Amp_6p21.1	Del_14q31.1	0.361	1
CDH1	Amp_13q12.13	0.362	1
NF1	Amp_13q12.13	0.362	1
ATM	Del_16q23.1	0.362	1
NF1	Del_3p26.1	0.363	1
THOC7	Amp_20p11.23	0.363	1
C2orf29	7p-Amp	0.363	1
LINGO4	Amp_20p11.23	0.363	1
PIK3R1	Del_18q12.2	0.363	1
PLEKHF2	Amp_20p11.23	0.363	1
FKBP9	7p-Amp	0.363	1
PLXNA3	7p-Amp	0.363	1
SMAD4	14q-Del	0.363	1
SMAD4	21q-Del	0.363	1
RHOA	Amp_8q24.21	0.364	1
NF2	Del_5q21.1	0.364	1
Amp_6p21.1	Del_8p22	0.364	1
CRIPAK	PRKDC	0.365	1
CRIPAK	Amp_8p11.23	0.365	1
FAM123B	22q-Del	0.366	1
B2M	12q-Amp	0.366	1
B2M	Del_16q23.1	0.366	1
MLH1	1p-Del	0.366	1
FMN2	PTGDR	0.366	1
FMN2	Del_7q31.1	0.366	1
OR4D10	Del_15q15.2	0.366	1
P2RY13	Del_16q23.1	0.366	1
MVK	Del_15q15.2	0.366	1
DIP2B	Amp_20p11.21	0.366	1
FBXW7	5q-Del	0.366	1
DDX26B	12q-Amp	0.366	1
NAA25	Del_15q15.2	0.366	1
RLIM	Del_15q15.2	0.366	1
PRPS1	Amp_13q22.1	0.366	1
GRB2	20p-Amp	0.366	1
SLK	Amp_16q12.1	0.366	1
Del_6p25.3	Del_15q15.2	0.366	1
CDH1	UBQLN2	0.367	1
ZFP36L2	18p-Del	0.367	1
PIK3R1	Del_14q31.1	0.367	1
CDH1	Del_10q23.31	0.368	1
BMPR2	PCBP1	0.368	1
BMPR2	Del_12p13.2	0.368	1
C11orf30	Del_15q21.1	0.368	1
CYLD	Del_15q21.1	0.368	1
ALPK2	Amp_17p11.2	0.369	1
PIK3R1	Amp_20q11.21	0.369	1
HPS3	Del_18p11.31	0.369	1
GGT1	Del_5q22.2	0.369	1
Amp_17p11.2	Del_5q22.2	0.369	1
ZFP36L2	Amp_20q13.12	0.37	1
KDM6A	Amp_12p13.33	0.37	1
MAPK6	1q-Amp	0.37	1
NF2	8q-Amp	0.37	1
DIP2B	Amp_12p13.33	0.37	1
DIP2B	Del_5q22.2	0.37	1
DIP2B	Del_15q22.33	0.37	1
ZBTB20	Amp_16p11.2	0.37	1
ZBTB20	Del_17q24.3	0.37	1
MPHOSPH10	1q-Amp	0.37	1
PLAGL2	Del_8p23.2	0.37	1
IDH1	1q-Amp	0.37	1
ALDH1A3	1q-Amp	0.37	1
C14orf43	1q-Amp	0.37	1
C14orf184	Del_8p23.2	0.37	1
RHOA	8p-Del	0.371	1
P2RY13	Del_8p22	0.371	1
NR1H3	Del_8p22	0.371	1
PIK3R1	18q-Del	0.371	1
CYSLTR2	Del_8p22	0.371	1
C15orf52	8p-Del	0.371	1
8p-Del	Amp_6p21.1	0.371	1
Amp_8p11.21	Del_15q11.2	0.371	1
CRIPAK	8p-Amp	0.372	1
MAPK6	8p-Amp	0.372	1
FBXW7	8p-Amp	0.372	1
RBMX	HPS3	0.372	1
SETD2	Del_17q24.3	0.372	1
ECT2	8p-Amp	0.372	1
HPS3	Del_3p26.1	0.372	1
RNF43	SMAD2	0.373	1
TP53	SELPLG	0.373	1
ZFP36L2	Del_18q22.1	0.373	1
OR4D10	Del_18q22.1	0.373	1
FBXW7	PTGDR	0.373	1
RBM44	Del_10q23.31	0.373	1
RB1	Del_3p26.1	0.373	1
RB1	Del_5q12.1	0.373	1
RB1	Del_16p13.3	0.373	1
DCLK2	Del_10q23.31	0.373	1
BCORL1	Del_21q11.2	0.373	1
BCORL1	Del_22q13.32	0.373	1
WNT1	Del_22q13.32	0.374	1
ALG12	Amp_20q12	0.374	1
ALG12	Del_21q11.2	0.374	1
ALG12	Del_22q13.32	0.374	1
PTGDR	Del_21q11.2	0.374	1
PTGDR	Del_22q13.32	0.374	1
TMEM126A	Amp_20q12	0.374	1
Amp_11p15.5	Del_15q21.1	0.374	1
SOX9	Del_5q22.2	0.375	1
SOX9	Del_15q22.33	0.375	1
SELPLG	18q-Del	0.375	1
ZBTB20	Del_15q11.2	0.375	1
GRB2	Del_5q21.1	0.375	1
Amp_6p21.1	Del_1p33	0.375	1
ARID1A	THOC7	0.376	1
TXNDC2	14q-Del	0.376	1
ZFP36L2	Amp_17q24.1	0.376	1
SELPLG	BCL9	0.376	1
CRIPAK	Amp_8p11.21	0.376	1
CRIPAK	Amp_8q24.21	0.376	1
MAPK6	Del_8p22	0.376	1
OR4D10	BCORL1	0.376	1
OR4D10	Amp_17q24.1	0.376	1
PRKDC	Del_5q22.2	0.376	1
MVK	Amp_17q24.1	0.376	1
ATXN3L	Del_18p11.31	0.376	1
DIP2B	Amp_20p11.23	0.376	1
MPHOSPH10	Amp_8q24.21	0.376	1
GPATCH8	Amp_17q24.1	0.376	1
C11orf30	Amp_19q13.11	0.376	1
C11orf30	Del_9p21.3	0.376	1
PTEN	Del_7q31.1	0.376	1
NLRC4	1p-Del	0.376	1
C14orf43	Amp_8p11.21	0.376	1
ATP6V1B1	Amp_17q24.1	0.376	1
BCL9	Del_9p21.3	0.376	1
BCL9	Del_19p13.3	0.376	1
NAA25	Amp_17q24.1	0.376	1
CHD3	RLIM	0.376	1
CHD3	17q-Amp	0.376	1
CHD3	1p-Del	0.376	1
ATM	Del_3p26.1	0.376	1
ATM	Del_10q21.1	0.376	1
RLIM	BCORL1	0.376	1
RLIM	Amp_17q24.1	0.376	1
CYLD	Del_19p13.3	0.376	1
BCORL1	17q-Amp	0.376	1
BCORL1	1p-Del	0.376	1
SLK	4p-Del	0.376	1
SLK	Del_3p14.2	0.376	1
12q-Amp	4p-Del	0.376	1
Amp_8p11.23	Del_15q22.33	0.376	1
Amp_17q12	Del_10q25.2	0.376	1
NF2	Del_17q24.3	0.377	1
PLAGL2	Del_15q21.1	0.377	1
ALPK2	Del_4q35.1	0.377	1
ECT2	Del_14q31.1	0.377	1
C14orf184	Del_15q21.1	0.377	1
SETD2	GGT1	0.378	1
SETD2	PRPS1	0.378	1
SETD2	Amp_17p11.2	0.378	1
PTEN	8p-Del	0.378	1
RB1	7p-Amp	0.378	1
GRB2	20q-Amp	0.378	1
PTEN	Del_16p13.3	0.379	1
15q-Del	Amp_11p15.5	0.379	1
PTEN	Amp_6p21.1	0.38	1
PTEN	Del_3q26.31	0.38	1
PTEN	Del_6q26	0.38	1
PTEN	Del_8q11.1	0.38	1
1q-Amp	17p-Del	0.38	1
20p-Amp	Del_3q26.31	0.38	1
20p-Amp	Del_8q11.1	0.38	1
C11orf30	Del_1p36.11	0.381	1
C11orf30	Del_15q15.2	0.381	1
CYLD	Del_15q15.2	0.381	1
ACVR1B	Del_1p33	0.382	1
RB1	Amp_17p11.2	0.382	1
RNF43	Del_7q31.1	0.383	1
B2M	Amp_5p13.2	0.383	1
CDH1	Del_8p23.2	0.383	1
ZFP36L2	Del_18p11.31	0.383	1
RHOA	8q-Amp	0.383	1
P2RY13	Amp_5p13.2	0.383	1
DIP2B	Amp_8q24.21	0.383	1
NR1H3	Amp_5p13.2	0.383	1
DDX26B	Amp_5p13.2	0.383	1
TOP2B	CYSLTR2	0.383	1
C2orf29	7q-Amp	0.383	1
IDH2	7q-Amp	0.383	1
PLXNA3	7q-Amp	0.383	1
C15orf52	8q-Amp	0.383	1
1q-Amp	Del_8p23.2	0.383	1
PLAGL2	Del_1p36.11	0.384	1
PLAGL2	Del_15q15.2	0.384	1
ROS1	Amp_8q24.21	0.384	1
PTCH1	Del_10q21.1	0.384	1
C14orf184	Del_15q15.2	0.384	1
APC	Del_5q12.1	0.385	1
SOX9	EGR1	0.385	1
SOX9	GRB2	0.385	1
SELPLG	Del_4q35.1	0.385	1
SMAD2	Del_4q35.1	0.385	1
ALPK2	Amp_8q24.21	0.385	1
CYSLTR2	17p-Del	0.385	1
GRB2	Amp_20q11.21	0.385	1
FMN2	Del_4q22.1	0.386	1
ROS1	Del_4q22.1	0.386	1
IDH1	15q-Del	0.387	1
C14orf43	15q-Del	0.387	1
SELPLG	Del_18q21.2	0.388	1
OR4D10	14q-Del	0.388	1
ASXL1	ATG5	0.388	1
ASXL1	Amp_17p11.2	0.388	1
RPTN	4q-Del	0.388	1
14q-Del	Del_6p25.3	0.388	1
BCOR	Amp_6p21.1	0.389	1
KDM6A	RHOA	0.389	1
KDM6A	Amp_6p21.1	0.389	1
KDM6A	Del_3q26.31	0.389	1
KDM6A	Del_6q26	0.389	1
KDM6A	Del_8q11.1	0.389	1
RHOA	DIP2B	0.389	1
FMN2	12q-Amp	0.389	1
FMN2	Del_16q23.1	0.389	1
DIP2B	Del_8q11.1	0.389	1
ROS1	Del_10q25.2	0.389	1
ALDH1A3	8p-Del	0.389	1
NLRC4	Del_5q12.1	0.389	1
CHD3	Del_5q12.1	0.389	1
BCORL1	Del_5q12.1	0.389	1
TP53	Del_1p36.11	0.39	1
MLH1	Del_1p33	0.39	1
CRIPAK	ECT2	0.39	1
MPHOSPH10	Del_17q24.3	0.39	1
IDH1	ECT2	0.39	1
IDH1	Amp_16p11.2	0.39	1
IDH1	Del_17q24.3	0.39	1
ECT2	Del_17q24.3	0.39	1
ALDH1A3	Amp_16p11.2	0.39	1
ALDH1A3	Del_17q24.3	0.39	1
C14orf43	Amp_16p11.2	0.39	1
C14orf43	Del_17q24.3	0.39	1
Amp_11p15.5	Del_15q15.2	0.39	1
NTAN1	4p-Del	0.391	1
NTAN1	Amp_17q12	0.391	1
NTAN1	Del_3p14.2	0.391	1
RHOA	Del_15q11.2	0.391	1
ATXN3L	Amp_12p13.33	0.391	1
ATXN3L	Del_5q22.2	0.391	1
RBMX	Del_15q22.33	0.391	1
ALG12	20q-Amp	0.391	1
ZBTB20	Del_3p26.1	0.391	1
ZBTB20	Del_10q21.1	0.391	1
ZBTB20	Del_16p13.3	0.391	1
TPRKB	21q-Del	0.391	1
TPRKB	4p-Del	0.391	1
TPRKB	Amp_17q12	0.391	1
TPRKB	Del_3p14.2	0.391	1
THOC7	21q-Del	0.391	1
THOC7	Amp_17q12	0.391	1
THOC7	Del_3p14.2	0.391	1
UBQLN2	4p-Del	0.391	1
UBQLN2	Amp_17q12	0.391	1
GMPS	1q-Amp	0.391	1
GMPS	Amp_12p13.33	0.391	1
KIAA1586	21q-Del	0.391	1
KIAA1586	4p-Del	0.391	1
KIAA1586	Amp_17q12	0.391	1
L1TD1	1q-Amp	0.391	1
L1TD1	Amp_12p13.33	0.391	1
LINGO4	4p-Del	0.391	1
IQCD	Amp_17q12	0.391	1
PLEKHF2	Amp_17q12	0.391	1
ATM	5q-Del	0.391	1
FKBP9	Amp_12p13.33	0.391	1
FKBP9	Del_5q22.2	0.391	1
FKBP9	Del_15q22.33	0.391	1
MAP4K3	1q-Amp	0.391	1
KCTD3	Del_5q22.2	0.391	1
IDH2	1q-Amp	0.391	1
IDH2	Del_5q22.2	0.391	1
PLXNA3	Amp_12p13.33	0.391	1
PCBP1	4p-Del	0.391	1
PCBP1	Amp_17q12	0.391	1
Amp_6p21.1	Del_15q11.2	0.391	1
Amp_12p13.33	Del_3p26.1	0.391	1
WNT1	Del_4q35.1	0.392	1
OR4D10	12q-Amp	0.392	1
OR4D10	Del_10q25.2	0.392	1
MVK	Del_10q25.2	0.392	1
ALG12	Del_4q35.1	0.392	1
GPATCH8	Del_10q25.2	0.392	1
ATP6V1B1	Del_10q25.2	0.392	1
RLIM	Del_10q25.2	0.392	1
RLIM	Del_16q23.1	0.392	1
PTGDR	Del_4q35.1	0.392	1
SLK	17q-Amp	0.392	1
SLK	1p-Del	0.392	1
12q-Amp	1p-Del	0.392	1
12q-Amp	Del_6p25.3	0.392	1
17q-Amp	Del_10q25.2	0.392	1
17q-Amp	Del_16q23.1	0.392	1
SOX9	NF2	0.393	1
EGR1	SMAD4	0.393	1
CTNNB1	4q-Del	0.393	1
PTGDR	17p-Del	0.393	1
RHOA	Amp_20q13.12	0.395	1
STARD3NL	Amp_8p11.21	0.395	1
NF2	Del_5q22.2	0.395	1
DCLK2	Amp_8p11.21	0.395	1
HPS3	Amp_19q13.11	0.395	1
HPS3	Del_9p21.3	0.395	1
HPS3	Del_19p13.3	0.395	1
Amp_20q13.12	Del_6q26	0.395	1
TXNDC2	Del_8p23.2	0.396	1
IDH1	20p-Amp	0.396	1
SLC26A8	8q-Amp	0.396	1
13q-Amp	Amp_6p21.1	0.396	1
APC	SMAD2	0.397	1
APC	SLC26A8	0.397	1
B2M	Del_21q11.2	0.397	1
MLH1	Del_5q22.2	0.397	1
P2RY13	Del_22q13.32	0.397	1
ALG12	Amp_20q11.21	0.397	1
NR1H3	Del_21q11.2	0.397	1
RPTN	Del_15q21.1	0.397	1
DDX26B	Del_21q11.2	0.397	1
DDX26B	Del_22q13.32	0.397	1
DCLK2	Del_15q21.1	0.397	1
CYSLTR2	Del_22q13.32	0.397	1
TMEM126A	Amp_20q11.21	0.397	1
Amp_16q12.1	Del_22q13.32	0.397	1
RNF43	21q-Del	0.398	1
RNF43	Del_3p14.2	0.398	1
ATG5	22q-Del	0.398	1
PRPS1	22q-Del	0.398	1
PRPS1	Del_4q22.1	0.398	1
22q-Del	Amp_17p11.2	0.398	1
Amp_17p11.2	Del_4q22.1	0.398	1
FAM123B	Del_15q15.2	0.399	1
PLAGL2	14q-Del	0.399	1
C14orf184	14q-Del	0.399	1
PTGDR	Del_18q12.2	0.399	1
Amp_8p11.23	Del_1p36.11	0.399	1
Del_7q31.1	Del_18q12.2	0.399	1
RHOA	7p-Amp	0.4	1
TXNDC2	Amp_17q12	0.401	1
MAPK6	Del_4q22.1	0.401	1
MGA	1q-Amp	0.401	1
NR1H3	C11orf30	0.401	1
NR1H3	BCL9	0.401	1
C11orf30	Amp_16q12.1	0.401	1
CTNNB1	15q-Del	0.401	1
ECT2	Del_4q22.1	0.401	1
ALDH1A3	Del_4q22.1	0.401	1
C14orf43	22q-Del	0.401	1
C14orf43	Del_4q22.1	0.401	1
BCL9	Amp_16q12.1	0.401	1
RB1	Amp_12p13.33	0.402	1
ACVR1B	C15orf52	0.403	1
ACVR1B	Amp_6p21.1	0.403	1
ACVR1B	Del_6q26	0.403	1
ACVR1B	Del_8q11.1	0.403	1
HPS3	Del_15q21.1	0.403	1
C15orf52	Del_10q23.31	0.403	1
Amp_6p21.1	Del_10q23.31	0.403	1
CDH1	Amp_13q22.1	0.404	1
STARD3NL	Amp_13q12.13	0.404	1
STARD3NL	Amp_17q24.1	0.404	1
PRKDC	8p-Amp	0.404	1
PLAGL2	Amp_20p11.23	0.404	1
SETD2	Amp_8p11.23	0.404	1
RBM44	Amp_17q24.1	0.404	1
RB1	4q-Del	0.404	1
DCLK2	Amp_13q12.13	0.404	1
DCLK2	Amp_17q24.1	0.404	1
SMAD4	Amp_11p15.5	0.404	1
12q-Amp	Del_21q11.2	0.404	1
ATXN3L	8p-Amp	0.405	1
DIP2B	Del_15q21.1	0.405	1
RBMX	SETD2	0.405	1
ASXL1	Amp_8p11.21	0.405	1
SETD2	IDH2	0.405	1
SETD2	Del_10q21.1	0.405	1
L1TD1	8p-Amp	0.405	1
NLRC4	Del_4q35.1	0.405	1
C2orf29	8p-Amp	0.405	1
FKBP9	8p-Amp	0.405	1
KCTD3	8p-Amp	0.405	1
BCORL1	Del_4q35.1	0.405	1
IDH2	8p-Amp	0.405	1
8p-Amp	Del_3p26.1	0.405	1
8p-Amp	Del_10q21.1	0.405	1
SOX9	Del_5q12.1	0.406	1
FAM123B	Amp_5p13.2	0.406	1
SELPLG	Del_18q22.1	0.406	1
DIP2B	15q-Del	0.406	1
PTEN	Amp_17q24.1	0.406	1
CDH1	4q-Del	0.407	1
PRKDC	Del_10q21.1	0.407	1
ATXN3L	Amp_8p11.23	0.407	1
GMPS	Amp_8p11.23	0.407	1
FKBP9	Amp_8p11.23	0.407	1
16p-Amp	Amp_11p15.5	0.407	1
16p-Amp	Del_1p33	0.407	1
5q-Del	Amp_11p15.5	0.407	1
Amp_8p11.23	Del_3p26.1	0.407	1
FAM123B	Del_4q35.1	0.408	1
PRKDC	Del_16q23.1	0.408	1
RPTN	Del_15q15.2	0.408	1
DCLK2	Del_1p36.11	0.408	1
DCLK2	Del_15q15.2	0.408	1
CHD3	Del_1p13.1	0.408	1
BCORL1	Del_1p13.1	0.408	1
SLK	Amp_8p11.23	0.408	1
SMAD4	Del_1p36.11	0.408	1
SMAD4	Del_15q15.2	0.408	1
TXNDC2	ZFP36L2	0.409	1
TXNDC2	17q-Amp	0.409	1
TXNDC2	1p-Del	0.409	1
TXNDC2	Del_6p25.3	0.409	1
OR4D10	Amp_5p13.2	0.409	1
MVK	Amp_5p13.2	0.409	1
TOP2B	17q-Amp	0.409	1
TOP2B	1p-Del	0.409	1
NAA25	Amp_5p13.2	0.409	1
1p-Del	Amp_5p13.2	0.409	1
HPS3	Del_17p12	0.41	1
Del_16q23.1	Del_18q22.1	0.411	1
FAM123B	MVK	0.412	1
FAM123B	ATP6V1B1	0.412	1
MAPK6	KCTD3	0.412	1
MAPK6	Del_3p26.1	0.412	1
MAPK6	Del_10q21.1	0.412	1
ATXN3L	MPHOSPH10	0.412	1
ATXN3L	Amp_16p11.2	0.412	1
SMAD2	PIK3R1	0.412	1
MPHOSPH10	C2orf29	0.412	1
MPHOSPH10	MAP4K3	0.412	1
MPHOSPH10	IDH2	0.412	1
MPHOSPH10	Del_3p26.1	0.412	1
MPHOSPH10	Del_10q21.1	0.412	1
MPHOSPH10	Del_16p13.3	0.412	1
IDH1	L1TD1	0.412	1
IDH1	Del_10q21.1	0.412	1
IDH1	Del_16p13.3	0.412	1
ECT2	GMPS	0.412	1
ECT2	Del_3p26.1	0.412	1
ECT2	Del_10q21.1	0.412	1
ALDH1A3	Del_3p26.1	0.412	1
ALDH1A3	Del_10q21.1	0.412	1
GMPS	Amp_16p11.2	0.412	1
GMPS	Del_17q24.3	0.412	1
L1TD1	Amp_16p11.2	0.412	1
L1TD1	Del_17q24.3	0.412	1
C2orf29	Amp_16p11.2	0.412	1
C2orf29	Del_17q24.3	0.412	1
C14orf43	Del_3p26.1	0.412	1
C14orf43	Del_10q21.1	0.412	1
C14orf43	Del_16p13.3	0.412	1
PIK3R1	Amp_19q13.11	0.412	1
PIK3R1	Del_9p21.3	0.412	1
PIK3R1	Del_19p13.3	0.412	1
FKBP9	Amp_16p11.2	0.412	1
MAP4K3	Amp_16p11.2	0.412	1
KCTD3	Amp_16p11.2	0.412	1
KCTD3	Del_17q24.3	0.412	1
IDH2	Amp_16p11.2	0.412	1
IDH2	Del_17q24.3	0.412	1
PLXNA3	Amp_16p11.2	0.412	1
PLXNA3	Del_17q24.3	0.412	1
C15orf52	SMAD4	0.412	1
SMAD4	Del_3q26.31	0.412	1
SMAD4	Del_8q11.1	0.412	1
Amp_16p11.2	Del_10q21.1	0.412	1
PIK3R1	14q-Del	0.413	1
12q-Amp	Del_5q12.1	0.413	1
ZBTB20	Amp_19q13.11	0.414	1
ZBTB20	Del_9p21.3	0.414	1
ZBTB20	Del_19p13.3	0.414	1
MPHOSPH10	Del_15q11.2	0.414	1
ALPK2	8p-Del	0.414	1
ECT2	Del_15q11.2	0.414	1
SLC26A8	1q-Amp	0.414	1
CYLD	Amp_13q12.13	0.414	1
1q-Amp	Del_9p21.3	0.414	1
Amp_16p11.2	Del_15q11.2	0.414	1
MGA	Del_4q22.1	0.415	1
NTAN1	Del_5q12.1	0.416	1
CRIPAK	Del_18q21.2	0.416	1
NF1	Amp_19q13.11	0.416	1
NF1	Del_9p21.3	0.416	1
SMAD2	7p-Amp	0.416	1
TPRKB	Del_5q12.1	0.416	1
IDH1	Del_18q21.2	0.416	1
ECT2	13q-Amp	0.416	1
UBQLN2	Del_5q12.1	0.416	1
KIAA1586	Del_5q12.1	0.416	1
LINGO4	Del_5q12.1	0.416	1
PLEKHF2	Del_5q12.1	0.416	1
PCBP1	Del_5q12.1	0.416	1
SOX9	ZBTB20	0.417	1
SOX9	15q-Del	0.417	1
TXNDC2	Del_18q12.2	0.417	1
HPS3	Del_1p36.11	0.417	1
HPS3	Del_15q15.2	0.417	1
Amp_8p11.21	Del_1p36.11	0.417	1
ZFP36L2	Del_17p12	0.418	1
RHOA	4q-Del	0.418	1
NF2	Del_8p22	0.418	1
GGT1	Del_5q21.1	0.418	1
ATG5	Del_5q21.1	0.418	1
C15orf52	4q-Del	0.418	1
4q-Del	Amp_6p21.1	0.418	1
Amp_17p11.2	Del_5q21.1	0.418	1
CDH1	15q-Del	0.419	1
WNT1	Del_5q22.2	0.419	1
WNT1	Del_15q22.33	0.419	1
NF2	FKBP9	0.419	1
FBXW7	NAA25	0.419	1
FBXW7	1p-Del	0.419	1
FBXW7	Del_6p25.3	0.419	1
ASXL1	Del_16p13.3	0.419	1
ALG12	Del_15q22.33	0.419	1
FKBP9	15q-Del	0.419	1
HPS3	Amp_16q12.1	0.419	1
PTGDR	Amp_12p13.33	0.419	1
IDH2	Del_14q31.1	0.419	1
TMEM126A	Amp_12p13.33	0.419	1
15q-Del	Del_16p13.3	0.419	1
Del_5q22.2	Del_7q31.1	0.419	1
STARD3NL	12q-Amp	0.42	1
STARD3NL	Del_16q23.1	0.42	1
RPTN	Del_10q25.2	0.42	1
RPTN	Del_16q23.1	0.42	1
RBM44	Del_10q25.2	0.42	1
DCLK2	Del_10q25.2	0.42	1
DCLK2	Del_16q23.1	0.42	1
PTCH1	Del_5q22.2	0.42	1
Amp_6p21.1	Del_8p23.2	0.42	1
Amp_8q24.21	Del_15q11.2	0.42	1
APC	WNT1	0.421	1
BCOR	5q-Del	0.421	1
KDM6A	16p-Amp	0.421	1
KDM6A	5q-Del	0.421	1
STARD3NL	Amp_13q22.1	0.421	1
DIP2B	5q-Del	0.421	1
DIP2B	Del_1p36.11	0.421	1
DIP2B	Del_15q15.2	0.421	1
ROS1	Amp_5p13.2	0.421	1
PIK3R1	Amp_12p13.33	0.421	1
PIK3R1	Del_5q22.2	0.421	1
NF2	Del_1p36.11	0.422	1
P2RY13	Del_4q35.1	0.422	1
CYLD	13q-Amp	0.422	1
CYSLTR2	Del_4q35.1	0.422	1
PCBP1	18q-Del	0.422	1
PCBP1	Amp_20p11.21	0.422	1
SLK	Del_14q31.1	0.422	1
FMN2	Del_1p36.11	0.423	1
PTEN	1p-Del	0.423	1
8p-Amp	Del_15q15.2	0.423	1
NF2	8p-Amp	0.424	1
DIP2B	Del_4q22.1	0.424	1
ASXL1	Del_4q35.1	0.424	1
ROS1	1p-Del	0.424	1
SMAD4	Del_5q21.1	0.424	1
ACVR1B	Del_10q23.31	0.425	1
SMAD4	Amp_13q22.1	0.425	1
BCOR	4q-Del	0.426	1
ZFP36L2	C11orf30	0.426	1
SELPLG	Amp_12p13.33	0.426	1
SELPLG	Del_5q22.2	0.426	1
ATXN3L	Amp_8p11.21	0.426	1
DIP2B	4q-Del	0.426	1
IDH1	Amp_20p11.21	0.426	1
C11orf30	1p-Del	0.426	1
GMPS	Amp_8p11.21	0.426	1
C2orf29	Amp_8p11.21	0.426	1
PIK3R1	Del_17p12	0.426	1
ATP6V1B1	CYLD	0.426	1
BCL9	17q-Amp	0.426	1
BCL9	1p-Del	0.426	1
CYLD	1p-Del	0.426	1
MAP4K3	Amp_8p11.21	0.426	1
4q-Del	Amp_12p13.33	0.426	1
Amp_12p13.33	Del_9p21.3	0.426	1
Del_5q22.2	Del_9p21.3	0.426	1
ACVR1B	Amp_20p11.23	0.427	1
RB1	Amp_19q13.11	0.427	1
SETD2	TMEM126A	0.428	1
C11orf30	Amp_17q12	0.428	1
CTNNB1	17q-Amp	0.428	1
NLRC4	Del_1p33	0.428	1
BCL9	Del_3p14.2	0.428	1
CHD3	Del_1p33	0.428	1
CYLD	4p-Del	0.428	1
CYLD	Amp_17q12	0.428	1
BCORL1	Amp_11p15.5	0.428	1
BCORL1	Del_1p33	0.428	1
8p-Amp	18p-Del	0.428	1
8p-Amp	Del_7q31.1	0.428	1
SOX9	Amp_17p11.2	0.429	1
NTAN1	Del_1p13.1	0.429	1
ZFP36L2	Amp_20q12	0.429	1
TPRKB	Amp_13q12.13	0.429	1
TPRKB	Del_1p13.1	0.429	1
KIAA1586	Del_1p13.1	0.429	1
IQCD	Del_1p13.1	0.429	1
BCORL1	Del_15q11.2	0.429	1
PCBP1	Del_1p13.1	0.429	1
SETD2	Amp_8q24.21	0.43	1
STARD3NL	14q-Del	0.431	1
RBMX	8p-Del	0.431	1
PLAGL2	Del_22q13.32	0.431	1
EGR1	4p-Del	0.431	1
RPTN	14q-Del	0.431	1
DCLK2	14q-Del	0.431	1
C14orf184	Del_21q11.2	0.431	1
FKBP9	8p-Del	0.431	1
GRB2	21q-Del	0.431	1
GRB2	4p-Del	0.431	1
GRB2	Amp_17q12	0.431	1
8p-Del	Del_3p26.1	0.431	1
MAPK6	Del_5q21.1	0.432	1
MGA	Del_17q24.3	0.432	1
IDH1	Del_5q21.1	0.432	1
ALDH1A3	Del_5q21.1	0.432	1
RB1	Del_5q21.1	0.432	1
C14orf43	Del_5q21.1	0.432	1
SLK	Del_1p13.1	0.432	1
Amp_16p11.2	Del_5q21.1	0.432	1
RHOA	Amp_17q24.1	0.433	1
ATXN3L	RBMX	0.433	1
ATXN3L	Amp_20q13.12	0.433	1
ATXN3L	Del_3p26.1	0.433	1
RBMX	C2orf29	0.433	1
RBMX	Del_3p26.1	0.433	1
RBMX	Del_16p13.3	0.433	1
ASXL1	Del_10q23.31	0.433	1
GMPS	IDH2	0.433	1
GMPS	PLXNA3	0.433	1
GMPS	Del_3p26.1	0.433	1
GMPS	Del_10q21.1	0.433	1
L1TD1	IDH2	0.433	1
L1TD1	Del_3p26.1	0.433	1
L1TD1	Del_10q21.1	0.433	1
L1TD1	Del_16p13.3	0.433	1
NLRC4	Del_6q26	0.433	1
NLRC4	Del_8q11.1	0.433	1
C2orf29	IDH2	0.433	1
C2orf29	Del_3p26.1	0.433	1
C2orf29	Del_10q21.1	0.433	1
CHD3	Amp_6p21.1	0.433	1
CHD3	Del_3q26.31	0.433	1
CHD3	Del_6q26	0.433	1
CHD3	Del_8q11.1	0.433	1
FKBP9	Del_3p26.1	0.433	1
MAP4K3	Del_3p26.1	0.433	1
MAP4K3	Del_16p13.3	0.433	1
KCTD3	Del_3p26.1	0.433	1
KCTD3	Del_10q21.1	0.433	1
KCTD3	Del_16p13.3	0.433	1
BCORL1	Del_6q26	0.433	1
BCORL1	Del_8q11.1	0.433	1
IDH2	Amp_20q13.12	0.433	1
IDH2	Del_3p26.1	0.433	1
IDH2	Del_16p13.3	0.433	1
PLXNA3	Del_3p26.1	0.433	1
PLXNA3	Del_10q21.1	0.433	1
PLXNA3	Del_16p13.3	0.433	1
C15orf52	Amp_17q24.1	0.433	1
SELPLG	CRIPAK	0.434	1
SELPLG	IDH1	0.434	1
SELPLG	ECT2	0.434	1
SELPLG	ALDH1A3	0.434	1
SELPLG	Amp_16p11.2	0.434	1
SELPLG	Del_17q24.3	0.434	1
CRIPAK	Amp_19q13.11	0.434	1
CRIPAK	Del_9p21.3	0.434	1
MAPK6	Amp_19q13.11	0.434	1
MAPK6	Del_9p21.3	0.434	1
MAPK6	Del_19p13.3	0.434	1
RBMX	22q-Del	0.434	1
RBMX	Del_4q22.1	0.434	1
MPHOSPH10	Del_9p21.3	0.434	1
MPHOSPH10	Del_19p13.3	0.434	1
IDH1	Amp_19q13.11	0.434	1
IDH1	Del_9p21.3	0.434	1
IDH1	Del_19p13.3	0.434	1
CTNNB1	22q-Del	0.434	1
ECT2	Amp_19q13.11	0.434	1
ECT2	Del_19p13.3	0.434	1
ALDH1A3	Amp_19q13.11	0.434	1
ALDH1A3	Del_9p21.3	0.434	1
ALDH1A3	Del_19p13.3	0.434	1
L1TD1	Del_4q22.1	0.434	1
C2orf29	22q-Del	0.434	1
C14orf43	Amp_19q13.11	0.434	1
C14orf43	Del_9p21.3	0.434	1
C14orf43	Del_19p13.3	0.434	1
SLC26A8	Amp_16p11.2	0.434	1
SLC26A8	Del_17q24.3	0.434	1
Amp_16p11.2	Amp_19q13.11	0.434	1
ACVR1B	16p-Amp	0.435	1
ACVR1B	5q-Del	0.435	1
CRIPAK	17p-Del	0.435	1
P2RY13	Del_8p23.2	0.435	1
NR1H3	Del_8p23.2	0.435	1
ECT2	17p-Del	0.435	1
4p-Del	Amp_8q24.21	0.435	1
TXNDC2	Del_22q13.32	0.436	1
ACVR1B	PTEN	0.436	1
CRIPAK	Amp_13q12.13	0.436	1
STARD3NL	Amp_5p13.2	0.436	1
NF1	Amp_17q24.1	0.436	1
OR4D10	Del_22q13.32	0.436	1
GPATCH8	Del_21q11.2	0.436	1
RPTN	Amp_5p13.2	0.436	1
PTEN	Del_10q23.31	0.436	1
RBM44	Amp_5p13.2	0.436	1
ECT2	Amp_13q12.13	0.436	1
NLRC4	7p-Amp	0.436	1
DCLK2	Amp_5p13.2	0.436	1
PIK3R1	Del_18q21.2	0.436	1
ATP6V1B1	Del_22q13.32	0.436	1
RLIM	Del_22q13.32	0.436	1
BCORL1	7p-Amp	0.436	1
SLK	Del_4q35.1	0.436	1
SMAD4	Amp_20p11.23	0.436	1
Amp_11p15.5	Del_5q21.1	0.436	1
WNT1	ASXL1	0.437	1
WNT1	15q-Del	0.437	1
ASXL1	TMEM126A	0.437	1
ALG12	15q-Del	0.437	1
B2M	1q-Amp	0.438	1
P2RY13	1q-Amp	0.438	1
ZBTB20	CYSLTR2	0.438	1
TPRKB	7q-Amp	0.438	1
THOC7	7q-Amp	0.438	1
TOP2B	Del_5q12.1	0.438	1
PLEKHF2	7q-Amp	0.438	1
PCBP1	7q-Amp	0.438	1
FBXW7	THOC7	0.439	1
FBXW7	PCBP1	0.439	1
Amp_8q24.21	Del_10q23.31	0.439	1
WNT1	8q-Amp	0.44	1
FBXW7	21q-Del	0.44	1
SETD2	Amp_19q13.11	0.44	1
8p-Amp	Del_9p21.3	0.44	1
8p-Amp	Del_19p13.3	0.44	1
ARID1A	Del_4q35.1	0.441	1
ZBTB20	Del_15q21.1	0.441	1
1q-Amp	Del_15q21.1	0.441	1
22q-Del	Amp_8p11.21	0.441	1
Amp_8p11.21	Del_4q22.1	0.441	1
TP53	EGR1	0.442	1
TP53	GRB2	0.442	1
NTAN1	Amp_11p15.5	0.442	1
NTAN1	Del_1p33	0.442	1
TPRKB	Amp_11p15.5	0.442	1
TPRKB	Del_1p33	0.442	1
THOC7	Amp_11p15.5	0.442	1
THOC7	Del_1p33	0.442	1
UBQLN2	Amp_11p15.5	0.442	1
UBQLN2	Del_1p33	0.442	1
KIAA1586	Amp_11p15.5	0.442	1
KIAA1586	Del_1p33	0.442	1
LINGO4	Del_1p33	0.442	1
IQCD	Amp_11p15.5	0.442	1
IQCD	Del_1p33	0.442	1
HPS3	Del_8p22	0.442	1
PCBP1	Amp_11p15.5	0.442	1
PCBP1	Del_1p33	0.442	1
Amp_8p11.23	Amp_11p15.5	0.442	1
PRKDC	Amp_8p11.23	0.443	1
GMPS	Amp_8q24.21	0.443	1
MAP4K3	Amp_8q24.21	0.443	1
PLXNA3	Amp_8q24.21	0.443	1
C15orf52	Del_15q21.1	0.443	1
7p-Amp	Amp_11p15.5	0.443	1
7p-Amp	Del_1p33	0.443	1
Amp_6p21.1	Del_15q21.1	0.443	1
ZFP36L2	Amp_8q24.21	0.444	1
ZFP36L2	Del_8p22	0.444	1
MVK	Amp_8q24.21	0.444	1
THOC7	Amp_13q22.1	0.444	1
PCBP1	Amp_13q22.1	0.444	1
SMAD4	13q-Amp	0.444	1
1p-Del	Amp_8q24.21	0.444	1
Amp_20p11.23	Del_1p13.1	0.444	1
Del_6p25.3	Del_8p22	0.444	1
HPS3	17q-Amp	0.445	1
HPS3	1p-Del	0.445	1
4p-Del	Amp_17q12	0.445	1
MAPK6	Del_8p23.2	0.446	1
RPTN	18p-Del	0.446	1
TXNDC2	Amp_8p11.23	0.447	1
CDH1	CHD3	0.447	1
CDH1	BCORL1	0.447	1
ZFP36L2	17p-Del	0.447	1
WNT1	22q-Del	0.447	1
WNT1	Del_4q22.1	0.447	1
PRKDC	Amp_5p13.2	0.447	1
ALG12	22q-Del	0.447	1
ALG12	Del_4q22.1	0.447	1
TOP2B	Amp_8p11.23	0.447	1
PTGDR	22q-Del	0.447	1
APC	FKBP9	0.448	1
APC	KCTD3	0.448	1
APC	IDH2	0.448	1
SOX9	ECT2	0.448	1
SOX9	ALDH1A3	0.448	1
SOX9	Amp_16p11.2	0.448	1
SMAD2	ATM	0.448	1
PLAGL2	Del_4q35.1	0.448	1
ARID1A	1p-Del	0.449	1
KDM6A	Amp_17q24.1	0.449	1
RHOA	SLK	0.449	1
NF1	Amp_17q12	0.449	1
C15orf52	12q-Amp	0.449	1
C15orf52	Del_10q25.2	0.449	1
SLK	Del_3q26.31	0.449	1
SLK	Del_6q26	0.449	1
SLK	Del_8q11.1	0.449	1
12q-Amp	Del_3q26.31	0.449	1
12q-Amp	Del_6q26	0.449	1
12q-Amp	Del_8q11.1	0.449	1
16p-Amp	8q-Amp	0.449	1
Amp_6p21.1	Del_10q25.2	0.449	1
Amp_6p21.1	Del_16q23.1	0.449	1
Del_3q26.31	Del_16q23.1	0.449	1
TP53	FAM123B	0.45	1
TP53	8p-Amp	0.451	1
BMPR2	GGT1	0.451	1
BMPR2	Amp_17p11.2	0.451	1
PRKDC	Del_9p21.3	0.451	1
ACVR1B	Del_4q22.1	0.452	1
SLK	Del_1p33	0.452	1
Amp_11p15.5	Del_16q23.1	0.452	1
APC	Amp_5p13.2	0.453	1
CDH1	Del_15q21.1	0.453	1
MLH1	C15orf52	0.454	1
MLH1	Amp_6p21.1	0.454	1
MLH1	Del_3q26.31	0.454	1
MLH1	Del_8q11.1	0.454	1
WNT1	7p-Amp	0.454	1
RHOA	Del_1p36.11	0.454	1
RHOA	Del_15q15.2	0.454	1
ASXL1	Del_19p13.3	0.454	1
ALG12	7p-Amp	0.454	1
ALG12	Amp_20p11.21	0.454	1
NR1H3	8q-Amp	0.454	1
CYSLTR2	8q-Amp	0.454	1
PTGDR	18q-Del	0.454	1
PTGDR	Amp_20p11.21	0.454	1
1q-Amp	Del_15q15.2	0.454	1
1q-Amp	Del_18q12.2	0.454	1
18q-Del	Del_7q31.1	0.454	1
Amp_6p21.1	Del_1p36.11	0.454	1
Amp_6p21.1	Del_15q15.2	0.454	1
SELPLG	L1TD1	0.455	1
SELPLG	PLXNA3	0.455	1
SELPLG	Del_3p26.1	0.455	1
ATXN3L	SLC26A8	0.455	1
ATXN3L	Amp_19q13.11	0.455	1
RBMX	Amp_19q13.11	0.455	1
RBMX	Del_9p21.3	0.455	1
RBMX	Del_19p13.3	0.455	1
SMAD2	Del_3p26.1	0.455	1
SMAD2	Del_10q21.1	0.455	1
SMAD2	Del_16p13.3	0.455	1
EGR1	Del_5q12.1	0.455	1
GMPS	Amp_19q13.11	0.455	1
GMPS	Del_9p21.3	0.455	1
GMPS	Del_19p13.3	0.455	1
L1TD1	Amp_19q13.11	0.455	1
L1TD1	Del_19p13.3	0.455	1
C2orf29	Amp_19q13.11	0.455	1
SLC26A8	IDH2	0.455	1
SLC26A8	Del_3p26.1	0.455	1
SLC26A8	Del_16p13.3	0.455	1
FKBP9	Amp_19q13.11	0.455	1
FKBP9	Del_19p13.3	0.455	1
CYLD	Del_8p23.2	0.455	1
MAP4K3	Amp_19q13.11	0.455	1
MAP4K3	Del_9p21.3	0.455	1
KCTD3	Amp_19q13.11	0.455	1
KCTD3	Del_9p21.3	0.455	1
KCTD3	Del_19p13.3	0.455	1
IDH2	Amp_19q13.11	0.455	1
IDH2	Del_9p21.3	0.455	1
GRB2	Del_5q12.1	0.455	1
PLXNA3	Del_9p21.3	0.455	1
PLXNA3	Del_19p13.3	0.455	1
Amp_8p11.21	Del_3q26.31	0.455	1
Amp_8p11.21	Del_6q26	0.455	1
Amp_8p11.21	Del_8q11.1	0.455	1
Amp_19q13.11	Del_3p26.1	0.455	1
SOX9	Amp_11p15.5	0.456	1
BCOR	PCBP1	0.456	1
BCOR	Del_12p13.2	0.456	1
CRIPAK	Amp_13q22.1	0.456	1
KDM6A	THOC7	0.456	1
KDM6A	LINGO4	0.456	1
KDM6A	IQCD	0.456	1
KDM6A	Del_12p13.2	0.456	1
ATXN3L	Del_15q11.2	0.456	1
DIP2B	PCBP1	0.456	1
DIP2B	Del_12p13.2	0.456	1
KIAA1586	Amp_8p11.23	0.456	1
NLRC4	Amp_12p13.33	0.456	1
NLRC4	Del_15q22.33	0.456	1
C2orf29	Del_15q11.2	0.456	1
PIK3R1	21q-Del	0.456	1
PIK3R1	Amp_17q12	0.456	1
CHD3	Del_5q22.2	0.456	1
FKBP9	Del_15q11.2	0.456	1
HPS3	21q-Del	0.456	1
PCBP1	Amp_8p11.23	0.456	1
Amp_17q24.1	Del_5q22.2	0.456	1
Amp_17q24.1	Del_15q22.33	0.456	1
C14orf184	Del_18q21.2	0.457	1
Del_6p25.3	Del_18q12.2	0.457	1
TXNDC2	Del_1p13.1	0.458	1
B2M	CRIPAK	0.458	1
B2M	IDH1	0.458	1
B2M	Amp_16p11.2	0.458	1
B2M	Del_17q24.3	0.458	1
CRIPAK	NR1H3	0.458	1
CRIPAK	CYSLTR2	0.458	1
MAPK6	Amp_16q12.1	0.458	1
P2RY13	Amp_16p11.2	0.458	1
NR1H3	MPHOSPH10	0.458	1
NR1H3	IDH1	0.458	1
NR1H3	Amp_16p11.2	0.458	1
MPHOSPH10	Amp_16q12.1	0.458	1
IDH1	DDX26B	0.458	1
IDH1	CYSLTR2	0.458	1
IDH1	Amp_16q12.1	0.458	1
DDX26B	Amp_16p11.2	0.458	1
DDX26B	Del_17q24.3	0.458	1
ALDH1A3	CYSLTR2	0.458	1
C14orf43	Amp_16q12.1	0.458	1
GGT1	20p-Amp	0.458	1
CYSLTR2	Amp_16p11.2	0.458	1
CYSLTR2	Del_17q24.3	0.458	1
PRPS1	20p-Amp	0.458	1
Amp_5p13.2	Del_1p13.1	0.458	1
PRPS1	Amp_20q13.12	0.459	1
SMAD4	8p-Del	0.459	1
8q-Amp	Del_10q25.2	0.459	1
APC	Del_3p14.2	0.46	1
DIP2B	8q-Amp	0.46	1
CYLD	7q-Amp	0.46	1
GRB2	Del_18q12.2	0.46	1
NF2	Amp_5p13.2	0.461	1
CTNNB1	Del_1p36.11	0.461	1
RB1	Del_7q31.1	0.461	1
CYSLTR2	Amp_13q12.13	0.461	1
BMPR2	Amp_8p11.21	0.462	1
OR4D10	20p-Amp	0.462	1
GPATCH8	Del_4q35.1	0.462	1
ATP6V1B1	Del_4q35.1	0.462	1
NAA25	Del_4q35.1	0.462	1
RLIM	Del_4q35.1	0.462	1
20p-Amp	1p-Del	0.462	1
Del_4q35.1	Del_6p25.3	0.462	1
B2M	Amp_12p13.33	0.463	1
ZFP36L2	Amp_20q11.21	0.463	1
KDM6A	Del_5q21.1	0.463	1
OR4D10	ZBTB20	0.463	1
OR4D10	1q-Amp	0.463	1
DIP2B	Del_5q21.1	0.463	1
ZBTB20	17q-Amp	0.463	1
ZBTB20	1p-Del	0.463	1
TPRKB	17p-Del	0.463	1
GPATCH8	1q-Amp	0.463	1
ALPK2	Amp_16q12.1	0.463	1
RPTN	Del_18p11.31	0.463	1
DDX26B	Amp_12p13.33	0.463	1
DDX26B	Del_5q22.2	0.463	1
GMPS	20p-Amp	0.463	1
NLRC4	Del_8p23.2	0.463	1
NAA25	1q-Amp	0.463	1
PLEKHF2	17p-Del	0.463	1
RLIM	1q-Amp	0.463	1
CYSLTR2	Del_15q22.33	0.463	1
1q-Amp	1p-Del	0.463	1
20p-Amp	Del_16p13.3	0.463	1
RB1	Del_3p14.2	0.464	1
Amp_8p11.23	Del_4q22.1	0.464	1
ARID1A	Del_1p13.1	0.465	1
ATXN3L	Del_5q21.1	0.465	1
RB1	8p-Del	0.465	1
NLRC4	16p-Amp	0.465	1
NLRC4	5q-Del	0.465	1
C2orf29	Del_5q21.1	0.465	1
PIK3R1	18p-Del	0.465	1
CHD3	16p-Amp	0.465	1
CHD3	5q-Del	0.465	1
FKBP9	Del_5q21.1	0.465	1
CYLD	Del_5q12.1	0.465	1
MAP4K3	Del_5q21.1	0.465	1
BCORL1	5q-Del	0.465	1
PLXNA3	Del_5q21.1	0.465	1
TXNDC2	RHOA	0.466	1
TXNDC2	Amp_6p21.1	0.466	1
TXNDC2	Del_3q26.31	0.466	1
TXNDC2	Del_6q26	0.466	1
TXNDC2	Del_8q11.1	0.466	1
NF2	THOC7	0.466	1
NF2	PCBP1	0.466	1
NF2	Del_12p13.2	0.466	1
NF1	5q-Del	0.466	1
TOP2B	Amp_6p21.1	0.466	1
TOP2B	Del_6q26	0.466	1
TOP2B	Del_8q11.1	0.466	1
LINGO4	Del_14q31.1	0.466	1
PLEKHF2	Del_14q31.1	0.466	1
C15orf52	Amp_5p13.2	0.466	1
PCBP1	18p-Del	0.466	1
PCBP1	Del_14q31.1	0.466	1
Amp_5p13.2	Del_3q26.31	0.466	1
Amp_5p13.2	Del_6q26	0.466	1
Amp_5p13.2	Del_8q11.1	0.466	1
WNT1	Del_5q21.1	0.467	1
ALG12	Del_5q21.1	0.467	1
Del_5q21.1	Del_7q31.1	0.467	1
TXNDC2	Del_17p12	0.468	1
FBXW7	7p-Amp	0.468	1
SETD2	Del_5q22.2	0.468	1
EGR1	Del_1p13.1	0.468	1
PTCH1	TMEM126A	0.468	1
8p-Amp	Del_15q22.33	0.468	1
SELPLG	Del_4q22.1	0.469	1
SMAD2	22q-Del	0.469	1
PIK3R1	Del_10q25.2	0.469	1
C14orf184	Del_18q22.1	0.469	1
SLC26A8	Del_4q22.1	0.469	1
22q-Del	Amp_19q13.11	0.469	1
Amp_8p11.21	Del_22q13.32	0.469	1
ACVR1B	THOC7	0.47	1
ACVR1B	UBQLN2	0.47	1
ACVR1B	IQCD	0.47	1
BCOR	Del_8p23.2	0.47	1
NTAN1	Del_10q23.31	0.47	1
TPRKB	Del_10q23.31	0.47	1
C11orf30	Del_21q11.2	0.47	1
UBQLN2	Del_10q23.31	0.47	1
KIAA1586	Del_10q23.31	0.47	1
IQCD	Del_10q23.31	0.47	1
CYLD	Del_21q11.2	0.47	1
PCBP1	Del_10q23.31	0.47	1
MLH1	Del_1p36.11	0.471	1
RPTN	HPS3	0.472	1
PRPS1	13q-Amp	0.472	1
BCOR	Del_10q25.2	0.473	1
KDM6A	12q-Amp	0.473	1
KDM6A	Del_16q23.1	0.473	1
NLRC4	8p-Amp	0.473	1
CHD3	8p-Amp	0.473	1
ATG5	4p-Del	0.473	1
ATG5	Del_3p14.2	0.473	1
PRPS1	21q-Del	0.473	1
PRPS1	4p-Del	0.473	1
PRPS1	Del_3p14.2	0.473	1
21q-Del	Amp_17p11.2	0.473	1
Amp_17p11.2	Del_3p14.2	0.473	1
RHOA	20q-Amp	0.474	1
PLAGL2	Del_15q22.33	0.475	1
RB1	16p-Amp	0.475	1
C14orf184	Del_15q22.33	0.475	1
TP53	Del_6q26	0.476	1
B2M	8p-Amp	0.476	1
FMN2	Del_1p33	0.476	1
SMAD2	8p-Del	0.476	1
SETD2	Amp_16q12.1	0.476	1
ALPK2	4p-Del	0.476	1
ALPK2	Del_3p14.2	0.476	1
DDX26B	8p-Amp	0.476	1
THOC7	8p-Del	0.476	1
LINGO4	8p-Del	0.476	1
IQCD	8p-Del	0.476	1
CYSLTR2	8p-Amp	0.476	1
PCBP1	8p-Del	0.476	1
SMAD4	20p-Amp	0.476	1
1q-Amp	Del_17p12	0.476	1
8p-Del	Del_12p13.2	0.476	1
SOX9	PTGDR	0.477	1
RHOA	14q-Del	0.477	1
ASXL1	Del_8p22	0.477	1
PTEN	12q-Amp	0.477	1
PTEN	5q-Del	0.477	1
PTEN	Del_10q25.2	0.477	1
CYSLTR2	Del_18q21.2	0.477	1
14q-Del	Amp_6p21.1	0.477	1
TXNDC2	Del_1p33	0.478	1
SELPLG	Del_9p21.3	0.478	1
SELPLG	Del_19p13.3	0.478	1
DIP2B	Amp_8p11.23	0.478	1
TOP2B	Amp_11p15.5	0.478	1
TOP2B	Del_1p33	0.478	1
SLC26A8	Del_9p21.3	0.478	1
SLC26A8	Del_19p13.3	0.478	1
Amp_5p13.2	Amp_11p15.5	0.478	1
Amp_19q13.11	Del_9p21.3	0.478	1
B2M	ATXN3L	0.479	1
B2M	Del_3p26.1	0.479	1
B2M	Del_16p13.3	0.479	1
P2RY13	C2orf29	0.479	1
P2RY13	KCTD3	0.479	1
P2RY13	Del_16p13.3	0.479	1
ATXN3L	Amp_16q12.1	0.479	1
NR1H3	GMPS	0.479	1
NR1H3	Del_3p26.1	0.479	1
NR1H3	Del_16p13.3	0.479	1
IDH1	CTNNB1	0.479	1
RPTN	Del_21q11.2	0.479	1
RPTN	Del_22q13.32	0.479	1
CTNNB1	Amp_16p11.2	0.479	1
CTNNB1	Del_17q24.3	0.479	1
RBM44	Del_21q11.2	0.479	1
DDX26B	C2orf29	0.479	1
DDX26B	Del_3p26.1	0.479	1
DDX26B	Del_16p13.3	0.479	1
GMPS	Amp_16q12.1	0.479	1
L1TD1	Amp_16q12.1	0.479	1
DCLK2	Del_21q11.2	0.479	1
DCLK2	Del_22q13.32	0.479	1
C2orf29	CYSLTR2	0.479	1
C2orf29	Amp_16q12.1	0.479	1
FKBP9	CYSLTR2	0.479	1
FKBP9	Amp_16q12.1	0.479	1
CYSLTR2	IDH2	0.479	1
CYSLTR2	PLXNA3	0.479	1
CYSLTR2	Amp_13q22.1	0.479	1
MAP4K3	Amp_16q12.1	0.479	1
KCTD3	Amp_16q12.1	0.479	1
PLXNA3	Amp_16q12.1	0.479	1
SOX9	MAP4K3	0.48	1
SOX9	Del_3p26.1	0.48	1
SELPLG	Amp_8p11.21	0.48	1
CRIPAK	Del_15q21.1	0.48	1
EGR1	Amp_11p15.5	0.48	1
EGR1	Del_1p33	0.48	1
GRB2	Amp_11p15.5	0.48	1
SMAD4	Del_15q22.33	0.48	1
13q-Amp	1p-Del	0.48	1
Amp_16p11.2	Del_15q21.1	0.48	1
CDH1	Amp_8p11.23	0.481	1
MGA	Amp_8q24.21	0.481	1
THOC7	ATM	0.481	1
PCBP1	Del_18p11.31	0.481	1
SLK	16p-Amp	0.481	1
SLK	5q-Del	0.481	1
16p-Amp	Del_16q23.1	0.481	1
MLH1	Del_3p14.2	0.482	1
SOX9	BCOR	0.483	1
SOX9	KDM6A	0.483	1
SOX9	DIP2B	0.483	1
CDH1	Del_15q15.2	0.483	1
ZFP36L2	ECT2	0.483	1
ZFP36L2	Amp_16p11.2	0.483	1
CRIPAK	OR4D10	0.483	1
CRIPAK	MVK	0.483	1
CRIPAK	ATP6V1B1	0.483	1
CRIPAK	NAA25	0.483	1
CRIPAK	17q-Amp	0.483	1
CRIPAK	1p-Del	0.483	1
CRIPAK	Del_6p25.3	0.483	1
MAPK6	ATP6V1B1	0.483	1
MAPK6	17q-Amp	0.483	1
MAPK6	1p-Del	0.483	1
MAPK6	Del_6p25.3	0.483	1
RHOA	CYLD	0.483	1
OR4D10	IDH1	0.483	1
OR4D10	ALDH1A3	0.483	1
OR4D10	Del_17q24.3	0.483	1
MVK	Amp_16p11.2	0.483	1
MVK	Del_17q24.3	0.483	1
MPHOSPH10	17q-Amp	0.483	1
MPHOSPH10	1p-Del	0.483	1
GPATCH8	Amp_16p11.2	0.483	1
GPATCH8	Del_17q24.3	0.483	1
IDH1	1p-Del	0.483	1
IDH1	Del_6p25.3	0.483	1
C11orf30	Amp_6p21.1	0.483	1
C11orf30	Del_3q26.31	0.483	1
C11orf30	Del_6q26	0.483	1
C11orf30	Del_8q11.1	0.483	1
ECT2	17q-Amp	0.483	1
ECT2	1p-Del	0.483	1
ECT2	Del_6p25.3	0.483	1
ALDH1A3	17q-Amp	0.483	1
C14orf43	17q-Amp	0.483	1
C14orf43	1p-Del	0.483	1
ATP6V1B1	Amp_16p11.2	0.483	1
ATP6V1B1	Del_17q24.3	0.483	1
BCL9	Amp_6p21.1	0.483	1
BCL9	Del_3q26.31	0.483	1
BCL9	Del_6q26	0.483	1
BCL9	Del_8q11.1	0.483	1
NAA25	Amp_16p11.2	0.483	1
NAA25	Del_17q24.3	0.483	1
RLIM	Del_17q24.3	0.483	1
CYLD	Del_3q26.31	0.483	1
CYLD	Del_6q26	0.483	1
CYLD	Del_8q11.1	0.483	1
17q-Amp	Del_17q24.3	0.483	1
1q-Amp	14q-Del	0.483	1
18q-Del	Del_3q26.31	0.483	1
1p-Del	Amp_16p11.2	0.483	1
Amp_16p11.2	Del_6p25.3	0.483	1
Amp_20p11.21	Del_3q26.31	0.483	1
ACVR1B	7q-Amp	0.484	1
NTAN1	4q-Del	0.484	1
NF2	22q-Del	0.484	1
NF2	Del_4q22.1	0.484	1
TPRKB	4q-Del	0.484	1
C11orf30	Del_1p13.1	0.484	1
THOC7	4q-Del	0.484	1
UBQLN2	4q-Del	0.484	1
KIAA1586	4q-Del	0.484	1
LINGO4	4q-Del	0.484	1
C14orf184	17p-Del	0.484	1
CYLD	Del_1p13.1	0.484	1
ZBTB20	21q-Del	0.485	1
1q-Amp	21q-Del	0.485	1
1q-Amp	4p-Del	0.485	1
1q-Amp	Del_3p14.2	0.485	1
STARD3NL	FBXW7	0.486	1
ALPK2	Del_16q23.1	0.486	1
SLK	Amp_12p13.33	0.486	1
Amp_12p13.33	Del_16q23.1	0.486	1
Del_5q22.2	Del_16q23.1	0.486	1
SOX9	PTCH1	0.487	1
CDH1	Amp_11p15.5	0.488	1
PIK3R1	RLIM	0.488	1
PIK3R1	17p-Del	0.488	1
PIK3R1	Del_6p25.3	0.488	1
CTNNB1	Amp_17p11.2	0.489	1
CDH1	Del_10q25.2	0.49	1
CDH1	Del_16q23.1	0.49	1
ASXL1	CYSLTR2	0.49	1
ASXL1	Amp_16q12.1	0.49	1
RPTN	1q-Amp	0.49	1
DCLK2	1q-Amp	0.49	1
CDH1	Amp_16p11.2	0.491	1
MLH1	Del_15q11.2	0.491	1
NR1H3	Amp_20p11.23	0.491	1
RB1	1q-Amp	0.491	1
NLRC4	15q-Del	0.491	1
CYSLTR2	Amp_20p11.23	0.491	1
15q-Del	Amp_17q24.1	0.491	1
ASXL1	Del_15q22.33	0.492	1
SETD2	8p-Amp	0.492	1
HPS3	Del_5q12.1	0.492	1
PTGDR	18p-Del	0.492	1
SMAD4	Del_15q21.1	0.492	1
21q-Del	Del_5q12.1	0.492	1
4q-Del	Amp_17q24.1	0.492	1
ASXL1	C14orf184	0.493	1
PLAGL2	15q-Del	0.493	1
C14orf184	15q-Del	0.493	1
SMAD4	5q-Del	0.493	1
ACVR1B	Del_10q25.2	0.494	1
MLH1	ALDH1A3	0.494	1
MLH1	Del_17q24.3	0.494	1
CRIPAK	Del_1p36.11	0.494	1
CRIPAK	Del_15q15.2	0.494	1
KDM6A	EGR1	0.494	1
ECT2	Del_15q15.2	0.494	1
CYSLTR2	Del_18q22.1	0.494	1
Amp_16p11.2	Del_15q15.2	0.494	1
TPRKB	Del_15q11.2	0.495	1
CTNNB1	Del_21q11.2	0.495	1
LINGO4	Del_15q11.2	0.495	1
IQCD	Del_15q11.2	0.495	1
PLEKHF2	Del_15q11.2	0.495	1
ATG5	Del_18q21.2	0.495	1
PCBP1	Del_15q11.2	0.495	1
Amp_20p11.23	Del_1p33	0.495	1
APC	RPTN	0.496	1
TP53	SLK	0.496	1
Amp_12p13.33	Del_8p23.2	0.496	1
APC	CRIPAK	0.497	1
APC	MAPK6	0.497	1
APC	ECT2	0.497	1
APC	C14orf43	0.497	1
TXNDC2	16p-Amp	0.497	1
TXNDC2	5q-Del	0.497	1
WNT1	Amp_8p11.21	0.497	1
GGT1	Del_5q12.1	0.497	1
ATG5	Del_5q12.1	0.497	1
8p-Amp	Del_3p14.2	0.497	1
Amp_17p11.2	Del_5q12.1	0.497	1
BMPR2	Del_1p33	0.498	1
BMPR2	Del_7q31.1	0.498	1
DIP2B	Amp_5p13.2	0.498	1
SMAD4	17q-Amp	0.498	1
SMAD4	Del_6p25.3	0.498	1
NTAN1	Amp_17q24.1	0.499	1
SELPLG	MGA	0.499	1
SELPLG	Del_5q21.1	0.499	1
MGA	Amp_19q13.11	0.499	1
MGA	Del_9p21.3	0.499	1
ATXN3L	Amp_20q12	0.499	1
NR1H3	Amp_8p11.23	0.499	1
TPRKB	Amp_17q24.1	0.499	1
THOC7	NLRC4	0.499	1
THOC7	Amp_17q24.1	0.499	1
UBQLN2	Amp_17q24.1	0.499	1
KIAA1586	Amp_17q24.1	0.499	1
NLRC4	LINGO4	0.499	1
NLRC4	PCBP1	0.499	1
NLRC4	Del_12p13.2	0.499	1
LINGO4	BCORL1	0.499	1
IQCD	CHD3	0.499	1
IQCD	Amp_17q24.1	0.499	1
CHD3	PCBP1	0.499	1
CHD3	Del_12p13.2	0.499	1
PLEKHF2	Amp_17q24.1	0.499	1
HPS3	Amp_8p11.21	0.499	1
CYSLTR2	Amp_8p11.23	0.499	1
BCORL1	PCBP1	0.499	1
BCORL1	Del_12p13.2	0.499	1
IDH2	Amp_20q12	0.499	1
PCBP1	Amp_17q24.1	0.499	1
Del_5q21.1	Del_9p21.3	0.499	1
FAM123B	Amp_6p21.1	0.5	1
FAM123B	Del_8q11.1	0.5	1
HPS3	Amp_6p21.1	0.5	1
HPS3	Del_6q26	0.5	1
HPS3	Del_8q11.1	0.5	1
B2M	SELPLG	0.501	1
B2M	Amp_19q13.11	0.501	1
B2M	Del_9p21.3	0.501	1
B2M	Del_19p13.3	0.501	1
SELPLG	P2RY13	0.501	1
OR4D10	Amp_12p13.33	0.501	1
OR4D10	Del_15q22.33	0.501	1
MGA	Del_4q35.1	0.501	1
P2RY13	Amp_19q13.11	0.501	1
P2RY13	Del_9p21.3	0.501	1
MVK	Amp_12p13.33	0.501	1
SMAD2	CYSLTR2	0.501	1
NR1H3	Amp_19q13.11	0.501	1
NR1H3	Del_9p21.3	0.501	1
NR1H3	Del_19p13.3	0.501	1
GPATCH8	Amp_12p13.33	0.501	1
GPATCH8	Del_5q22.2	0.501	1
ALPK2	1p-Del	0.501	1
ALPK2	Del_6p25.3	0.501	1
DDX26B	Amp_19q13.11	0.501	1
DDX26B	Del_9p21.3	0.501	1
DDX26B	Del_19p13.3	0.501	1
ATP6V1B1	Amp_12p13.33	0.501	1
ATP6V1B1	Del_5q22.2	0.501	1
NAA25	Del_5q22.2	0.501	1
SLC26A8	Amp_16q12.1	0.501	1
RLIM	Amp_12p13.33	0.501	1
RLIM	Del_5q22.2	0.501	1
CYSLTR2	Amp_19q13.11	0.501	1
CYSLTR2	Del_9p21.3	0.501	1
17q-Amp	Del_5q22.2	0.501	1
Amp_12p13.33	Del_6p25.3	0.501	1
Amp_16q12.1	Amp_19q13.11	0.501	1
Del_6p25.3	Del_15q22.33	0.501	1
TP53	B2M	0.502	1
TP53	ALPK2	0.502	1
TXNDC2	Del_8p22	0.502	1
PLAGL2	22q-Del	0.502	1
PLAGL2	Del_4q22.1	0.502	1
C14orf184	Del_4q22.1	0.502	1
HPS3	7q-Amp	0.502	1
Amp_20p11.21	Del_3p26.1	0.502	1
RNF43	Amp_8p11.21	0.503	1
C14orf184	Amp_20q13.12	0.503	1
16p-Amp	Del_1p36.11	0.503	1
ZFP36L2	Del_3p26.1	0.504	1
ZFP36L2	Del_16p13.3	0.504	1
OR4D10	C2orf29	0.504	1
OR4D10	PLXNA3	0.504	1
OR4D10	Del_3p26.1	0.504	1
OR4D10	Del_10q21.1	0.504	1
MVK	ATXN3L	0.504	1
MVK	Del_3p26.1	0.504	1
MVK	Del_10q21.1	0.504	1
MVK	Del_16p13.3	0.504	1
ATXN3L	17q-Amp	0.504	1
RBMX	17q-Amp	0.504	1
RBMX	1p-Del	0.504	1
GPATCH8	C2orf29	0.504	1
GPATCH8	IDH2	0.504	1
GPATCH8	Del_3p26.1	0.504	1
GPATCH8	Del_10q21.1	0.504	1
GPATCH8	Del_16p13.3	0.504	1
C11orf30	Amp_11p15.5	0.504	1
RBM44	Del_4q35.1	0.504	1
GMPS	17q-Amp	0.504	1
GMPS	1p-Del	0.504	1
GMPS	Del_6p25.3	0.504	1
L1TD1	RLIM	0.504	1
L1TD1	17q-Amp	0.504	1
DCLK2	Del_4q35.1	0.504	1
C2orf29	17q-Amp	0.504	1
C2orf29	1p-Del	0.504	1
ATP6V1B1	MAP4K3	0.504	1
ATP6V1B1	IDH2	0.504	1
ATP6V1B1	Del_3p26.1	0.504	1
ATP6V1B1	Del_10q21.1	0.504	1
NAA25	Del_3p26.1	0.504	1
NAA25	Del_10q21.1	0.504	1
NAA25	Del_16p13.3	0.504	1
FKBP9	RLIM	0.504	1
FKBP9	17q-Amp	0.504	1
FKBP9	1p-Del	0.504	1
RLIM	IDH2	0.504	1
RLIM	Del_3p26.1	0.504	1
RLIM	Del_10q21.1	0.504	1
CYLD	Del_1p33	0.504	1
MAP4K3	17q-Amp	0.504	1
MAP4K3	1p-Del	0.504	1
KCTD3	17q-Amp	0.504	1
KCTD3	1p-Del	0.504	1
KCTD3	Del_6p25.3	0.504	1
IDH2	1p-Del	0.504	1
IDH2	Del_6p25.3	0.504	1
PLXNA3	17q-Amp	0.504	1
PLXNA3	1p-Del	0.504	1
17q-Amp	Del_3p26.1	0.504	1
17q-Amp	Del_10q21.1	0.504	1
17q-Amp	Del_16p13.3	0.504	1
8p-Amp	Del_10q25.2	0.504	1
8p-Amp	Del_16q23.1	0.504	1
4p-Del	Amp_8p11.23	0.504	1
Amp_5p13.2	Del_15q11.2	0.504	1
ARID1A	Amp_17p11.2	0.505	1
B2M	Del_4q22.1	0.505	1
FMN2	Del_5q22.2	0.505	1
P2RY13	22q-Del	0.505	1
P2RY13	Del_4q22.1	0.505	1
NR1H3	22q-Del	0.505	1
DDX26B	22q-Del	0.505	1
CYSLTR2	22q-Del	0.505	1
PRPS1	Amp_20q12	0.505	1
PTGDR	Del_18p11.31	0.505	1
22q-Del	Amp_16q12.1	0.505	1
ARID1A	Amp_8p11.21	0.506	1
CHD3	Del_15q21.1	0.506	1
BCORL1	Del_15q21.1	0.506	1
ACVR1B	GRB2	0.507	1
ZFP36L2	Del_8p23.2	0.507	1
EGR1	Del_10q23.31	0.507	1
GRB2	Del_10q23.31	0.507	1
Del_6p25.3	Del_8p23.2	0.507	1
ZBTB20	Amp_8q24.21	0.508	1
CTNNB1	Del_3p14.2	0.508	1
ATG5	Del_18q22.1	0.508	1
1q-Amp	Del_8p22	0.508	1
CRIPAK	RPTN	0.509	1
CRIPAK	RBM44	0.509	1
MAPK6	DCLK2	0.509	1
STARD3NL	IDH1	0.509	1
STARD3NL	ALDH1A3	0.509	1
STARD3NL	Amp_16p11.2	0.509	1
IDH1	RPTN	0.509	1
IDH1	RBM44	0.509	1
RPTN	ALDH1A3	0.509	1
RPTN	Del_17q24.3	0.509	1
RBM44	Amp_16p11.2	0.509	1
RBM44	Del_17q24.3	0.509	1
ECT2	DCLK2	0.509	1
NLRC4	22q-Del	0.509	1
DCLK2	Del_17q24.3	0.509	1
ATG5	Del_1p13.1	0.509	1
BCORL1	22q-Del	0.509	1
SMAD4	Amp_8q24.21	0.509	1
22q-Del	Amp_17q24.1	0.509	1
Amp_17p11.2	Del_1p13.1	0.509	1
Amp_17q24.1	Del_4q22.1	0.509	1
B2M	Del_14q31.1	0.51	1
KDM6A	8p-Del	0.51	1
DIP2B	8p-Del	0.51	1
CYSLTR2	Del_14q31.1	0.51	1
SMAD4	Del_10q25.2	0.51	1
SMAD4	Del_16q23.1	0.51	1
FMN2	Del_3q26.31	0.511	1
FMN2	Del_8q11.1	0.511	1
ROS1	Amp_6p21.1	0.511	1
PIK3R1	Del_5q12.1	0.511	1
HPS3	Del_1p13.1	0.511	1
BMPR2	Del_16p13.3	0.512	1
MPHOSPH10	8q-Amp	0.512	1
IDH1	8q-Amp	0.512	1
ECT2	8q-Amp	0.512	1
ACVR1B	SMAD4	0.513	1
C11orf30	16p-Amp	0.513	1
C11orf30	5q-Del	0.513	1
BCL9	16p-Amp	0.513	1
BCL9	5q-Del	0.513	1
CYLD	16p-Amp	0.513	1
CYLD	5q-Del	0.513	1
IDH2	Del_8p23.2	0.513	1
TP53	WNT1	0.514	1
TP53	ALG12	0.514	1
TP53	Del_7q31.1	0.514	1
SOX9	SELPLG	0.514	1
SOX9	Amp_19q13.11	0.514	1
SOX9	Del_9p21.3	0.514	1
SOX9	Del_19p13.3	0.514	1
NTAN1	Del_10q25.2	0.514	1
TPRKB	Del_10q25.2	0.514	1
TPRKB	Del_16q23.1	0.514	1
THOC7	SLK	0.514	1
THOC7	12q-Amp	0.514	1
UBQLN2	SLK	0.514	1
UBQLN2	12q-Amp	0.514	1
UBQLN2	Del_10q25.2	0.514	1
RB1	Del_4q22.1	0.514	1
KIAA1586	Del_16q23.1	0.514	1
DCLK2	17p-Del	0.514	1
IQCD	SLK	0.514	1
IQCD	Del_10q25.2	0.514	1
PLEKHF2	12q-Amp	0.514	1
PLEKHF2	Del_10q25.2	0.514	1
PCBP1	Del_10q25.2	0.514	1
PCBP1	Del_16q23.1	0.514	1
12q-Amp	Del_12p13.2	0.514	1
Del_12p13.2	Del_16q23.1	0.514	1
CRIPAK	Del_3p14.2	0.515	1
MAPK6	21q-Del	0.515	1
MAPK6	Del_3p14.2	0.515	1
OR4D10	8q-Amp	0.515	1
SMAD2	Amp_8q24.21	0.515	1
IDH1	21q-Del	0.515	1
SETD2	17q-Amp	0.515	1
PTEN	RBM44	0.515	1
ECT2	21q-Del	0.515	1
ECT2	4p-Del	0.515	1
ALDH1A3	21q-Del	0.515	1
ALDH1A3	Del_3p14.2	0.515	1
C14orf43	21q-Del	0.515	1
C14orf43	4p-Del	0.515	1
ATP6V1B1	8q-Amp	0.515	1
RLIM	8q-Amp	0.515	1
CYLD	8p-Del	0.515	1
8p-Amp	15q-Del	0.515	1
21q-Del	Amp_16p11.2	0.515	1
Amp_16p11.2	Del_3p14.2	0.515	1
TXNDC2	18q-Del	0.516	1
TXNDC2	Amp_20p11.21	0.516	1
12q-Amp	4q-Del	0.516	1
ALPK2	Del_4q22.1	0.517	1
Amp_8q24.21	Del_4q35.1	0.517	1
MGA	4q-Del	0.518	1
ASXL1	Amp_17q12	0.518	1
ZBTB20	Amp_6p21.1	0.518	1
ZBTB20	Del_3q26.31	0.518	1
ZBTB20	Del_6q26	0.518	1
ZBTB20	Del_8q11.1	0.518	1
ALPK2	Amp_5p13.2	0.518	1
C15orf52	1q-Amp	0.518	1
1q-Amp	Del_6q26	0.518	1
Amp_5p13.2	Del_15q22.33	0.518	1
TXNDC2	ACVR1B	0.519	1
ACVR1B	Amp_5p13.2	0.519	1
FBXW7	EGR1	0.519	1
WNT1	4p-Del	0.52	1
WNT1	Amp_17q12	0.52	1
WNT1	Del_3p14.2	0.52	1
ALG12	21q-Del	0.52	1
ALG12	4p-Del	0.52	1
ALG12	Amp_17q12	0.52	1
TPRKB	8q-Amp	0.52	1
CTNNB1	Amp_5p13.2	0.52	1
CTNNB1	Amp_8q24.21	0.52	1
UBQLN2	8q-Amp	0.52	1
LINGO4	8q-Amp	0.52	1
IQCD	8q-Amp	0.52	1
PTGDR	21q-Del	0.52	1
PTGDR	4p-Del	0.52	1
PTGDR	Amp_17q12	0.52	1
PTGDR	Del_3p14.2	0.52	1
TMEM126A	Amp_17q12	0.52	1
ASXL1	Del_10q25.2	0.521	1
ZBTB20	Del_5q12.1	0.521	1
PLAGL2	Del_5q21.1	0.521	1
EGR1	4q-Del	0.521	1
C2orf29	Del_15q21.1	0.521	1
FKBP9	Del_15q21.1	0.521	1
GRB2	4q-Del	0.521	1
NF2	4p-Del	0.522	1
ECT2	14q-Del	0.522	1
GGT1	Amp_11p15.5	0.522	1
CYSLTR2	8p-Del	0.522	1
ATG5	Amp_11p15.5	0.522	1
ATG5	Del_1p33	0.522	1
PRPS1	Amp_11p15.5	0.522	1
PRPS1	Del_1p33	0.522	1
Amp_17p11.2	Del_1p33	0.522	1
B2M	Amp_16q12.1	0.523	1
STARD3NL	Amp_8q24.21	0.523	1
P2RY13	NR1H3	0.523	1
NR1H3	Amp_16q12.1	0.523	1
DDX26B	Amp_16q12.1	0.523	1
DCLK2	Amp_8q24.21	0.523	1
CYSLTR2	Amp_16q12.1	0.523	1
GRB2	Amp_20p11.21	0.523	1
Amp_6p21.1	Del_21q11.2	0.523	1
TP53	ALDH1A3	0.524	1
CDH1	4p-Del	0.524	1
ZFP36L2	SMAD2	0.525	1
ZFP36L2	Amp_19q13.11	0.525	1
ZFP36L2	Del_9p21.3	0.525	1
SELPLG	MVK	0.525	1
SELPLG	ATP6V1B1	0.525	1
SELPLG	1p-Del	0.525	1
OR4D10	Del_9p21.3	0.525	1
MVK	SMAD2	0.525	1
MVK	Del_9p21.3	0.525	1
MVK	Del_19p13.3	0.525	1
SMAD2	ATP6V1B1	0.525	1
SMAD2	RLIM	0.525	1
SMAD2	17q-Amp	0.525	1
SMAD2	1p-Del	0.525	1
GPATCH8	Del_9p21.3	0.525	1
GPATCH8	Del_19p13.3	0.525	1
ATP6V1B1	Amp_19q13.11	0.525	1
ATP6V1B1	Del_9p21.3	0.525	1
ATP6V1B1	Del_19p13.3	0.525	1
NAA25	Amp_19q13.11	0.525	1
NAA25	Del_9p21.3	0.525	1
NAA25	Del_19p13.3	0.525	1
SLC26A8	RLIM	0.525	1
SLC26A8	1p-Del	0.525	1
RLIM	Del_9p21.3	0.525	1
RLIM	Del_19p13.3	0.525	1
1p-Del	Amp_19q13.11	0.525	1
1p-Del	Del_19p13.3	0.525	1
Amp_19q13.11	Del_6p25.3	0.525	1
NF2	GRB2	0.526	1
C14orf184	Del_18q12.2	0.526	1
22q-Del	Amp_8q24.21	0.526	1
Amp_8p11.21	Del_15q21.1	0.526	1
Amp_8q24.21	Del_4q22.1	0.526	1
IDH2	20q-Amp	0.528	1
ZFP36L2	ASXL1	0.529	1
STARD3NL	IDH2	0.529	1
STARD3NL	Del_16p13.3	0.529	1
OR4D10	15q-Del	0.529	1
ATXN3L	CTNNB1	0.529	1
ASXL1	1p-Del	0.529	1
ASXL1	Del_6p25.3	0.529	1
RPTN	IDH2	0.529	1
RPTN	Del_16p13.3	0.529	1
CTNNB1	Del_16p13.3	0.529	1
RBM44	Del_3p26.1	0.529	1
RBM44	Del_10q21.1	0.529	1
RBM44	Del_16p13.3	0.529	1
DCLK2	C2orf29	0.529	1
DCLK2	KCTD3	0.529	1
DCLK2	IDH2	0.529	1
DCLK2	Del_3p26.1	0.529	1
DCLK2	Del_10q21.1	0.529	1
DCLK2	Del_16p13.3	0.529	1
HPS3	Amp_8p11.23	0.529	1
15q-Del	Del_6p25.3	0.529	1
TXNDC2	PCBP1	0.53	1
NTAN1	Amp_5p13.2	0.53	1
TPRKB	Amp_5p13.2	0.53	1
THOC7	TOP2B	0.53	1
THOC7	Amp_5p13.2	0.53	1
UBQLN2	Amp_5p13.2	0.53	1
TOP2B	PCBP1	0.53	1
TOP2B	Del_12p13.2	0.53	1
KIAA1586	Amp_5p13.2	0.53	1
HPS3	16p-Amp	0.53	1
HPS3	5q-Del	0.53	1
PTGDR	Del_17p12	0.53	1
PCBP1	Amp_5p13.2	0.53	1
SOX9	C14orf184	0.531	1
Amp_12p13.33	Del_5q12.1	0.531	1
Del_5q12.1	Del_15q22.33	0.531	1
PIK3R1	Del_15q21.1	0.532	1
18p-Del	Del_3q26.31	0.532	1
TXNDC2	7p-Amp	0.534	1
BCOR	GGT1	0.534	1
BCOR	ATG5	0.534	1
MLH1	L1TD1	0.534	1
MLH1	MAP4K3	0.534	1
MLH1	Del_16p13.3	0.534	1
NTAN1	Amp_8q24.21	0.534	1
SELPLG	20p-Amp	0.534	1
KDM6A	GGT1	0.534	1
KDM6A	Amp_17p11.2	0.534	1
ATXN3L	Del_1p36.11	0.534	1
DIP2B	GGT1	0.534	1
DIP2B	ATG5	0.534	1
DIP2B	PRPS1	0.534	1
DIP2B	Amp_17p11.2	0.534	1
TPRKB	Del_8p22	0.534	1
THOC7	Amp_8q24.21	0.534	1
C2orf29	Del_15q15.2	0.534	1
LINGO4	Amp_8q24.21	0.534	1
PIK3R1	BCL9	0.534	1
PLEKHF2	Amp_8q24.21	0.534	1
FKBP9	Del_15q15.2	0.534	1
PRPS1	Amp_20p11.23	0.534	1
IDH2	Del_1p36.11	0.534	1
Amp_17p11.2	Amp_20p11.23	0.534	1
RNF43	Amp_6p21.1	0.535	1
RNF43	Del_3q26.31	0.535	1
RNF43	Del_8q11.1	0.535	1
MLH1	MGA	0.535	1
OR4D10	7p-Amp	0.535	1
EGR1	Amp_17q24.1	0.535	1
TOP2B	8p-Amp	0.535	1
RLIM	7p-Amp	0.535	1
GRB2	Amp_17q24.1	0.535	1
7p-Amp	1p-Del	0.535	1
TXNDC2	Amp_20q12	0.536	1
ZFP36L2	Amp_20p11.21	0.536	1
OR4D10	Amp_20p11.21	0.536	1
HPS3	Del_4q35.1	0.536	1
18q-Del	Del_6p25.3	0.536	1
ARID1A	Amp_12p13.33	0.537	1
ARID1A	Del_5q22.2	0.537	1
CRIPAK	Amp_6p21.1	0.537	1
CRIPAK	Del_6q26	0.537	1
CRIPAK	Del_8q11.1	0.537	1
MAPK6	Del_3q26.31	0.537	1
MAPK6	Del_6q26	0.537	1
MAPK6	Del_8q11.1	0.537	1
RHOA	ECT2	0.537	1
RHOA	Amp_16p11.2	0.537	1
RHOA	Del_17q24.3	0.537	1
P2RY13	Amp_8p11.21	0.537	1
MPHOSPH10	Amp_6p21.1	0.537	1
MPHOSPH10	Del_3q26.31	0.537	1
MPHOSPH10	Del_6q26	0.537	1
MPHOSPH10	Del_8q11.1	0.537	1
TPRKB	7p-Amp	0.537	1
IDH1	Amp_6p21.1	0.537	1
IDH1	Del_3q26.31	0.537	1
IDH1	Del_6q26	0.537	1
IDH1	Del_8q11.1	0.537	1
ECT2	Amp_6p21.1	0.537	1
ECT2	Del_6q26	0.537	1
ECT2	Del_8q11.1	0.537	1
THOC7	7p-Amp	0.537	1
ALDH1A3	Del_3q26.31	0.537	1
C14orf43	Amp_6p21.1	0.537	1
C14orf43	Del_3q26.31	0.537	1
C14orf43	Del_6q26	0.537	1
C14orf43	Del_8q11.1	0.537	1
IQCD	7p-Amp	0.537	1
C15orf52	Amp_16p11.2	0.537	1
C15orf52	Del_17q24.3	0.537	1
SMAD4	Del_15q11.2	0.537	1
18q-Del	Del_3p14.2	0.537	1
Amp_6p21.1	Amp_16p11.2	0.537	1
Amp_16p11.2	Del_8q11.1	0.537	1
NLRC4	12q-Amp	0.538	1
NLRC4	Del_10q25.2	0.538	1
NLRC4	Del_16q23.1	0.538	1
Amp_17q24.1	Del_10q25.2	0.538	1
ASXL1	15q-Del	0.539	1
22q-Del	Amp_17q12	0.539	1
8p-Del	Amp_17q12	0.539	1
8p-Del	Del_3p14.2	0.539	1
CDH1	Del_16p13.3	0.541	1
TP53	IQCD	0.542	1
TP53	PCBP1	0.542	1
TP53	Del_12p13.2	0.542	1
FAM123B	Del_21q11.2	0.542	1
RHOA	CTNNB1	0.542	1
MGA	8q-Amp	0.542	1
RPTN	Amp_12p13.33	0.542	1
RPTN	Del_15q22.33	0.542	1
CTNNB1	Del_3q26.31	0.542	1
RBM44	Amp_12p13.33	0.542	1
DCLK2	Del_15q22.33	0.542	1
Amp_8p11.21	Del_3p14.2	0.542	1
WNT1	Del_5q12.1	0.543	1
OR4D10	22q-Del	0.543	1
ALG12	Del_5q12.1	0.543	1
PLAGL2	7p-Amp	0.543	1
C14orf184	Amp_20q12	0.543	1
RLIM	22q-Del	0.543	1
RLIM	Del_4q22.1	0.543	1
PTGDR	Del_5q12.1	0.543	1
22q-Del	Del_6p25.3	0.543	1
Amp_20q11.21	Del_10q23.31	0.543	1
Del_4q22.1	Del_6p25.3	0.543	1
PIK3R1	Del_5q21.1	0.544	1
BCL9	Del_10q23.31	0.544	1
CYLD	Del_10q23.31	0.544	1
BMPR2	SELPLG	0.545	1
BMPR2	SMAD2	0.545	1
BMPR2	Amp_19q13.11	0.545	1
IDH1	RB1	0.545	1
RLIM	Amp_13q12.13	0.545	1
DIP2B	17p-Del	0.546	1
RBMX	4p-Del	0.546	1
C11orf30	THOC7	0.546	1
C11orf30	PCBP1	0.546	1
THOC7	BCL9	0.546	1
UBQLN2	CYLD	0.546	1
RB1	LINGO4	0.546	1
RB1	Del_12p13.2	0.546	1
GMPS	Amp_17q12	0.546	1
GMPS	Del_3p14.2	0.546	1
L1TD1	21q-Del	0.546	1
L1TD1	Amp_17q12	0.546	1
BCL9	IQCD	0.546	1
BCL9	Del_12p13.2	0.546	1
IQCD	Del_15q21.1	0.546	1
PLEKHF2	Del_15q21.1	0.546	1
FKBP9	4p-Del	0.546	1
CYLD	PCBP1	0.546	1
MAP4K3	4p-Del	0.546	1
MAP4K3	Del_3p14.2	0.546	1
KCTD3	Del_3p14.2	0.546	1
BCORL1	Del_5q21.1	0.546	1
IDH2	4p-Del	0.546	1
IDH2	Amp_17q12	0.546	1
IDH2	Del_3p14.2	0.546	1
PLXNA3	21q-Del	0.546	1
PCBP1	Del_15q21.1	0.546	1
1q-Amp	18q-Del	0.546	1
Amp_17q12	Del_10q21.1	0.546	1
Del_12p13.2	Del_15q21.1	0.546	1
FAM123B	Del_15q21.1	0.547	1
B2M	RLIM	0.547	1
B2M	17q-Amp	0.547	1
B2M	1p-Del	0.547	1
B2M	Del_6p25.3	0.547	1
ZFP36L2	CYSLTR2	0.547	1
ZFP36L2	Amp_16q12.1	0.547	1
OR4D10	Amp_16q12.1	0.547	1
PRKDC	Amp_12p13.33	0.547	1
P2RY13	RLIM	0.547	1
P2RY13	1p-Del	0.547	1
MVK	Amp_16q12.1	0.547	1
NR1H3	GPATCH8	0.547	1
NR1H3	RLIM	0.547	1
NR1H3	17q-Amp	0.547	1
NR1H3	1p-Del	0.547	1
GPATCH8	Amp_16q12.1	0.547	1
DDX26B	17q-Amp	0.547	1
DDX26B	1p-Del	0.547	1
ATP6V1B1	Amp_16q12.1	0.547	1
NAA25	CYSLTR2	0.547	1
NAA25	Amp_16q12.1	0.547	1
RLIM	Amp_16q12.1	0.547	1
CYSLTR2	1p-Del	0.547	1
1p-Del	Amp_16q12.1	0.547	1
Amp_16q12.1	Del_6p25.3	0.547	1
ACVR1B	GGT1	0.548	1
ACVR1B	ATG5	0.548	1
ACVR1B	PRPS1	0.548	1
ACVR1B	Amp_17p11.2	0.548	1
OR4D10	Amp_8p11.23	0.548	1
ZBTB20	16p-Amp	0.548	1
ZBTB20	5q-Del	0.548	1
RB1	Del_10q23.31	0.548	1
RLIM	Amp_8p11.23	0.548	1
PRPS1	Del_10q23.31	0.548	1
1q-Amp	5q-Del	0.548	1
SOX9	B2M	0.549	1
SOX9	NR1H3	0.549	1
SOX9	Amp_16q12.1	0.549	1
PLEKHF2	20p-Amp	0.549	1
PTGDR	Del_8p22	0.549	1
PCBP1	20p-Amp	0.549	1
SMAD4	Amp_13q12.13	0.549	1
Amp_6p21.1	Del_18p11.31	0.549	1
Del_6q26	Del_18p11.31	0.549	1
ACVR1B	BMPR2	0.55	1
BMPR2	Del_10q23.31	0.55	1
SELPLG	RBM44	0.55	1
CRIPAK	Del_5q12.1	0.55	1
KDM6A	HPS3	0.55	1
KDM6A	Amp_8q24.21	0.55	1
KDM6A	Del_8p22	0.55	1
MAPK6	Del_5q12.1	0.55	1
STARD3NL	Amp_19q13.11	0.55	1
STARD3NL	Del_9p21.3	0.55	1
EGR1	Del_10q25.2	0.55	1
RPTN	Amp_19q13.11	0.55	1
RPTN	Del_9p21.3	0.55	1
RPTN	Del_19p13.3	0.55	1
RBM44	Del_9p21.3	0.55	1
RBM44	Del_19p13.3	0.55	1
ECT2	Del_5q12.1	0.55	1
DCLK2	Del_9p21.3	0.55	1
DCLK2	Del_19p13.3	0.55	1
GRB2	SLK	0.55	1
GRB2	12q-Amp	0.55	1
GRB2	Del_10q25.2	0.55	1
Del_3q26.31	Del_18q21.2	0.55	1
APC	ATP6V1B1	0.551	1
RNF43	Amp_12p13.33	0.551	1
CDH1	Amp_6p21.1	0.551	1
CDH1	Del_3q26.31	0.551	1
CDH1	Del_6q26	0.551	1
PIK3R1	Amp_20p11.23	0.551	1
BCL9	Amp_12p13.33	0.551	1
CYLD	Del_5q22.2	0.551	1
CYLD	Del_15q22.33	0.551	1
ASXL1	Amp_5p13.2	0.552	1
15q-Del	Amp_5p13.2	0.552	1
TP53	CDH1	0.554	1
FAM123B	4q-Del	0.554	1
EGR1	Del_15q11.2	0.554	1
PIK3R1	Del_15q15.2	0.554	1
18q-Del	Amp_12p13.33	0.554	1
WNT1	Del_1p13.1	0.555	1
ALG12	Del_1p13.1	0.555	1
RPTN	8p-Amp	0.555	1
RBM44	8p-Amp	0.555	1
Del_1p13.1	Del_7q31.1	0.555	1
SOX9	CDH1	0.556	1
MLH1	TPRKB	0.556	1
MLH1	KIAA1586	0.556	1
MLH1	PCBP1	0.556	1
MLH1	Del_12p13.2	0.556	1
RHOA	RBMX	0.556	1
RHOA	GMPS	0.556	1
RHOA	L1TD1	0.556	1
RHOA	C2orf29	0.556	1
RHOA	MAP4K3	0.556	1
RHOA	KCTD3	0.556	1
RHOA	PLXNA3	0.556	1
RHOA	Del_16p13.3	0.556	1
ATXN3L	C15orf52	0.556	1
ATXN3L	Amp_6p21.1	0.556	1
RBMX	C15orf52	0.556	1
RBMX	Del_3q26.31	0.556	1
RBMX	Del_6q26	0.556	1
RBMX	Del_8q11.1	0.556	1
GMPS	C15orf52	0.556	1
GMPS	Del_3q26.31	0.556	1
GMPS	Del_6q26	0.556	1
GMPS	Del_8q11.1	0.556	1
L1TD1	Amp_6p21.1	0.556	1
L1TD1	Del_3q26.31	0.556	1
L1TD1	Del_8q11.1	0.556	1
C2orf29	C15orf52	0.556	1
IQCD	Del_15q15.2	0.556	1
PLEKHF2	Del_15q15.2	0.556	1
FKBP9	Amp_6p21.1	0.556	1
FKBP9	Del_6q26	0.556	1
FKBP9	Del_8q11.1	0.556	1
HPS3	8p-Del	0.556	1
MAP4K3	Amp_6p21.1	0.556	1
MAP4K3	Del_3q26.31	0.556	1
MAP4K3	Del_6q26	0.556	1
MAP4K3	Del_8q11.1	0.556	1
KCTD3	Amp_6p21.1	0.556	1
KCTD3	Del_3q26.31	0.556	1
KCTD3	Del_6q26	0.556	1
KCTD3	Del_8q11.1	0.556	1
IDH2	Amp_6p21.1	0.556	1
IDH2	Del_3q26.31	0.556	1
IDH2	Del_6q26	0.556	1
IDH2	Del_8q11.1	0.556	1
PLXNA3	Amp_6p21.1	0.556	1
PLXNA3	Del_6q26	0.556	1
C15orf52	Del_3p26.1	0.556	1
C15orf52	Del_10q21.1	0.556	1
C15orf52	Del_16p13.3	0.556	1
PCBP1	Del_1p36.11	0.556	1
PCBP1	Del_15q15.2	0.556	1
Amp_6p21.1	Del_10q21.1	0.556	1
Del_6q26	Del_10q21.1	0.556	1
Del_12p13.2	Del_15q15.2	0.556	1
RNF43	1q-Amp	0.557	1
IDH1	PTCH1	0.557	1
PTCH1	Amp_16p11.2	0.557	1
BCORL1	Amp_8q24.21	0.557	1
FAM123B	Del_3p14.2	0.558	1
MLH1	Amp_8p11.21	0.558	1
MLH1	Del_16q23.1	0.558	1
STARD3NL	13q-Amp	0.558	1
ZBTB20	Del_1p33	0.558	1
PIK3R1	8p-Del	0.558	1
SLK	Del_1p36.11	0.558	1
Amp_8p11.21	Del_15q15.2	0.558	1
SOX9	PRKDC	0.559	1
NF2	NAA25	0.559	1
NF2	17q-Amp	0.559	1
NF2	Del_6p25.3	0.559	1
FBXW7	ASXL1	0.559	1
ATM	Amp_8q24.21	0.559	1
RLIM	Del_14q31.1	0.559	1
C14orf184	20q-Amp	0.56	1
ATG5	4q-Del	0.561	1
PRPS1	4q-Del	0.561	1
SLK	12q-Amp	0.561	1
SLK	Del_16q23.1	0.561	1
4q-Del	Amp_17p11.2	0.561	1
Amp_20p11.21	Del_22q13.32	0.561	1
FAM123B	Del_4q22.1	0.562	1
TXNDC2	CHD3	0.562	1
ALG12	20p-Amp	0.562	1
TPRKB	HPS3	0.562	1
NLRC4	7q-Amp	0.562	1
RLIM	Amp_13q22.1	0.562	1
CYSLTR2	Del_17p12	0.562	1
PTGDR	20p-Amp	0.562	1
BCORL1	Amp_5p13.2	0.562	1
IDH2	14q-Del	0.562	1
TMEM126A	20p-Amp	0.562	1
APC	FBXW7	0.563	1
TP53	DCLK2	0.563	1
OR4D10	Amp_20p11.23	0.563	1
Amp_20p11.23	Del_6p25.3	0.563	1
Amp_20p11.21	Del_1p13.1	0.563	1
FMN2	ALDH1A3	0.564	1
FMN2	Amp_16p11.2	0.564	1
ALG12	CTNNB1	0.564	1
THOC7	13q-Amp	0.564	1
SLC26A8	Del_15q21.1	0.564	1
PCBP1	13q-Amp	0.564	1
SOX9	Amp_17q24.1	0.565	1
BCOR	4p-Del	0.565	1
C14orf184	Amp_20q11.21	0.565	1
WNT1	Amp_11p15.5	0.566	1
WNT1	Del_1p33	0.566	1
CRIPAK	16p-Amp	0.566	1
CRIPAK	5q-Del	0.566	1
MAPK6	16p-Amp	0.566	1
MAPK6	5q-Del	0.566	1
ALG12	Amp_11p15.5	0.566	1
ALG12	Del_1p33	0.566	1
MPHOSPH10	16p-Amp	0.566	1
MPHOSPH10	5q-Del	0.566	1
IDH1	16p-Amp	0.566	1
IDH1	5q-Del	0.566	1
ECT2	5q-Del	0.566	1
ALDH1A3	16p-Amp	0.566	1
ALDH1A3	5q-Del	0.566	1
C14orf43	16p-Amp	0.566	1
C14orf43	5q-Del	0.566	1
PTGDR	Amp_11p15.5	0.566	1
TMEM126A	Del_1p33	0.566	1
Amp_6p21.1	Del_18q22.1	0.566	1
Amp_11p15.5	Del_7q31.1	0.566	1
Del_1p33	Del_7q31.1	0.566	1
Del_3p14.2	Del_18q12.2	0.566	1
BCL9	8p-Amp	0.567	1
TXNDC2	20q-Amp	0.568	1
CRIPAK	Del_1p13.1	0.568	1
IDH1	Del_1p13.1	0.568	1
RPTN	15q-Del	0.568	1
ALDH1A3	Del_1p13.1	0.568	1
DCLK2	15q-Del	0.568	1
MAP4K3	8q-Amp	0.568	1
Del_1p13.1	Del_17q24.3	0.568	1
ARID1A	8p-Amp	0.57	1
TXNDC2	22q-Del	0.57	1
ZFP36L2	OR4D10	0.57	1
ZFP36L2	ATP6V1B1	0.57	1
ZFP36L2	NAA25	0.57	1
ZFP36L2	RLIM	0.57	1
ZFP36L2	17q-Amp	0.57	1
ZFP36L2	1p-Del	0.57	1
OR4D10	ATP6V1B1	0.57	1
OR4D10	17q-Amp	0.57	1
OR4D10	1p-Del	0.57	1
OR4D10	Del_6p25.3	0.57	1
MVK	RLIM	0.57	1
MVK	17q-Amp	0.57	1
MVK	1p-Del	0.57	1
MVK	Del_6p25.3	0.57	1
GPATCH8	NAA25	0.57	1
GPATCH8	17q-Amp	0.57	1
GPATCH8	1p-Del	0.57	1
GPATCH8	Del_6p25.3	0.57	1
TOP2B	Del_4q22.1	0.57	1
ATP6V1B1	RLIM	0.57	1
ATP6V1B1	17q-Amp	0.57	1
ATP6V1B1	1p-Del	0.57	1
ATP6V1B1	Del_6p25.3	0.57	1
NAA25	RLIM	0.57	1
NAA25	17q-Amp	0.57	1
NAA25	1p-Del	0.57	1
NAA25	Del_6p25.3	0.57	1
RLIM	17q-Amp	0.57	1
RLIM	Del_6p25.3	0.57	1
SMAD4	Del_1p33	0.57	1
17q-Amp	1p-Del	0.57	1
17q-Amp	Del_6p25.3	0.57	1
FAM123B	MLH1	0.571	1
FMN2	4q-Del	0.571	1
STARD3NL	Amp_16q12.1	0.571	1
MGA	RLIM	0.571	1
MGA	17q-Amp	0.571	1
NR1H3	RBM44	0.571	1
NR1H3	DCLK2	0.571	1
RPTN	Amp_16q12.1	0.571	1
CTNNB1	Del_15q11.2	0.571	1
RBM44	Amp_16q12.1	0.571	1
DDX26B	DCLK2	0.571	1
DCLK2	CYSLTR2	0.571	1
NAA25	Del_5q21.1	0.571	1
RLIM	Del_5q21.1	0.571	1
SMAD4	1q-Amp	0.571	1
15q-Del	Del_5q12.1	0.571	1
8p-Del	Del_6p25.3	0.571	1
MLH1	7p-Amp	0.572	1
PLAGL2	4p-Del	0.572	1
PLAGL2	Amp_17q12	0.572	1
PLAGL2	Del_3p14.2	0.572	1
PIK3R1	C15orf52	0.572	1
PIK3R1	Del_6q26	0.572	1
C14orf184	21q-Del	0.572	1
C14orf184	4p-Del	0.572	1
CDH1	7p-Amp	0.573	1
SLC26A8	SMAD4	0.573	1
RNF43	Del_10q23.31	0.574	1
GMPS	Amp_20p11.23	0.574	1
NLRC4	GGT1	0.574	1
C2orf29	Amp_20p11.23	0.574	1
CHD3	GGT1	0.574	1
CHD3	Amp_17p11.2	0.574	1
PRPS1	Amp_17q24.1	0.574	1
BCORL1	Amp_17p11.2	0.574	1
Amp_12p13.33	Del_4q35.1	0.574	1
Amp_20p11.23	Del_3p26.1	0.574	1
SELPLG	C15orf52	0.576	1
SELPLG	Amp_6p21.1	0.576	1
SELPLG	Del_3q26.31	0.576	1
SELPLG	Del_6q26	0.576	1
SELPLG	Del_8q11.1	0.576	1
RHOA	SMAD2	0.576	1
RHOA	SLC26A8	0.576	1
RHOA	Amp_19q13.11	0.576	1
RHOA	Del_19p13.3	0.576	1
SMAD2	Amp_6p21.1	0.576	1
SMAD2	Del_3q26.31	0.576	1
SMAD2	Del_6q26	0.576	1
SMAD2	Del_8q11.1	0.576	1
SLC26A8	Amp_6p21.1	0.576	1
SLC26A8	Del_3q26.31	0.576	1
SLC26A8	Del_6q26	0.576	1
SLC26A8	Del_8q11.1	0.576	1
C15orf52	Amp_19q13.11	0.576	1
C15orf52	Del_9p21.3	0.576	1
C15orf52	Del_19p13.3	0.576	1
Amp_6p21.1	Amp_19q13.11	0.576	1
Amp_6p21.1	Del_9p21.3	0.576	1
Amp_19q13.11	Del_6q26	0.576	1
MLH1	SMAD2	0.577	1
SELPLG	Del_1p36.11	0.577	1
KDM6A	ZBTB20	0.577	1
DIP2B	1q-Amp	0.577	1
ECT2	Amp_8q24.21	0.577	1
ECT2	Del_8p22	0.577	1
ALDH1A3	Amp_8q24.21	0.577	1
LINGO4	14q-Del	0.577	1
PLEKHF2	14q-Del	0.577	1
PCBP1	14q-Del	0.577	1
Amp_8q24.21	Del_17q24.3	0.577	1
Amp_13q22.1	Del_3p14.2	0.577	1
BCOR	Del_7q31.1	0.578	1
CDH1	Del_4q35.1	0.578	1
WNT1	DIP2B	0.578	1
SELPLG	21q-Del	0.578	1
SELPLG	Del_3p14.2	0.578	1
KDM6A	TMEM126A	0.578	1
KDM6A	Del_7q31.1	0.578	1
DIP2B	PTGDR	0.578	1
ASXL1	8q-Amp	0.578	1
SMAD2	4p-Del	0.578	1
SMAD2	Amp_17q12	0.578	1
SMAD2	Del_3p14.2	0.578	1
C14orf184	18q-Del	0.578	1
C14orf184	Amp_20p11.21	0.578	1
SLC26A8	21q-Del	0.578	1
SLC26A8	Amp_17q12	0.578	1
21q-Del	Amp_19q13.11	0.578	1
4p-Del	Amp_19q13.11	0.578	1
APC	8p-Del	0.579	1
TXNDC2	Amp_20q11.21	0.579	1
NTAN1	1q-Amp	0.579	1
BMPR2	NR1H3	0.579	1
ASXL1	Del_22q13.32	0.579	1
ZBTB20	PLEKHF2	0.579	1
ZBTB20	PCBP1	0.579	1
ZBTB20	Del_12p13.2	0.579	1
IDH1	Del_21q11.2	0.579	1
ECT2	Del_21q11.2	0.579	1
KIAA1586	1q-Amp	0.579	1
LINGO4	1q-Amp	0.579	1
C14orf43	Del_22q13.32	0.579	1
PLEKHF2	1q-Amp	0.579	1
GRB2	Del_18p11.31	0.579	1
PCBP1	1q-Amp	0.579	1
Amp_16p11.2	Del_21q11.2	0.579	1
NTAN1	SMAD4	0.58	1
ATXN3L	Del_5q12.1	0.58	1
EGR1	CYLD	0.58	1
THOC7	SMAD4	0.58	1
DCLK2	8q-Amp	0.58	1
CYLD	GRB2	0.58	1
PLXNA3	Del_5q12.1	0.58	1
PCBP1	SMAD4	0.58	1
SMAD4	Del_12p13.2	0.58	1
Del_5q12.1	Del_10q21.1	0.58	1
PRKDC	PRPS1	0.581	1
Amp_12p13.33	Del_1p36.11	0.581	1
TXNDC2	18p-Del	0.582	1
SELPLG	Del_8p23.2	0.582	1
RPTN	22q-Del	0.582	1
RPTN	Del_4q22.1	0.582	1
RBM44	Del_4q22.1	0.582	1
DCLK2	22q-Del	0.582	1
DCLK2	Del_4q22.1	0.582	1
Amp_6p21.1	Del_17p12	0.582	1
Amp_19q13.11	Del_8p23.2	0.582	1
PTEN	IQCD	0.583	1
PTEN	Del_12p13.2	0.583	1
C14orf184	Amp_13q12.13	0.583	1
TXNDC2	Del_10q25.2	0.584	1
TXNDC2	Del_16q23.1	0.584	1
TOP2B	Del_10q25.2	0.584	1
DCLK2	Del_8p23.2	0.584	1
CYLD	15q-Del	0.584	1
17p-Del	Amp_6p21.1	0.584	1
SOX9	GPATCH8	0.585	1
SOX9	NAA25	0.585	1
SOX9	RLIM	0.585	1
SOX9	17q-Amp	0.585	1
SOX9	Del_6p25.3	0.585	1
RHOA	ALPK2	0.585	1
RHOA	Del_15q22.33	0.585	1
ATXN3L	16p-Amp	0.585	1
ATXN3L	5q-Del	0.585	1
RBMX	16p-Amp	0.585	1
RBMX	5q-Del	0.585	1
ALPK2	Del_8q11.1	0.585	1
GMPS	16p-Amp	0.585	1
GMPS	5q-Del	0.585	1
L1TD1	16p-Amp	0.585	1
L1TD1	5q-Del	0.585	1
C2orf29	16p-Amp	0.585	1
C2orf29	5q-Del	0.585	1
FKBP9	16p-Amp	0.585	1
FKBP9	5q-Del	0.585	1
MAP4K3	16p-Amp	0.585	1
MAP4K3	5q-Del	0.585	1
KCTD3	16p-Amp	0.585	1
KCTD3	5q-Del	0.585	1
IDH2	16p-Amp	0.585	1
IDH2	5q-Del	0.585	1
PLXNA3	16p-Amp	0.585	1
PLXNA3	5q-Del	0.585	1
C15orf52	Amp_12p13.33	0.585	1
16p-Amp	Del_10q21.1	0.585	1
1q-Amp	Del_14q31.1	0.585	1
Amp_6p21.1	Del_15q22.33	0.585	1
Amp_12p13.33	Del_3q26.31	0.585	1
Del_3q26.31	Del_5q22.2	0.585	1
Del_5q22.2	Del_6q26	0.585	1
CRIPAK	Del_1p33	0.586	1
MPHOSPH10	Amp_11p15.5	0.586	1
IDH1	Amp_11p15.5	0.586	1
IDH1	Del_1p33	0.586	1
C11orf30	Amp_17q24.1	0.586	1
ALDH1A3	Del_1p33	0.586	1
CYLD	Amp_17q24.1	0.586	1
CYLD	Amp_20p11.21	0.586	1
Amp_16p11.2	Del_1p33	0.586	1
Del_1p33	Del_17q24.3	0.586	1
IQCD	Del_8p23.2	0.587	1
PLEKHF2	Del_8p23.2	0.587	1
Amp_11p15.5	Del_5q22.2	0.587	1
Amp_11p15.5	Del_15q22.33	0.587	1
WNT1	SMAD4	0.588	1
FBXW7	CYSLTR2	0.588	1
UBQLN2	Amp_8p11.21	0.588	1
IQCD	Amp_8p11.21	0.588	1
GGT1	SLK	0.588	1
GGT1	Del_16q23.1	0.588	1
ATG5	SLK	0.588	1
ATG5	12q-Amp	0.588	1
ATG5	Del_10q25.2	0.588	1
ATG5	Del_16q23.1	0.588	1
PRPS1	SLK	0.588	1
PRPS1	Del_10q25.2	0.588	1
TMEM126A	SMAD4	0.588	1
SLK	Amp_17p11.2	0.588	1
SMAD4	8q-Amp	0.588	1
SMAD4	Del_7q31.1	0.588	1
8p-Del	Amp_12p13.33	0.588	1
Amp_17p11.2	Del_10q25.2	0.588	1
Amp_17p11.2	Del_16q23.1	0.588	1
Del_6p25.3	Del_18q22.1	0.588	1
FAM123B	Del_16p13.3	0.589	1
NF2	GGT1	0.589	1
SLK	14q-Del	0.589	1
8p-Amp	Del_5q21.1	0.589	1
14q-Del	Del_10q25.2	0.589	1
21q-Del	Del_8p22	0.589	1
CRIPAK	7q-Amp	0.59	1
MAPK6	7q-Amp	0.59	1
NF1	IDH2	0.59	1
ALDH1A3	7q-Amp	0.59	1
HPS3	4q-Del	0.59	1
7p-Amp	Del_3p26.1	0.59	1
7p-Amp	Del_10q21.1	0.59	1
Amp_13q12.13	Amp_19q13.11	0.59	1
ACVR1B	PTGDR	0.591	1
ACVR1B	TMEM126A	0.591	1
ACVR1B	Del_3p14.2	0.591	1
CDH1	Amp_19q13.11	0.591	1
CDH1	Del_19p13.3	0.591	1
WNT1	Del_10q23.31	0.591	1
ALG12	Del_10q23.31	0.591	1
PTGDR	Del_10q23.31	0.591	1
20p-Amp	Del_22q13.32	0.591	1
Amp_20p11.21	Del_10q23.31	0.591	1
Del_7q31.1	Del_10q23.31	0.591	1
FAM123B	RB1	0.592	1
PLAGL2	Del_5q12.1	0.593	1
C14orf184	Del_5q12.1	0.593	1
16p-Amp	Del_4q35.1	0.593	1
RNF43	Amp_8p11.23	0.594	1
TXNDC2	Del_1p36.11	0.594	1
STARD3NL	OR4D10	0.594	1
STARD3NL	17q-Amp	0.594	1
MVK	DCLK2	0.594	1
RPTN	NAA25	0.594	1
RPTN	RLIM	0.594	1
RPTN	17q-Amp	0.594	1
RPTN	1p-Del	0.594	1
RBM44	RLIM	0.594	1
RBM44	17q-Amp	0.594	1
RBM44	1p-Del	0.594	1
RBM44	Del_6p25.3	0.594	1
DCLK2	17q-Amp	0.594	1
DCLK2	1p-Del	0.594	1
PTGDR	Del_8p23.2	0.594	1
17q-Amp	Del_15q11.2	0.594	1
8q-Amp	Del_15q11.2	0.594	1
Del_7q31.1	Del_8p23.2	0.594	1
APC	SETD2	0.595	1
APC	8p-Amp	0.595	1
GPATCH8	Amp_8p11.21	0.595	1
C14orf184	Amp_13q22.1	0.595	1
ATP6V1B1	Amp_8p11.21	0.595	1
Amp_8p11.21	Del_6p25.3	0.595	1
FAM123B	Del_15q11.2	0.597	1
B2M	Amp_6p21.1	0.597	1
B2M	Del_3q26.31	0.597	1
B2M	Del_6q26	0.597	1
B2M	Del_8q11.1	0.597	1
NTAN1	CRIPAK	0.597	1
NTAN1	Amp_16p11.2	0.597	1
NTAN1	Del_17q24.3	0.597	1
CRIPAK	THOC7	0.597	1
CRIPAK	PLEKHF2	0.597	1
CRIPAK	PCBP1	0.597	1
MAPK6	THOC7	0.597	1
MAPK6	Del_12p13.2	0.597	1
RHOA	SETD2	0.597	1
RHOA	8p-Amp	0.597	1
RHOA	Amp_16q12.1	0.597	1
P2RY13	Amp_6p21.1	0.597	1
P2RY13	Del_6q26	0.597	1
P2RY13	Del_8q11.1	0.597	1
RBMX	Del_1p13.1	0.597	1
NR1H3	Del_3q26.31	0.597	1
NR1H3	Del_6q26	0.597	1
NR1H3	Del_8q11.1	0.597	1
MPHOSPH10	TPRKB	0.597	1
MPHOSPH10	THOC7	0.597	1
MPHOSPH10	IQCD	0.597	1
MPHOSPH10	PLEKHF2	0.597	1
MPHOSPH10	20p-Amp	0.597	1
MPHOSPH10	Del_12p13.2	0.597	1
TPRKB	IDH1	0.597	1
TPRKB	Amp_16p11.2	0.597	1
TPRKB	Del_17q24.3	0.597	1
IDH1	THOC7	0.597	1
IDH1	IQCD	0.597	1
IDH1	PLEKHF2	0.597	1
IDH1	Del_12p13.2	0.597	1
SETD2	Amp_6p21.1	0.597	1
SETD2	Del_6q26	0.597	1
SETD2	Del_8q11.1	0.597	1
EGR1	8q-Amp	0.597	1
ECT2	THOC7	0.597	1
ECT2	KIAA1586	0.597	1
ECT2	PCBP1	0.597	1
ECT2	Del_12p13.2	0.597	1
DDX26B	Amp_6p21.1	0.597	1
DDX26B	Del_3q26.31	0.597	1
DDX26B	Del_6q26	0.597	1
DDX26B	Del_8q11.1	0.597	1
THOC7	C14orf43	0.597	1
UBQLN2	Amp_16p11.2	0.597	1
UBQLN2	Del_17q24.3	0.597	1
ALDH1A3	PCBP1	0.597	1
ALDH1A3	Del_12p13.2	0.597	1
KIAA1586	Amp_16p11.2	0.597	1
KIAA1586	Del_17q24.3	0.597	1
L1TD1	Del_1p13.1	0.597	1
LINGO4	Amp_16p11.2	0.597	1
LINGO4	Del_17q24.3	0.597	1
C14orf43	PCBP1	0.597	1
C14orf43	Del_12p13.2	0.597	1
IQCD	Amp_16p11.2	0.597	1
IQCD	Del_17q24.3	0.597	1
PLEKHF2	Del_17q24.3	0.597	1
FKBP9	Del_1p13.1	0.597	1
CYSLTR2	C15orf52	0.597	1
CYSLTR2	Del_6q26	0.597	1
CYSLTR2	Del_8q11.1	0.597	1
PLXNA3	Del_1p13.1	0.597	1
C15orf52	8p-Amp	0.597	1
C15orf52	Amp_16q12.1	0.597	1
PCBP1	Amp_16p11.2	0.597	1
1q-Amp	Del_10q23.31	0.597	1
Amp_6p21.1	Amp_16q12.1	0.597	1
Amp_16q12.1	Del_3q26.31	0.597	1
FAM123B	NTAN1	0.598	1
FAM123B	TPRKB	0.598	1
FAM123B	THOC7	0.598	1
FAM123B	UBQLN2	0.598	1
FAM123B	PCBP1	0.598	1
ASXL1	Del_1p13.1	0.598	1
DCLK2	7p-Amp	0.598	1
GGT1	8p-Del	0.598	1
ATG5	8p-Del	0.598	1
APC	ARID1A	0.599	1
STARD3NL	Amp_8p11.23	0.599	1
CDH1	Amp_8p11.21	0.6	1
MLH1	FBXW7	0.6	1
CTNNB1	Del_4q22.1	0.6	1
PIK3R1	Del_15q11.2	0.6	1
Amp_13q22.1	Del_5q22.2	0.6	1
APC	SOX9	0.601	1
EGR1	Del_15q21.1	0.601	1
RB1	L1TD1	0.601	1
RB1	IDH2	0.601	1
8p-Del	Del_1p36.11	0.601	1
Amp_20p11.23	Del_10q23.31	0.601	1
APC	B2M	0.602	1
APC	Amp_16q12.1	0.602	1
IDH1	Amp_8p11.21	0.602	1
ALDH1A3	Amp_8p11.21	0.602	1
Amp_8p11.21	Amp_16p11.2	0.602	1
Amp_13q12.13	Del_10q23.31	0.602	1
ARID1A	Del_9p21.3	0.603	1
WNT1	4q-Del	0.603	1
FMN2	IDH2	0.603	1
FMN2	Del_16p13.3	0.603	1
ATXN3L	ROS1	0.603	1
ALG12	4q-Del	0.603	1
ROS1	Del_10q21.1	0.603	1
CTNNB1	5q-Del	0.603	1
TOP2B	GGT1	0.603	1
TOP2B	ATG5	0.603	1
TOP2B	Amp_17p11.2	0.603	1
GGT1	Amp_5p13.2	0.603	1
ATG5	Amp_5p13.2	0.603	1
PTGDR	4q-Del	0.603	1
Amp_5p13.2	Amp_17p11.2	0.603	1
SELPLG	16p-Amp	0.604	1
SMAD2	5q-Del	0.604	1
PLAGL2	Del_1p13.1	0.604	1
C14orf184	Del_1p13.1	0.604	1
SLC26A8	16p-Amp	0.604	1
SLC26A8	5q-Del	0.604	1
16p-Amp	Amp_19q13.11	0.604	1
5q-Del	Amp_19q13.11	0.604	1
5q-Del	Del_9p21.3	0.604	1
BCOR	ECT2	0.605	1
KDM6A	ALDH1A3	0.605	1
KDM6A	Amp_16p11.2	0.605	1
KDM6A	Del_17q24.3	0.605	1
DIP2B	C14orf43	0.605	1
DIP2B	Amp_16p11.2	0.605	1
DIP2B	Del_17q24.3	0.605	1
NF2	Amp_17q24.1	0.606	1
ATM	17q-Amp	0.606	1
ATM	Del_6p25.3	0.606	1
Del_6p25.3	Del_18p11.31	0.606	1
1q-Amp	18p-Del	0.607	1
MLH1	8p-Amp	0.608	1
NR1H3	20p-Amp	0.608	1
SETD2	Del_15q15.2	0.608	1
RB1	DCLK2	0.608	1
BCL9	Del_16q23.1	0.608	1
CYLD	Del_10q25.2	0.608	1
CYSLTR2	20p-Amp	0.608	1
15q-Del	Amp_8p11.23	0.608	1
Amp_16p11.2	Del_4q35.1	0.608	1
TXNDC2	Amp_8p11.21	0.609	1
MLH1	Amp_11p15.5	0.609	1
ROS1	THOC7	0.609	1
ROS1	PCBP1	0.609	1
PIK3R1	Del_8p22	0.609	1
MLH1	Del_15q21.1	0.61	1
RHOA	15q-Del	0.61	1
ASXL1	Del_6q26	0.61	1
ASXL1	Del_8q11.1	0.61	1
15q-Del	Amp_6p21.1	0.61	1
B2M	21q-Del	0.611	1
MLH1	GRB2	0.611	1
SELPLG	Del_5q12.1	0.611	1
P2RY13	4p-Del	0.611	1
P2RY13	Amp_17q12	0.611	1
ASXL1	Del_5q21.1	0.611	1
NR1H3	21q-Del	0.611	1
EGR1	Del_15q15.2	0.611	1
DDX26B	21q-Del	0.611	1
DDX26B	Del_3p14.2	0.611	1
CYSLTR2	Amp_17q12	0.611	1
GRB2	Del_1p36.11	0.611	1
21q-Del	Amp_16q12.1	0.611	1
CDH1	16p-Amp	0.612	1
NF2	Amp_8p11.23	0.612	1
RBMX	PTCH1	0.612	1
EGR1	1q-Amp	0.612	1
EGR1	7p-Amp	0.612	1
THOC7	Del_18q12.2	0.612	1
RB1	Del_8p23.2	0.612	1
PTCH1	MAP4K3	0.612	1
C14orf184	18p-Del	0.612	1
GRB2	1q-Amp	0.612	1
7q-Amp	Amp_11p15.5	0.612	1
7q-Amp	Del_1p33	0.612	1
Amp_8p11.23	Del_14q31.1	0.612	1
PTEN	C15orf52	0.613	1
NTAN1	Del_3p26.1	0.614	1
NTAN1	Del_10q21.1	0.614	1
NTAN1	Del_16p13.3	0.614	1
ATXN3L	KIAA1586	0.614	1
ATXN3L	PCBP1	0.614	1
ATXN3L	Del_12p13.2	0.614	1
RBMX	THOC7	0.614	1
RBMX	LINGO4	0.614	1
RBMX	IQCD	0.614	1
RBMX	PLEKHF2	0.614	1
RBMX	PCBP1	0.614	1
RBMX	Del_12p13.2	0.614	1
TPRKB	KCTD3	0.614	1
TPRKB	IDH2	0.614	1
TPRKB	Del_3p26.1	0.614	1
TPRKB	Del_10q21.1	0.614	1
THOC7	C2orf29	0.614	1
THOC7	KCTD3	0.614	1
THOC7	IDH2	0.614	1
THOC7	Del_3p26.1	0.614	1
THOC7	Del_16p13.3	0.614	1
UBQLN2	Del_3p26.1	0.614	1
UBQLN2	Del_16p13.3	0.614	1
GMPS	IQCD	0.614	1
GMPS	Del_12p13.2	0.614	1
KIAA1586	C2orf29	0.614	1
KIAA1586	PLXNA3	0.614	1
KIAA1586	Del_10q21.1	0.614	1
KIAA1586	Del_16p13.3	0.614	1
L1TD1	PCBP1	0.614	1
L1TD1	Del_12p13.2	0.614	1
C2orf29	Del_12p13.2	0.614	1
LINGO4	Del_3p26.1	0.614	1
LINGO4	Del_16p13.3	0.614	1
IQCD	MAP4K3	0.614	1
IQCD	Del_3p26.1	0.614	1
IQCD	Del_10q21.1	0.614	1
IQCD	Del_16p13.3	0.614	1
PLEKHF2	MAP4K3	0.614	1
PLEKHF2	IDH2	0.614	1
PLEKHF2	Del_3p26.1	0.614	1
PLEKHF2	Del_16p13.3	0.614	1
FKBP9	PCBP1	0.614	1
FKBP9	Del_12p13.2	0.614	1
MAP4K3	PCBP1	0.614	1
MAP4K3	Del_12p13.2	0.614	1
KCTD3	Del_12p13.2	0.614	1
IDH2	PCBP1	0.614	1
IDH2	Del_12p13.2	0.614	1
PLXNA3	PCBP1	0.614	1
PLXNA3	Del_12p13.2	0.614	1
PCBP1	Del_10q21.1	0.614	1
PCBP1	Del_16p13.3	0.614	1
Del_10q21.1	Del_12p13.2	0.614	1
BMPR2	1p-Del	0.615	1
RBMX	Del_1p33	0.615	1
PLAGL2	Amp_11p15.5	0.615	1
PLAGL2	Del_1p33	0.615	1
PTEN	Amp_12p13.33	0.615	1
GMPS	Del_1p33	0.615	1
L1TD1	Amp_11p15.5	0.615	1
C2orf29	Amp_11p15.5	0.615	1
C14orf184	Amp_11p15.5	0.615	1
MAP4K3	Amp_11p15.5	0.615	1
IDH2	Amp_11p15.5	0.615	1
IDH2	Del_1p33	0.615	1
PLXNA3	Amp_11p15.5	0.615	1
Amp_11p15.5	Del_16p13.3	0.615	1
BCOR	Del_15q22.33	0.616	1
WNT1	Amp_17q24.1	0.616	1
MAPK6	Amp_8p11.23	0.616	1
ALG12	Amp_17q24.1	0.616	1
MPHOSPH10	Amp_8p11.23	0.616	1
IDH1	Amp_8p11.23	0.616	1
NLRC4	Del_7q31.1	0.616	1
C14orf43	Amp_8p11.23	0.616	1
CHD3	Del_7q31.1	0.616	1
ATG5	Del_15q11.2	0.616	1
PRPS1	Del_15q11.2	0.616	1
PTGDR	Amp_17q24.1	0.616	1
BCORL1	Del_7q31.1	0.616	1
TMEM126A	Amp_17q24.1	0.616	1
8q-Amp	Del_4q22.1	0.616	1
Amp_8p11.23	Amp_16p11.2	0.616	1
Amp_8p11.23	Del_17q24.3	0.616	1
Amp_8p11.21	Del_10q23.31	0.616	1
CDH1	22q-Del	0.617	1
CDH1	Del_4q22.1	0.617	1
CRIPAK	13q-Amp	0.617	1
SETD2	8p-Del	0.617	1
C11orf30	GGT1	0.617	1
C11orf30	PRPS1	0.617	1
C11orf30	Amp_17p11.2	0.617	1
RBM44	PTCH1	0.617	1
L1TD1	Del_22q13.32	0.617	1
C2orf29	Del_21q11.2	0.617	1
C2orf29	Del_22q13.32	0.617	1
BCL9	GGT1	0.617	1
CYLD	GGT1	0.617	1
CYLD	ATG5	0.617	1
CYLD	Amp_17p11.2	0.617	1
KCTD3	Del_21q11.2	0.617	1
IDH2	Del_21q11.2	0.617	1
FAM123B	FBXW7	0.618	1
TXNDC2	17p-Del	0.618	1
ZFP36L2	Amp_6p21.1	0.618	1
RHOA	OR4D10	0.618	1
RHOA	MVK	0.618	1
RHOA	ATP6V1B1	0.618	1
RHOA	RLIM	0.618	1
RHOA	17q-Amp	0.618	1
RHOA	1p-Del	0.618	1
OR4D10	C15orf52	0.618	1
OR4D10	Amp_6p21.1	0.618	1
OR4D10	Del_6q26	0.618	1
OR4D10	Del_8q11.1	0.618	1
MVK	Amp_6p21.1	0.618	1
MVK	Del_3q26.31	0.618	1
MVK	Del_6q26	0.618	1
ZBTB20	Amp_12p13.33	0.618	1
ZBTB20	Del_5q22.2	0.618	1
GPATCH8	Amp_6p21.1	0.618	1
GPATCH8	Del_3q26.31	0.618	1
GPATCH8	Del_6q26	0.618	1
GPATCH8	Del_8q11.1	0.618	1
ATP6V1B1	Amp_6p21.1	0.618	1
ATP6V1B1	Del_8q11.1	0.618	1
NAA25	Amp_6p21.1	0.618	1
NAA25	Del_3q26.31	0.618	1
NAA25	Del_6q26	0.618	1
NAA25	Del_8q11.1	0.618	1
RLIM	C15orf52	0.618	1
RLIM	Del_6q26	0.618	1
C15orf52	17q-Amp	0.618	1
C15orf52	1p-Del	0.618	1
17q-Amp	Amp_6p21.1	0.618	1
17q-Amp	Del_3q26.31	0.618	1
17q-Amp	Del_6q26	0.618	1
17q-Amp	Del_8q11.1	0.618	1
1q-Amp	Del_15q22.33	0.618	1
1p-Del	Amp_6p21.1	0.618	1
Amp_8q24.21	Del_10q25.2	0.618	1
Del_6p25.3	Del_8q11.1	0.618	1
NTAN1	Del_21q11.2	0.619	1
THOC7	Del_22q13.32	0.619	1
UBQLN2	Del_21q11.2	0.619	1
KIAA1586	Del_21q11.2	0.619	1
KIAA1586	Del_22q13.32	0.619	1
LINGO4	Del_21q11.2	0.619	1
LINGO4	Del_22q13.32	0.619	1
IQCD	Del_22q13.32	0.619	1
PCBP1	Del_21q11.2	0.619	1
APC	Del_21q11.2	0.62	1
MLH1	Amp_16q12.1	0.62	1
NR1H3	Del_1p36.11	0.62	1
NLRC4	Del_22q13.32	0.62	1
PIK3R1	Del_15q22.33	0.62	1
Amp_16q12.1	Del_15q15.2	0.62	1
Amp_17q24.1	Del_22q13.32	0.62	1
TP53	GGT1	0.621	1
FAM123B	12q-Amp	0.621	1
FAM123B	Del_10q25.2	0.621	1
FAM123B	Del_16q23.1	0.621	1
MLH1	Del_22q13.32	0.621	1
MAPK6	Amp_20p11.21	0.621	1
FBXW7	8q-Amp	0.621	1
RHOA	20p-Amp	0.622	1
SOX9	STARD3NL	0.623	1
SOX9	TOP2B	0.623	1
RPTN	Amp_20p11.21	0.623	1
DCLK2	Amp_20p11.21	0.623	1
Amp_12p13.33	Del_18q21.2	0.623	1
Amp_20p11.23	Del_15q21.1	0.623	1
APC	IQCD	0.624	1
ACVR1B	CRIPAK	0.624	1
ACVR1B	IDH1	0.624	1
B2M	16p-Amp	0.624	1
B2M	5q-Del	0.624	1
BMPR2	Amp_8p11.23	0.624	1
P2RY13	16p-Amp	0.624	1
P2RY13	5q-Del	0.624	1
NR1H3	16p-Amp	0.624	1
NR1H3	5q-Del	0.624	1
MPHOSPH10	Del_10q23.31	0.624	1
DDX26B	16p-Amp	0.624	1
DDX26B	5q-Del	0.624	1
CYSLTR2	16p-Amp	0.624	1
14q-Del	Amp_5p13.2	0.624	1
ASXL1	Del_1p33	0.625	1
C11orf30	PTEN	0.625	1
APC	ALPK2	0.626	1
BCOR	C14orf184	0.626	1
SMAD2	8q-Amp	0.626	1
CYSLTR2	13q-Amp	0.626	1
8q-Amp	Del_9p21.3	0.626	1
Amp_13q22.1	Del_10q23.31	0.626	1
1q-Amp	Del_18p11.31	0.627	1
ALPK2	16p-Amp	0.628	1
16p-Amp	Del_5q22.2	0.628	1
5q-Del	Amp_12p13.33	0.628	1
FAM123B	SELPLG	0.629	1
FAM123B	Amp_19q13.11	0.629	1
FAM123B	Del_19p13.3	0.629	1
WNT1	Del_10q25.2	0.629	1
CRIPAK	GRB2	0.629	1
ALG12	SLK	0.629	1
IDH1	GRB2	0.629	1
EGR1	Amp_16p11.2	0.629	1
EGR1	Del_17q24.3	0.629	1
PTGDR	12q-Amp	0.629	1
PTGDR	Del_10q25.2	0.629	1
TMEM126A	12q-Amp	0.629	1
TMEM126A	Del_16q23.1	0.629	1
GRB2	Amp_16p11.2	0.629	1
GRB2	Del_17q24.3	0.629	1
SLK	Del_7q31.1	0.629	1
Del_7q31.1	Del_10q25.2	0.629	1
RNF43	THOC7	0.63	1
RNF43	PCBP1	0.63	1
TXNDC2	BCL9	0.63	1
BCOR	Del_1p13.1	0.63	1
CYLD	Amp_5p13.2	0.63	1
PTGDR	Amp_20q13.12	0.63	1
8q-Amp	Del_15q21.1	0.63	1
APC	C11orf30	0.631	1
BMPR2	12q-Amp	0.631	1
ATM	7p-Amp	0.631	1
20p-Amp	Del_10q23.31	0.631	1
RHOA	7q-Amp	0.632	1
ALG12	Amp_20p11.23	0.632	1
HPS3	GGT1	0.632	1
HPS3	12q-Amp	0.632	1
HPS3	Amp_17p11.2	0.632	1
PRPS1	Amp_20p11.21	0.632	1
PTGDR	Amp_20p11.23	0.632	1
Amp_17p11.2	Amp_20p11.21	0.632	1
ACVR1B	Del_5q12.1	0.633	1
BCOR	Del_3p26.1	0.633	1
NTAN1	SELPLG	0.633	1
NTAN1	Amp_19q13.11	0.633	1
NTAN1	Del_9p21.3	0.633	1
NTAN1	Del_19p13.3	0.633	1
WNT1	7q-Amp	0.633	1
SELPLG	UBQLN2	0.633	1
SELPLG	PCBP1	0.633	1
SELPLG	Del_12p13.2	0.633	1
KDM6A	PLXNA3	0.633	1
KDM6A	Del_16p13.3	0.633	1
DIP2B	RBMX	0.633	1
DIP2B	Del_3p26.1	0.633	1
SMAD2	TPRKB	0.633	1
SMAD2	THOC7	0.633	1
SMAD2	IQCD	0.633	1
SMAD2	PCBP1	0.633	1
SMAD2	Del_12p13.2	0.633	1
ALG12	7q-Amp	0.633	1
TPRKB	Amp_19q13.11	0.633	1
TPRKB	Del_19p13.3	0.633	1
SETD2	1q-Amp	0.633	1
PTEN	7q-Amp	0.633	1
THOC7	SLC26A8	0.633	1
THOC7	Del_9p21.3	0.633	1
THOC7	Del_19p13.3	0.633	1
UBQLN2	Amp_19q13.11	0.633	1
UBQLN2	Del_9p21.3	0.633	1
UBQLN2	Del_19p13.3	0.633	1
KIAA1586	Amp_19q13.11	0.633	1
KIAA1586	Del_9p21.3	0.633	1
KIAA1586	Del_19p13.3	0.633	1
LINGO4	Del_9p21.3	0.633	1
LINGO4	Del_19p13.3	0.633	1
SLC26A8	IQCD	0.633	1
SLC26A8	PCBP1	0.633	1
SLC26A8	Del_12p13.2	0.633	1
IQCD	Amp_19q13.11	0.633	1
IQCD	Del_9p21.3	0.633	1
IQCD	Del_19p13.3	0.633	1
PLEKHF2	Amp_19q13.11	0.633	1
PLEKHF2	Del_9p21.3	0.633	1
TMEM126A	7q-Amp	0.633	1
PCBP1	Amp_19q13.11	0.633	1
PCBP1	Amp_20p11.23	0.633	1
7q-Amp	Del_7q31.1	0.633	1
Amp_19q13.11	Del_12p13.2	0.633	1
BCOR	SETD2	0.634	1
MLH1	Del_15q15.2	0.634	1
NF1	Amp_8p11.23	0.634	1
TXNDC2	Amp_20q13.12	0.635	1
MLH1	15q-Del	0.635	1
ASXL1	Del_1p36.11	0.635	1
ASXL1	Del_15q15.2	0.635	1
CYLD	Del_5q21.1	0.635	1
SELPLG	18p-Del	0.636	1
ATXN3L	7q-Amp	0.636	1
RB1	Del_1p33	0.636	1
NLRC4	1q-Amp	0.636	1
BCORL1	1q-Amp	0.636	1
7q-Amp	Del_3p26.1	0.636	1
ACVR1B	C14orf184	0.637	1
KDM6A	Del_8p23.2	0.637	1
PRKDC	8p-Del	0.637	1
FBXW7	BCL9	0.637	1
PLAGL2	Del_10q23.31	0.637	1
IDH1	SMAD4	0.637	1
SMAD4	Del_17q24.3	0.637	1
PTEN	17q-Amp	0.638	1
PTEN	Del_6p25.3	0.638	1
ATG5	Amp_13q12.13	0.638	1
PRPS1	Amp_13q12.13	0.638	1
PTGDR	Del_18q22.1	0.638	1
13q-Amp	Del_6q26	0.638	1
RB1	Del_8p22	0.639	1
SELPLG	Amp_20p11.23	0.64	1
KDM6A	8q-Amp	0.64	1
RHOA	RPTN	0.64	1
RHOA	RBM44	0.64	1
RHOA	DCLK2	0.64	1
STARD3NL	Amp_6p21.1	0.64	1
STARD3NL	Del_6q26	0.64	1
SETD2	16p-Amp	0.64	1
SETD2	5q-Del	0.64	1
RPTN	Amp_6p21.1	0.64	1
RPTN	Del_3q26.31	0.64	1
RPTN	Del_6q26	0.64	1
RPTN	Del_8q11.1	0.64	1
RBM44	Amp_6p21.1	0.64	1
RBM44	Del_3q26.31	0.64	1
RBM44	Del_6q26	0.64	1
DCLK2	Amp_6p21.1	0.64	1
DCLK2	Del_3q26.31	0.64	1
DCLK2	Del_6q26	0.64	1
DCLK2	Del_8q11.1	0.64	1
16p-Amp	8p-Amp	0.64	1
Del_6p25.3	Del_17p12	0.64	1
MLH1	DIP2B	0.641	1
MAPK6	8p-Del	0.641	1
MPHOSPH10	8p-Del	0.641	1
THOC7	Del_4q35.1	0.641	1
IQCD	Del_4q35.1	0.641	1
PCBP1	Del_4q35.1	0.641	1
8p-Del	Amp_16p11.2	0.641	1
TP53	OR4D10	0.642	1
TXNDC2	WNT1	0.642	1
TXNDC2	TMEM126A	0.642	1
TXNDC2	7q-Amp	0.642	1
SELPLG	FMN2	0.642	1
FMN2	SMAD2	0.642	1
NF1	Del_22q13.32	0.642	1
IDH1	4q-Del	0.642	1
ALPK2	Amp_8p11.21	0.642	1
ROS1	Del_19p13.3	0.642	1
ECT2	4q-Del	0.642	1
TOP2B	TMEM126A	0.642	1
C14orf43	4q-Del	0.642	1
CYSLTR2	Del_5q12.1	0.642	1
PTGDR	Amp_5p13.2	0.642	1
BCORL1	21q-Del	0.642	1
BCORL1	4p-Del	0.642	1
Amp_5p13.2	Del_7q31.1	0.642	1
APC	21q-Del	0.643	1
CDH1	CYSLTR2	0.643	1
13q-Amp	Del_3p14.2	0.643	1
Del_3q26.31	Del_18q12.2	0.643	1
ZFP36L2	16p-Amp	0.644	1
ZFP36L2	4p-Del	0.644	1
ZFP36L2	5q-Del	0.644	1
NF2	12q-Amp	0.644	1
OR4D10	5q-Del	0.644	1
OR4D10	Del_3p14.2	0.644	1
MVK	16p-Amp	0.644	1
MVK	5q-Del	0.644	1
ATXN3L	Del_4q35.1	0.644	1
SMAD2	Del_1p33	0.644	1
GPATCH8	16p-Amp	0.644	1
GPATCH8	21q-Del	0.644	1
GPATCH8	4p-Del	0.644	1
GPATCH8	5q-Del	0.644	1
ATP6V1B1	16p-Amp	0.644	1
ATP6V1B1	5q-Del	0.644	1
NAA25	16p-Amp	0.644	1
NAA25	4p-Del	0.644	1
NAA25	5q-Del	0.644	1
SLC26A8	Del_1p33	0.644	1
RLIM	16p-Amp	0.644	1
RLIM	4p-Del	0.644	1
RLIM	5q-Del	0.644	1
CYSLTR2	14q-Del	0.644	1
16p-Amp	1p-Del	0.644	1
16p-Amp	Del_6p25.3	0.644	1
17q-Amp	21q-Del	0.644	1
17q-Amp	5q-Del	0.644	1
17q-Amp	Del_3p14.2	0.644	1
4p-Del	Del_6p25.3	0.644	1
Amp_11p15.5	Del_9p21.3	0.644	1
Amp_17q12	Del_6p25.3	0.644	1
ATXN3L	EGR1	0.645	1
RBMX	GRB2	0.645	1
EGR1	C2orf29	0.645	1
EGR1	IDH2	0.645	1
EGR1	Del_3p26.1	0.645	1
EGR1	Del_10q21.1	0.645	1
EGR1	Del_16p13.3	0.645	1
GMPS	GRB2	0.645	1
C2orf29	GRB2	0.645	1
PIK3R1	7p-Amp	0.645	1
GRB2	Del_3p26.1	0.645	1
GRB2	Del_10q21.1	0.645	1
GRB2	Del_16p13.3	0.645	1
Amp_12p13.33	Del_10q23.31	0.645	1
ATXN3L	Amp_8q24.21	0.646	1
ATXN3L	Del_8p22	0.646	1
IDH2	Amp_8q24.21	0.646	1
8q-Amp	Del_8q11.1	0.646	1
ZBTB20	PRPS1	0.647	1
ZBTB20	Amp_17p11.2	0.647	1
ECT2	Del_8p23.2	0.647	1
GGT1	1q-Amp	0.647	1
ATG5	1q-Amp	0.647	1
PRPS1	1q-Amp	0.647	1
7p-Amp	Del_19p13.3	0.647	1
8q-Amp	Del_15q22.33	0.647	1
MGA	Del_3q26.31	0.648	1
Del_3q26.31	Del_5q21.1	0.648	1
Del_5q21.1	Del_8q11.1	0.648	1
APC	Del_9p21.3	0.649	1
WNT1	Amp_8p11.23	0.649	1
NF1	22q-Del	0.649	1
PRKDC	Del_7q31.1	0.649	1
PLAGL2	4q-Del	0.649	1
TOP2B	Amp_20p11.23	0.649	1
C14orf184	4q-Del	0.649	1
1q-Amp	15q-Del	0.649	1
Amp_20p11.23	Del_22q13.32	0.649	1
FAM123B	EGR1	0.65	1
FAM123B	GRB2	0.65	1
BMPR2	RPTN	0.65	1
ATM	Amp_8p11.21	0.65	1
TP53	ATXN3L	0.651	1
TP53	PLXNA3	0.651	1
ACVR1B	ATXN3L	0.651	1
ACVR1B	RBMX	0.651	1
ACVR1B	C2orf29	0.651	1
B2M	THOC7	0.651	1
B2M	LINGO4	0.651	1
B2M	IQCD	0.651	1
B2M	PLEKHF2	0.651	1
B2M	Del_12p13.2	0.651	1
NTAN1	CYSLTR2	0.651	1
NTAN1	Amp_16q12.1	0.651	1
P2RY13	THOC7	0.651	1
P2RY13	LINGO4	0.651	1
P2RY13	IQCD	0.651	1
P2RY13	PCBP1	0.651	1
P2RY13	Del_12p13.2	0.651	1
NR1H3	TPRKB	0.651	1
NR1H3	THOC7	0.651	1
NR1H3	UBQLN2	0.651	1
NR1H3	KIAA1586	0.651	1
NR1H3	PCBP1	0.651	1
DDX26B	THOC7	0.651	1
DDX26B	IQCD	0.651	1
DDX26B	PCBP1	0.651	1
DDX26B	Del_12p13.2	0.651	1
THOC7	CYSLTR2	0.651	1
UBQLN2	Amp_16q12.1	0.651	1
KIAA1586	Amp_16q12.1	0.651	1
LINGO4	Amp_16q12.1	0.651	1
IQCD	CYSLTR2	0.651	1
IQCD	Amp_16q12.1	0.651	1
PLEKHF2	CYSLTR2	0.651	1
PLEKHF2	Amp_16q12.1	0.651	1
CYSLTR2	Del_12p13.2	0.651	1
ATG5	Amp_13q22.1	0.651	1
KCTD3	Del_10q23.31	0.651	1
IDH2	Del_10q23.31	0.651	1
PCBP1	Amp_16q12.1	0.651	1
Amp_16q12.1	Del_12p13.2	0.651	1
SOX9	CYLD	0.652	1
MAPK6	Amp_12p13.33	0.652	1
RHOA	PRKDC	0.652	1
RHOA	Amp_8p11.23	0.652	1
PRKDC	Amp_6p21.1	0.652	1
ALPK2	Del_17q24.3	0.652	1
ECT2	Del_15q22.33	0.652	1
ALDH1A3	Del_5q22.2	0.652	1
C14orf43	Amp_12p13.33	0.652	1
17q-Amp	Del_15q21.1	0.652	1
1p-Del	Del_15q21.1	0.652	1
Amp_8p11.23	Del_3q26.31	0.652	1
Amp_8p11.23	Del_6q26	0.652	1
Amp_8p11.23	Del_8q11.1	0.652	1
Amp_12p13.33	Del_17q24.3	0.652	1
Amp_12p13.33	Del_18q22.1	0.652	1
Amp_16p11.2	Del_15q22.33	0.652	1
Del_6p25.3	Del_15q21.1	0.652	1
BCOR	15q-Del	0.653	1
HPS3	Amp_5p13.2	0.653	1
SMAD4	Amp_8p11.21	0.653	1
ATM	Amp_19q13.11	0.654	1
APC	DIP2B	0.655	1
TP53	FMN2	0.655	1
TP53	ROS1	0.655	1
SELPLG	Del_22q13.32	0.655	1
RBMX	Amp_8p11.21	0.655	1
CTNNB1	Del_15q22.33	0.655	1
SLC26A8	Del_21q11.2	0.655	1
13q-Amp	Del_10q23.31	0.655	1
8p-Amp	Del_17p12	0.655	1
Amp_8p11.21	Del_16p13.3	0.655	1
Amp_19q13.11	Del_21q11.2	0.655	1
Amp_20q12	Del_10q23.31	0.655	1
ALG12	C11orf30	0.656	1
ALG12	BCL9	0.656	1
ALG12	CYLD	0.656	1
ZBTB20	SLK	0.656	1
ZBTB20	12q-Amp	0.656	1
C11orf30	PTGDR	0.656	1
BCL9	PTGDR	0.656	1
BCL9	TMEM126A	0.656	1
CYLD	TMEM126A	0.656	1
CYLD	Del_7q31.1	0.656	1
SOX9	Del_4q22.1	0.657	1
MLH1	7q-Amp	0.657	1
SELPLG	RB1	0.657	1
SMAD2	RB1	0.657	1
ARID1A	C14orf184	0.658	1
BMPR2	Amp_5p13.2	0.658	1
CYSLTR2	Del_1p13.1	0.658	1
8p-Del	Del_16q23.1	0.658	1
PRKDC	ATXN3L	0.659	1
PRKDC	C2orf29	0.659	1
EGR1	Amp_8p11.21	0.659	1
C2orf29	Amp_8p11.23	0.659	1
MAP4K3	Amp_8p11.23	0.659	1
IDH2	Amp_8p11.23	0.659	1
4q-Del	Amp_8p11.21	0.659	1
TP53	HPS3	0.66	1
ATG5	Del_15q21.1	0.66	1
PRPS1	Del_15q21.1	0.66	1
SOX9	Del_8q11.1	0.661	1
BCOR	SELPLG	0.661	1
BCOR	Del_9p21.3	0.661	1
MLH1	22q-Del	0.661	1
SELPLG	KDM6A	0.661	1
KDM6A	Del_19p13.3	0.661	1
DIP2B	Amp_19q13.11	0.661	1
DIP2B	Del_19p13.3	0.661	1
PLAGL2	Amp_17q24.1	0.661	1
PTEN	Amp_19q13.11	0.661	1
PTEN	Del_9p21.3	0.661	1
C14orf184	CHD3	0.661	1
C14orf184	Amp_17q24.1	0.661	1
20p-Amp	Del_15q21.1	0.661	1
Amp_20p11.23	Del_15q15.2	0.661	1
ACVR1B	SETD2	0.662	1
ACVR1B	8p-Amp	0.662	1
CRIPAK	GGT1	0.662	1
CRIPAK	ATG5	0.662	1
CRIPAK	Amp_17p11.2	0.662	1
MAPK6	GGT1	0.662	1
MAPK6	Amp_17p11.2	0.662	1
MPHOSPH10	GGT1	0.662	1
IDH1	NLRC4	0.662	1
IDH1	ATG5	0.662	1
IDH1	BCORL1	0.662	1
IDH1	Amp_17p11.2	0.662	1
IDH1	Amp_17q24.1	0.662	1
SETD2	Del_10q23.31	0.662	1
ECT2	ATG5	0.662	1
ECT2	Amp_17p11.2	0.662	1
ALDH1A3	GGT1	0.662	1
ALDH1A3	Amp_17p11.2	0.662	1
NLRC4	Amp_16p11.2	0.662	1
C14orf43	ATG5	0.662	1
C14orf43	Amp_17p11.2	0.662	1
GGT1	Del_17q24.3	0.662	1
ATG5	Del_17q24.3	0.662	1
PRPS1	Amp_16p11.2	0.662	1
PRPS1	Del_17q24.3	0.662	1
BCORL1	Amp_16p11.2	0.662	1
BCORL1	Del_17q24.3	0.662	1
Amp_17p11.2	Del_17q24.3	0.662	1
MLH1	17q-Amp	0.663	1
NTAN1	PIK3R1	0.663	1
ZFP36L2	Del_1p36.11	0.663	1
SELPLG	EGR1	0.663	1
RHOA	NF1	0.663	1
RHOA	Amp_6p21.1	0.663	1
RHOA	Del_3q26.31	0.663	1
RHOA	Del_6q26	0.663	1
RHOA	Del_8q11.1	0.663	1
NF1	C15orf52	0.663	1
OR4D10	Del_1p36.11	0.663	1
TPRKB	PIK3R1	0.663	1
PLAGL2	Amp_8q24.21	0.663	1
EGR1	Amp_19q13.11	0.663	1
EGR1	Del_9p21.3	0.663	1
EGR1	Del_19p13.3	0.663	1
THOC7	PIK3R1	0.663	1
UBQLN2	PIK3R1	0.663	1
LINGO4	PIK3R1	0.663	1
PIK3R1	IQCD	0.663	1
PIK3R1	PCBP1	0.663	1
SLC26A8	GRB2	0.663	1
RLIM	Del_1p36.11	0.663	1
GRB2	Amp_19q13.11	0.663	1
GRB2	Del_19p13.3	0.663	1
C15orf52	Amp_6p21.1	0.663	1
C15orf52	Del_3q26.31	0.663	1
C15orf52	Del_6q26	0.663	1
C15orf52	Del_8q11.1	0.663	1
17q-Amp	Del_1p36.11	0.663	1
17q-Amp	Del_15q15.2	0.663	1
8q-Amp	Del_15q15.2	0.663	1
1p-Del	Del_15q15.2	0.663	1
Amp_6p21.1	Del_6q26	0.663	1
Amp_6p21.1	Del_8q11.1	0.663	1
Amp_17q12	Del_15q21.1	0.663	1
FMN2	Del_1p13.1	0.664	1
STARD3NL	16p-Amp	0.665	1
STARD3NL	5q-Del	0.665	1
OR4D10	Amp_8q24.21	0.665	1
OR4D10	Del_8p22	0.665	1
ATXN3L	20p-Amp	0.665	1
RPTN	16p-Amp	0.665	1
RPTN	5q-Del	0.665	1
CTNNB1	THOC7	0.665	1
CTNNB1	Del_12p13.2	0.665	1
RBM44	16p-Amp	0.665	1
RBM44	5q-Del	0.665	1
DCLK2	5q-Del	0.665	1
RLIM	Amp_8q24.21	0.665	1
Amp_8q24.21	Del_6p25.3	0.665	1
FAM123B	Amp_12p13.33	0.666	1
FAM123B	Del_15q22.33	0.666	1
CRIPAK	SETD2	0.666	1
SETD2	ALDH1A3	0.666	1
SETD2	Amp_16p11.2	0.666	1
8p-Amp	Amp_16p11.2	0.666	1
8p-Amp	Del_5q22.2	0.666	1
CTNNB1	Del_5q21.1	0.667	1
PIK3R1	15q-Del	0.667	1
Amp_8q24.21	Del_1p36.11	0.667	1
RNF43	Amp_19q13.11	0.668	1
ATG5	Del_1p36.11	0.668	1
ATG5	Del_15q15.2	0.668	1
PRPS1	Del_15q15.2	0.668	1
12q-Amp	21q-Del	0.668	1
17p-Del	Amp_12p13.33	0.668	1
FAM123B	NR1H3	0.669	1
FAM123B	CYSLTR2	0.669	1
CDH1	8p-Del	0.669	1
RBMX	4q-Del	0.669	1
C2orf29	4q-Del	0.669	1
IDH2	4q-Del	0.669	1
PLXNA3	4q-Del	0.669	1
APC	TXNDC2	0.67	1
EGR1	Del_21q11.2	0.67	1
ATG5	18p-Del	0.67	1
PTGDR	Amp_20q12	0.67	1
GRB2	SMAD4	0.67	1
BCOR	22q-Del	0.671	1
NTAN1	17q-Amp	0.671	1
NTAN1	1p-Del	0.671	1
ZFP36L2	THOC7	0.671	1
ZFP36L2	PLEKHF2	0.671	1
ZFP36L2	PCBP1	0.671	1
ZFP36L2	Del_12p13.2	0.671	1
ZFP36L2	Del_18q12.2	0.671	1
NF2	L1TD1	0.671	1
NF2	C2orf29	0.671	1
NF2	Amp_8p11.21	0.671	1
NF2	Del_16p13.3	0.671	1
OR4D10	UBQLN2	0.671	1
OR4D10	IQCD	0.671	1
OR4D10	Del_12p13.2	0.671	1
MGA	Amp_8p11.21	0.671	1
MVK	IQCD	0.671	1
MVK	PCBP1	0.671	1
MVK	Del_12p13.2	0.671	1
DIP2B	22q-Del	0.671	1
TPRKB	NAA25	0.671	1
TPRKB	17q-Amp	0.671	1
TPRKB	1p-Del	0.671	1
GPATCH8	THOC7	0.671	1
GPATCH8	IQCD	0.671	1
GPATCH8	PCBP1	0.671	1
GPATCH8	Del_12p13.2	0.671	1
THOC7	ATP6V1B1	0.671	1
THOC7	RLIM	0.671	1
THOC7	17q-Amp	0.671	1
THOC7	1p-Del	0.671	1
THOC7	Del_6p25.3	0.671	1
UBQLN2	NAA25	0.671	1
UBQLN2	17q-Amp	0.671	1
UBQLN2	1p-Del	0.671	1
UBQLN2	Del_6p25.3	0.671	1
RB1	Amp_6p21.1	0.671	1
KIAA1586	17q-Amp	0.671	1
KIAA1586	1p-Del	0.671	1
KIAA1586	Del_6p25.3	0.671	1
LINGO4	RLIM	0.671	1
LINGO4	1p-Del	0.671	1
LINGO4	Del_6p25.3	0.671	1
ATP6V1B1	PCBP1	0.671	1
ATP6V1B1	Del_12p13.2	0.671	1
NAA25	IQCD	0.671	1
NAA25	PLEKHF2	0.671	1
NAA25	PCBP1	0.671	1
NAA25	Del_12p13.2	0.671	1
IQCD	RLIM	0.671	1
IQCD	1p-Del	0.671	1
IQCD	Del_6p25.3	0.671	1
PLEKHF2	17q-Amp	0.671	1
PLEKHF2	1p-Del	0.671	1
PLEKHF2	Del_6p25.3	0.671	1
RLIM	PCBP1	0.671	1
RLIM	Del_12p13.2	0.671	1
PCBP1	17q-Amp	0.671	1
PCBP1	1p-Del	0.671	1
Del_6p25.3	Del_12p13.2	0.671	1
CDH1	Amp_12p13.33	0.672	1
CDH1	Del_5q22.2	0.672	1
PIK3R1	MAP4K3	0.672	1
PIK3R1	Del_3p26.1	0.672	1
PIK3R1	Del_10q21.1	0.672	1
TP53	ATM	0.673	1
ACVR1B	Del_1p36.11	0.673	1
MLH1	Del_10q23.31	0.673	1
FBXW7	Del_16p13.3	0.673	1
PLAGL2	Del_10q25.2	0.673	1
ALPK2	4q-Del	0.673	1
C14orf184	SLK	0.673	1
C14orf184	12q-Amp	0.673	1
C14orf184	Del_10q25.2	0.673	1
C14orf184	Del_16q23.1	0.673	1
Amp_12p13.33	Del_18q12.2	0.673	1
CDH1	KIAA1586	0.674	1
CDH1	PCBP1	0.674	1
CDH1	Del_1p33	0.674	1
CDH1	Del_12p13.2	0.674	1
NTAN1	Amp_12p13.33	0.674	1
P2RY13	Amp_11p15.5	0.674	1
NR1H3	Del_1p33	0.674	1
TPRKB	Amp_12p13.33	0.674	1
TPRKB	Del_15q22.33	0.674	1
ALPK2	THOC7	0.674	1
ALPK2	PCBP1	0.674	1
DDX26B	Amp_11p15.5	0.674	1
DDX26B	Del_1p33	0.674	1
THOC7	Del_5q22.2	0.674	1
LINGO4	Del_15q22.33	0.674	1
C14orf184	20p-Amp	0.674	1
ATP6V1B1	Del_5q12.1	0.674	1
NAA25	Del_5q12.1	0.674	1
IQCD	Del_15q22.33	0.674	1
PLEKHF2	Amp_12p13.33	0.674	1
PLEKHF2	Del_5q22.2	0.674	1
PLEKHF2	Del_15q22.33	0.674	1
RLIM	Del_5q12.1	0.674	1
CYSLTR2	Amp_11p15.5	0.674	1
CYSLTR2	Del_1p33	0.674	1
PCBP1	Amp_12p13.33	0.674	1
PCBP1	Del_5q22.2	0.674	1
PCBP1	Del_15q22.33	0.674	1
17q-Amp	Del_5q12.1	0.674	1
Amp_16q12.1	Del_1p33	0.674	1
Del_5q12.1	Del_6p25.3	0.674	1
Del_12p13.2	Del_15q22.33	0.674	1
TP53	FBXW7	0.675	1
NF1	Del_16q23.1	0.675	1
THOC7	18q-Del	0.675	1
PLEKHF2	Amp_20p11.21	0.675	1
ATM	Amp_12p13.33	0.675	1
APC	FAM123B	0.676	1
ZBTB20	Amp_5p13.2	0.676	1
PRPS1	8q-Amp	0.676	1
1q-Amp	Amp_5p13.2	0.676	1
20p-Amp	Del_1p33	0.676	1
8q-Amp	Amp_17p11.2	0.676	1
STARD3NL	Del_3p14.2	0.678	1
ATXN3L	ATG5	0.678	1
ATXN3L	Amp_17p11.2	0.678	1
RBMX	GGT1	0.678	1
RBMX	Amp_17p11.2	0.678	1
RPTN	Del_3p14.2	0.678	1
RBM44	21q-Del	0.678	1
RBM44	4p-Del	0.678	1
GMPS	GGT1	0.678	1
GMPS	Amp_17p11.2	0.678	1
L1TD1	GGT1	0.678	1
L1TD1	Amp_17p11.2	0.678	1
DCLK2	21q-Del	0.678	1
C2orf29	GGT1	0.678	1
C2orf29	Amp_17p11.2	0.678	1
FKBP9	GGT1	0.678	1
FKBP9	Amp_17p11.2	0.678	1
GGT1	MAP4K3	0.678	1
GGT1	KCTD3	0.678	1
GGT1	PLXNA3	0.678	1
GGT1	Del_10q21.1	0.678	1
ATG5	KCTD3	0.678	1
ATG5	Del_3p26.1	0.678	1
ATG5	Del_10q21.1	0.678	1
ATG5	Del_16p13.3	0.678	1
MAP4K3	PRPS1	0.678	1
MAP4K3	Amp_17p11.2	0.678	1
PRPS1	KCTD3	0.678	1
PRPS1	IDH2	0.678	1
PRPS1	Del_3p26.1	0.678	1
PRPS1	Del_10q21.1	0.678	1
KCTD3	Amp_17p11.2	0.678	1
IDH2	Amp_17p11.2	0.678	1
PLXNA3	Amp_17p11.2	0.678	1
SMAD4	Del_10q23.31	0.678	1
15q-Del	Amp_20p11.23	0.678	1
Amp_17p11.2	Del_10q21.1	0.678	1
Amp_17p11.2	Del_16p13.3	0.678	1
APC	16p-Amp	0.679	1
ACVR1B	SELPLG	0.679	1
ACVR1B	SMAD2	0.679	1
SELPLG	Del_10q23.31	0.679	1
CTNNB1	Del_10q25.2	0.679	1
Amp_19q13.11	Del_10q23.31	0.679	1
Del_9p21.3	Del_10q23.31	0.679	1
B2M	GRB2	0.68	1
WNT1	Del_15q11.2	0.68	1
NF1	7p-Amp	0.68	1
P2RY13	GRB2	0.68	1
NR1H3	GRB2	0.68	1
EGR1	CYSLTR2	0.68	1
EGR1	Amp_16q12.1	0.68	1
PTCH1	Amp_6p21.1	0.68	1
PTCH1	Del_3q26.31	0.68	1
CYSLTR2	GRB2	0.68	1
TMEM126A	Del_15q11.2	0.68	1
Amp_8p11.21	Del_4q35.1	0.68	1
Amp_17q12	Del_15q15.2	0.68	1
Del_1p36.11	Del_3p14.2	0.68	1
Del_7q31.1	Del_15q11.2	0.68	1
SOX9	HPS3	0.681	1
CRIPAK	ASXL1	0.681	1
CRIPAK	SLK	0.681	1
CRIPAK	12q-Amp	0.681	1
CRIPAK	Del_16q23.1	0.681	1
FMN2	Amp_16q12.1	0.681	1
ASXL1	IDH1	0.681	1
ASXL1	Del_17q24.3	0.681	1
SMAD2	7q-Amp	0.681	1
MPHOSPH10	Del_16q23.1	0.681	1
IDH1	SLK	0.681	1
IDH1	Del_10q25.2	0.681	1
IDH1	Del_16q23.1	0.681	1
ROS1	Amp_16q12.1	0.681	1
CTNNB1	21q-Del	0.681	1
CTNNB1	4p-Del	0.681	1
PTEN	Amp_16p11.2	0.681	1
ECT2	SLK	0.681	1
ECT2	15q-Del	0.681	1
ECT2	Del_16q23.1	0.681	1
THOC7	Amp_13q12.13	0.681	1
ALDH1A3	SLK	0.681	1
ALDH1A3	Del_16q23.1	0.681	1
PCBP1	Amp_13q12.13	0.681	1
SLK	Amp_16p11.2	0.681	1
12q-Amp	Del_17q24.3	0.681	1
15q-Del	Amp_16p11.2	0.681	1
Amp_8q24.21	Del_22q13.32	0.681	1
Amp_16p11.2	Del_10q25.2	0.681	1
Amp_17q24.1	Del_5q12.1	0.681	1
Del_16q23.1	Del_17q24.3	0.681	1
ARID1A	Del_12p13.2	0.682	1
ZFP36L2	20p-Amp	0.682	1
ATG5	Del_18p11.31	0.682	1
20p-Amp	Del_6p25.3	0.682	1
21q-Del	Del_8p23.2	0.682	1
Amp_5p13.2	Del_14q31.1	0.682	1
WNT1	1q-Amp	0.683	1
ATXN3L	13q-Amp	0.683	1
ALG12	ZBTB20	0.683	1
ZBTB20	TMEM126A	0.683	1
ZBTB20	Del_7q31.1	0.683	1
MAP4K3	8p-Del	0.683	1
PTGDR	1q-Amp	0.683	1
IDH2	8p-Del	0.683	1
1q-Amp	Del_7q31.1	0.683	1
SETD2	THOC7	0.684	1
SETD2	UBQLN2	0.684	1
SETD2	PLEKHF2	0.684	1
TOP2B	Del_21q11.2	0.684	1
KIAA1586	8p-Amp	0.684	1
PIK3R1	Del_22q13.32	0.684	1
IQCD	8p-Amp	0.684	1
8p-Amp	Del_12p13.2	0.684	1
TXNDC2	C14orf184	0.685	1
CTNNB1	NAA25	0.685	1
CTNNB1	Del_6p25.3	0.685	1
TOP2B	C14orf184	0.685	1
C14orf184	13q-Amp	0.685	1
C14orf184	Amp_5p13.2	0.685	1
NF1	1q-Amp	0.686	1
RBMX	Del_5q22.2	0.686	1
ALPK2	IDH2	0.686	1
ALPK2	Del_16p13.3	0.686	1
CTNNB1	8p-Amp	0.686	1
RB1	12q-Amp	0.686	1
RB1	Del_16q23.1	0.686	1
C2orf29	Del_5q22.2	0.686	1
C2orf29	Del_15q22.33	0.686	1
RLIM	14q-Del	0.686	1
MAP4K3	Del_5q22.2	0.686	1
KCTD3	Amp_12p13.33	0.686	1
PTGDR	20q-Amp	0.686	1
IDH2	Amp_12p13.33	0.686	1
IDH2	Del_15q22.33	0.686	1
Del_3p26.1	Del_5q22.2	0.686	1
Del_15q22.33	Del_16p13.3	0.686	1
BMPR2	Amp_6p21.1	0.687	1
BMPR2	Del_8q11.1	0.687	1
RHOA	16p-Amp	0.687	1
RHOA	5q-Del	0.687	1
ATXN3L	Amp_17q24.1	0.687	1
NLRC4	Del_10q21.1	0.687	1
NLRC4	Del_16p13.3	0.687	1
C2orf29	BCORL1	0.687	1
C2orf29	Amp_17q24.1	0.687	1
CHD3	Del_10q21.1	0.687	1
CHD3	Del_16p13.3	0.687	1
BCORL1	Del_10q21.1	0.687	1
BCORL1	Del_16p13.3	0.687	1
C15orf52	16p-Amp	0.687	1
C15orf52	5q-Del	0.687	1
16p-Amp	Amp_6p21.1	0.687	1
16p-Amp	Del_8q11.1	0.687	1
20q-Amp	Del_10q23.31	0.687	1
5q-Del	Del_6q26	0.687	1
5q-Del	Del_8q11.1	0.687	1
Amp_17q24.1	Del_10q21.1	0.687	1
MGA	16p-Amp	0.688	1
MGA	5q-Del	0.688	1
16p-Amp	Del_5q21.1	0.688	1
APC	Del_1p33	0.689	1
CDH1	7q-Amp	0.689	1
ZFP36L2	Del_1p13.1	0.689	1
RLIM	Del_1p13.1	0.689	1
Del_1p13.1	Del_6p25.3	0.689	1
BCOR	P2RY13	0.69	1
KDM6A	Amp_16q12.1	0.69	1
STARD3NL	TPRKB	0.69	1
STARD3NL	THOC7	0.69	1
STARD3NL	KIAA1586	0.69	1
STARD3NL	LINGO4	0.69	1
STARD3NL	Del_12p13.2	0.69	1
NF1	7q-Amp	0.69	1
DIP2B	NR1H3	0.69	1
RPTN	THOC7	0.69	1
RPTN	UBQLN2	0.69	1
RPTN	PCBP1	0.69	1
RPTN	Del_12p13.2	0.69	1
RBM44	PLEKHF2	0.69	1
RBM44	PCBP1	0.69	1
RBM44	Del_12p13.2	0.69	1
THOC7	DCLK2	0.69	1
UBQLN2	DCLK2	0.69	1
DCLK2	LINGO4	0.69	1
DCLK2	IQCD	0.69	1
DCLK2	PCBP1	0.69	1
DCLK2	Del_12p13.2	0.69	1
PIK3R1	22q-Del	0.69	1
PIK3R1	Del_4q22.1	0.69	1
16p-Amp	Amp_8q24.21	0.69	1
SOX9	PTEN	0.691	1
PTGDR	Amp_20q11.21	0.691	1
Amp_17q12	Del_3p14.2	0.691	1
APC	C2orf29	0.692	1
APC	Del_16p13.3	0.692	1
17p-Del	Amp_17q24.1	0.692	1
BCOR	NF2	0.693	1
ALPK2	21q-Del	0.693	1
ROS1	Del_1p33	0.693	1
21q-Del	Amp_13q12.13	0.693	1
Amp_12p13.33	Amp_17q12	0.693	1
Amp_17q12	Del_5q22.2	0.693	1
CDH1	ATP6V1B1	0.694	1
CDH1	17q-Amp	0.694	1
CDH1	Del_6p25.3	0.694	1
SELPLG	ATG5	0.694	1
SMAD2	GGT1	0.694	1
SMAD2	PRPS1	0.694	1
SMAD2	Amp_17p11.2	0.694	1
NR1H3	Del_22q13.32	0.694	1
SLC26A8	ATG5	0.694	1
GGT1	Del_9p21.3	0.694	1
GGT1	Del_19p13.3	0.694	1
ATG5	Amp_19q13.11	0.694	1
ATG5	Del_9p21.3	0.694	1
ATG5	Del_19p13.3	0.694	1
PRPS1	Amp_19q13.11	0.694	1
PRPS1	Del_19p13.3	0.694	1
SMAD4	Amp_20p11.21	0.694	1
Amp_5p13.2	Amp_17q12	0.694	1
Amp_17p11.2	Del_9p21.3	0.694	1
Amp_17p11.2	Del_19p13.3	0.694	1
TXNDC2	8p-Del	0.695	1
ACVR1B	DIP2B	0.695	1
CRIPAK	ATM	0.695	1
FBXW7	TMEM126A	0.695	1
ASXL1	THOC7	0.695	1
ASXL1	PCBP1	0.695	1
ASXL1	Del_12p13.2	0.695	1
TPRKB	15q-Del	0.695	1
IDH1	ATM	0.695	1
IQCD	15q-Del	0.695	1
PLEKHF2	15q-Del	0.695	1
PCBP1	15q-Del	0.695	1
15q-Del	Del_12p13.2	0.695	1
Amp_13q12.13	Del_5q22.2	0.695	1
Amp_20p11.21	Del_16p13.3	0.695	1
SELPLG	4q-Del	0.696	1
SMAD2	4q-Del	0.696	1
IDH1	Del_4q22.1	0.696	1
ECT2	22q-Del	0.696	1
C14orf184	SMAD4	0.696	1
4q-Del	Amp_19q13.11	0.696	1
TXNDC2	Amp_13q12.13	0.697	1
ZBTB20	CYLD	0.697	1
PLAGL2	CYLD	0.697	1
C11orf30	C14orf184	0.697	1
RB1	GGT1	0.697	1
C14orf184	BCL9	0.697	1
C14orf184	CYLD	0.697	1
BCL9	1q-Amp	0.697	1
CYLD	1q-Amp	0.697	1
RNF43	SMAD4	0.698	1
BCOR	CTNNB1	0.698	1
WNT1	Amp_16p11.2	0.698	1
WNT1	Del_17q24.3	0.698	1
CRIPAK	Del_7q31.1	0.698	1
MAPK6	TMEM126A	0.698	1
MAPK6	Del_7q31.1	0.698	1
OR4D10	EGR1	0.698	1
MVK	GRB2	0.698	1
ALG12	Amp_16p11.2	0.698	1
ALG12	Del_17q24.3	0.698	1
GPATCH8	GRB2	0.698	1
IDH1	PTGDR	0.698	1
IDH1	TMEM126A	0.698	1
IDH1	Del_7q31.1	0.698	1
EGR1	RLIM	0.698	1
EGR1	17q-Amp	0.698	1
EGR1	1p-Del	0.698	1
ECT2	PTGDR	0.698	1
ALDH1A3	TMEM126A	0.698	1
PTCH1	12q-Amp	0.698	1
C14orf43	TMEM126A	0.698	1
ATP6V1B1	GRB2	0.698	1
RLIM	13q-Amp	0.698	1
PTGDR	Amp_16p11.2	0.698	1
PTGDR	Del_17q24.3	0.698	1
GRB2	17q-Amp	0.698	1
GRB2	Del_6p25.3	0.698	1
Amp_16p11.2	Del_7q31.1	0.698	1
Del_7q31.1	Del_17q24.3	0.698	1
RNF43	TXNDC2	0.699	1
TXNDC2	20p-Amp	0.699	1
7p-Amp	Del_1p36.11	0.699	1
SOX9	16p-Amp	0.7	1
TXNDC2	IDH1	0.7	1
TXNDC2	ALDH1A3	0.7	1
TXNDC2	Amp_16p11.2	0.7	1
CRIPAK	TOP2B	0.7	1
MPHOSPH10	Amp_5p13.2	0.7	1
IDH1	Amp_5p13.2	0.7	1
ECT2	Amp_5p13.2	0.7	1
ALDH1A3	Amp_5p13.2	0.7	1
TOP2B	Amp_16p11.2	0.7	1
GMPS	8p-Amp	0.7	1
MAP4K3	8p-Amp	0.7	1
13q-Amp	Del_1p33	0.7	1
20q-Amp	Del_3q26.31	0.7	1
8p-Amp	Del_16p13.3	0.7	1
Amp_17q24.1	Del_1p13.1	0.7	1
L1TD1	SMAD4	0.701	1
MAP4K3	SMAD4	0.701	1
SMAD4	Del_10q21.1	0.701	1
SMAD4	Del_16p13.3	0.701	1
1q-Amp	Del_18q21.2	0.701	1
PTEN	7p-Amp	0.702	1
BCORL1	Del_15q22.33	0.702	1
Amp_12p13.33	Amp_17q24.1	0.702	1
ARID1A	12q-Amp	0.703	1
CDH1	8p-Amp	0.703	1
SELPLG	Amp_8p11.23	0.703	1
PRKDC	Amp_19q13.11	0.703	1
SMAD4	15q-Del	0.703	1
Amp_8p11.23	Del_19p13.3	0.703	1
ARID1A	OR4D10	0.704	1
ZFP36L2	Amp_11p15.5	0.704	1
ZFP36L2	Del_1p33	0.704	1
IDH1	Amp_20p11.23	0.704	1
CTNNB1	Del_4q35.1	0.704	1
RLIM	Amp_11p15.5	0.704	1
RLIM	Del_1p33	0.704	1
16p-Amp	Amp_8p11.23	0.704	1
1p-Del	Amp_11p15.5	0.704	1
Amp_11p15.5	Del_6p25.3	0.704	1
Amp_20p11.23	Del_17q24.3	0.704	1
FAM123B	BCOR	0.705	1
FAM123B	KDM6A	0.705	1
ATXN3L	12q-Amp	0.705	1
ATXN3L	Del_16q23.1	0.705	1
RBMX	Del_16q23.1	0.705	1
GMPS	12q-Amp	0.705	1
L1TD1	Del_16q23.1	0.705	1
C2orf29	SLK	0.705	1
C2orf29	Del_10q25.2	0.705	1
FKBP9	Del_16q23.1	0.705	1
MAP4K3	Del_16q23.1	0.705	1
PLXNA3	12q-Amp	0.705	1
SLK	Del_16p13.3	0.705	1
8p-Amp	Del_18q22.1	0.705	1
22q-Del	Amp_20p11.21	0.705	1
Del_10q25.2	Del_16p13.3	0.705	1
RNF43	CYSLTR2	0.706	1
ACVR1B	P2RY13	0.706	1
NTAN1	Del_4q22.1	0.706	1
P2RY13	Del_10q23.31	0.706	1
RBMX	Del_15q11.2	0.706	1
SMAD2	Amp_8p11.21	0.706	1
NR1H3	Del_10q23.31	0.706	1
PLAGL2	7q-Amp	0.706	1
RPTN	Del_5q12.1	0.706	1
DDX26B	Del_10q23.31	0.706	1
THOC7	22q-Del	0.706	1
THOC7	Del_4q22.1	0.706	1
KIAA1586	Del_4q22.1	0.706	1
LINGO4	22q-Del	0.706	1
IQCD	Del_4q22.1	0.706	1
PLEKHF2	22q-Del	0.706	1
PLEKHF2	Del_4q22.1	0.706	1
CYSLTR2	Del_10q23.31	0.706	1
IDH2	Del_15q11.2	0.706	1
22q-Del	Del_12p13.2	0.706	1
APC	SLK	0.707	1
BCOR	8p-Del	0.707	1
MLH1	RBM44	0.707	1
STARD3NL	Del_1p36.11	0.707	1
ASXL1	4q-Del	0.707	1
Amp_12p13.33	Del_21q11.2	0.707	1
Del_5q22.2	Del_22q13.32	0.707	1
RHOA	Amp_20p11.23	0.708	1
NF1	Del_10q23.31	0.708	1
PTEN	Del_8p22	0.708	1
Amp_20p11.23	Del_3q26.31	0.708	1
FAM123B	ZFP36L2	0.709	1
FAM123B	RLIM	0.709	1
7q-Amp	14q-Del	0.709	1
15q-Del	Amp_8p11.21	0.709	1
ARID1A	21q-Del	0.71	1
ARID1A	Del_3p14.2	0.71	1
SOX9	1q-Amp	0.71	1
B2M	GGT1	0.71	1
B2M	PRPS1	0.71	1
B2M	Amp_17p11.2	0.71	1
P2RY13	GGT1	0.71	1
P2RY13	Amp_17p11.2	0.71	1
ATXN3L	Del_8p23.2	0.71	1
NR1H3	GGT1	0.71	1
NR1H3	ATG5	0.71	1
NR1H3	PRPS1	0.71	1
NR1H3	Amp_17p11.2	0.71	1
DDX26B	GGT1	0.71	1
DDX26B	Amp_17p11.2	0.71	1
GGT1	CYSLTR2	0.71	1
CYSLTR2	ATG5	0.71	1
CYSLTR2	Amp_17p11.2	0.71	1
Amp_20p11.21	Del_8q11.1	0.71	1
TP53	CYSLTR2	0.711	1
NTAN1	RHOA	0.711	1
NTAN1	Amp_6p21.1	0.711	1
NTAN1	Del_3q26.31	0.711	1
NTAN1	Del_6q26	0.711	1
NTAN1	Del_8q11.1	0.711	1
BMPR2	SMAD4	0.711	1
RHOA	TPRKB	0.711	1
RHOA	THOC7	0.711	1
RHOA	UBQLN2	0.711	1
RHOA	KIAA1586	0.711	1
RHOA	IQCD	0.711	1
RHOA	PLEKHF2	0.711	1
RHOA	Del_12p13.2	0.711	1
TPRKB	C15orf52	0.711	1
TPRKB	Del_6q26	0.711	1
TPRKB	Del_8q11.1	0.711	1
SETD2	Del_3p14.2	0.711	1
PTEN	16p-Amp	0.711	1
THOC7	C15orf52	0.711	1
THOC7	Amp_6p21.1	0.711	1
THOC7	Del_6q26	0.711	1
UBQLN2	Amp_6p21.1	0.711	1
UBQLN2	Del_6q26	0.711	1
UBQLN2	Del_8q11.1	0.711	1
KIAA1586	C15orf52	0.711	1
KIAA1586	Del_3q26.31	0.711	1
KIAA1586	Del_6q26	0.711	1
KIAA1586	Del_8q11.1	0.711	1
PTCH1	Amp_12p13.33	0.711	1
LINGO4	Amp_6p21.1	0.711	1
LINGO4	Del_3q26.31	0.711	1
LINGO4	Del_6q26	0.711	1
LINGO4	Del_8q11.1	0.711	1
IQCD	Amp_6p21.1	0.711	1
IQCD	Del_6q26	0.711	1
IQCD	Del_8q11.1	0.711	1
PLEKHF2	Amp_6p21.1	0.711	1
PLEKHF2	Del_3q26.31	0.711	1
PLEKHF2	Del_6q26	0.711	1
PLEKHF2	Del_8q11.1	0.711	1
C15orf52	PCBP1	0.711	1
C15orf52	Del_12p13.2	0.711	1
PCBP1	Del_3q26.31	0.711	1
PCBP1	Del_8q11.1	0.711	1
WNT1	ATXN3L	0.712	1
WNT1	GMPS	0.712	1
WNT1	L1TD1	0.712	1
WNT1	C2orf29	0.712	1
WNT1	Del_3p26.1	0.712	1
WNT1	Del_10q21.1	0.712	1
WNT1	Del_16p13.3	0.712	1
ATXN3L	Del_7q31.1	0.712	1
RBMX	PTGDR	0.712	1
RBMX	Del_7q31.1	0.712	1
ALG12	GMPS	0.712	1
ALG12	C2orf29	0.712	1
ALG12	MAP4K3	0.712	1
ALG12	KCTD3	0.712	1
ALG12	IDH2	0.712	1
ALG12	Del_3p26.1	0.712	1
ALG12	Del_10q21.1	0.712	1
ALG12	Del_16p13.3	0.712	1
RB1	CYSLTR2	0.712	1
GMPS	TMEM126A	0.712	1
L1TD1	TMEM126A	0.712	1
C2orf29	PTGDR	0.712	1
C2orf29	Del_7q31.1	0.712	1
FKBP9	TMEM126A	0.712	1
FKBP9	Del_7q31.1	0.712	1
MAP4K3	PTGDR	0.712	1
MAP4K3	Del_7q31.1	0.712	1
KCTD3	PTGDR	0.712	1
KCTD3	TMEM126A	0.712	1
KCTD3	Del_7q31.1	0.712	1
PTGDR	Del_3p26.1	0.712	1
IDH2	TMEM126A	0.712	1
TMEM126A	PLXNA3	0.712	1
TMEM126A	Del_16p13.3	0.712	1
PLXNA3	Del_7q31.1	0.712	1
13q-Amp	Del_5q22.2	0.712	1
Del_3p26.1	Del_7q31.1	0.712	1
Del_7q31.1	Del_10q21.1	0.712	1
Del_7q31.1	Del_16p13.3	0.712	1
SELPLG	Amp_17q24.1	0.713	1
FMN2	GGT1	0.713	1
FMN2	Amp_17p11.2	0.713	1
NF2	16p-Amp	0.713	1
ATXN3L	ASXL1	0.713	1
ATXN3L	15q-Del	0.713	1
RBMX	ASXL1	0.713	1
RBMX	15q-Del	0.713	1
ASXL1	GMPS	0.713	1
ASXL1	L1TD1	0.713	1
ASXL1	C2orf29	0.713	1
ASXL1	MAP4K3	0.713	1
SMAD2	NLRC4	0.713	1
SMAD2	BCORL1	0.713	1
ROS1	GGT1	0.713	1
ROS1	ATG5	0.713	1
ROS1	Amp_17p11.2	0.713	1
NLRC4	Amp_19q13.11	0.713	1
C2orf29	15q-Del	0.713	1
SLC26A8	Amp_17q24.1	0.713	1
BCORL1	Del_9p21.3	0.713	1
IDH2	15q-Del	0.713	1
C15orf52	Del_3p14.2	0.713	1
21q-Del	Amp_6p21.1	0.713	1
Amp_17q12	Del_6q26	0.713	1
Amp_17q12	Del_8q11.1	0.713	1
Amp_17q24.1	Del_19p13.3	0.713	1
FAM123B	15q-Del	0.714	1
NF2	SLC26A8	0.714	1
NF2	Del_19p13.3	0.714	1
PTEN	8q-Amp	0.714	1
PIK3R1	Del_16q23.1	0.714	1
14q-Del	Amp_17q12	0.714	1
Amp_8q24.21	Del_9p21.3	0.714	1
TP53	Amp_16p11.2	0.715	1
TXNDC2	Amp_13q22.1	0.716	1
GRB2	Amp_20p11.23	0.716	1
20p-Amp	Del_5q12.1	0.716	1
8q-Amp	Amp_16p11.2	0.716	1
SETD2	NLRC4	0.717	1
RPTN	GRB2	0.717	1
DCLK2	GRB2	0.717	1
HPS3	1q-Amp	0.717	1
Amp_13q12.13	Del_6q26	0.717	1
NR1H3	Del_4q35.1	0.718	1
1q-Amp	Del_18q22.1	0.718	1
Amp_16q12.1	Del_4q35.1	0.718	1
TXNDC2	13q-Amp	0.719	1
BCOR	OR4D10	0.719	1
BCOR	GPATCH8	0.719	1
BCOR	ATP6V1B1	0.719	1
BCOR	RLIM	0.719	1
BCOR	17q-Amp	0.719	1
ZFP36L2	DIP2B	0.719	1
WNT1	Del_15q21.1	0.719	1
CRIPAK	C11orf30	0.719	1
CRIPAK	BCL9	0.719	1
KDM6A	Del_6p25.3	0.719	1
DIP2B	GPATCH8	0.719	1
DIP2B	ATP6V1B1	0.719	1
DIP2B	17q-Amp	0.719	1
DIP2B	Del_6p25.3	0.719	1
MPHOSPH10	CYLD	0.719	1
EGR1	Amp_12p13.33	0.719	1
CTNNB1	8q-Amp	0.719	1
ECT2	CYLD	0.719	1
NLRC4	Amp_11p15.5	0.719	1
CYLD	Amp_16p11.2	0.719	1
TMEM126A	Del_15q21.1	0.719	1
GRB2	Del_15q22.33	0.719	1
21q-Del	8p-Del	0.719	1
Amp_13q22.1	Del_5q21.1	0.719	1
Amp_17q24.1	Del_1p33	0.719	1
Del_7q31.1	Del_15q21.1	0.719	1
SELPLG	ALPK2	0.72	1
FMN2	RLIM	0.72	1
FMN2	17q-Amp	0.72	1
STARD3NL	Del_1p13.1	0.72	1
NF1	Del_5q21.1	0.72	1
ATXN3L	Amp_13q22.1	0.72	1
SMAD2	Amp_12p13.33	0.72	1
C11orf30	21q-Del	0.72	1
ROS1	17q-Amp	0.72	1
DCLK2	Del_1p13.1	0.72	1
SLC26A8	Amp_12p13.33	0.72	1
ATM	8p-Amp	0.72	1
CYLD	21q-Del	0.72	1
CYLD	Del_3p14.2	0.72	1
7q-Amp	8p-Del	0.72	1
Amp_12p13.33	Del_19p13.3	0.72	1
Amp_20q12	Del_12p13.2	0.72	1
FAM123B	HPS3	0.721	1
TXNDC2	Del_15q11.2	0.721	1
P2RY13	PTCH1	0.721	1
PTCH1	Amp_16q12.1	0.721	1
HPS3	17p-Del	0.721	1
ATG5	Del_21q11.2	0.721	1
OR4D10	Del_8p23.2	0.722	1
ZBTB20	C14orf184	0.722	1
PLAGL2	1q-Amp	0.722	1
C14orf184	1q-Amp	0.722	1
5q-Del	8p-Del	0.722	1
Amp_17q24.1	Del_15q21.1	0.722	1
Amp_20p11.23	Del_15q22.33	0.722	1
P2RY13	4q-Del	0.723	1
TP53	BCORL1	0.724	1
TP53	Amp_17q24.1	0.724	1
TXNDC2	ATXN3L	0.724	1
TXNDC2	L1TD1	0.724	1
TXNDC2	C2orf29	0.724	1
TXNDC2	KCTD3	0.724	1
TXNDC2	Del_3p26.1	0.724	1
TXNDC2	Del_16p13.3	0.724	1
NF2	Amp_12p13.33	0.724	1
ATXN3L	Amp_5p13.2	0.724	1
RBMX	Amp_5p13.2	0.724	1
TOP2B	C2orf29	0.724	1
TOP2B	Del_10q21.1	0.724	1
ATG5	Amp_8q24.21	0.724	1
PRPS1	Del_8p22	0.724	1
IDH2	Amp_5p13.2	0.724	1
Amp_5p13.2	Del_10q21.1	0.724	1
SELPLG	8p-Del	0.725	1
MGA	Amp_16p11.2	0.725	1
8p-Del	Amp_19q13.11	0.725	1
ACVR1B	NF2	0.726	1
NR1H3	ATM	0.726	1
CYSLTR2	7q-Amp	0.726	1
CYSLTR2	Del_18p11.31	0.726	1
APC	RHOA	0.727	1
APC	Del_3q26.31	0.727	1
APC	Del_6q26	0.727	1
ZFP36L2	GGT1	0.727	1
ZFP36L2	Amp_17p11.2	0.727	1
WNT1	SELPLG	0.727	1
WNT1	SMAD2	0.727	1
WNT1	Amp_19q13.11	0.727	1
WNT1	Del_9p21.3	0.727	1
WNT1	Del_15q15.2	0.727	1
WNT1	Del_19p13.3	0.727	1
SELPLG	ALG12	0.727	1
SELPLG	TMEM126A	0.727	1
SELPLG	Del_7q31.1	0.727	1
NF1	16p-Amp	0.727	1
OR4D10	GGT1	0.727	1
OR4D10	ATG5	0.727	1
OR4D10	Amp_17p11.2	0.727	1
MVK	GGT1	0.727	1
MVK	Amp_17p11.2	0.727	1
SMAD2	ALG12	0.727	1
SMAD2	TMEM126A	0.727	1
SMAD2	Del_7q31.1	0.727	1
ALG12	Del_9p21.3	0.727	1
ALG12	Del_19p13.3	0.727	1
GPATCH8	GGT1	0.727	1
GPATCH8	Amp_17p11.2	0.727	1
ECT2	Del_15q21.1	0.727	1
C2orf29	Del_4q22.1	0.727	1
ATP6V1B1	GGT1	0.727	1
ATP6V1B1	ATG5	0.727	1
ATP6V1B1	Amp_17p11.2	0.727	1
NAA25	GGT1	0.727	1
NAA25	ATG5	0.727	1
NAA25	PRPS1	0.727	1
NAA25	Amp_17p11.2	0.727	1
SLC26A8	TMEM126A	0.727	1
RLIM	GGT1	0.727	1
RLIM	ATG5	0.727	1
RLIM	Amp_17p11.2	0.727	1
GGT1	Del_6p25.3	0.727	1
ATG5	1p-Del	0.727	1
ATG5	Del_6p25.3	0.727	1
PRPS1	17q-Amp	0.727	1
PRPS1	1p-Del	0.727	1
PTGDR	Amp_19q13.11	0.727	1
PTGDR	Del_1p36.11	0.727	1
PTGDR	Del_19p13.3	0.727	1
IDH2	22q-Del	0.727	1
IDH2	Del_4q22.1	0.727	1
TMEM126A	Amp_19q13.11	0.727	1
TMEM126A	Del_15q15.2	0.727	1
PLXNA3	Del_4q22.1	0.727	1
8p-Amp	18q-Del	0.727	1
1p-Del	Amp_17p11.2	0.727	1
Amp_17p11.2	Del_6p25.3	0.727	1
Del_1p36.11	Del_7q31.1	0.727	1
Del_7q31.1	Del_9p21.3	0.727	1
Del_7q31.1	Del_15q15.2	0.727	1
Del_7q31.1	Del_19p13.3	0.727	1
MGA	THOC7	0.728	1
MGA	PLEKHF2	0.728	1
MGA	Del_12p13.2	0.728	1
THOC7	Del_5q21.1	0.728	1
Amp_20q13.12	Del_10q23.31	0.728	1
Del_15q22.33	Del_16q23.1	0.729	1
SELPLG	12q-Amp	0.73	1
SELPLG	Del_10q25.2	0.73	1
SELPLG	Del_16q23.1	0.73	1
RHOA	Amp_13q22.1	0.73	1
SMAD2	Del_16q23.1	0.73	1
SLC26A8	Del_10q25.2	0.73	1
15q-Del	Del_3p14.2	0.73	1
Amp_19q13.11	Del_10q25.2	0.73	1
Del_9p21.3	Del_10q25.2	0.73	1
FBXW7	SLC26A8	0.731	1
PRPS1	Amp_8p11.21	0.731	1
APC	IDH1	0.732	1
APC	Amp_16p11.2	0.732	1
NTAN1	16p-Amp	0.732	1
NTAN1	5q-Del	0.732	1
ZFP36L2	Del_21q11.2	0.732	1
MVK	Del_21q11.2	0.732	1
TPRKB	16p-Amp	0.732	1
TPRKB	5q-Del	0.732	1
THOC7	5q-Del	0.732	1
UBQLN2	16p-Amp	0.732	1
UBQLN2	5q-Del	0.732	1
KIAA1586	16p-Amp	0.732	1
KIAA1586	5q-Del	0.732	1
PTCH1	Del_10q23.31	0.732	1
LINGO4	16p-Amp	0.732	1
LINGO4	5q-Del	0.732	1
IQCD	16p-Amp	0.732	1
PLEKHF2	16p-Amp	0.732	1
PLEKHF2	5q-Del	0.732	1
PCBP1	16p-Amp	0.732	1
PCBP1	5q-Del	0.732	1
17q-Amp	Del_21q11.2	0.732	1
5q-Del	Del_12p13.2	0.732	1
SELPLG	SETD2	0.733	1
ASXL1	NLRC4	0.733	1
SMAD2	SETD2	0.733	1
C14orf184	8p-Del	0.733	1
C14orf184	Amp_20p11.23	0.733	1
SLC26A8	8p-Amp	0.733	1
BCORL1	15q-Del	0.733	1
Amp_17q12	Del_5q12.1	0.733	1
FAM123B	Del_10q23.31	0.734	1
ACVR1B	GPATCH8	0.734	1
ACVR1B	Del_6p25.3	0.734	1
RPTN	Amp_11p15.5	0.734	1
DCLK2	Amp_11p15.5	0.734	1
DCLK2	Del_1p33	0.734	1
ATP6V1B1	Del_10q23.31	0.734	1
NAA25	Del_10q23.31	0.734	1
Del_6p25.3	Del_10q23.31	0.734	1
BCOR	Del_15q11.2	0.735	1
CRIPAK	C14orf184	0.735	1
MAPK6	C14orf184	0.735	1
MPHOSPH10	C14orf184	0.735	1
PLAGL2	Amp_16p11.2	0.735	1
PLAGL2	Del_17q24.3	0.735	1
ECT2	C14orf184	0.735	1
C14orf43	C14orf184	0.735	1
C14orf184	Amp_16p11.2	0.735	1
C14orf184	Del_17q24.3	0.735	1
Amp_8q24.21	Del_15q21.1	0.735	1
Amp_17q24.1	Del_15q15.2	0.735	1
BCOR	Del_22q13.32	0.736	1
RHOA	GRB2	0.736	1
NF1	Amp_16p11.2	0.736	1
DIP2B	Del_22q13.32	0.736	1
IDH1	7p-Amp	0.736	1
EGR1	Amp_6p21.1	0.736	1
EGR1	Del_3q26.31	0.736	1
EGR1	Del_6q26	0.736	1
EGR1	Del_8q11.1	0.736	1
CYLD	Del_8p22	0.736	1
GRB2	Del_6q26	0.736	1
GRB2	Del_8q11.1	0.736	1
Del_5q12.1	Del_15q15.2	0.736	1
7p-Amp	Del_1p13.1	0.737	1
MLH1	CRIPAK	0.738	1
MLH1	IDH1	0.738	1
MLH1	Amp_16p11.2	0.738	1
KDM6A	BCORL1	0.738	1
DIP2B	NLRC4	0.738	1
DIP2B	Amp_17q24.1	0.738	1
TOP2B	SMAD4	0.738	1
8q-Amp	4p-Del	0.738	1
SOX9	CRIPAK	0.739	1
SOX9	TPRKB	0.739	1
SOX9	THOC7	0.739	1
SOX9	KIAA1586	0.739	1
SOX9	LINGO4	0.739	1
SOX9	PLEKHF2	0.739	1
SOX9	Del_12p13.2	0.739	1
B2M	Amp_17q24.1	0.739	1
P2RY13	Amp_17q24.1	0.739	1
ASXL1	GRB2	0.739	1
IDH1	HPS3	0.739	1
GGT1	Del_4q35.1	0.739	1
CYSLTR2	BCORL1	0.739	1
CYSLTR2	Amp_17q24.1	0.739	1
GRB2	15q-Del	0.739	1
Amp_6p21.1	Del_5q12.1	0.739	1
Amp_16q12.1	Amp_17q24.1	0.739	1
Del_5q12.1	Del_8q11.1	0.739	1
RHOA	Del_15q21.1	0.74	1
LINGO4	7q-Amp	0.74	1
IQCD	7q-Amp	0.74	1
SMAD4	Del_5q22.2	0.74	1
7q-Amp	Del_12p13.2	0.74	1
Del_3q26.31	Del_15q21.1	0.74	1
APC	CHD3	0.741	1
APC	BCORL1	0.741	1
ZFP36L2	8q-Amp	0.741	1
KDM6A	Amp_8p11.21	0.741	1
MVK	8q-Amp	0.741	1
PTEN	Amp_16q12.1	0.741	1
8p-Del	Del_5q22.2	0.741	1
B2M	WNT1	0.742	1
B2M	ALG12	0.742	1
B2M	TMEM126A	0.742	1
B2M	Del_7q31.1	0.742	1
WNT1	CYSLTR2	0.742	1
WNT1	Amp_16q12.1	0.742	1
P2RY13	PTGDR	0.742	1
ATXN3L	CYLD	0.742	1
RBMX	BCL9	0.742	1
RBMX	CYLD	0.742	1
ALG12	Amp_16q12.1	0.742	1
NR1H3	PTGDR	0.742	1
NR1H3	TMEM126A	0.742	1
NR1H3	Del_7q31.1	0.742	1
C11orf30	C2orf29	0.742	1
DDX26B	PTGDR	0.742	1
DDX26B	TMEM126A	0.742	1
DDX26B	Del_7q31.1	0.742	1
C2orf29	BCL9	0.742	1
PTCH1	16p-Amp	0.742	1
PTCH1	5q-Del	0.742	1
PIK3R1	Amp_16q12.1	0.742	1
CYLD	PLXNA3	0.742	1
CYLD	Del_10q21.1	0.742	1
CYLD	Del_16p13.3	0.742	1
TMEM126A	18q-Del	0.742	1
TMEM126A	Amp_20p11.21	0.742	1
SLK	Amp_11p15.5	0.742	1
12q-Amp	Amp_11p15.5	0.742	1
Amp_16q12.1	Del_7q31.1	0.742	1
ARID1A	GRB2	0.743	1
RNF43	Del_6p25.3	0.743	1
MLH1	Amp_12p13.33	0.743	1
MLH1	Del_15q22.33	0.743	1
PIK3R1	Amp_5p13.2	0.743	1
SMAD4	7p-Amp	0.743	1
STARD3NL	GGT1	0.744	1
STARD3NL	Amp_17p11.2	0.744	1
SETD2	12q-Amp	0.744	1
SETD2	Del_10q25.2	0.744	1
SETD2	Del_16q23.1	0.744	1
RPTN	GGT1	0.744	1
RPTN	ATG5	0.744	1
RPTN	Amp_17p11.2	0.744	1
RBM44	GGT1	0.744	1
RBM44	ATG5	0.744	1
RBM44	Amp_17p11.2	0.744	1
DCLK2	ATG5	0.744	1
DCLK2	Amp_17p11.2	0.744	1
CYLD	8q-Amp	0.744	1
CYLD	Del_4q35.1	0.744	1
SMAD4	22q-Del	0.744	1
Amp_20q11.21	Del_12p13.2	0.744	1
CDH1	RBM44	0.745	1
FBXW7	Amp_8p11.21	0.745	1
ASXL1	SMAD2	0.745	1
ASXL1	Amp_19q13.11	0.745	1
RB1	Amp_16p11.2	0.745	1
HPS3	4p-Del	0.745	1
HPS3	Del_3p14.2	0.745	1
PRKDC	NR1H3	0.746	1
P2RY13	Amp_8p11.23	0.746	1
Del_9p21.3	Del_15q11.2	0.746	1
TXNDC2	Amp_19q13.11	0.747	1
SELPLG	Amp_5p13.2	0.747	1
CTNNB1	IDH2	0.747	1
CTNNB1	Del_10q21.1	0.747	1
TOP2B	Del_9p21.3	0.747	1
TOP2B	Del_19p13.3	0.747	1
ATG5	13q-Amp	0.747	1
13q-Amp	Amp_19q13.11	0.747	1
16p-Amp	21q-Del	0.747	1
21q-Del	5q-Del	0.747	1
5q-Del	Del_3p14.2	0.747	1
Amp_13q12.13	Del_7q31.1	0.747	1
BCOR	RPTN	0.748	1
BCOR	DCLK2	0.748	1
KDM6A	STARD3NL	0.748	1
KDM6A	DCLK2	0.748	1
ATXN3L	C14orf184	0.748	1
DIP2B	RPTN	0.748	1
RBMX	PLAGL2	0.748	1
RBMX	C14orf184	0.748	1
ZBTB20	Amp_8p11.21	0.748	1
PLAGL2	GMPS	0.748	1
PLAGL2	L1TD1	0.748	1
PLAGL2	C2orf29	0.748	1
PLAGL2	FKBP9	0.748	1
PLAGL2	MAP4K3	0.748	1
PLAGL2	IDH2	0.748	1
PLAGL2	Del_3p26.1	0.748	1
PLAGL2	Del_10q21.1	0.748	1
PLAGL2	Del_16p13.3	0.748	1
SETD2	Del_15q21.1	0.748	1
L1TD1	C14orf184	0.748	1
PIK3R1	Amp_20p11.21	0.748	1
C14orf184	FKBP9	0.748	1
C14orf184	MAP4K3	0.748	1
C14orf184	KCTD3	0.748	1
C14orf184	PLXNA3	0.748	1
C14orf184	Del_3p26.1	0.748	1
C14orf184	Del_10q21.1	0.748	1
C14orf184	Del_16p13.3	0.748	1
ZFP36L2	4q-Del	0.749	1
ZBTB20	SMAD4	0.749	1
GPATCH8	4q-Del	0.749	1
RLIM	4q-Del	0.749	1
BCORL1	Del_4q22.1	0.749	1
Del_1p36.11	Del_3q26.31	0.75	1
Del_3q26.31	Del_15q15.2	0.75	1
ASXL1	22q-Del	0.751	1
ASXL1	Del_4q22.1	0.751	1
RNF43	KDM6A	0.752	1
THOC7	Del_17p12	0.752	1
20p-Amp	21q-Del	0.752	1
Amp_6p21.1	Del_1p13.1	0.752	1
FAM123B	1q-Amp	0.753	1
NTAN1	TPRKB	0.753	1
NTAN1	THOC7	0.753	1
NTAN1	KIAA1586	0.753	1
NTAN1	IQCD	0.753	1
NTAN1	PCBP1	0.753	1
NTAN1	Del_12p13.2	0.753	1
TPRKB	LINGO4	0.753	1
TPRKB	PLEKHF2	0.753	1
TPRKB	PCBP1	0.753	1
TPRKB	Del_12p13.2	0.753	1
THOC7	KIAA1586	0.753	1
THOC7	LINGO4	0.753	1
THOC7	PLEKHF2	0.753	1
THOC7	PCBP1	0.753	1
THOC7	Del_12p13.2	0.753	1
UBQLN2	PLEKHF2	0.753	1
UBQLN2	PCBP1	0.753	1
UBQLN2	Del_12p13.2	0.753	1
KIAA1586	LINGO4	0.753	1
KIAA1586	IQCD	0.753	1
LINGO4	PLEKHF2	0.753	1
LINGO4	PCBP1	0.753	1
LINGO4	Del_12p13.2	0.753	1
IQCD	PLEKHF2	0.753	1
IQCD	PCBP1	0.753	1
IQCD	Del_12p13.2	0.753	1
PLEKHF2	PCBP1	0.753	1
PLEKHF2	Del_12p13.2	0.753	1
PCBP1	Del_12p13.2	0.753	1
ZFP36L2	Del_4q35.1	0.754	1
MGA	RBMX	0.754	1
MGA	Del_16p13.3	0.754	1
P2RY13	Amp_12p13.33	0.754	1
RBMX	Del_5q21.1	0.754	1
17q-Amp	Del_4q35.1	0.754	1
21q-Del	Amp_20p11.23	0.754	1
Amp_16q12.1	Del_15q22.33	0.754	1
B2M	Del_10q25.2	0.755	1
P2RY13	12q-Amp	0.755	1
P2RY13	Del_10q25.2	0.755	1
NR1H3	SLK	0.755	1
NR1H3	Del_10q25.2	0.755	1
EGR1	16p-Amp	0.755	1
EGR1	5q-Del	0.755	1
PTEN	Del_10q21.1	0.755	1
DDX26B	Del_10q25.2	0.755	1
CYSLTR2	SLK	0.755	1
CYSLTR2	12q-Amp	0.755	1
CYSLTR2	Del_10q25.2	0.755	1
CYSLTR2	Del_16q23.1	0.755	1
PTGDR	8q-Amp	0.755	1
GRB2	16p-Amp	0.755	1
GRB2	5q-Del	0.755	1
Amp_16q12.1	Del_10q25.2	0.755	1
CDH1	RBMX	0.756	1
CDH1	L1TD1	0.756	1
CDH1	IDH2	0.756	1
NF2	NR1H3	0.756	1
NF2	CYSLTR2	0.756	1
PRKDC	IQCD	0.756	1
PRKDC	PLEKHF2	0.756	1
PRKDC	PCBP1	0.756	1
UBQLN2	Amp_8p11.23	0.756	1
LINGO4	Amp_8p11.23	0.756	1
IQCD	Amp_8p11.23	0.756	1
PLEKHF2	Amp_8p11.23	0.756	1
CYSLTR2	Amp_8p11.21	0.756	1
ARID1A	Amp_8p11.23	0.757	1
TXNDC2	Amp_12p13.33	0.757	1
TXNDC2	Del_15q22.33	0.757	1
ACVR1B	BCORL1	0.757	1
ACVR1B	Amp_17q24.1	0.757	1
ZFP36L2	PTGDR	0.757	1
ZFP36L2	7p-Amp	0.757	1
ZFP36L2	Del_7q31.1	0.757	1
WNT1	OR4D10	0.757	1
WNT1	NAA25	0.757	1
WNT1	17q-Amp	0.757	1
WNT1	1p-Del	0.757	1
WNT1	Del_6p25.3	0.757	1
OR4D10	ALG12	0.757	1
OR4D10	TMEM126A	0.757	1
OR4D10	Del_7q31.1	0.757	1
MVK	PTGDR	0.757	1
MVK	TMEM126A	0.757	1
MVK	Del_7q31.1	0.757	1
ALG12	NAA25	0.757	1
ALG12	RLIM	0.757	1
ALG12	17q-Amp	0.757	1
ALG12	1p-Del	0.757	1
ALG12	Del_6p25.3	0.757	1
GPATCH8	PTGDR	0.757	1
GPATCH8	TMEM126A	0.757	1
GPATCH8	Del_7q31.1	0.757	1
TOP2B	Amp_12p13.33	0.757	1
NLRC4	Del_10q23.31	0.757	1
PIK3R1	GGT1	0.757	1
PIK3R1	ATG5	0.757	1
ATP6V1B1	PTGDR	0.757	1
ATP6V1B1	TMEM126A	0.757	1
NAA25	PTGDR	0.757	1
NAA25	TMEM126A	0.757	1
RLIM	TMEM126A	0.757	1
RLIM	Del_7q31.1	0.757	1
PTGDR	17q-Amp	0.757	1
PTGDR	Del_6p25.3	0.757	1
TMEM126A	17q-Amp	0.757	1
TMEM126A	1p-Del	0.757	1
1p-Del	Del_7q31.1	0.757	1
Amp_17q24.1	Del_10q23.31	0.757	1
Del_6p25.3	Del_7q31.1	0.757	1
FAM123B	PTGDR	0.758	1
FAM123B	Del_7q31.1	0.758	1
SELPLG	22q-Del	0.758	1
CRIPAK	ZBTB20	0.758	1
NF2	4q-Del	0.758	1
SMAD2	Del_4q22.1	0.758	1
ZBTB20	IDH1	0.758	1
ECT2	1q-Amp	0.758	1
THOC7	Del_18q21.2	0.758	1
ATG5	SMAD4	0.758	1
PTGDR	Amp_13q22.1	0.758	1
SMAD4	Amp_17p11.2	0.758	1
1q-Amp	Amp_16p11.2	0.758	1
1q-Amp	Del_17q24.3	0.758	1
22q-Del	Del_9p21.3	0.758	1
Amp_19q13.11	Del_4q22.1	0.758	1
FMN2	DCLK2	0.759	1
15q-Del	Del_16q23.1	0.759	1
RNF43	HPS3	0.76	1
BMPR2	THOC7	0.76	1
KDM6A	Del_10q25.2	0.76	1
ATXN3L	HPS3	0.76	1
DIP2B	Del_10q25.2	0.76	1
CTNNB1	7p-Amp	0.76	1
C2orf29	HPS3	0.76	1
ATM	Del_16p13.3	0.76	1
HPS3	IDH2	0.76	1
HPS3	PLXNA3	0.76	1
HPS3	Del_10q21.1	0.76	1
HPS3	Del_16p13.3	0.76	1
Del_16p13.3	Del_18p11.31	0.76	1
SELPLG	PLAGL2	0.761	1
ATXN3L	Amp_20p11.23	0.761	1
SMAD2	PLAGL2	0.761	1
PLAGL2	Amp_19q13.11	0.761	1
PLAGL2	Del_9p21.3	0.761	1
PLAGL2	Del_19p13.3	0.761	1
C14orf184	SLC26A8	0.761	1
C14orf184	Amp_19q13.11	0.761	1
C14orf184	Del_9p21.3	0.761	1
C14orf184	Del_19p13.3	0.761	1
Amp_20p11.23	Del_16p13.3	0.761	1
ARID1A	FBXW7	0.762	1
ACVR1B	DCLK2	0.762	1
RHOA	GGT1	0.762	1
RHOA	ATG5	0.762	1
RHOA	Amp_17p11.2	0.762	1
ATXN3L	Del_15q21.1	0.762	1
RBMX	Del_15q21.1	0.762	1
RPTN	Del_10q23.31	0.762	1
GGT1	C15orf52	0.762	1
GGT1	Amp_6p21.1	0.762	1
GGT1	Del_3q26.31	0.762	1
GGT1	Del_6q26	0.762	1
GGT1	Del_8q11.1	0.762	1
ATG5	C15orf52	0.762	1
ATG5	Amp_6p21.1	0.762	1
ATG5	Del_3q26.31	0.762	1
ATG5	Del_6q26	0.762	1
ATG5	Del_8q11.1	0.762	1
PRPS1	C15orf52	0.762	1
PRPS1	Amp_6p21.1	0.762	1
PRPS1	Del_3q26.31	0.762	1
PRPS1	Del_6q26	0.762	1
PRPS1	Del_8q11.1	0.762	1
IDH2	Del_15q21.1	0.762	1
C15orf52	Amp_17p11.2	0.762	1
SMAD4	Amp_19q13.11	0.762	1
Amp_6p21.1	Amp_17p11.2	0.762	1
Amp_17p11.2	Del_3q26.31	0.762	1
Amp_17p11.2	Del_6q26	0.762	1
Amp_17p11.2	Del_8q11.1	0.762	1
20p-Amp	Del_1p13.1	0.763	1
SELPLG	C11orf30	0.764	1
SELPLG	CYLD	0.764	1
SELPLG	Amp_20p11.21	0.764	1
RHOA	Amp_11p15.5	0.764	1
NF2	TPRKB	0.764	1
SMAD2	CYLD	0.764	1
C11orf30	Del_19p13.3	0.764	1
THOC7	Del_14q31.1	0.764	1
NLRC4	17q-Amp	0.764	1
BCL9	Amp_19q13.11	0.764	1
NAA25	BCORL1	0.764	1
CHD3	Del_6p25.3	0.764	1
CYLD	7p-Amp	0.764	1
CYLD	Del_9p21.3	0.764	1
PRPS1	Del_8p23.2	0.764	1
C15orf52	Amp_11p15.5	0.764	1
C15orf52	Del_1p33	0.764	1
Amp_11p15.5	Del_3q26.31	0.764	1
Amp_11p15.5	Del_6q26	0.764	1
Amp_20q12	Del_10q25.2	0.764	1
Del_8q11.1	Del_18p11.31	0.764	1
MLH1	SLK	0.765	1
MLH1	12q-Amp	0.765	1
P2RY13	8p-Amp	0.765	1
NR1H3	8p-Amp	0.765	1
ALPK2	GGT1	0.765	1
RB1	17q-Amp	0.765	1
RB1	Del_6p25.3	0.765	1
ATG5	Amp_12p13.33	0.765	1
ATG5	Del_5q22.2	0.765	1
ATG5	Del_15q22.33	0.765	1
PRPS1	Del_15q22.33	0.765	1
IDH2	8q-Amp	0.765	1
PLXNA3	8q-Amp	0.765	1
20p-Amp	15q-Del	0.765	1
8p-Amp	Amp_13q22.1	0.765	1
8p-Del	Amp_16q12.1	0.765	1
Amp_12p13.33	Amp_17p11.2	0.765	1
Del_1p36.11	Del_10q25.2	0.765	1
Del_15q15.2	Del_16q23.1	0.765	1
FMN2	TMEM126A	0.766	1
NF1	TMEM126A	0.766	1
NF1	Del_7q31.1	0.766	1
ALG12	ROS1	0.766	1
8p-Amp	Del_1p36.11	0.766	1
SOX9	ATXN3L	0.767	1
SOX9	GMPS	0.767	1
SOX9	FKBP9	0.767	1
SOX9	IDH2	0.767	1
DIP2B	Del_4q35.1	0.767	1
EGR1	Del_5q21.1	0.768	1
BCORL1	8q-Amp	0.768	1
SMAD4	Del_22q13.32	0.768	1
APC	RBM44	0.769	1
ZFP36L2	7q-Amp	0.769	1
RLIM	7q-Amp	0.769	1
7q-Amp	1p-Del	0.769	1
Amp_12p13.33	Del_8p22	0.769	1
TP53	Amp_5p13.2	0.77	1
MLH1	Del_8p22	0.77	1
THOC7	Del_18q22.1	0.77	1
IQCD	Amp_8q24.21	0.77	1
PLEKHF2	Del_8p22	0.77	1
Amp_8q24.21	Del_15q15.2	0.77	1
Amp_20q11.21	Del_3p14.2	0.77	1
TXNDC2	SETD2	0.771	1
TXNDC2	CYSLTR2	0.771	1
P2RY13	TOP2B	0.771	1
ASXL1	Del_15q21.1	0.771	1
TOP2B	Amp_16q12.1	0.771	1
CYSLTR2	Amp_5p13.2	0.771	1
16p-Amp	Amp_8p11.21	0.771	1
Amp_8p11.21	Del_15q22.33	0.771	1
WNT1	STARD3NL	0.772	1
WNT1	RPTN	0.772	1
WNT1	RBM44	0.772	1
WNT1	DCLK2	0.772	1
STARD3NL	ALG12	0.772	1
ALG12	DCLK2	0.772	1
TPRKB	8p-Del	0.772	1
RPTN	PTGDR	0.772	1
RPTN	TMEM126A	0.772	1
RPTN	Del_7q31.1	0.772	1
RBM44	TMEM126A	0.772	1
DCLK2	PTGDR	0.772	1
DCLK2	TMEM126A	0.772	1
TMEM126A	18p-Del	0.772	1
20p-Amp	Del_17q24.3	0.772	1
18p-Del	Del_7q31.1	0.772	1
APC	MLH1	0.773	1
MLH1	GMPS	0.773	1
MLH1	KCTD3	0.773	1
MLH1	Del_10q21.1	0.773	1
WNT1	Del_21q11.2	0.773	1
ATXN3L	Del_15q15.2	0.773	1
RBMX	Del_15q15.2	0.773	1
PTCH1	17q-Amp	0.773	1
IDH2	Del_15q15.2	0.773	1
TMEM126A	Del_21q11.2	0.773	1
Del_3q26.31	Del_18q22.1	0.773	1
Del_7q31.1	Del_22q13.32	0.773	1
SOX9	ALPK2	0.774	1
SOX9	Amp_12p13.33	0.774	1
B2M	PLAGL2	0.774	1
B2M	C14orf184	0.774	1
P2RY13	C14orf184	0.774	1
NR1H3	PLAGL2	0.774	1
NR1H3	C14orf184	0.774	1
PLAGL2	CYSLTR2	0.774	1
PLAGL2	Amp_16q12.1	0.774	1
DDX26B	C14orf184	0.774	1
PTCH1	8q-Amp	0.774	1
C14orf184	CYSLTR2	0.774	1
C14orf184	Amp_16q12.1	0.774	1
PRPS1	8p-Amp	0.774	1
SLK	Del_4q22.1	0.774	1
13q-Amp	21q-Del	0.774	1
8p-Amp	Amp_17p11.2	0.774	1
4p-Del	Amp_11p15.5	0.774	1
TP53	STARD3NL	0.775	1
NTAN1	8q-Amp	0.775	1
TPRKB	EGR1	0.775	1
EGR1	THOC7	0.775	1
EGR1	KIAA1586	0.775	1
EGR1	IQCD	0.775	1
EGR1	PCBP1	0.775	1
EGR1	Del_12p13.2	0.775	1
THOC7	8q-Amp	0.775	1
UBQLN2	GRB2	0.775	1
KIAA1586	GRB2	0.775	1
IQCD	GRB2	0.775	1
PLEKHF2	GRB2	0.775	1
PLEKHF2	8q-Amp	0.775	1
GRB2	PCBP1	0.775	1
GRB2	Del_12p13.2	0.775	1
8q-Amp	Del_1p36.11	0.775	1
8q-Amp	Del_12p13.2	0.775	1
MLH1	Del_8p23.2	0.776	1
ZFP36L2	PIK3R1	0.776	1
RBM44	4q-Del	0.776	1
DCLK2	4q-Del	0.776	1
PIK3R1	17q-Amp	0.776	1
BCORL1	4q-Del	0.776	1
ACVR1B	Del_16q23.1	0.777	1
BCOR	C15orf52	0.777	1
BCOR	Del_6q26	0.777	1
BCOR	Del_8q11.1	0.777	1
CRIPAK	MAPK6	0.777	1
CRIPAK	Amp_16p11.2	0.777	1
KDM6A	C15orf52	0.777	1
MAPK6	IDH1	0.777	1
MAPK6	ECT2	0.777	1
MAPK6	Del_17q24.3	0.777	1
DIP2B	Amp_6p21.1	0.777	1
DIP2B	Del_6q26	0.777	1
MPHOSPH10	ECT2	0.777	1
MPHOSPH10	C14orf43	0.777	1
MPHOSPH10	Amp_16p11.2	0.777	1
1q-Amp	Del_22q13.32	0.777	1
15q-Del	Amp_16q12.1	0.777	1
Amp_16p11.2	Del_17q24.3	0.777	1
Del_10q23.31	Del_16q23.1	0.777	1
ATXN3L	ZBTB20	0.778	1
RBMX	1q-Amp	0.778	1
ALG12	PTCH1	0.778	1
ZBTB20	C2orf29	0.778	1
C2orf29	1q-Amp	0.778	1
PTCH1	Del_7q31.1	0.778	1
CHD3	SMAD4	0.778	1
ATM	Del_5q21.1	0.778	1
FKBP9	1q-Amp	0.778	1
KCTD3	1q-Amp	0.778	1
1q-Amp	Del_3p26.1	0.778	1
1q-Amp	Del_10q21.1	0.778	1
Amp_17q12	Del_21q11.2	0.778	1
Amp_17q12	Del_22q13.32	0.778	1
Del_3p14.2	Del_22q13.32	0.778	1
ZFP36L2	SLK	0.779	1
ZFP36L2	Del_16q23.1	0.779	1
OR4D10	Del_16q23.1	0.779	1
MVK	12q-Amp	0.779	1
MVK	Del_16q23.1	0.779	1
ZBTB20	Amp_8p11.23	0.779	1
GPATCH8	12q-Amp	0.779	1
GPATCH8	Del_16q23.1	0.779	1
PTEN	8p-Amp	0.779	1
ATP6V1B1	SLK	0.779	1
ATP6V1B1	12q-Amp	0.779	1
ATP6V1B1	Del_16q23.1	0.779	1
NAA25	Del_10q25.2	0.779	1
RLIM	12q-Amp	0.779	1
GGT1	5q-Del	0.779	1
ATG5	5q-Del	0.779	1
PRPS1	16p-Amp	0.779	1
SLK	Del_6p25.3	0.779	1
1p-Del	Del_10q25.2	0.779	1
5q-Del	Amp_17p11.2	0.779	1
Del_6p25.3	Del_10q25.2	0.779	1
Del_6p25.3	Del_16q23.1	0.779	1
TXNDC2	BCOR	0.78	1
TXNDC2	DIP2B	0.78	1
BCOR	Amp_5p13.2	0.78	1
FBXW7	Del_3q26.31	0.78	1
FBXW7	Del_8q11.1	0.78	1
CTNNB1	Del_1p13.1	0.78	1
DCLK2	SMAD4	0.78	1
RNF43	PTGDR	0.781	1
RNF43	TMEM126A	0.781	1
12q-Amp	Amp_13q12.13	0.781	1
18p-Del	Del_6p25.3	0.781	1
FAM123B	Del_5q21.1	0.782	1
NTAN1	21q-Del	0.782	1
NF1	Del_16p13.3	0.782	1
ATXN3L	7p-Amp	0.782	1
ASXL1	GGT1	0.782	1
ASXL1	PRPS1	0.782	1
THOC7	20p-Amp	0.782	1
UBQLN2	21q-Del	0.782	1
UBQLN2	Del_3p14.2	0.782	1
LINGO4	21q-Del	0.782	1
LINGO4	Amp_17q12	0.782	1
IQCD	4p-Del	0.782	1
PLEKHF2	4p-Del	0.782	1
PLEKHF2	Del_3p14.2	0.782	1
ATM	Del_7q31.1	0.782	1
ATG5	15q-Del	0.782	1
PRPS1	15q-Del	0.782	1
TMEM126A	Del_18p11.31	0.782	1
PCBP1	21q-Del	0.782	1
PCBP1	Del_3p14.2	0.782	1
17p-Del	Amp_5p13.2	0.782	1
4p-Del	Del_12p13.2	0.782	1
Del_3p14.2	Del_12p13.2	0.782	1
Del_7q31.1	Del_18p11.31	0.782	1
TP53	NTAN1	0.783	1
TXNDC2	Del_15q21.1	0.783	1
MGA	21q-Del	0.783	1
16p-Amp	Del_1p13.1	0.783	1
21q-Del	Del_5q21.1	0.783	1
Amp_8p11.23	Del_18p11.31	0.783	1
FAM123B	MAPK6	0.784	1
FAM123B	IDH1	0.784	1
FAM123B	ALDH1A3	0.784	1
FAM123B	Del_17q24.3	0.784	1
B2M	Del_15q11.2	0.784	1
FBXW7	PLAGL2	0.784	1
C11orf30	Amp_12p13.33	0.784	1
Amp_16q12.1	Del_15q11.2	0.784	1
TXNDC2	15q-Del	0.785	1
FBXW7	DDX26B	0.785	1
FBXW7	Amp_16q12.1	0.785	1
GRB2	Amp_13q22.1	0.785	1
ZFP36L2	Amp_12p13.33	0.786	1
SELPLG	Amp_13q22.1	0.786	1
C11orf30	CYSLTR2	0.786	1
CTNNB1	C15orf52	0.786	1
CTNNB1	Amp_6p21.1	0.786	1
CTNNB1	Amp_8p11.21	0.786	1
CTNNB1	Del_5q22.2	0.786	1
DDX26B	CYLD	0.786	1
C14orf184	Del_1p36.11	0.786	1
NAA25	Amp_12p13.33	0.786	1
CYLD	Amp_16q12.1	0.786	1
17q-Amp	Amp_12p13.33	0.786	1
17q-Amp	Del_15q22.33	0.786	1
7q-Amp	Del_10q25.2	0.786	1
1p-Del	Del_15q22.33	0.786	1
Amp_13q22.1	Amp_19q13.11	0.786	1
FAM123B	RHOA	0.787	1
FAM123B	Del_6q26	0.787	1
ZFP36L2	PRKDC	0.787	1
PRKDC	17q-Amp	0.787	1
GPATCH8	Amp_8p11.23	0.787	1
ATP6V1B1	Amp_8p11.23	0.787	1
8p-Amp	Del_18q21.2	0.787	1
15q-Del	Del_1p36.11	0.787	1
Amp_8p11.23	Del_6p25.3	0.787	1
Amp_20p11.21	Del_17q24.3	0.787	1
FAM123B	NLRC4	0.788	1
WNT1	Amp_6p21.1	0.788	1
WNT1	Del_3q26.31	0.788	1
WNT1	Del_6q26	0.788	1
WNT1	Del_8q11.1	0.788	1
RHOA	PTGDR	0.788	1
NF2	BCORL1	0.788	1
NF1	THOC7	0.788	1
NF1	UBQLN2	0.788	1
NF1	PLEKHF2	0.788	1
OR4D10	PLAGL2	0.788	1
OR4D10	C14orf184	0.788	1
ALG12	C15orf52	0.788	1
ALG12	Amp_6p21.1	0.788	1
ALG12	Del_6q26	0.788	1
PLAGL2	NAA25	0.788	1
PLAGL2	17q-Amp	0.788	1
PLAGL2	1p-Del	0.788	1
PLAGL2	Del_6p25.3	0.788	1
GPATCH8	C14orf184	0.788	1
LINGO4	7p-Amp	0.788	1
C14orf184	ATP6V1B1	0.788	1
C14orf184	NAA25	0.788	1
C14orf184	RLIM	0.788	1
C14orf184	17q-Amp	0.788	1
C14orf184	1p-Del	0.788	1
PTGDR	C15orf52	0.788	1
PTGDR	Amp_6p21.1	0.788	1
PTGDR	Del_3q26.31	0.788	1
PTGDR	Del_6q26	0.788	1
PTGDR	Del_8q11.1	0.788	1
C15orf52	Del_7q31.1	0.788	1
20q-Amp	Del_10q25.2	0.788	1
Amp_6p21.1	Del_7q31.1	0.788	1
Amp_16q12.1	Del_4q22.1	0.788	1
Del_6q26	Del_7q31.1	0.788	1
Del_7q31.1	Del_8q11.1	0.788	1
Del_12p13.2	Del_15q11.2	0.788	1
C11orf30	SMAD4	0.789	1
CTNNB1	GGT1	0.789	1
CTNNB1	Amp_19q13.11	0.789	1
CTNNB1	Del_9p21.3	0.789	1
BCL9	SMAD4	0.789	1
ATM	1q-Amp	0.789	1
TP53	PRKDC	0.79	1
ACVR1B	Del_3q26.31	0.79	1
RHOA	Del_10q23.31	0.79	1
MPHOSPH10	Amp_8p11.21	0.79	1
RPTN	BCORL1	0.79	1
RPTN	Amp_17q24.1	0.79	1
ECT2	Amp_8p11.21	0.79	1
NLRC4	DCLK2	0.79	1
DCLK2	CHD3	0.79	1
DCLK2	BCORL1	0.79	1
Amp_8p11.21	Del_17q24.3	0.79	1
Del_3q26.31	Del_10q23.31	0.79	1
Del_16p13.3	Del_17p12	0.79	1
APC	PTGDR	0.791	1
CRIPAK	FBXW7	0.791	1
ATXN3L	RB1	0.791	1
GGT1	Del_4q22.1	0.791	1
ATG5	Del_4q22.1	0.791	1
8q-Amp	Del_4q35.1	0.791	1
MLH1	16p-Amp	0.792	1
EGR1	7q-Amp	0.793	1
Amp_20p11.23	Del_5q21.1	0.793	1
TXNDC2	MVK	0.794	1
TXNDC2	ATP6V1B1	0.794	1
TXNDC2	NAA25	0.794	1
TXNDC2	RLIM	0.794	1
TXNDC2	Del_15q15.2	0.794	1
BCOR	21q-Del	0.794	1
ZFP36L2	Amp_5p13.2	0.794	1
CRIPAK	21q-Del	0.794	1
CRIPAK	4p-Del	0.794	1
STARD3NL	8q-Amp	0.794	1
ATXN3L	14q-Del	0.794	1
DIP2B	4p-Del	0.794	1
DIP2B	Amp_17q12	0.794	1
MPHOSPH10	Del_3p14.2	0.794	1
GPATCH8	Amp_5p13.2	0.794	1
IDH1	Amp_17q12	0.794	1
IDH1	Del_3p14.2	0.794	1
UBQLN2	RB1	0.794	1
RB1	KIAA1586	0.794	1
TOP2B	ATP6V1B1	0.794	1
TOP2B	RLIM	0.794	1
TOP2B	Del_6p25.3	0.794	1
C14orf43	Del_3p14.2	0.794	1
ATP6V1B1	Amp_5p13.2	0.794	1
RLIM	Amp_5p13.2	0.794	1
17q-Amp	Amp_5p13.2	0.794	1
20p-Amp	Amp_12p13.33	0.794	1
20p-Amp	Del_15q22.33	0.794	1
14q-Del	Del_10q21.1	0.794	1
14q-Del	Del_16p13.3	0.794	1
Amp_5p13.2	Del_6p25.3	0.794	1
Amp_17q12	Del_17q24.3	0.794	1
SOX9	SLC26A8	0.795	1
CDH1	ATG5	0.795	1
EGR1	GRB2	0.795	1
SLK	4q-Del	0.795	1
SMAD4	4p-Del	0.795	1
APC	7q-Amp	0.796	1
CRIPAK	RBMX	0.796	1
CRIPAK	GMPS	0.796	1
CRIPAK	L1TD1	0.796	1
CRIPAK	C2orf29	0.796	1
CRIPAK	FKBP9	0.796	1
CRIPAK	MAP4K3	0.796	1
CRIPAK	KCTD3	0.796	1
CRIPAK	IDH2	0.796	1
CRIPAK	PLXNA3	0.796	1
CRIPAK	Del_3p26.1	0.796	1
CRIPAK	Del_10q21.1	0.796	1
MAPK6	FMN2	0.796	1
MAPK6	ATXN3L	0.796	1
MAPK6	RBMX	0.796	1
MAPK6	C2orf29	0.796	1
MAPK6	Del_16p13.3	0.796	1
NF2	ATP6V1B1	0.796	1
ATXN3L	IDH1	0.796	1
ATXN3L	ALDH1A3	0.796	1
ATXN3L	Del_17q24.3	0.796	1
RBMX	IDH1	0.796	1
RBMX	ALDH1A3	0.796	1
RBMX	Amp_16p11.2	0.796	1
RBMX	Del_17q24.3	0.796	1
IDH1	FKBP9	0.796	1
IDH1	IDH2	0.796	1
IDH1	Del_3p26.1	0.796	1
SETD2	BCL9	0.796	1
ROS1	Del_3q26.31	0.796	1
ECT2	C2orf29	0.796	1
ECT2	IDH2	0.796	1
ECT2	Del_16p13.3	0.796	1
ALDH1A3	MAP4K3	0.796	1
ALDH1A3	IDH2	0.796	1
ALDH1A3	Del_16p13.3	0.796	1
FKBP9	Del_17q24.3	0.796	1
MAP4K3	Del_17q24.3	0.796	1
13q-Amp	Del_5q21.1	0.796	1
Amp_20q11.21	Del_10q25.2	0.796	1
FAM123B	SMAD4	0.797	1
CDH1	SMAD2	0.797	1
CDH1	SLC26A8	0.797	1
NTAN1	GGT1	0.797	1
NTAN1	PRPS1	0.797	1
NTAN1	Amp_17p11.2	0.797	1
ZFP36L2	SETD2	0.797	1
SELPLG	Del_15q21.1	0.797	1
TPRKB	ATG5	0.797	1
TPRKB	Amp_17p11.2	0.797	1
GPATCH8	8p-Amp	0.797	1
SETD2	1p-Del	0.797	1
SETD2	Del_6p25.3	0.797	1
PTEN	Amp_17p11.2	0.797	1
THOC7	ATG5	0.797	1
THOC7	PRPS1	0.797	1
THOC7	Amp_17p11.2	0.797	1
UBQLN2	GGT1	0.797	1
UBQLN2	Amp_17p11.2	0.797	1
TOP2B	Del_10q23.31	0.797	1
KIAA1586	PRPS1	0.797	1
KIAA1586	Amp_17p11.2	0.797	1
LINGO4	ATG5	0.797	1
IQCD	GGT1	0.797	1
IQCD	PRPS1	0.797	1
PLEKHF2	GGT1	0.797	1
PLEKHF2	Amp_17p11.2	0.797	1
GGT1	PCBP1	0.797	1
GGT1	Del_12p13.2	0.797	1
ATG5	PCBP1	0.797	1
ATG5	Del_12p13.2	0.797	1
PRPS1	PCBP1	0.797	1
PRPS1	Del_12p13.2	0.797	1
PCBP1	Amp_17p11.2	0.797	1
12q-Amp	Amp_13q22.1	0.797	1
Amp_12p13.33	Amp_20q11.21	0.797	1
Amp_17p11.2	Del_12p13.2	0.797	1
Del_15q21.1	Del_19p13.3	0.797	1
TXNDC2	Del_4q22.1	0.798	1
SELPLG	ZBTB20	0.798	1
SELPLG	1q-Amp	0.798	1
SMAD2	1q-Amp	0.798	1
ZBTB20	SLC26A8	0.798	1
1q-Amp	Del_19p13.3	0.798	1
20p-Amp	Del_15q15.2	0.798	1
Amp_5p13.2	Del_4q22.1	0.798	1
APC	ACVR1B	0.799	1
PTCH1	Del_16p13.3	0.799	1
1q-Amp	Del_5q12.1	0.799	1
SOX9	Del_3p14.2	0.8	1
PTGDR	Amp_8p11.21	0.8	1
TMEM126A	Amp_8p11.21	0.8	1
BCOR	Del_15q21.1	0.801	1
KIAA1586	PTCH1	0.801	1
PTCH1	Del_12p13.2	0.801	1
TP53	TMEM126A	0.802	1
B2M	HPS3	0.802	1
STARD3NL	C14orf184	0.802	1
MGA	Del_16q23.1	0.802	1
P2RY13	HPS3	0.802	1
NR1H3	HPS3	0.802	1
PLAGL2	RBM44	0.802	1
PLAGL2	DCLK2	0.802	1
SETD2	Del_1p33	0.802	1
RPTN	C14orf184	0.802	1
PTEN	PCBP1	0.802	1
RBM44	C14orf184	0.802	1
DDX26B	HPS3	0.802	1
DCLK2	C14orf184	0.802	1
HPS3	CYSLTR2	0.802	1
20p-Amp	22q-Del	0.802	1
8p-Amp	Amp_11p15.5	0.802	1
Del_5q21.1	Del_16q23.1	0.802	1
OR4D10	Amp_8p11.21	0.803	1
MVK	Amp_8p11.21	0.803	1
ALG12	PIK3R1	0.803	1
RPTN	12q-Amp	0.803	1
RBM44	12q-Amp	0.803	1
RBM44	Del_16q23.1	0.803	1
THOC7	Del_5q12.1	0.803	1
PIK3R1	PTGDR	0.803	1
IQCD	Del_5q12.1	0.803	1
Del_5q22.2	Del_15q22.33	0.803	1
ZFP36L2	8p-Del	0.804	1
WNT1	16p-Amp	0.804	1
WNT1	5q-Del	0.804	1
OR4D10	8p-Del	0.804	1
ALG12	16p-Amp	0.804	1
ALG12	5q-Del	0.804	1
RLIM	8p-Del	0.804	1
PTGDR	16p-Amp	0.804	1
PTGDR	5q-Del	0.804	1
TMEM126A	5q-Del	0.804	1
16p-Amp	Del_7q31.1	0.804	1
5q-Del	Del_7q31.1	0.804	1
APC	MVK	0.805	1
APC	GPATCH8	0.805	1
APC	RLIM	0.805	1
APC	1p-Del	0.805	1
APC	Del_6p25.3	0.805	1
UBQLN2	SMAD4	0.805	1
C15orf52	Del_21q11.2	0.805	1
7q-Amp	21q-Del	0.805	1
Amp_13q12.13	Del_5q21.1	0.805	1
ARID1A	SELPLG	0.806	1
BCOR	16p-Amp	0.806	1
MLH1	SLC26A8	0.806	1
MLH1	Amp_19q13.11	0.806	1
DIP2B	16p-Amp	0.806	1
EGR1	Amp_8p11.23	0.806	1
ECT2	Del_22q13.32	0.806	1
12q-Amp	13q-Amp	0.806	1
Del_15q15.2	Del_19p13.3	0.806	1
PRKDC	12q-Amp	0.807	1
MVK	ASXL1	0.807	1
ASXL1	ATP6V1B1	0.807	1
17q-Amp	15q-Del	0.807	1
7q-Amp	Del_14q31.1	0.807	1
Amp_8q24.21	Del_8q11.1	0.807	1
ZFP36L2	BCL9	0.808	1
ZFP36L2	CYLD	0.808	1
MGA	Amp_17p11.2	0.808	1
C11orf30	ATP6V1B1	0.808	1
C11orf30	17q-Amp	0.808	1
C11orf30	Del_6p25.3	0.808	1
RPTN	PIK3R1	0.808	1
DCLK2	PIK3R1	0.808	1
BCL9	Del_6p25.3	0.808	1
CYLD	17q-Amp	0.808	1
CYLD	Del_6p25.3	0.808	1
PRPS1	Del_5q21.1	0.808	1
Amp_17q12	Del_4q35.1	0.808	1
BCOR	Amp_12p13.33	0.809	1
SELPLG	20q-Amp	0.809	1
KDM6A	Del_5q22.2	0.809	1
HPS3	Amp_12p13.33	0.809	1
ALG12	Amp_12p13.33	0.81	1
ALG12	Del_5q22.2	0.81	1
ALPK2	TMEM126A	0.81	1
ATM	GRB2	0.81	1
PTGDR	Del_15q22.33	0.81	1
TMEM126A	Del_15q22.33	0.81	1
SMAD4	Amp_8p11.23	0.81	1
20p-Amp	8p-Del	0.81	1
Del_3p14.2	Del_18q21.2	0.81	1
Del_7q31.1	Del_15q22.33	0.81	1
FAM123B	NF1	0.811	1
FAM123B	PLAGL2	0.811	1
FAM123B	C14orf184	0.811	1
FAM123B	Del_5q22.2	0.811	1
SELPLG	8q-Amp	0.811	1
MGA	NR1H3	0.811	1
MGA	CYSLTR2	0.811	1
MGA	Amp_16q12.1	0.811	1
P2RY13	Del_5q21.1	0.811	1
RBMX	Amp_8q24.21	0.811	1
DCLK2	7q-Amp	0.811	1
Amp_8q24.21	Del_16p13.3	0.811	1
Amp_13q12.13	Del_3p14.2	0.811	1
DIP2B	FBXW7	0.812	1
NLRC4	SLK	0.812	1
CHD3	12q-Amp	0.812	1
BCORL1	Del_16q23.1	0.812	1
Amp_17q24.1	Del_16q23.1	0.812	1
ACVR1B	ATM	0.813	1
ACVR1B	Amp_17q12	0.813	1
THOC7	Del_1p13.1	0.813	1
UBQLN2	Del_1p13.1	0.813	1
ALDH1A3	Amp_8p11.23	0.813	1
LINGO4	Del_1p13.1	0.813	1
PLEKHF2	Del_1p13.1	0.813	1
1q-Amp	Del_1p13.1	0.813	1
Amp_17q12	Del_10q23.31	0.813	1
BCOR	Del_15q15.2	0.814	1
ATXN3L	GMPS	0.814	1
ATXN3L	KCTD3	0.814	1
ATXN3L	Del_16p13.3	0.814	1
RBMX	GMPS	0.814	1
RBMX	IDH2	0.814	1
ALG12	Amp_8q24.21	0.814	1
GMPS	Del_16p13.3	0.814	1
C2orf29	MAP4K3	0.814	1
C2orf29	Del_16p13.3	0.814	1
FKBP9	IDH2	0.814	1
FKBP9	Del_16p13.3	0.814	1
MAP4K3	Del_10q21.1	0.814	1
KCTD3	IDH2	0.814	1
PTGDR	Amp_8q24.21	0.814	1
IDH2	PLXNA3	0.814	1
IDH2	Del_10q21.1	0.814	1
Del_7q31.1	Del_8p22	0.814	1
Del_10q21.1	Del_16p13.3	0.814	1
TP53	Amp_17q12	0.815	1
TP53	Del_3p14.2	0.815	1
FAM123B	RBMX	0.815	1
FAM123B	KCTD3	0.815	1
FAM123B	Del_10q21.1	0.815	1
SELPLG	MPHOSPH10	0.815	1
CRIPAK	SMAD2	0.815	1
CRIPAK	SLC26A8	0.815	1
CRIPAK	Del_19p13.3	0.815	1
RHOA	BCORL1	0.815	1
OR4D10	PTEN	0.815	1
SMAD2	MPHOSPH10	0.815	1
SMAD2	ECT2	0.815	1
SMAD2	Amp_16p11.2	0.815	1
MPHOSPH10	Amp_19q13.11	0.815	1
IDH1	SLC26A8	0.815	1
ECT2	Del_9p21.3	0.815	1
NLRC4	C15orf52	0.815	1
NLRC4	Amp_6p21.1	0.815	1
NLRC4	Del_3q26.31	0.815	1
BCORL1	Amp_6p21.1	0.815	1
Amp_6p21.1	Amp_17q24.1	0.815	1
Amp_17q24.1	Del_3q26.31	0.815	1
Amp_19q13.11	Del_17q24.3	0.815	1
SOX9	GGT1	0.816	1
SOX9	PRPS1	0.816	1
SOX9	Del_16q23.1	0.816	1
ACVR1B	C11orf30	0.816	1
RHOA	C14orf184	0.816	1
NF1	Amp_8p11.21	0.816	1
ASXL1	Amp_11p15.5	0.816	1
PLAGL2	Amp_6p21.1	0.816	1
PLAGL2	Del_3q26.31	0.816	1
PLAGL2	Del_6q26	0.816	1
PLAGL2	Del_8q11.1	0.816	1
EGR1	GGT1	0.816	1
EGR1	ATG5	0.816	1
EGR1	21q-Del	0.816	1
EGR1	Amp_17p11.2	0.816	1
EGR1	Amp_17q12	0.816	1
EGR1	Del_3p14.2	0.816	1
C14orf184	C15orf52	0.816	1
C14orf184	Del_8q11.1	0.816	1
PRPS1	GRB2	0.816	1
GRB2	Amp_17p11.2	0.816	1
GRB2	Del_3p14.2	0.816	1
8p-Amp	17p-Del	0.816	1
15q-Del	Del_1p33	0.816	1
TXNDC2	STARD3NL	0.817	1
TXNDC2	DCLK2	0.817	1
ZFP36L2	Del_4q22.1	0.817	1
RPTN	TOP2B	0.817	1
TOP2B	DCLK2	0.817	1
NAA25	Del_4q22.1	0.817	1
5q-Del	Del_10q23.31	0.817	1
Amp_8p11.21	Del_18p11.31	0.817	1
SOX9	FMN2	0.818	1
ACVR1B	PIK3R1	0.818	1
WNT1	8p-Amp	0.818	1
FMN2	C14orf184	0.818	1
STARD3NL	Del_5q22.2	0.818	1
NF2	Del_16q23.1	0.818	1
MGA	SMAD4	0.818	1
ATXN3L	21q-Del	0.818	1
RBMX	Del_3p14.2	0.818	1
ALG12	SETD2	0.818	1
ZBTB20	Amp_16q12.1	0.818	1
SETD2	PTGDR	0.818	1
ROS1	C14orf184	0.818	1
DDX26B	1q-Amp	0.818	1
L1TD1	Del_3p14.2	0.818	1
C2orf29	21q-Del	0.818	1
C2orf29	Del_3p14.2	0.818	1
FKBP9	Del_3p14.2	0.818	1
CYSLTR2	1q-Amp	0.818	1
KCTD3	21q-Del	0.818	1
TMEM126A	8p-Amp	0.818	1
PLXNA3	Del_3p14.2	0.818	1
1q-Amp	Amp_16q12.1	0.818	1
Del_14q31.1	Del_16q23.1	0.818	1
CYLD	Amp_8p11.21	0.819	1
1q-Amp	Del_15q11.2	0.819	1
SELPLG	Del_18p11.31	0.82	1
SETD2	Amp_12p13.33	0.82	1
ALPK2	8p-Amp	0.82	1
TP53	RBMX	0.821	1
TP53	Del_10q21.1	0.821	1
SOX9	DDX26B	0.821	1
NTAN1	ALG12	0.821	1
NTAN1	PTGDR	0.821	1
NTAN1	TMEM126A	0.821	1
NTAN1	Del_7q31.1	0.821	1
ZFP36L2	Del_15q11.2	0.821	1
WNT1	TPRKB	0.821	1
WNT1	THOC7	0.821	1
WNT1	KIAA1586	0.821	1
WNT1	IQCD	0.821	1
WNT1	PLEKHF2	0.821	1
WNT1	PCBP1	0.821	1
WNT1	Del_12p13.2	0.821	1
ALG12	KIAA1586	0.821	1
ALG12	PCBP1	0.821	1
ALG12	Del_12p13.2	0.821	1
TPRKB	TMEM126A	0.821	1
TPRKB	Del_7q31.1	0.821	1
RPTN	PTCH1	0.821	1
THOC7	TMEM126A	0.821	1
THOC7	Del_7q31.1	0.821	1
UBQLN2	PTGDR	0.821	1
UBQLN2	TMEM126A	0.821	1
UBQLN2	Del_7q31.1	0.821	1
KIAA1586	TMEM126A	0.821	1
DCLK2	PTCH1	0.821	1
LINGO4	TMEM126A	0.821	1
LINGO4	Del_7q31.1	0.821	1
IQCD	PTGDR	0.821	1
IQCD	TMEM126A	0.821	1
IQCD	Del_7q31.1	0.821	1
PLEKHF2	PTGDR	0.821	1
PLEKHF2	TMEM126A	0.821	1
PLEKHF2	Del_7q31.1	0.821	1
CYLD	Del_4q22.1	0.821	1
PTGDR	PCBP1	0.821	1
PTGDR	Del_12p13.2	0.821	1
TMEM126A	PCBP1	0.821	1
TMEM126A	Del_12p13.2	0.821	1
PCBP1	Del_7q31.1	0.821	1
Amp_16p11.2	Del_5q12.1	0.821	1
Amp_17q24.1	Del_15q11.2	0.821	1
Del_7q31.1	Del_12p13.2	0.821	1
ARID1A	Amp_17q24.1	0.822	1
MLH1	C11orf30	0.822	1
MLH1	CYLD	0.822	1
8p-Amp	Del_18q12.2	0.822	1
RHOA	Del_4q35.1	0.823	1
LINGO4	Amp_11p15.5	0.823	1
PLEKHF2	Del_1p33	0.823	1
HPS3	RLIM	0.823	1
HPS3	Del_6p25.3	0.823	1
13q-Amp	Del_1p36.11	0.823	1
20p-Amp	Del_7q31.1	0.823	1
Amp_11p15.5	Del_12p13.2	0.823	1
Del_1p33	Del_12p13.2	0.823	1
RBMX	ROS1	0.824	1
PLAGL2	Del_21q11.2	0.824	1
ROS1	C2orf29	0.824	1
C14orf184	Del_22q13.32	0.824	1
13q-Amp	Amp_11p15.5	0.824	1
7p-Amp	Del_10q25.2	0.824	1
Amp_20q13.12	Del_3q26.31	0.824	1
NTAN1	Amp_8p11.21	0.825	1
ASXL1	ALG12	0.825	1
ASXL1	Del_7q31.1	0.825	1
ROS1	Del_16q23.1	0.825	1
THOC7	Amp_8p11.21	0.825	1
THOC7	Del_15q21.1	0.825	1
LINGO4	Amp_8p11.21	0.825	1
LINGO4	Del_15q21.1	0.825	1
PTGDR	15q-Del	0.825	1
TMEM126A	15q-Del	0.825	1
14q-Del	Del_9p21.3	0.825	1
14q-Del	Del_19p13.3	0.825	1
15q-Del	Del_7q31.1	0.825	1
Amp_20p11.23	Del_5q22.2	0.825	1
22q-Del	Amp_20p11.23	0.826	1
CRIPAK	Del_4q35.1	0.827	1
RHOA	12q-Amp	0.827	1
RHOA	Del_16q23.1	0.827	1
STARD3NL	8p-Amp	0.827	1
ZBTB20	8q-Amp	0.827	1
DCLK2	8p-Amp	0.827	1
SLK	Amp_6p21.1	0.827	1
1q-Amp	8q-Amp	0.827	1
Del_8q11.1	Del_16q23.1	0.827	1
TP53	GPATCH8	0.828	1
TP53	RLIM	0.828	1
TP53	17q-Amp	0.828	1
TP53	Del_6p25.3	0.828	1
CTNNB1	CYSLTR2	0.828	1
CTNNB1	Amp_16q12.1	0.828	1
8q-Amp	15q-Del	0.828	1
8p-Del	Del_1p33	0.828	1
Del_10q25.2	Del_16q23.1	0.828	1
FAM123B	CTNNB1	0.829	1
BMPR2	8p-Amp	0.829	1
MGA	Amp_8p11.23	0.829	1
PTEN	ALDH1A3	0.829	1
TOP2B	NLRC4	0.829	1
NLRC4	Amp_5p13.2	0.829	1
21q-Del	Amp_13q22.1	0.829	1
Amp_5p13.2	Amp_17q24.1	0.829	1
Amp_8p11.23	Del_3p14.2	0.829	1
RNF43	C14orf184	0.83	1
ACVR1B	ALPK2	0.83	1
ACVR1B	Amp_12p13.33	0.83	1
RHOA	13q-Amp	0.83	1
STARD3NL	C11orf30	0.83	1
STARD3NL	CYLD	0.83	1
PLAGL2	16p-Amp	0.83	1
PLAGL2	8q-Amp	0.83	1
PLAGL2	5q-Del	0.83	1
C11orf30	RPTN	0.83	1
CTNNB1	1q-Amp	0.83	1
C14orf184	16p-Amp	0.83	1
C14orf184	5q-Del	0.83	1
Amp_8p11.23	Del_5q22.2	0.83	1
Del_5q22.2	Del_10q23.31	0.83	1
SELPLG	ATXN3L	0.831	1
SELPLG	RBMX	0.831	1
SELPLG	C2orf29	0.831	1
SELPLG	FKBP9	0.831	1
SELPLG	MAP4K3	0.831	1
SELPLG	KCTD3	0.831	1
SELPLG	Del_10q21.1	0.831	1
SELPLG	Del_16p13.3	0.831	1
KDM6A	Amp_8p11.23	0.831	1
ATXN3L	SMAD2	0.831	1
ATXN3L	Del_9p21.3	0.831	1
ATXN3L	Del_19p13.3	0.831	1
RBMX	SMAD2	0.831	1
SMAD2	C2orf29	0.831	1
SMAD2	KCTD3	0.831	1
SMAD2	IDH2	0.831	1
SMAD2	PLXNA3	0.831	1
ECT2	8p-Del	0.831	1
L1TD1	Del_9p21.3	0.831	1
C2orf29	SLC26A8	0.831	1
C2orf29	Del_9p21.3	0.831	1
C2orf29	Del_19p13.3	0.831	1
PTCH1	Amp_8q24.21	0.831	1
SLC26A8	Del_10q21.1	0.831	1
FKBP9	Del_9p21.3	0.831	1
MAP4K3	Del_19p13.3	0.831	1
IDH2	Del_19p13.3	0.831	1
PLXNA3	Amp_19q13.11	0.831	1
Amp_5p13.2	Amp_13q12.13	0.831	1
Amp_19q13.11	Del_10q21.1	0.831	1
Amp_19q13.11	Del_16p13.3	0.831	1
Del_3p26.1	Del_9p21.3	0.831	1
Del_9p21.3	Del_10q21.1	0.831	1
Del_9p21.3	Del_16p13.3	0.831	1
BMPR2	PRPS1	0.832	1
BMPR2	21q-Del	0.832	1
FMN2	16p-Amp	0.832	1
LINGO4	Del_15q15.2	0.832	1
PLEKHF2	Del_1p36.11	0.832	1
PTGDR	13q-Amp	0.832	1
PTGDR	Del_4q22.1	0.832	1
TMEM126A	Del_4q22.1	0.832	1
SMAD4	Del_4q35.1	0.832	1
13q-Amp	Del_7q31.1	0.832	1
22q-Del	Del_7q31.1	0.832	1
CRIPAK	P2RY13	0.833	1
CRIPAK	DDX26B	0.833	1
CRIPAK	Amp_16q12.1	0.833	1
MAPK6	NR1H3	0.833	1
P2RY13	IDH1	0.833	1
P2RY13	ECT2	0.833	1
NR1H3	Del_17q24.3	0.833	1
CTNNB1	Del_16q23.1	0.833	1
ECT2	CYSLTR2	0.833	1
ECT2	Amp_16q12.1	0.833	1
ALDH1A3	Amp_16q12.1	0.833	1
C14orf43	CYSLTR2	0.833	1
GRB2	Del_15q11.2	0.833	1
Amp_16p11.2	Del_1p13.1	0.833	1
Amp_16q12.1	Del_17q24.3	0.833	1
Amp_20q13.12	Del_10q25.2	0.833	1
BCOR	NTAN1	0.834	1
BCOR	THOC7	0.834	1
BCOR	KIAA1586	0.834	1
BCOR	PLEKHF2	0.834	1
KDM6A	PCBP1	0.834	1
DIP2B	TPRKB	0.834	1
DIP2B	IQCD	0.834	1
ATM	16p-Amp	0.834	1
IDH2	Del_22q13.32	0.834	1
GRB2	8q-Amp	0.834	1
SMAD4	7q-Amp	0.834	1
HPS3	SMAD4	0.835	1
GGT1	ATG5	0.835	1
GGT1	PRPS1	0.835	1
ATG5	PRPS1	0.835	1
ATG5	Amp_17p11.2	0.835	1
PRPS1	Amp_17p11.2	0.835	1
APC	P2RY13	0.836	1
APC	DDX26B	0.836	1
SOX9	TXNDC2	0.836	1
TXNDC2	PRKDC	0.836	1
B2M	CDH1	0.836	1
CDH1	NR1H3	0.836	1
CDH1	Amp_16q12.1	0.836	1
ATXN3L	FBXW7	0.836	1
FBXW7	GMPS	0.836	1
FBXW7	L1TD1	0.836	1
ASXL1	DCLK2	0.836	1
ASXL1	Del_5q22.2	0.836	1
PIK3R1	4p-Del	0.836	1
C14orf184	Del_4q35.1	0.836	1
ATM	12q-Amp	0.836	1
15q-Del	Del_5q22.2	0.836	1
Amp_8p11.21	Amp_11p15.5	0.836	1
ZFP36L2	1q-Amp	0.837	1
ZFP36L2	Del_5q21.1	0.837	1
WNT1	GRB2	0.837	1
OR4D10	MGA	0.837	1
MVK	1q-Amp	0.837	1
FBXW7	16p-Amp	0.837	1
ALG12	GRB2	0.837	1
ZBTB20	GPATCH8	0.837	1
ZBTB20	RLIM	0.837	1
ZBTB20	Del_6p25.3	0.837	1
EGR1	PTGDR	0.837	1
EGR1	TMEM126A	0.837	1
EGR1	Del_7q31.1	0.837	1
ATP6V1B1	1q-Amp	0.837	1
ATP6V1B1	Amp_8q24.21	0.837	1
RLIM	Del_8p22	0.837	1
TMEM126A	GRB2	0.837	1
GRB2	Del_7q31.1	0.837	1
SLK	Del_21q11.2	0.837	1
17q-Amp	1q-Amp	0.837	1
17q-Amp	Del_5q21.1	0.837	1
1q-Amp	Del_6p25.3	0.837	1
8p-Amp	Amp_13q12.13	0.837	1
Amp_17q24.1	Del_4q35.1	0.837	1
Del_16q23.1	Del_22q13.32	0.837	1
FAM123B	TXNDC2	0.838	1
FAM123B	TOP2B	0.838	1
B2M	Del_15q15.2	0.838	1
13q-Amp	Del_16p13.3	0.838	1
Amp_8p11.23	Del_17p12	0.838	1
Amp_20q12	Del_3p14.2	0.838	1
TXNDC2	C15orf52	0.839	1
RHOA	Amp_5p13.2	0.839	1
TOP2B	Del_3q26.31	0.839	1
PIK3R1	4q-Del	0.839	1
C14orf184	7p-Amp	0.839	1
BCORL1	16p-Amp	0.839	1
16p-Amp	Amp_17q24.1	0.839	1
1q-Amp	Amp_8q24.21	0.839	1
15q-Del	Amp_8q24.21	0.839	1
5q-Del	Amp_17q24.1	0.839	1
Amp_5p13.2	Amp_6p21.1	0.839	1
TP53	16p-Amp	0.84	1
TP53	5q-Del	0.84	1
KDM6A	1q-Amp	0.84	1
RHOA	PIK3R1	0.84	1
ALG12	SMAD4	0.84	1
PTCH1	Amp_19q13.11	0.84	1
PIK3R1	Del_3q26.31	0.84	1
PTGDR	SMAD4	0.84	1
16p-Amp	Del_21q11.2	0.84	1
Amp_11p15.5	Del_1p33	0.84	1
Amp_17q12	Del_14q31.1	0.84	1
SELPLG	4p-Del	0.841	1
SELPLG	Amp_17q12	0.841	1
RHOA	SMAD4	0.841	1
DIP2B	Del_1p13.1	0.841	1
RPTN	8p-Del	0.841	1
CTNNB1	Del_8p23.2	0.841	1
SLC26A8	Del_3p14.2	0.841	1
Amp_19q13.11	Del_3p14.2	0.841	1
Amp_20p11.23	Del_12p13.2	0.841	1
Del_3p14.2	Del_9p21.3	0.841	1
CDH1	12q-Amp	0.842	1
FBXW7	12q-Amp	0.842	1
C2orf29	Del_5q12.1	0.842	1
1q-Amp	7p-Amp	0.842	1
ARID1A	CYSLTR2	0.843	1
DCLK2	HPS3	0.843	1
HPS3	Del_4q22.1	0.843	1
BCORL1	Amp_8p11.21	0.843	1
GRB2	Amp_8q24.21	0.843	1
GRB2	Del_1p13.1	0.843	1
Del_5q22.2	Del_14q31.1	0.843	1
ACVR1B	LINGO4	0.844	1
ACVR1B	PLEKHF2	0.844	1
TPRKB	PLAGL2	0.844	1
TPRKB	C14orf184	0.844	1
PLAGL2	THOC7	0.844	1
PLAGL2	KIAA1586	0.844	1
PLAGL2	IQCD	0.844	1
PLAGL2	PCBP1	0.844	1
PLAGL2	Del_12p13.2	0.844	1
THOC7	C14orf184	0.844	1
THOC7	Del_10q23.31	0.844	1
UBQLN2	C14orf184	0.844	1
KIAA1586	C14orf184	0.844	1
LINGO4	C14orf184	0.844	1
LINGO4	Del_10q23.31	0.844	1
C14orf184	IQCD	0.844	1
C14orf184	PLEKHF2	0.844	1
C14orf184	PCBP1	0.844	1
C14orf184	Del_12p13.2	0.844	1
PLEKHF2	Del_10q23.31	0.844	1
Amp_12p13.33	Amp_20q12	0.844	1
Del_10q23.31	Del_12p13.2	0.844	1
STARD3NL	Del_4q22.1	0.845	1
GRB2	7p-Amp	0.845	1
Amp_5p13.2	Amp_13q22.1	0.845	1
MLH1	8p-Del	0.846	1
WNT1	MGA	0.846	1
MGA	ALG12	0.846	1
MGA	TMEM126A	0.846	1
FBXW7	Amp_12p13.33	0.846	1
CTNNB1	TMEM126A	0.846	1
THOC7	14q-Del	0.846	1
BCL9	BCORL1	0.846	1
PTGDR	Del_5q21.1	0.846	1
TMEM126A	Del_5q21.1	0.846	1
Amp_11p15.5	Del_17q24.3	0.846	1
RNF43	12q-Amp	0.847	1
RNF43	Del_16q23.1	0.847	1
SOX9	ZFP36L2	0.847	1
SOX9	OR4D10	0.847	1
SOX9	ATP6V1B1	0.847	1
CDH1	DIP2B	0.847	1
SELPLG	SMAD2	0.847	1
SELPLG	SLC26A8	0.847	1
SELPLG	Amp_19q13.11	0.847	1
CRIPAK	PIK3R1	0.847	1
SMAD2	SLC26A8	0.847	1
SMAD2	Amp_19q13.11	0.847	1
SMAD2	Del_9p21.3	0.847	1
IDH1	PIK3R1	0.847	1
ECT2	PIK3R1	0.847	1
ALDH1A3	PIK3R1	0.847	1
PIK3R1	Amp_16p11.2	0.847	1
PIK3R1	Del_17q24.3	0.847	1
SLC26A8	Amp_19q13.11	0.847	1
13q-Amp	8p-Amp	0.847	1
Amp_19q13.11	Del_19p13.3	0.847	1
Del_15q11.2	Del_16q23.1	0.847	1
B2M	C2orf29	0.848	1
B2M	IDH2	0.848	1
B2M	PLXNA3	0.848	1
B2M	Del_10q21.1	0.848	1
MLH1	HPS3	0.848	1
CRIPAK	Del_15q11.2	0.848	1
RHOA	Amp_12p13.33	0.848	1
P2RY13	ATXN3L	0.848	1
P2RY13	Del_3p26.1	0.848	1
ATXN3L	NR1H3	0.848	1
RBMX	NR1H3	0.848	1
RBMX	Amp_16q12.1	0.848	1
NR1H3	MAP4K3	0.848	1
NR1H3	IDH2	0.848	1
PLAGL2	PIK3R1	0.848	1
ALPK2	Amp_6p21.1	0.848	1
ALPK2	Del_3q26.31	0.848	1
DDX26B	GMPS	0.848	1
DDX26B	L1TD1	0.848	1
DDX26B	Del_10q21.1	0.848	1
PTCH1	8p-Amp	0.848	1
PIK3R1	C14orf184	0.848	1
GGT1	21q-Del	0.848	1
GGT1	4p-Del	0.848	1
CYSLTR2	MAP4K3	0.848	1
CYSLTR2	KCTD3	0.848	1
CYSLTR2	Del_3p26.1	0.848	1
CYSLTR2	Del_10q21.1	0.848	1
ATG5	21q-Del	0.848	1
ATG5	Amp_17q12	0.848	1
PRPS1	Amp_17q12	0.848	1
IDH2	Amp_16q12.1	0.848	1
C15orf52	Del_5q22.2	0.848	1
4p-Del	Amp_17p11.2	0.848	1
Amp_12p13.33	Del_6q26	0.848	1
Amp_16q12.1	Del_3p26.1	0.848	1
Amp_16q12.1	Del_10q21.1	0.848	1
Amp_16q12.1	Del_16p13.3	0.848	1
Del_3q26.31	Del_15q22.33	0.848	1
Del_6q26	Del_15q22.33	0.848	1
ACVR1B	RB1	0.849	1
ATXN3L	Amp_13q12.13	0.849	1
ZBTB20	RB1	0.849	1
BCORL1	Del_3p14.2	0.849	1
7q-Amp	Del_6q26	0.849	1
4p-Del	Amp_17q24.1	0.849	1
Amp_17q24.1	Del_3p14.2	0.849	1
APC	ASXL1	0.85	1
TP53	KDM6A	0.85	1
RB1	GRB2	0.85	1
GMPS	SMAD4	0.85	1
C2orf29	SMAD4	0.85	1
FKBP9	SMAD4	0.85	1
12q-Amp	5q-Del	0.85	1
16p-Amp	Del_10q25.2	0.85	1
7p-Amp	14q-Del	0.85	1
18p-Del	Amp_8p11.21	0.85	1
21q-Del	Amp_12p13.33	0.85	1
5q-Del	Del_10q25.2	0.85	1
5q-Del	Del_16q23.1	0.85	1
Amp_12p13.33	Del_3p14.2	0.85	1
Amp_17q12	Del_15q22.33	0.85	1
Del_3p14.2	Del_15q22.33	0.85	1
APC	TOP2B	0.851	1
CDH1	ALG12	0.851	1
CDH1	TMEM126A	0.851	1
CDH1	Del_7q31.1	0.851	1
ZFP36L2	MAPK6	0.851	1
ZFP36L2	IDH1	0.851	1
ZFP36L2	Del_17q24.3	0.851	1
CRIPAK	GPATCH8	0.851	1
CRIPAK	RLIM	0.851	1
MAPK6	NAA25	0.851	1
RHOA	C11orf30	0.851	1
OR4D10	ECT2	0.851	1
OR4D10	Amp_16p11.2	0.851	1
MVK	MPHOSPH10	0.851	1
MPHOSPH10	RLIM	0.851	1
MPHOSPH10	Del_6p25.3	0.851	1
IDH1	ATP6V1B1	0.851	1
IDH1	NAA25	0.851	1
IDH1	RLIM	0.851	1
IDH1	17q-Amp	0.851	1
ALDH1A3	RLIM	0.851	1
ALDH1A3	1p-Del	0.851	1
ALDH1A3	Del_6p25.3	0.851	1
PTCH1	Amp_8p11.21	0.851	1
C14orf43	RLIM	0.851	1
C14orf43	Del_6p25.3	0.851	1
RLIM	Amp_16p11.2	0.851	1
CYLD	C15orf52	0.851	1
CYLD	Amp_6p21.1	0.851	1
1p-Del	Del_17q24.3	0.851	1
ROS1	Amp_19q13.11	0.852	1
ROS1	Del_9p21.3	0.852	1
GRB2	Del_1p33	0.852	1
SMAD4	Del_8p23.2	0.852	1
8q-Amp	Del_3p14.2	0.852	1
14q-Del	Amp_8p11.23	0.852	1
22q-Del	Del_5q22.2	0.852	1
Amp_20p11.23	Del_1p36.11	0.852	1
Amp_20p11.23	Del_21q11.2	0.852	1
SOX9	WNT1	0.853	1
SOX9	TMEM126A	0.853	1
ACVR1B	1q-Amp	0.853	1
NF2	ATXN3L	0.853	1
PRKDC	GGT1	0.853	1
PRKDC	ATG5	0.853	1
PRKDC	Amp_17p11.2	0.853	1
ATXN3L	Del_14q31.1	0.853	1
C2orf29	Del_4q35.1	0.853	1
IQCD	4q-Del	0.853	1
PLEKHF2	4q-Del	0.853	1
GGT1	Amp_8p11.23	0.853	1
GGT1	Amp_20p11.21	0.853	1
PRPS1	Amp_8p11.23	0.853	1
PCBP1	4q-Del	0.853	1
7q-Amp	Del_5q12.1	0.853	1
17p-Del	Del_6p25.3	0.853	1
18q-Del	Amp_17p11.2	0.853	1
Amp_8p11.23	Amp_17p11.2	0.853	1
Amp_20p11.23	Del_15q11.2	0.853	1
Del_10q21.1	Del_14q31.1	0.853	1
WNT1	GGT1	0.854	1
WNT1	ATG5	0.854	1
WNT1	Amp_17p11.2	0.854	1
NF1	Del_3q26.31	0.854	1
ALG12	GGT1	0.854	1
ALG12	ATG5	0.854	1
ALG12	Amp_17p11.2	0.854	1
PLAGL2	Amp_12p13.33	0.854	1
ALPK2	C14orf184	0.854	1
C2orf29	Del_1p13.1	0.854	1
C14orf184	Amp_12p13.33	0.854	1
C14orf184	Del_5q22.2	0.854	1
GGT1	TMEM126A	0.854	1
ATG5	TMEM126A	0.854	1
ATG5	Del_7q31.1	0.854	1
PRPS1	TMEM126A	0.854	1
PRPS1	Del_7q31.1	0.854	1
PTGDR	Amp_17p11.2	0.854	1
TMEM126A	Amp_17p11.2	0.854	1
7p-Amp	Amp_6p21.1	0.854	1
7p-Amp	Del_6q26	0.854	1
7p-Amp	Del_8q11.1	0.854	1
18p-Del	Del_3p14.2	0.854	1
Amp_17p11.2	Del_7q31.1	0.854	1
KDM6A	Del_1p33	0.855	1
DIP2B	Del_1p33	0.855	1
ASXL1	ZBTB20	0.855	1
EGR1	PTCH1	0.855	1
8q-Amp	4q-Del	0.855	1
15q-Del	Del_10q23.31	0.855	1
TP53	CYLD	0.856	1
STARD3NL	1q-Amp	0.856	1
ZBTB20	DCLK2	0.856	1
RBM44	1q-Amp	0.856	1
PTCH1	1q-Amp	0.856	1
13q-Amp	Amp_8p11.23	0.856	1
8p-Amp	Del_3q26.31	0.856	1
8p-Amp	Del_8q11.1	0.856	1
Del_1p13.1	Del_10q23.31	0.856	1
ARID1A	ASXL1	0.857	1
CRIPAK	Amp_12p13.33	0.857	1
CRIPAK	Del_5q22.2	0.857	1
CRIPAK	Del_15q22.33	0.857	1
MPHOSPH10	Amp_12p13.33	0.857	1
MPHOSPH10	Del_5q22.2	0.857	1
IDH1	Amp_12p13.33	0.857	1
1q-Amp	Amp_20p11.21	0.857	1
7p-Amp	Del_21q11.2	0.857	1
8p-Del	Amp_8p11.23	0.857	1
Amp_20q12	Del_3q26.31	0.857	1
ACVR1B	PTCH1	0.858	1
BCOR	IDH1	0.858	1
BCOR	Amp_16p11.2	0.858	1
CRIPAK	KDM6A	0.858	1
CRIPAK	DIP2B	0.858	1
KDM6A	MAPK6	0.858	1
KDM6A	MPHOSPH10	0.858	1
KDM6A	IDH1	0.858	1
FMN2	FBXW7	0.858	1
DIP2B	ALDH1A3	0.858	1
GGT1	17p-Del	0.858	1
14q-Del	Del_10q23.31	0.858	1
17p-Del	Amp_8p11.23	0.858	1
Del_4q35.1	Del_16q23.1	0.858	1
FAM123B	LINGO4	0.859	1
FAM123B	IQCD	0.859	1
FAM123B	PLEKHF2	0.859	1
TXNDC2	TOP2B	0.859	1
NF2	ATG5	0.859	1
EGR1	C14orf184	0.859	1
TOP2B	Amp_5p13.2	0.859	1
GGT1	Del_14q31.1	0.859	1
ATG5	Del_14q31.1	0.859	1
4p-Del	Amp_20p11.23	0.859	1
Amp_8q24.21	Del_5q22.2	0.859	1
Amp_8q24.21	Del_15q22.33	0.859	1
TXNDC2	BMPR2	0.86	1
ZFP36L2	Del_15q21.1	0.86	1
RHOA	RB1	0.86	1
ATXN3L	8p-Del	0.86	1
SETD2	C14orf184	0.86	1
C11orf30	12q-Amp	0.86	1
RB1	C15orf52	0.86	1
C2orf29	8p-Del	0.86	1
BCL9	SLK	0.86	1
BCL9	12q-Amp	0.86	1
7q-Amp	Del_19p13.3	0.86	1
8p-Del	Del_10q21.1	0.86	1
8p-Del	Del_16p13.3	0.86	1
Amp_13q22.1	Del_16p13.3	0.86	1
Del_5q12.1	Del_15q21.1	0.86	1
Del_9p21.3	Del_22q13.32	0.86	1
FAM123B	BCL9	0.861	1
BCOR	GRB2	0.861	1
SELPLG	Amp_8q24.21	0.861	1
KDM6A	GRB2	0.861	1
TOP2B	16p-Amp	0.861	1
TOP2B	5q-Del	0.861	1
GRB2	13q-Amp	0.861	1
20q-Amp	Del_3p14.2	0.861	1
21q-Del	Amp_17q12	0.861	1
Del_8p22	Del_9p21.3	0.861	1
TP53	CRIPAK	0.862	1
TP53	MAPK6	0.862	1
TP53	ATG5	0.862	1
TP53	Amp_17p11.2	0.862	1
CRIPAK	CTNNB1	0.862	1
CTNNB1	ECT2	0.862	1
CTNNB1	7q-Amp	0.862	1
Amp_19q13.11	Del_5q12.1	0.862	1
APC	Del_19p13.3	0.863	1
B2M	Del_3p14.2	0.863	1
NTAN1	NLRC4	0.863	1
NTAN1	BCORL1	0.863	1
SELPLG	DDX26B	0.863	1
SELPLG	CYSLTR2	0.863	1
SELPLG	Amp_16q12.1	0.863	1
MGA	RPTN	0.863	1
P2RY13	Del_19p13.3	0.863	1
SMAD2	NR1H3	0.863	1
SMAD2	DDX26B	0.863	1
SMAD2	Amp_16q12.1	0.863	1
NR1H3	SLC26A8	0.863	1
TPRKB	CHD3	0.863	1
RPTN	Del_5q21.1	0.863	1
THOC7	CHD3	0.863	1
THOC7	BCORL1	0.863	1
LINGO4	Amp_17q24.1	0.863	1
IQCD	BCORL1	0.863	1
HPS3	C15orf52	0.863	1
HPS3	Del_3q26.31	0.863	1
CYSLTR2	Del_19p13.3	0.863	1
Amp_16q12.1	Amp_17q12	0.863	1
Amp_20p11.21	Del_12p13.2	0.863	1
ACVR1B	CTNNB1	0.864	1
ZFP36L2	RBMX	0.864	1
ZFP36L2	L1TD1	0.864	1
ZFP36L2	FKBP9	0.864	1
ZFP36L2	IDH2	0.864	1
ZFP36L2	Del_10q21.1	0.864	1
NF2	Del_10q23.31	0.864	1
OR4D10	ATXN3L	0.864	1
OR4D10	RBMX	0.864	1
OR4D10	IDH2	0.864	1
OR4D10	Del_16p13.3	0.864	1
MVK	C2orf29	0.864	1
ATXN3L	1p-Del	0.864	1
RBMX	NAA25	0.864	1
RBMX	RLIM	0.864	1
RBMX	Del_6p25.3	0.864	1
ASXL1	Amp_6p21.1	0.864	1
ASXL1	Del_3q26.31	0.864	1
PLAGL2	Amp_8p11.21	0.864	1
CTNNB1	Del_10q23.31	0.864	1
GMPS	RLIM	0.864	1
L1TD1	1p-Del	0.864	1
C2orf29	ATP6V1B1	0.864	1
C2orf29	NAA25	0.864	1
C2orf29	Del_6p25.3	0.864	1
ATP6V1B1	FKBP9	0.864	1
ATP6V1B1	Del_16p13.3	0.864	1
NAA25	PLXNA3	0.864	1
RLIM	MAP4K3	0.864	1
RLIM	PLXNA3	0.864	1
RLIM	Del_16p13.3	0.864	1
PRPS1	8p-Del	0.864	1
PRPS1	Del_5q12.1	0.864	1
IDH2	17q-Amp	0.864	1
PLXNA3	Del_6p25.3	0.864	1
1q-Amp	22q-Del	0.864	1
8q-Amp	Del_17q24.3	0.864	1
15q-Del	Del_3q26.31	0.864	1
15q-Del	Del_6q26	0.864	1
15q-Del	Del_8q11.1	0.864	1
RHOA	PTCH1	0.865	1
ATXN3L	Del_1p33	0.865	1
CTNNB1	1p-Del	0.865	1
L1TD1	Del_1p33	0.865	1
PTCH1	C15orf52	0.865	1
CYSLTR2	7p-Amp	0.865	1
Amp_16p11.2	Del_17p12	0.865	1
BMPR2	Del_6p25.3	0.866	1
FMN2	LINGO4	0.866	1
ASXL1	PLAGL2	0.866	1
MPHOSPH10	8p-Amp	0.866	1
IDH1	SETD2	0.866	1
IDH1	8p-Amp	0.866	1
ALDH1A3	8p-Amp	0.866	1
C14orf43	8p-Amp	0.866	1
SLK	21q-Del	0.866	1
12q-Amp	Amp_17q12	0.866	1
20p-Amp	Del_5q21.1	0.866	1
8p-Amp	Del_17q24.3	0.866	1
21q-Del	Del_10q25.2	0.866	1
21q-Del	Del_16q23.1	0.866	1
4p-Del	Del_10q25.2	0.866	1
4p-Del	Del_16q23.1	0.866	1
Amp_8p11.21	Del_9p21.3	0.866	1
Amp_8p11.21	Del_19p13.3	0.866	1
APC	GRB2	0.867	1
MLH1	ZFP36L2	0.867	1
MLH1	RLIM	0.867	1
ZFP36L2	Del_15q15.2	0.867	1
BMPR2	ALG12	0.867	1
BMPR2	TMEM126A	0.867	1
TMEM126A	Amp_20p11.23	0.867	1
CRIPAK	STARD3NL	0.868	1
CRIPAK	DCLK2	0.868	1
MAPK6	STARD3NL	0.868	1
STARD3NL	ECT2	0.868	1
STARD3NL	Del_17q24.3	0.868	1
NF2	C15orf52	0.868	1
FBXW7	CTNNB1	0.868	1
MPHOSPH10	RPTN	0.868	1
IDH1	DCLK2	0.868	1
RPTN	Amp_16p11.2	0.868	1
DCLK2	C14orf43	0.868	1
DCLK2	Amp_16p11.2	0.868	1
Amp_8p11.23	Del_4q35.1	0.868	1
CDH1	ECT2	0.869	1
MLH1	EGR1	0.869	1
KDM6A	DIP2B	0.869	1
PIK3R1	5q-Del	0.869	1
NAA25	SMAD4	0.869	1
BCORL1	Del_5q22.2	0.869	1
FAM123B	B2M	0.87	1
FAM123B	DDX26B	0.87	1
ACVR1B	MAPK6	0.87	1
CRIPAK	Del_10q23.31	0.87	1
PIK3R1	KCTD3	0.87	1
PIK3R1	IDH2	0.87	1
ATM	Del_5q22.2	0.87	1
20q-Amp	Del_8q11.1	0.87	1
7p-Amp	21q-Del	0.87	1
7p-Amp	4q-Del	0.87	1
Amp_16p11.2	Del_10q23.31	0.87	1
Del_1p33	Del_10q23.31	0.87	1
SOX9	RPTN	0.871	1
SOX9	DCLK2	0.871	1
TXNDC2	PTCH1	0.871	1
CDH1	MVK	0.871	1
WNT1	PTGDR	0.871	1
WNT1	TMEM126A	0.871	1
WNT1	Del_7q31.1	0.871	1
ALG12	PTGDR	0.871	1
ALG12	TMEM126A	0.871	1
ALG12	Del_7q31.1	0.871	1
RB1	Amp_16q12.1	0.871	1
PTGDR	TMEM126A	0.871	1
PTGDR	Del_7q31.1	0.871	1
TMEM126A	Del_7q31.1	0.871	1
Amp_20q13.12	Del_7q31.1	0.871	1
APC	Del_10q25.2	0.872	1
ARID1A	TP53	0.872	1
CTNNB1	Del_8p22	0.872	1
C14orf184	22q-Del	0.872	1
IQCD	Del_21q11.2	0.872	1
PLEKHF2	Del_21q11.2	0.872	1
PLEKHF2	Del_22q13.32	0.872	1
GGT1	Del_1p13.1	0.872	1
PRPS1	Del_1p13.1	0.872	1
13q-Amp	Amp_17q24.1	0.872	1
20p-Amp	Amp_19q13.11	0.872	1
20p-Amp	Del_9p21.3	0.872	1
22q-Del	Amp_6p21.1	0.872	1
Amp_6p21.1	Amp_20p11.21	0.872	1
Amp_8p11.23	Del_5q12.1	0.872	1
Amp_17q12	Del_15q11.2	0.872	1
Amp_20q13.12	Del_3p14.2	0.872	1
Del_12p13.2	Del_21q11.2	0.872	1
Del_12p13.2	Del_22q13.32	0.872	1
TXNDC2	CYLD	0.873	1
NTAN1	12q-Amp	0.873	1
NTAN1	Del_16q23.1	0.873	1
SELPLG	Del_1p13.1	0.873	1
TPRKB	12q-Amp	0.873	1
THOC7	Del_10q25.2	0.873	1
THOC7	Del_16q23.1	0.873	1
KIAA1586	12q-Amp	0.873	1
KIAA1586	Del_10q25.2	0.873	1
LINGO4	SLK	0.873	1
LINGO4	Del_10q25.2	0.873	1
IQCD	12q-Amp	0.873	1
IQCD	Del_16q23.1	0.873	1
PLEKHF2	Del_16q23.1	0.873	1
GRB2	Amp_8p11.21	0.873	1
PCBP1	SLK	0.873	1
PCBP1	12q-Amp	0.873	1
SLK	Del_12p13.2	0.873	1
Amp_11p15.5	Amp_13q12.13	0.873	1
Del_1p13.1	Del_19p13.3	0.873	1
Del_10q25.2	Del_12p13.2	0.873	1
KDM6A	SMAD4	0.874	1
RHOA	ZBTB20	0.874	1
RHOA	1q-Amp	0.874	1
SMAD2	Amp_8p11.23	0.874	1
PLAGL2	GGT1	0.874	1
PLAGL2	Amp_17p11.2	0.874	1
CTNNB1	IQCD	0.874	1
C14orf184	GGT1	0.874	1
C14orf184	PRPS1	0.874	1
C14orf184	Amp_17p11.2	0.874	1
RLIM	Del_8p23.2	0.874	1
1q-Amp	Amp_6p21.1	0.874	1
1q-Amp	Del_3q26.31	0.874	1
1q-Amp	Del_8q11.1	0.874	1
7q-Amp	Del_1p13.1	0.874	1
1p-Del	Del_8p23.2	0.874	1
Amp_20q11.21	Del_8q11.1	0.874	1
ARID1A	MAPK6	0.875	1
TP53	ASXL1	0.875	1
TXNDC2	FBXW7	0.875	1
CRIPAK	15q-Del	0.875	1
FBXW7	ZBTB20	0.875	1
ASXL1	ALDH1A3	0.875	1
HPS3	Del_16q23.1	0.875	1
7q-Amp	Del_1p36.11	0.875	1
15q-Del	Amp_17q12	0.875	1
18p-Del	Amp_17p11.2	0.875	1
Amp_20p11.23	Del_8q11.1	0.875	1
BCOR	RBMX	0.876	1
BCOR	PLXNA3	0.876	1
BCOR	Del_16p13.3	0.876	1
CRIPAK	NF1	0.876	1
KDM6A	ATXN3L	0.876	1
KDM6A	IDH2	0.876	1
KDM6A	Del_10q21.1	0.876	1
ATXN3L	DIP2B	0.876	1
DIP2B	C2orf29	0.876	1
DIP2B	PLXNA3	0.876	1
20p-Amp	5q-Del	0.876	1
20p-Amp	Del_5q22.2	0.876	1
5q-Del	Del_15q22.33	0.876	1
Amp_19q13.11	Del_4q35.1	0.876	1
APC	Amp_8q24.21	0.877	1
ARID1A	17q-Amp	0.877	1
ARID1A	Del_6p25.3	0.877	1
FAM123B	21q-Del	0.877	1
TXNDC2	Del_18p11.31	0.877	1
RHOA	Amp_13q12.13	0.877	1
FMN2	NR1H3	0.877	1
FMN2	CYSLTR2	0.877	1
P2RY13	Amp_16q12.1	0.877	1
NR1H3	ROS1	0.877	1
NR1H3	PTCH1	0.877	1
NR1H3	CYSLTR2	0.877	1
DDX26B	CYSLTR2	0.877	1
PTCH1	CYSLTR2	0.877	1
1q-Amp	Amp_17q24.1	0.877	1
Amp_13q12.13	Del_3q26.31	0.877	1
ZFP36L2	SELPLG	0.878	1
ZFP36L2	SLC26A8	0.878	1
ZFP36L2	Del_19p13.3	0.878	1
SELPLG	GPATCH8	0.878	1
SELPLG	Del_6p25.3	0.878	1
OR4D10	SLC26A8	0.878	1
OR4D10	Amp_19q13.11	0.878	1
OR4D10	Del_19p13.3	0.878	1
MVK	Amp_19q13.11	0.878	1
SMAD2	GPATCH8	0.878	1
SMAD2	Del_6p25.3	0.878	1
GPATCH8	Amp_19q13.11	0.878	1
PIK3R1	12q-Amp	0.878	1
SLC26A8	17q-Amp	0.878	1
SLC26A8	Del_6p25.3	0.878	1
RLIM	Amp_19q13.11	0.878	1
17q-Amp	Del_9p21.3	0.878	1
17q-Amp	Del_19p13.3	0.878	1
4q-Del	Amp_8p11.23	0.878	1
Amp_5p13.2	Del_4q35.1	0.878	1
RNF43	TPRKB	0.879	1
RNF43	KIAA1586	0.879	1
RNF43	PLEKHF2	0.879	1
CDH1	PLEKHF2	0.879	1
NF2	Del_4q35.1	0.879	1
ATXN3L	Del_15q22.33	0.879	1
FBXW7	RBM44	0.879	1
FBXW7	DCLK2	0.879	1
SETD2	CHD3	0.879	1
C2orf29	Amp_12p13.33	0.879	1
GGT1	Del_1p33	0.879	1
PLXNA3	Del_5q22.2	0.879	1
8p-Amp	Amp_17q24.1	0.879	1
Amp_11p15.5	Amp_17p11.2	0.879	1
Amp_20p11.21	Del_5q21.1	0.879	1
Del_5q22.2	Del_16p13.3	0.879	1
ARID1A	ACVR1B	0.88	1
WNT1	21q-Del	0.88	1
DIP2B	Del_21q11.2	0.88	1
ALG12	Del_3p14.2	0.88	1
EGR1	PTEN	0.88	1
PTEN	CYSLTR2	0.88	1
TMEM126A	21q-Del	0.88	1
TMEM126A	4p-Del	0.88	1
TMEM126A	Del_3p14.2	0.88	1
17p-Del	Amp_17q12	0.88	1
4p-Del	Del_7q31.1	0.88	1
Amp_17q12	Del_7q31.1	0.88	1
Amp_17q24.1	Del_1p36.11	0.88	1
SELPLG	Amp_20q13.12	0.881	1
STARD3NL	ATXN3L	0.881	1
STARD3NL	RBMX	0.881	1
STARD3NL	Del_3p26.1	0.881	1
ATXN3L	RBM44	0.881	1
ATXN3L	DCLK2	0.881	1
RBMX	DCLK2	0.881	1
RPTN	GMPS	0.881	1
RPTN	C2orf29	0.881	1
RPTN	Del_3p26.1	0.881	1
RPTN	Del_10q21.1	0.881	1
RBM44	C2orf29	0.881	1
RBM44	IDH2	0.881	1
RBM44	PLXNA3	0.881	1
DCLK2	FKBP9	0.881	1
Del_5q21.1	Del_15q22.33	0.881	1
Del_9p21.3	Del_14q31.1	0.881	1
TXNDC2	NTAN1	0.882	1
TXNDC2	THOC7	0.882	1
TXNDC2	UBQLN2	0.882	1
TXNDC2	LINGO4	0.882	1
TXNDC2	IQCD	0.882	1
TXNDC2	21q-Del	0.882	1
TXNDC2	4p-Del	0.882	1
SELPLG	13q-Amp	0.882	1
TPRKB	TOP2B	0.882	1
PTEN	GMPS	0.882	1
PTEN	L1TD1	0.882	1
PTEN	IDH2	0.882	1
ALDH1A3	RB1	0.882	1
TOP2B	IQCD	0.882	1
TOP2B	PLEKHF2	0.882	1
TOP2B	21q-Del	0.882	1
LINGO4	Amp_5p13.2	0.882	1
PLEKHF2	Amp_5p13.2	0.882	1
ATM	Amp_17p11.2	0.882	1
21q-Del	Amp_5p13.2	0.882	1
4p-Del	Amp_5p13.2	0.882	1
Amp_5p13.2	Del_12p13.2	0.882	1
Amp_8q24.21	Amp_16p11.2	0.882	1
Amp_16q12.1	Del_5q12.1	0.882	1
Amp_17p11.2	Del_18p11.31	0.882	1
APC	Del_5q22.2	0.883	1
SOX9	PIK3R1	0.883	1
ACVR1B	KDM6A	0.883	1
ZFP36L2	21q-Del	0.883	1
ZFP36L2	Del_3p14.2	0.883	1
SELPLG	Amp_11p15.5	0.883	1
SELPLG	Del_1p33	0.883	1
OR4D10	4p-Del	0.883	1
MGA	C14orf184	0.883	1
MVK	21q-Del	0.883	1
C14orf184	Del_5q21.1	0.883	1
NAA25	Del_3p14.2	0.883	1
1q-Amp	Amp_8p11.21	0.883	1
1q-Amp	Del_5q21.1	0.883	1
Amp_11p15.5	Del_19p13.3	0.883	1
ARID1A	TPRKB	0.884	1
ARID1A	UBQLN2	0.884	1
ARID1A	PLEKHF2	0.884	1
TP53	Amp_6p21.1	0.884	1
CRIPAK	22q-Del	0.884	1
CRIPAK	Del_4q22.1	0.884	1
Amp_16p11.2	Del_4q22.1	0.884	1
Amp_16q12.1	Del_21q11.2	0.884	1
APC	ROS1	0.885	1
CRIPAK	RHOA	0.885	1
CRIPAK	C15orf52	0.885	1
CRIPAK	Del_3q26.31	0.885	1
RHOA	IDH1	0.885	1
RHOA	ALDH1A3	0.885	1
RHOA	C14orf43	0.885	1
MPHOSPH10	C15orf52	0.885	1
IDH1	C15orf52	0.885	1
PTEN	PTGDR	0.885	1
PTEN	1q-Amp	0.885	1
ECT2	Del_3q26.31	0.885	1
ALDH1A3	Amp_6p21.1	0.885	1
ALDH1A3	Del_6q26	0.885	1
ALDH1A3	Del_8q11.1	0.885	1
PLEKHF2	Del_4q35.1	0.885	1
BCORL1	SMAD4	0.885	1
SMAD4	Del_8p22	0.885	1
7p-Amp	Del_5q22.2	0.885	1
Amp_6p21.1	Del_17q24.3	0.885	1
Amp_8q24.21	Amp_11p15.5	0.885	1
Amp_11p15.5	Del_8p22	0.885	1
Amp_13q12.13	Del_5q12.1	0.885	1
Amp_13q22.1	Del_3q26.31	0.885	1
Amp_16p11.2	Del_3q26.31	0.885	1
Amp_16p11.2	Del_6q26	0.885	1
Del_6q26	Del_17q24.3	0.885	1
Del_8q11.1	Del_17q24.3	0.885	1
APC	RBMX	0.886	1
APC	L1TD1	0.886	1
APC	MAP4K3	0.886	1
APC	PLXNA3	0.886	1
ACVR1B	FKBP9	0.886	1
ACVR1B	MAP4K3	0.886	1
ACVR1B	Del_10q21.1	0.886	1
BCOR	Amp_17p11.2	0.886	1
ATXN3L	ATM	0.886	1
ATXN3L	Del_10q23.31	0.886	1
FBXW7	PLEKHF2	0.886	1
EGR1	NLRC4	0.886	1
EGR1	CHD3	0.886	1
THOC7	18p-Del	0.886	1
NLRC4	GRB2	0.886	1
BCL9	CYLD	0.886	1
ATM	IDH2	0.886	1
20p-Amp	Del_21q11.2	0.886	1
14q-Del	Del_5q22.2	0.886	1
22q-Del	Del_3p14.2	0.886	1
Amp_13q12.13	Del_10q25.2	0.886	1
Del_3p26.1	Del_10q23.31	0.886	1
Del_3q26.31	Del_15q11.2	0.886	1
BMPR2	STARD3NL	0.887	1
BMPR2	DCLK2	0.887	1
RHOA	MGA	0.887	1
ATXN3L	SETD2	0.887	1
ATG5	8q-Amp	0.887	1
Amp_6p21.1	Del_5q21.1	0.887	1
RNF43	CYLD	0.888	1
TP53	TXNDC2	0.888	1
SOX9	PLAGL2	0.888	1
ROS1	Del_3p14.2	0.888	1
Del_3p14.2	Del_5q12.1	0.888	1
FAM123B	PTEN	0.889	1
WNT1	C14orf184	0.889	1
ALG12	C14orf184	0.889	1
PLAGL2	TMEM126A	0.889	1
PLAGL2	Del_7q31.1	0.889	1
PTEN	Amp_8q24.21	0.889	1
C14orf184	PTGDR	0.889	1
C14orf184	TMEM126A	0.889	1
C14orf184	Del_7q31.1	0.889	1
Amp_20p11.21	Del_3p14.2	0.889	1
ASXL1	5q-Del	0.89	1
CTNNB1	L1TD1	0.89	1
8q-Amp	Del_6p25.3	0.89	1
15q-Del	5q-Del	0.89	1
RNF43	P2RY13	0.891	1
B2M	ZFP36L2	0.891	1
B2M	ATP6V1B1	0.891	1
NTAN1	CYLD	0.891	1
ZFP36L2	P2RY13	0.891	1
FMN2	HPS3	0.891	1
OR4D10	P2RY13	0.891	1
OR4D10	NR1H3	0.891	1
OR4D10	DDX26B	0.891	1
P2RY13	17q-Amp	0.891	1
NR1H3	NAA25	0.891	1
NR1H3	Del_6p25.3	0.891	1
TPRKB	C11orf30	0.891	1
TPRKB	BCL9	0.891	1
C11orf30	Del_12p13.2	0.891	1
DDX26B	Del_6p25.3	0.891	1
THOC7	CYLD	0.891	1
LINGO4	CYLD	0.891	1
BCL9	PLEKHF2	0.891	1
BCL9	PCBP1	0.891	1
IQCD	CYLD	0.891	1
RLIM	CYSLTR2	0.891	1
CYLD	Del_12p13.2	0.891	1
CYSLTR2	17q-Amp	0.891	1
CYSLTR2	Del_6p25.3	0.891	1
17q-Amp	Amp_16q12.1	0.891	1
7q-Amp	Del_21q11.2	0.891	1
Amp_20p11.21	Del_9p21.3	0.891	1
Del_4q35.1	Del_15q21.1	0.891	1
Del_15q21.1	Del_16q23.1	0.891	1
BCOR	SMAD2	0.892	1
BCOR	SLC26A8	0.892	1
BCOR	Del_19p13.3	0.892	1
SELPLG	STARD3NL	0.892	1
SELPLG	DIP2B	0.892	1
SELPLG	RPTN	0.892	1
CRIPAK	NLRC4	0.892	1
CRIPAK	CHD3	0.892	1
KDM6A	SMAD2	0.892	1
KDM6A	Del_9p21.3	0.892	1
MAPK6	CHD3	0.892	1
MAPK6	BCORL1	0.892	1
STARD3NL	SMAD2	0.892	1
STARD3NL	Del_19p13.3	0.892	1
DIP2B	Del_9p21.3	0.892	1
SMAD2	RPTN	0.892	1
SMAD2	DCLK2	0.892	1
RBM44	Amp_19q13.11	0.892	1
ECT2	NLRC4	0.892	1
ALDH1A3	NLRC4	0.892	1
ALDH1A3	CHD3	0.892	1
RB1	BCL9	0.892	1
DCLK2	SLC26A8	0.892	1
DCLK2	Amp_19q13.11	0.892	1
C14orf184	Amp_8q24.21	0.892	1
16p-Amp	1q-Amp	0.892	1
Amp_16p11.2	Amp_17q24.1	0.892	1
Amp_20q12	Del_7q31.1	0.892	1
TMEM126A	Del_5q12.1	0.893	1
8p-Amp	Del_5q12.1	0.893	1
Del_3p14.2	Del_8p23.2	0.893	1
Del_5q12.1	Del_7q31.1	0.893	1
SOX9	BMPR2	0.894	1
SOX9	RHOA	0.894	1
FAM123B	NAA25	0.894	1
MLH1	MAPK6	0.894	1
MLH1	MPHOSPH10	0.894	1
MLH1	ECT2	0.894	1
MLH1	DCLK2	0.894	1
NF1	ATG5	0.894	1
NF1	Amp_17p11.2	0.894	1
EGR1	12q-Amp	0.894	1
THOC7	Del_18p11.31	0.894	1
RB1	Del_5q22.2	0.894	1
ATM	PCBP1	0.894	1
GGT1	Del_10q23.31	0.894	1
ATG5	Del_10q23.31	0.894	1
18p-Del	Amp_8p11.23	0.894	1
Amp_17p11.2	Del_10q23.31	0.894	1
Del_1p36.11	Del_17q24.3	0.894	1
APC	NTAN1	0.895	1
APC	THOC7	0.895	1
APC	UBQLN2	0.895	1
APC	KIAA1586	0.895	1
FAM123B	NF2	0.895	1
TXNDC2	PIK3R1	0.895	1
PRKDC	16p-Amp	0.895	1
ASXL1	Del_10q21.1	0.895	1
GGT1	Del_17p12	0.895	1
15q-Del	Del_10q21.1	0.895	1
1p-Del	Amp_13q22.1	0.895	1
Amp_17p11.2	Del_17p12	0.895	1
CDH1	Del_10q21.1	0.896	1
WNT1	PRKDC	0.896	1
SELPLG	Amp_13q12.13	0.896	1
RHOA	FKBP9	0.896	1
RHOA	IDH2	0.896	1
RHOA	Del_3p26.1	0.896	1
RHOA	Del_10q21.1	0.896	1
PRKDC	TMEM126A	0.896	1
ATXN3L	Del_6q26	0.896	1
ATXN3L	Del_8q11.1	0.896	1
RBMX	Amp_6p21.1	0.896	1
GMPS	Amp_6p21.1	0.896	1
L1TD1	Del_6q26	0.896	1
C2orf29	Amp_6p21.1	0.896	1
C2orf29	Del_3q26.31	0.896	1
C2orf29	Del_6q26	0.896	1
C2orf29	Del_8q11.1	0.896	1
FKBP9	Del_3q26.31	0.896	1
PTGDR	Amp_8p11.23	0.896	1
TMEM126A	Amp_8p11.23	0.896	1
PLXNA3	Del_3q26.31	0.896	1
PLXNA3	Del_8q11.1	0.896	1
16p-Amp	Del_4q22.1	0.896	1
8q-Amp	Del_3p26.1	0.896	1
8q-Amp	Del_10q21.1	0.896	1
14q-Del	Amp_20p11.23	0.896	1
Amp_6p21.1	Del_16p13.3	0.896	1
Del_3p26.1	Del_8q11.1	0.896	1
Del_3q26.31	Del_10q21.1	0.896	1
Del_3q26.31	Del_16p13.3	0.896	1
Del_8p23.2	Del_9p21.3	0.896	1
Del_8q11.1	Del_10q21.1	0.896	1
APC	Amp_8p11.21	0.897	1
MLH1	BMPR2	0.897	1
FMN2	GRB2	0.897	1
C11orf30	Del_3p14.2	0.897	1
TMEM126A	Del_18q12.2	0.897	1
17q-Amp	Del_18q21.2	0.897	1
18p-Del	Del_6q26	0.897	1
18p-Del	Del_8q11.1	0.897	1
Amp_20p11.21	Del_1p36.11	0.897	1
Del_3p14.2	Del_17p12	0.897	1
APC	MGA	0.898	1
APC	Del_5q21.1	0.898	1
THOC7	17p-Del	0.898	1
RB1	ATG5	0.898	1
GGT1	Del_15q21.1	0.898	1
Amp_8p11.21	Amp_16q12.1	0.898	1
Amp_17p11.2	Del_15q21.1	0.898	1
B2M	Del_1p33	0.899	1
BMPR2	C14orf184	0.899	1
PTGDR	Del_1p13.1	0.899	1
TMEM126A	Del_1p13.1	0.899	1
17p-Del	Amp_11p15.5	0.899	1
Amp_5p13.2	Del_17p12	0.899	1
Del_1p13.1	Del_10q25.2	0.899	1
Del_5q22.2	Del_19p13.3	0.899	1
Del_15q22.33	Del_19p13.3	0.899	1
TXNDC2	1q-Amp	0.9	1
NTAN1	HPS3	0.9	1
ZFP36L2	FMN2	0.9	1
ZFP36L2	NF1	0.9	1
ZFP36L2	Del_5q12.1	0.9	1
SELPLG	Del_15q11.2	0.9	1
FMN2	ATP6V1B1	0.9	1
FMN2	NAA25	0.9	1
NF2	ALG12	0.9	1
NF2	PTGDR	0.9	1
NF2	TMEM126A	0.9	1
NF2	5q-Del	0.9	1
NF2	Del_7q31.1	0.9	1
NF1	17q-Amp	0.9	1
NF1	Del_6p25.3	0.9	1
PRKDC	Amp_16q12.1	0.9	1
ZBTB20	TOP2B	0.9	1
ROS1	Del_6p25.3	0.9	1
THOC7	HPS3	0.9	1
TOP2B	1q-Amp	0.9	1
IQCD	HPS3	0.9	1
PLEKHF2	HPS3	0.9	1
HPS3	PCBP1	0.9	1
20q-Amp	Del_7q31.1	0.9	1
Amp_5p13.2	Del_18q22.1	0.9	1
Amp_8p11.23	Amp_16q12.1	0.9	1
Amp_12p13.33	Amp_20p11.23	0.9	1
Del_7q31.1	Del_14q31.1	0.9	1
ZFP36L2	Amp_20p11.23	0.901	1
NF1	Amp_8q24.21	0.901	1
MGA	ALDH1A3	0.901	1
MGA	C14orf43	0.901	1
GGT1	4q-Del	0.901	1
Amp_8q24.21	Del_5q12.1	0.901	1
Amp_17q12	Del_1p13.1	0.901	1
TXNDC2	GRB2	0.902	1
ACVR1B	Amp_19q13.11	0.902	1
MAPK6	12q-Amp	0.902	1
STARD3NL	4p-Del	0.902	1
IDH1	12q-Amp	0.902	1
ALPK2	PLEKHF2	0.902	1
ALPK2	Del_12p13.2	0.902	1
EGR1	Amp_5p13.2	0.902	1
RPTN	4p-Del	0.902	1
RBM44	Del_3p14.2	0.902	1
ECT2	16p-Amp	0.902	1
TOP2B	GRB2	0.902	1
DCLK2	4p-Del	0.902	1
DCLK2	Del_3p14.2	0.902	1
PTCH1	GGT1	0.902	1
PTCH1	Amp_17p11.2	0.902	1
C14orf43	12q-Amp	0.902	1
C14orf43	Del_16q23.1	0.902	1
IQCD	Amp_12p13.33	0.902	1
IQCD	Del_5q22.2	0.902	1
GRB2	Amp_5p13.2	0.902	1
12q-Amp	Amp_16p11.2	0.902	1
16p-Amp	Del_17q24.3	0.902	1
5q-Del	Amp_16p11.2	0.902	1
Amp_8q24.21	Del_18p11.31	0.902	1
Del_4q35.1	Del_15q15.2	0.902	1
MLH1	GGT1	0.903	1
MLH1	ATG5	0.903	1
MLH1	Amp_17p11.2	0.903	1
ZFP36L2	GPATCH8	0.903	1
ZFP36L2	Del_6p25.3	0.903	1
OR4D10	MVK	0.903	1
OR4D10	RLIM	0.903	1
P2RY13	Amp_8q24.21	0.903	1
MVK	NAA25	0.903	1
RLIM	1p-Del	0.903	1
GGT1	Del_1p36.11	0.903	1
GGT1	Del_15q15.2	0.903	1
CYSLTR2	Amp_8q24.21	0.903	1
1p-Del	Del_6p25.3	0.903	1
Amp_5p13.2	Amp_12p13.33	0.903	1
Amp_8q24.21	Amp_16q12.1	0.903	1
Amp_17p11.2	Del_15q15.2	0.903	1
Amp_20q11.21	Del_7q31.1	0.903	1
TP53	SLC26A8	0.904	1
B2M	STARD3NL	0.904	1
B2M	DCLK2	0.904	1
STARD3NL	NR1H3	0.904	1
STARD3NL	DDX26B	0.904	1
STARD3NL	CYSLTR2	0.904	1
OR4D10	RB1	0.904	1
FBXW7	C11orf30	0.904	1
FBXW7	NLRC4	0.904	1
PLAGL2	C14orf184	0.904	1
RPTN	CYSLTR2	0.904	1
RBM44	DDX26B	0.904	1
RB1	NAA25	0.904	1
PTGDR	8p-Del	0.904	1
13q-Amp	Del_10q25.2	0.904	1
16p-Amp	8p-Del	0.904	1
20q-Amp	Del_12p13.2	0.904	1
15q-Del	Del_5q21.1	0.904	1
8p-Del	Del_7q31.1	0.904	1
Del_3q26.31	Del_18p11.31	0.904	1
RNF43	ACVR1B	0.905	1
SOX9	SETD2	0.905	1
KDM6A	FBXW7	0.905	1
NF2	CHD3	0.905	1
PRPS1	Amp_8q24.21	0.905	1
TMEM126A	Amp_11p15.5	0.905	1
17q-Amp	Del_18q22.1	0.905	1
15q-Del	Del_10q25.2	0.905	1
Amp_13q12.13	Del_1p36.11	0.905	1
Amp_17p11.2	Del_8p22	0.905	1
B2M	NF2	0.906	1
ZFP36L2	Del_22q13.32	0.906	1
SELPLG	8p-Amp	0.906	1
NF1	Del_10q21.1	0.906	1
ATXN3L	BCORL1	0.906	1
RBMX	NLRC4	0.906	1
SMAD2	8p-Amp	0.906	1
GMPS	BCORL1	0.906	1
NLRC4	C2orf29	0.906	1
NLRC4	KCTD3	0.906	1
NLRC4	IDH2	0.906	1
NLRC4	PLXNA3	0.906	1
C2orf29	CHD3	0.906	1
KCTD3	BCORL1	0.906	1
BCORL1	IDH2	0.906	1
IDH2	Amp_17q24.1	0.906	1
Amp_17q24.1	Del_3p26.1	0.906	1
Del_3p14.2	Del_18q22.1	0.906	1
Del_6p25.3	Del_21q11.2	0.906	1
Del_6p25.3	Del_22q13.32	0.906	1
RNF43	GRB2	0.907	1
BMPR2	RHOA	0.907	1
SELPLG	RHOA	0.907	1
RHOA	Del_9p21.3	0.907	1
SMAD2	C15orf52	0.907	1
14q-Del	Amp_16p11.2	0.907	1
8p-Del	Del_1p13.1	0.907	1
Amp_6p21.1	Del_19p13.3	0.907	1
Amp_17q12	Del_5q21.1	0.907	1
Amp_19q13.11	Del_3q26.31	0.907	1
Del_3p14.2	Del_5q21.1	0.907	1
Del_3q26.31	Del_9p21.3	0.907	1
Del_8q11.1	Del_9p21.3	0.907	1
APC	4q-Del	0.908	1
B2M	DIP2B	0.908	1
BCOR	NR1H3	0.908	1
KDM6A	P2RY13	0.908	1
KDM6A	NLRC4	0.908	1
KDM6A	CYSLTR2	0.908	1
DIP2B	CYSLTR2	0.908	1
DIP2B	BCORL1	0.908	1
TPRKB	8p-Amp	0.908	1
SETD2	LINGO4	0.908	1
UBQLN2	8p-Amp	0.908	1
NLRC4	ATG5	0.908	1
NLRC4	Amp_17p11.2	0.908	1
LINGO4	8p-Amp	0.908	1
GGT1	BCORL1	0.908	1
GGT1	Amp_17q24.1	0.908	1
ATG5	Amp_17q24.1	0.908	1
1q-Amp	Amp_8p11.23	0.908	1
TP53	Del_10q23.31	0.909	1
SOX9	MPHOSPH10	0.909	1
SOX9	IDH1	0.909	1
SOX9	C14orf43	0.909	1
NTAN1	ZBTB20	0.909	1
ZFP36L2	PTCH1	0.909	1
SELPLG	Amp_20q12	0.909	1
ZBTB20	TPRKB	0.909	1
ZBTB20	THOC7	0.909	1
PLAGL2	21q-Del	0.909	1
CTNNB1	CHD3	0.909	1
THOC7	1q-Amp	0.909	1
UBQLN2	1q-Amp	0.909	1
C14orf184	Amp_17q12	0.909	1
C14orf184	Del_3p14.2	0.909	1
IQCD	1q-Amp	0.909	1
Amp_20q12	Del_9p21.3	0.909	1
Del_1p33	Del_10q25.2	0.909	1
MAPK6	SMAD4	0.91	1
C11orf30	GRB2	0.91	1
EGR1	BCL9	0.91	1
4q-Del	Del_9p21.3	0.91	1
B2M	PIK3R1	0.911	1
BCOR	ALG12	0.911	1
BCOR	PTGDR	0.911	1
KDM6A	PTGDR	0.911	1
DIP2B	ALG12	0.911	1
DIP2B	TMEM126A	0.911	1
DIP2B	Del_7q31.1	0.911	1
ZBTB20	C11orf30	0.911	1
RB1	GMPS	0.911	1
RB1	Del_10q21.1	0.911	1
PIK3R1	CYSLTR2	0.911	1
PTGDR	Del_15q11.2	0.911	1
16p-Amp	Del_3p26.1	0.911	1
16p-Amp	Del_16p13.3	0.911	1
5q-Del	Del_3p26.1	0.911	1
5q-Del	Del_10q21.1	0.911	1
APC	Del_8p23.2	0.912	1
RNF43	RLIM	0.912	1
FAM123B	BCORL1	0.912	1
TXNDC2	CRIPAK	0.912	1
TXNDC2	MPHOSPH10	0.912	1
CRIPAK	Amp_5p13.2	0.912	1
MAPK6	Amp_5p13.2	0.912	1
ALPK2	Amp_8p11.23	0.912	1
ALDH1A3	TOP2B	0.912	1
NLRC4	8p-Del	0.912	1
C14orf43	Amp_5p13.2	0.912	1
ATM	Amp_8p11.23	0.912	1
HPS3	7p-Amp	0.912	1
GGT1	14q-Del	0.912	1
ATG5	14q-Del	0.912	1
14q-Del	Amp_17p11.2	0.912	1
21q-Del	Amp_11p15.5	0.912	1
8p-Del	Amp_17q24.1	0.912	1
Amp_20p11.23	Del_5q12.1	0.912	1
SELPLG	ASXL1	0.913	1
ASXL1	TPRKB	0.913	1
ASXL1	UBQLN2	0.913	1
ASXL1	LINGO4	0.913	1
12q-Amp	Del_4q22.1	0.913	1
7p-Amp	Del_5q12.1	0.913	1
14q-Del	Del_16q23.1	0.913	1
15q-Del	Del_19p13.3	0.913	1
22q-Del	Del_16q23.1	0.913	1
Del_4q22.1	Del_10q25.2	0.913	1
Del_5q21.1	Del_21q11.2	0.913	1
Del_5q21.1	Del_22q13.32	0.913	1
MLH1	RBMX	0.914	1
ZFP36L2	ATM	0.914	1
FBXW7	ALPK2	0.914	1
GGT1	Del_10q25.2	0.914	1
PRPS1	12q-Amp	0.914	1
PRPS1	Del_16q23.1	0.914	1
SLK	SMAD4	0.914	1
12q-Amp	Amp_17p11.2	0.914	1
16p-Amp	Del_15q11.2	0.914	1
20p-Amp	17p-Del	0.914	1
7q-Amp	Del_6p25.3	0.914	1
22q-Del	Del_5q21.1	0.914	1
5q-Del	Del_15q11.2	0.914	1
TXNDC2	MLH1	0.915	1
BCOR	PIK3R1	0.915	1
ZFP36L2	RPTN	0.915	1
ZFP36L2	RBM44	0.915	1
ZFP36L2	DCLK2	0.915	1
STARD3NL	GPATCH8	0.915	1
STARD3NL	ATP6V1B1	0.915	1
STARD3NL	NAA25	0.915	1
STARD3NL	RLIM	0.915	1
STARD3NL	1p-Del	0.915	1
OR4D10	DCLK2	0.915	1
MVK	RPTN	0.915	1
RBMX	SLK	0.915	1
RPTN	Del_6p25.3	0.915	1
L1TD1	12q-Amp	0.915	1
DCLK2	ATP6V1B1	0.915	1
DCLK2	NAA25	0.915	1
DCLK2	Del_6p25.3	0.915	1
ATG5	Amp_8p11.21	0.915	1
KCTD3	SLK	0.915	1
KCTD3	12q-Amp	0.915	1
IDH2	SLK	0.915	1
IDH2	12q-Amp	0.915	1
PLXNA3	Del_16q23.1	0.915	1
12q-Amp	Del_16p13.3	0.915	1
Amp_8p11.23	Del_5q21.1	0.915	1
Del_1p33	Del_6p25.3	0.915	1
Del_3p26.1	Del_16q23.1	0.915	1
Del_16p13.3	Del_16q23.1	0.915	1
FAM123B	RPTN	0.916	1
FAM123B	RBM44	0.916	1
RHOA	FBXW7	0.916	1
FBXW7	C15orf52	0.916	1
Amp_8p11.23	Amp_13q22.1	0.916	1
Amp_11p15.5	Del_14q31.1	0.916	1
Amp_16q12.1	Del_10q23.31	0.916	1
Amp_17q24.1	Del_5q21.1	0.916	1
Del_3p14.2	Del_15q21.1	0.916	1
TP53	Del_5q22.2	0.917	1
ACVR1B	ALG12	0.917	1
B2M	RHOA	0.917	1
NTAN1	MAPK6	0.917	1
NTAN1	MPHOSPH10	0.917	1
NTAN1	ALDH1A3	0.917	1
CRIPAK	TPRKB	0.917	1
CRIPAK	UBQLN2	0.917	1
CRIPAK	KIAA1586	0.917	1
CRIPAK	IQCD	0.917	1
MAPK6	UBQLN2	0.917	1
MAPK6	IQCD	0.917	1
MAPK6	PCBP1	0.917	1
RHOA	P2RY13	0.917	1
RHOA	NR1H3	0.917	1
RHOA	DDX26B	0.917	1
RHOA	CYSLTR2	0.917	1
MGA	C2orf29	0.917	1
MGA	KCTD3	0.917	1
P2RY13	Del_3q26.31	0.917	1
ASXL1	PIK3R1	0.917	1
NR1H3	C15orf52	0.917	1
NR1H3	Amp_6p21.1	0.917	1
NR1H3	Amp_12p13.33	0.917	1
MPHOSPH10	UBQLN2	0.917	1
MPHOSPH10	LINGO4	0.917	1
TPRKB	ECT2	0.917	1
TPRKB	ALDH1A3	0.917	1
TPRKB	Amp_8q24.21	0.917	1
IDH1	UBQLN2	0.917	1
IDH1	KIAA1586	0.917	1
IDH1	LINGO4	0.917	1
IDH1	PCBP1	0.917	1
IDH1	7q-Amp	0.917	1
ROS1	Amp_12p13.33	0.917	1
CTNNB1	8p-Del	0.917	1
ECT2	IQCD	0.917	1
THOC7	ALDH1A3	0.917	1
THOC7	Amp_16p11.2	0.917	1
THOC7	Del_17q24.3	0.917	1
UBQLN2	ALDH1A3	0.917	1
UBQLN2	C14orf43	0.917	1
ALDH1A3	IQCD	0.917	1
KIAA1586	C14orf43	0.917	1
C14orf43	IQCD	0.917	1
PLEKHF2	Amp_16p11.2	0.917	1
HPS3	GRB2	0.917	1
CYSLTR2	Del_5q22.2	0.917	1
IDH2	Del_5q21.1	0.917	1
TMEM126A	Del_10q23.31	0.917	1
PCBP1	Del_17q24.3	0.917	1
7q-Amp	Del_17q24.3	0.917	1
5q-Del	Amp_20p11.23	0.917	1
Amp_8q24.21	Del_3p26.1	0.917	1
Amp_8q24.21	Del_5q21.1	0.917	1
Amp_8q24.21	Del_10q21.1	0.917	1
Amp_8q24.21	Del_12p13.2	0.917	1
Amp_16p11.2	Del_12p13.2	0.917	1
Amp_16q12.1	Del_5q22.2	0.917	1
Amp_16q12.1	Del_6q26	0.917	1
Amp_16q12.1	Del_8q11.1	0.917	1
Del_3p26.1	Del_5q21.1	0.917	1
Del_3p26.1	Del_8p22	0.917	1
Del_5q21.1	Del_16p13.3	0.917	1
TP53	Amp_8p11.23	0.918	1
MGA	PTEN	0.918	1
17p-Del	Amp_20p11.23	0.918	1
BCOR	12q-Amp	0.919	1
BCOR	Del_16q23.1	0.919	1
MLH1	KDM6A	0.919	1
SELPLG	CHD3	0.919	1
SELPLG	BCORL1	0.919	1
FMN2	NLRC4	0.919	1
NF1	SLK	0.919	1
NF1	12q-Amp	0.919	1
DIP2B	SLK	0.919	1
DIP2B	12q-Amp	0.919	1
SMAD2	CHD3	0.919	1
PCBP1	Del_4q22.1	0.919	1
8q-Amp	Del_18p11.31	0.919	1
Amp_13q22.1	Del_1p36.11	0.919	1
Del_4q22.1	Del_9p21.3	0.919	1
FAM123B	C14orf43	0.92	1
CDH1	SELPLG	0.92	1
SELPLG	5q-Del	0.92	1
SMAD2	16p-Amp	0.92	1
C15orf52	21q-Del	0.92	1
7p-Amp	15q-Del	0.92	1
17p-Del	Amp_8p11.21	0.92	1
17p-Del	Amp_16p11.2	0.92	1
Amp_6p21.1	Amp_17q12	0.92	1
Amp_17q12	Del_3q26.31	0.92	1
Del_3p14.2	Del_8q11.1	0.92	1
APC	8q-Amp	0.921	1
APC	Del_4q35.1	0.921	1
TXNDC2	ATG5	0.921	1
TXNDC2	PRPS1	0.921	1
TXNDC2	Amp_11p15.5	0.921	1
TXNDC2	Amp_17p11.2	0.921	1
FMN2	STARD3NL	0.921	1
ZBTB20	HPS3	0.921	1
EGR1	PIK3R1	0.921	1
TOP2B	PRPS1	0.921	1
PRPS1	Amp_5p13.2	0.921	1
Amp_17p11.2	Del_18q21.2	0.921	1
Amp_20p11.23	Del_9p21.3	0.921	1
APC	Del_10q23.31	0.922	1
IDH1	CYLD	0.922	1
C11orf30	ECT2	0.922	1
C11orf30	ALDH1A3	0.922	1
C11orf30	C14orf43	0.922	1
C14orf43	BCL9	0.922	1
TMEM126A	4q-Del	0.922	1
12q-Amp	Amp_20q13.12	0.922	1
4q-Del	Del_7q31.1	0.922	1
Del_10q25.2	Del_14q31.1	0.922	1
APC	22q-Del	0.923	1
SOX9	NLRC4	0.923	1
SOX9	CHD3	0.923	1
BCOR	Del_3p14.2	0.923	1
BCOR	Del_6p25.3	0.923	1
NTAN1	Amp_8p11.23	0.923	1
ZFP36L2	Amp_8p11.23	0.923	1
BMPR2	IDH1	0.923	1
SELPLG	Amp_20q11.21	0.923	1
KDM6A	OR4D10	0.923	1
KDM6A	MVK	0.923	1
KDM6A	ALPK2	0.923	1
KDM6A	ATP6V1B1	0.923	1
KDM6A	NAA25	0.923	1
KDM6A	RLIM	0.923	1
NF2	MGA	0.923	1
PRKDC	TPRKB	0.923	1
PRKDC	LINGO4	0.923	1
PRKDC	ATP6V1B1	0.923	1
PRKDC	Del_6p25.3	0.923	1
MVK	DIP2B	0.923	1
MVK	Amp_8p11.23	0.923	1
DIP2B	1p-Del	0.923	1
DIP2B	21q-Del	0.923	1
NR1H3	SETD2	0.923	1
THOC7	Amp_8p11.23	0.923	1
PTGDR	Amp_13q12.13	0.923	1
TMEM126A	Amp_13q12.13	0.923	1
GRB2	Amp_13q12.13	0.923	1
13q-Amp	Del_5q12.1	0.923	1
20p-Amp	Del_12p13.2	0.923	1
8p-Amp	Amp_16q12.1	0.923	1
8q-Amp	Del_19p13.3	0.923	1
Amp_20q11.21	Del_9p21.3	0.923	1
SOX9	L1TD1	0.924	1
SOX9	PLXNA3	0.924	1
TXNDC2	GMPS	0.924	1
TXNDC2	MAP4K3	0.924	1
TXNDC2	IDH2	0.924	1
TXNDC2	PLXNA3	0.924	1
CRIPAK	PTEN	0.924	1
MAPK6	PTEN	0.924	1
FMN2	ATG5	0.924	1
FMN2	PRPS1	0.924	1
NF1	8q-Amp	0.924	1
RBMX	TOP2B	0.924	1
ZBTB20	Del_3p14.2	0.924	1
ROS1	PRPS1	0.924	1
PTEN	SLC26A8	0.924	1
TOP2B	GMPS	0.924	1
TOP2B	L1TD1	0.924	1
1q-Amp	Amp_17q12	0.924	1
7p-Amp	Del_15q21.1	0.924	1
18p-Del	Amp_16p11.2	0.924	1
Amp_17q12	Del_1p36.11	0.924	1
Del_1p33	Del_8p23.2	0.924	1
Del_3p14.2	Del_15q15.2	0.924	1
NTAN1	ATXN3L	0.925	1
NTAN1	GMPS	0.925	1
NTAN1	C2orf29	0.925	1
NTAN1	IDH2	0.925	1
ZFP36L2	Amp_8p11.21	0.925	1
ATXN3L	THOC7	0.925	1
ATXN3L	UBQLN2	0.925	1
ATXN3L	PLEKHF2	0.925	1
TPRKB	GMPS	0.925	1
TPRKB	L1TD1	0.925	1
TPRKB	MAP4K3	0.925	1
TPRKB	PLXNA3	0.925	1
TPRKB	Del_16p13.3	0.925	1
CTNNB1	Del_6q26	0.925	1
PTEN	ATP6V1B1	0.925	1
PTEN	NAA25	0.925	1
THOC7	GMPS	0.925	1
THOC7	L1TD1	0.925	1
THOC7	FKBP9	0.925	1
THOC7	MAP4K3	0.925	1
THOC7	PLXNA3	0.925	1
THOC7	Del_10q21.1	0.925	1
UBQLN2	GMPS	0.925	1
UBQLN2	C2orf29	0.925	1
UBQLN2	PLXNA3	0.925	1
UBQLN2	Del_10q21.1	0.925	1
GMPS	LINGO4	0.925	1
GMPS	PLEKHF2	0.925	1
GMPS	PCBP1	0.925	1
KIAA1586	IDH2	0.925	1
KIAA1586	Del_3p26.1	0.925	1
L1TD1	LINGO4	0.925	1
L1TD1	IQCD	0.925	1
L1TD1	PLEKHF2	0.925	1
C2orf29	LINGO4	0.925	1
C2orf29	PLEKHF2	0.925	1
C2orf29	PCBP1	0.925	1
LINGO4	MAP4K3	0.925	1
LINGO4	PLXNA3	0.925	1
LINGO4	Del_10q21.1	0.925	1
IQCD	FKBP9	0.925	1
IQCD	KCTD3	0.925	1
PLEKHF2	FKBP9	0.925	1
PLEKHF2	KCTD3	0.925	1
PLEKHF2	Del_10q21.1	0.925	1
KCTD3	PCBP1	0.925	1
PCBP1	Del_3p26.1	0.925	1
20p-Amp	Del_3p26.1	0.925	1
20p-Amp	Del_3p14.2	0.925	1
Amp_17q24.1	Del_21q11.2	0.925	1
Del_1p13.1	Del_8p22	0.925	1
Del_3p26.1	Del_12p13.2	0.925	1
TP53	Del_5q12.1	0.926	1
FAM123B	SLK	0.926	1
CRIPAK	ROS1	0.926	1
STARD3NL	DCLK2	0.926	1
STARD3NL	Del_22q13.32	0.926	1
IDH1	ROS1	0.926	1
ROS1	ECT2	0.926	1
RPTN	RBM44	0.926	1
C14orf184	7q-Amp	0.926	1
CYSLTR2	SMAD4	0.926	1
20p-Amp	Del_1p36.11	0.926	1
22q-Del	Amp_5p13.2	0.926	1
Amp_13q12.13	Amp_17q24.1	0.926	1
Amp_17p11.2	Del_18q22.1	0.926	1
NTAN1	NF2	0.927	1
ZFP36L2	C15orf52	0.927	1
ZFP36L2	Del_3q26.31	0.927	1
ZFP36L2	Del_6q26	0.927	1
ZFP36L2	Del_8q11.1	0.927	1
SELPLG	SLK	0.927	1
RHOA	GPATCH8	0.927	1
RHOA	NAA25	0.927	1
NF2	UBQLN2	0.927	1
NF2	LINGO4	0.927	1
NF2	IQCD	0.927	1
OR4D10	Del_3q26.31	0.927	1
PRKDC	Amp_16p11.2	0.927	1
MVK	Del_8q11.1	0.927	1
FBXW7	GRB2	0.927	1
FBXW7	SLK	0.927	1
FBXW7	Amp_8q24.21	0.927	1
FBXW7	Del_16q23.1	0.927	1
SMAD2	SLK	0.927	1
SMAD2	12q-Amp	0.927	1
SMAD2	Del_10q25.2	0.927	1
GPATCH8	C15orf52	0.927	1
C11orf30	ATG5	0.927	1
CTNNB1	12q-Amp	0.927	1
ECT2	Amp_8p11.23	0.927	1
ATP6V1B1	C15orf52	0.927	1
ATP6V1B1	Del_6q26	0.927	1
BCL9	ATG5	0.927	1
BCL9	PRPS1	0.927	1
BCL9	Amp_17p11.2	0.927	1
NAA25	C15orf52	0.927	1
SLC26A8	12q-Amp	0.927	1
SLC26A8	Del_16q23.1	0.927	1
RLIM	Amp_6p21.1	0.927	1
RLIM	Del_3q26.31	0.927	1
RLIM	Del_8q11.1	0.927	1
TMEM126A	Amp_13q22.1	0.927	1
C15orf52	Del_6p25.3	0.927	1
14q-Del	Del_6q26	0.927	1
14q-Del	Del_8q11.1	0.927	1
Amp_13q22.1	Del_7q31.1	0.927	1
Del_3q26.31	Del_8p22	0.927	1
Del_5q22.2	Del_15q21.1	0.927	1
TP53	PTCH1	0.928	1
WNT1	NLRC4	0.928	1
WNT1	CHD3	0.928	1
RHOA	PTEN	0.928	1
ALG12	NLRC4	0.928	1
NLRC4	PTGDR	0.928	1
NLRC4	TMEM126A	0.928	1
PIK3R1	Del_10q23.31	0.928	1
CHD3	PTGDR	0.928	1
CHD3	TMEM126A	0.928	1
GGT1	Del_21q11.2	0.928	1
SMAD4	4q-Del	0.928	1
Amp_17q24.1	Del_7q31.1	0.928	1
Amp_20p11.23	Del_3p14.2	0.928	1
RNF43	FAM123B	0.929	1
TP53	Del_16p13.3	0.929	1
TXNDC2	KDM6A	0.929	1
CDH1	C15orf52	0.929	1
KDM6A	TOP2B	0.929	1
NF1	RBM44	0.929	1
NF1	DCLK2	0.929	1
NF1	IQCD	0.929	1
NF1	Del_12p13.2	0.929	1
FBXW7	HPS3	0.929	1
ASXL1	NR1H3	0.929	1
ASXL1	DDX26B	0.929	1
PIK3R1	NAA25	0.929	1
C14orf184	Del_1p33	0.929	1
IQCD	Del_5q21.1	0.929	1
CYSLTR2	5q-Del	0.929	1
7p-Amp	Del_12p13.2	0.929	1
Amp_12p13.33	Amp_20p11.21	0.929	1
Amp_20p11.21	Del_5q22.2	0.929	1
Del_1p36.11	Del_15q21.1	0.929	1
ACVR1B	ZFP36L2	0.93	1
ACVR1B	ATP6V1B1	0.93	1
ACVR1B	17q-Amp	0.93	1
ZFP36L2	Del_10q23.31	0.93	1
KDM6A	SETD2	0.93	1
STARD3NL	Amp_11p15.5	0.93	1
STARD3NL	Del_1p33	0.93	1
ALG12	8q-Amp	0.93	1
EGR1	8p-Amp	0.93	1
TMEM126A	8q-Amp	0.93	1
13q-Amp	Amp_5p13.2	0.93	1
17q-Amp	Del_10q23.31	0.93	1
1p-Del	Del_10q23.31	0.93	1
RNF43	RPTN	0.931	1
RNF43	DCLK2	0.931	1
B2M	NLRC4	0.931	1
MLH1	BCL9	0.931	1
SELPLG	7p-Amp	0.931	1
CRIPAK	HPS3	0.931	1
CRIPAK	Del_22q13.32	0.931	1
P2RY13	CHD3	0.931	1
FBXW7	SETD2	0.931	1
NR1H3	NLRC4	0.931	1
NR1H3	BCORL1	0.931	1
ECT2	HPS3	0.931	1
C14orf43	HPS3	0.931	1
CHD3	CYSLTR2	0.931	1
BCORL1	Amp_16q12.1	0.931	1
1q-Amp	Amp_20q11.21	0.931	1
Amp_16p11.2	Del_18p11.31	0.931	1
Amp_16p11.2	Del_22q13.32	0.931	1
Del_1p33	Del_5q12.1	0.931	1
ARID1A	RHOA	0.932	1
RNF43	SOX9	0.932	1
RNF43	ATG5	0.932	1
RNF43	PRPS1	0.932	1
CDH1	SLK	0.932	1
MLH1	ALG12	0.932	1
NTAN1	PTEN	0.932	1
SELPLG	Del_15q15.2	0.932	1
CRIPAK	EGR1	0.932	1
NF2	IDH1	0.932	1
NF2	ECT2	0.932	1
NF2	ALDH1A3	0.932	1
NF2	Amp_16p11.2	0.932	1
ATXN3L	C11orf30	0.932	1
FBXW7	C2orf29	0.932	1
FBXW7	MAP4K3	0.932	1
FBXW7	KCTD3	0.932	1
RBMX	C11orf30	0.932	1
ASXL1	C11orf30	0.932	1
PLAGL2	Amp_8p11.23	0.932	1
C11orf30	KCTD3	0.932	1
C11orf30	IDH2	0.932	1
C11orf30	PLXNA3	0.932	1
EGR1	ECT2	0.932	1
EGR1	ALDH1A3	0.932	1
ROS1	12q-Amp	0.932	1
PTEN	UBQLN2	0.932	1
PTEN	KIAA1586	0.932	1
PTEN	LINGO4	0.932	1
ECT2	GRB2	0.932	1
ALDH1A3	GRB2	0.932	1
RB1	IQCD	0.932	1
RB1	PLEKHF2	0.932	1
GMPS	BCL9	0.932	1
C14orf43	GRB2	0.932	1
PIK3R1	Del_3p14.2	0.932	1
C14orf184	Amp_8p11.23	0.932	1
BCL9	IDH2	0.932	1
CYLD	KCTD3	0.932	1
CYLD	IDH2	0.932	1
PLXNA3	Amp_8p11.21	0.932	1
13q-Amp	Del_10q21.1	0.932	1
1p-Del	8p-Del	0.932	1
Del_1p36.11	Del_9p21.3	0.932	1
Del_1p36.11	Del_19p13.3	0.932	1
APC	Del_8q11.1	0.933	1
SOX9	UBQLN2	0.933	1
BCOR	PLAGL2	0.933	1
WNT1	Del_16q23.1	0.933	1
SELPLG	TPRKB	0.933	1
SELPLG	KIAA1586	0.933	1
SELPLG	IQCD	0.933	1
SELPLG	PLEKHF2	0.933	1
KDM6A	C14orf184	0.933	1
DIP2B	PLAGL2	0.933	1
DIP2B	C14orf184	0.933	1
SMAD2	UBQLN2	0.933	1
SMAD2	PLEKHF2	0.933	1
ALG12	Del_10q25.2	0.933	1
TPRKB	SLC26A8	0.933	1
TPRKB	Del_9p21.3	0.933	1
THOC7	Amp_19q13.11	0.933	1
KIAA1586	SMAD4	0.933	1
LINGO4	SLC26A8	0.933	1
LINGO4	SMAD4	0.933	1
LINGO4	Amp_19q13.11	0.933	1
SLC26A8	PLEKHF2	0.933	1
PLEKHF2	Del_19p13.3	0.933	1
ATM	Del_3p14.2	0.933	1
HPS3	ATG5	0.933	1
HPS3	PRPS1	0.933	1
PTGDR	SLK	0.933	1
PTGDR	Del_16q23.1	0.933	1
TMEM126A	SLK	0.933	1
PCBP1	Del_9p21.3	0.933	1
21q-Del	Amp_20q11.21	0.933	1
21q-Del	Del_10q23.31	0.933	1
Del_3p14.2	Del_10q23.31	0.933	1
Del_3p14.2	Del_18p11.31	0.933	1
Del_7q31.1	Del_16q23.1	0.933	1
Del_9p21.3	Del_12p13.2	0.933	1
Del_12p13.2	Del_19p13.3	0.933	1
ZFP36L2	Del_5q22.2	0.934	1
ZFP36L2	Del_15q22.33	0.934	1
NF1	ZBTB20	0.934	1
FBXW7	Amp_8p11.23	0.934	1
ASXL1	EGR1	0.934	1
ALPK2	RLIM	0.934	1
PIK3R1	Del_4q35.1	0.934	1
7q-Amp	Del_4q22.1	0.934	1
18q-Del	Del_16p13.3	0.934	1
Amp_11p15.5	Del_4q22.1	0.934	1
Del_5q22.2	Del_6p25.3	0.934	1
Del_10q23.31	Del_15q22.33	0.934	1
TP53	PLEKHF2	0.935	1
SOX9	12q-Amp	0.935	1
TXNDC2	SELPLG	0.935	1
TXNDC2	SMAD2	0.935	1
TXNDC2	SLC26A8	0.935	1
CDH1	PIK3R1	0.935	1
NF2	C14orf184	0.935	1
NF1	PTGDR	0.935	1
SMAD2	TOP2B	0.935	1
SMAD2	Amp_5p13.2	0.935	1
THOC7	PTCH1	0.935	1
PTCH1	LINGO4	0.935	1
PTGDR	7p-Amp	0.935	1
TMEM126A	7p-Amp	0.935	1
16p-Amp	Del_15q21.1	0.935	1
7p-Amp	Del_4q22.1	0.935	1
5q-Del	Del_15q21.1	0.935	1
Amp_5p13.2	Amp_19q13.11	0.935	1
Amp_5p13.2	Del_9p21.3	0.935	1
Del_1p36.11	Del_15q22.33	0.935	1
Del_5q22.2	Del_15q15.2	0.935	1
ARID1A	KDM6A	0.936	1
RNF43	MAPK6	0.936	1
FAM123B	FKBP9	0.936	1
FAM123B	MAP4K3	0.936	1
FAM123B	PLXNA3	0.936	1
FAM123B	C15orf52	0.936	1
BCOR	STARD3NL	0.936	1
BMPR2	RBMX	0.936	1
BMPR2	C2orf29	0.936	1
KDM6A	RPTN	0.936	1
KDM6A	RBM44	0.936	1
STARD3NL	C15orf52	0.936	1
STARD3NL	Del_4q35.1	0.936	1
STARD3NL	Del_8q11.1	0.936	1
RPTN	C15orf52	0.936	1
RBM44	Del_8q11.1	0.936	1
DCLK2	C15orf52	0.936	1
16p-Amp	Amp_17q12	0.936	1
1q-Amp	20p-Amp	0.936	1
7q-Amp	Del_16p13.3	0.936	1
4q-Del	Del_10q25.2	0.936	1
4q-Del	Del_16q23.1	0.936	1
5q-Del	Amp_17q12	0.936	1
Amp_16p11.2	Amp_17q12	0.936	1
OR4D10	16p-Amp	0.937	1
16p-Amp	17q-Amp	0.937	1
17q-Amp	Del_18q12.2	0.937	1
7p-Amp	4p-Del	0.937	1
1p-Del	Del_8p22	0.937	1
5q-Del	Del_6p25.3	0.937	1
8p-Del	Del_17q24.3	0.937	1
Amp_13q12.13	Del_10q21.1	0.937	1
Amp_16p11.2	Amp_20p11.23	0.937	1
Amp_20q12	Del_16p13.3	0.937	1
Del_1p36.11	Del_15q15.2	0.937	1
TXNDC2	ALG12	0.938	1
TXNDC2	PTGDR	0.938	1
TXNDC2	Del_7q31.1	0.938	1
ACVR1B	PRKDC	0.938	1
ACVR1B	PLAGL2	0.938	1
WNT1	Amp_5p13.2	0.938	1
BMPR2	NLRC4	0.938	1
OR4D10	FBXW7	0.938	1
MVK	FBXW7	0.938	1
FBXW7	GPATCH8	0.938	1
FBXW7	RLIM	0.938	1
RBMX	SMAD4	0.938	1
ALG12	RB1	0.938	1
ALG12	ATM	0.938	1
ALG12	Amp_5p13.2	0.938	1
NR1H3	12q-Amp	0.938	1
NR1H3	Del_16q23.1	0.938	1
EGR1	GMPS	0.938	1
DDX26B	Del_16q23.1	0.938	1
THOC7	Del_15q11.2	0.938	1
TOP2B	PTGDR	0.938	1
L1TD1	GRB2	0.938	1
C14orf184	Del_10q23.31	0.938	1
FKBP9	GRB2	0.938	1
KCTD3	SMAD4	0.938	1
IDH2	GRB2	0.938	1
12q-Amp	Amp_16q12.1	0.938	1
8q-Amp	Amp_11p15.5	0.938	1
Amp_16p11.2	Del_18q12.2	0.938	1
Amp_16q12.1	Del_16q23.1	0.938	1
Del_10q25.2	Del_21q11.2	0.938	1
Del_16q23.1	Del_21q11.2	0.938	1
APC	Del_15q11.2	0.939	1
TXNDC2	MGA	0.939	1
BCOR	C11orf30	0.939	1
BCOR	CYLD	0.939	1
ZFP36L2	8p-Amp	0.939	1
KDM6A	C11orf30	0.939	1
KDM6A	BCL9	0.939	1
MAPK6	ZBTB20	0.939	1
ZBTB20	ECT2	0.939	1
ZBTB20	PIK3R1	0.939	1
ZBTB20	GGT1	0.939	1
SETD2	ATP6V1B1	0.939	1
SETD2	RLIM	0.939	1
ATP6V1B1	8p-Amp	0.939	1
CYLD	Amp_8q24.21	0.939	1
TMEM126A	14q-Del	0.939	1
13q-Amp	Del_3q26.31	0.939	1
16p-Amp	Del_15q15.2	0.939	1
17q-Amp	8p-Amp	0.939	1
1q-Amp	Amp_17p11.2	0.939	1
8p-Amp	Del_6p25.3	0.939	1
14q-Del	Del_7q31.1	0.939	1
21q-Del	Del_5q22.2	0.939	1
5q-Del	Del_15q15.2	0.939	1
B2M	NTAN1	0.94	1
B2M	PCBP1	0.94	1
NTAN1	P2RY13	0.94	1
NTAN1	NR1H3	0.94	1
WNT1	PTCH1	0.94	1
RHOA	ROS1	0.94	1
FMN2	ATXN3L	0.94	1
FMN2	RBMX	0.94	1
FMN2	C15orf52	0.94	1
P2RY13	TPRKB	0.94	1
P2RY13	UBQLN2	0.94	1
NR1H3	IQCD	0.94	1
NR1H3	Del_12p13.2	0.94	1
TPRKB	DDX26B	0.94	1
TPRKB	Amp_16q12.1	0.94	1
ROS1	PLXNA3	0.94	1
CTNNB1	Amp_12p13.33	0.94	1
DDX26B	LINGO4	0.94	1
THOC7	Amp_16q12.1	0.94	1
UBQLN2	CYSLTR2	0.94	1
LINGO4	CYSLTR2	0.94	1
HPS3	MAP4K3	0.94	1
1p-Del	Del_15q11.2	0.94	1
CTNNB1	Amp_8p11.23	0.941	1
GRB2	7q-Amp	0.941	1
7p-Amp	Del_15q22.33	0.941	1
Amp_5p13.2	Del_18q12.2	0.941	1
Amp_20q13.12	Del_8q11.1	0.941	1
Del_3p26.1	Del_8p23.2	0.941	1
Del_8p23.2	Del_16p13.3	0.941	1
ACVR1B	RPTN	0.942	1
ACVR1B	RBM44	0.942	1
ZFP36L2	CHD3	0.942	1
BMPR2	TPRKB	0.942	1
BMPR2	IQCD	0.942	1
BMPR2	PLEKHF2	0.942	1
OR4D10	NLRC4	0.942	1
ZBTB20	PTCH1	0.942	1
CTNNB1	ATG5	0.942	1
CTNNB1	PRPS1	0.942	1
NLRC4	NAA25	0.942	1
NLRC4	RLIM	0.942	1
NLRC4	Del_6p25.3	0.942	1
BCL9	SLC26A8	0.942	1
CYLD	Amp_19q13.11	0.942	1
BCORL1	Del_6p25.3	0.942	1
1p-Del	Amp_17q24.1	0.942	1
Amp_17q24.1	Del_6p25.3	0.942	1
RNF43	8p-Amp	0.943	1
B2M	Del_15q21.1	0.943	1
ZFP36L2	15q-Del	0.943	1
RHOA	Del_1p33	0.943	1
ASXL1	NAA25	0.943	1
ASXL1	HPS3	0.943	1
ASXL1	RLIM	0.943	1
14q-Del	Del_5q21.1	0.943	1
17p-Del	Del_16p13.3	0.943	1
Amp_6p21.1	Amp_11p15.5	0.943	1
Amp_11p15.5	Del_8q11.1	0.943	1
Amp_13q22.1	Del_10q21.1	0.943	1
Del_1p33	Del_3q26.31	0.943	1
TP53	7q-Amp	0.944	1
CDH1	Amp_17p11.2	0.944	1
WNT1	BCL9	0.944	1
WNT1	CYLD	0.944	1
RHOA	Del_22q13.32	0.944	1
PRKDC	PLXNA3	0.944	1
RBMX	Amp_8p11.23	0.944	1
C11orf30	TMEM126A	0.944	1
BCL9	Del_7q31.1	0.944	1
CHD3	SLK	0.944	1
CYLD	PTGDR	0.944	1
PLXNA3	Amp_8p11.23	0.944	1
12q-Amp	Amp_17q24.1	0.944	1
1q-Amp	Del_5q22.2	0.944	1
8q-Amp	17p-Del	0.944	1
15q-Del	Del_21q11.2	0.944	1
Amp_6p21.1	Del_22q13.32	0.944	1
Amp_8p11.23	Del_16p13.3	0.944	1
Del_3p14.2	Del_15q11.2	0.944	1
Del_3q26.31	Del_21q11.2	0.944	1
TP53	MLH1	0.945	1
FAM123B	TMEM126A	0.945	1
TXNDC2	4q-Del	0.945	1
TXNDC2	Amp_16q12.1	0.945	1
ACVR1B	CDH1	0.945	1
CRIPAK	PRPS1	0.945	1
MAPK6	ATG5	0.945	1
RHOA	C15orf52	0.945	1
MGA	P2RY13	0.945	1
SMAD2	GRB2	0.945	1
MPHOSPH10	ATG5	0.945	1
MPHOSPH10	Amp_17p11.2	0.945	1
IDH1	GGT1	0.945	1
IDH1	PRPS1	0.945	1
ECT2	GGT1	0.945	1
DCLK2	16p-Amp	0.945	1
C14orf43	GGT1	0.945	1
GGT1	Amp_16p11.2	0.945	1
CYSLTR2	Del_5q21.1	0.945	1
ATG5	Amp_16p11.2	0.945	1
GRB2	Del_9p21.3	0.945	1
20q-Amp	Del_16p13.3	0.945	1
8p-Amp	Amp_17q12	0.945	1
4q-Del	Amp_5p13.2	0.945	1
Amp_8q24.21	Del_19p13.3	0.945	1
Amp_11p15.5	Amp_13q22.1	0.945	1
Amp_11p15.5	Del_21q11.2	0.945	1
Amp_16q12.1	Del_5q21.1	0.945	1
Del_1p33	Del_8p22	0.945	1
Del_3q26.31	Del_6q26	0.945	1
Del_16p13.3	Del_21q11.2	0.945	1
APC	BCL9	0.946	1
APC	CYLD	0.946	1
ACVR1B	CYLD	0.946	1
MGA	EGR1	0.946	1
P2RY13	8q-Amp	0.946	1
FBXW7	RB1	0.946	1
FBXW7	TOP2B	0.946	1
FBXW7	PIK3R1	0.946	1
TPRKB	Amp_8p11.21	0.946	1
PLAGL2	NLRC4	0.946	1
C14orf184	BCORL1	0.946	1
PRPS1	Amp_12p13.33	0.946	1
PRPS1	Del_5q22.2	0.946	1
TMEM126A	Del_17p12	0.946	1
12q-Amp	Amp_20q12	0.946	1
16p-Amp	Del_5q12.1	0.946	1
8q-Amp	Amp_16q12.1	0.946	1
18q-Del	Del_10q25.2	0.946	1
Amp_17p11.2	Del_15q22.33	0.946	1
Amp_17p11.2	Del_18q12.2	0.946	1
Del_3q26.31	Del_8p23.2	0.946	1
Del_6q26	Del_8p23.2	0.946	1
Del_7q31.1	Del_17p12	0.946	1
APC	DCLK2	0.947	1
APC	7p-Amp	0.947	1
APC	Del_15q21.1	0.947	1
ARID1A	ATG5	0.947	1
RNF43	RHOA	0.947	1
RNF43	FBXW7	0.947	1
SOX9	ATM	0.947	1
B2M	MLH1	0.947	1
MLH1	CYSLTR2	0.947	1
CRIPAK	MPHOSPH10	0.947	1
CRIPAK	ALDH1A3	0.947	1
CRIPAK	C14orf43	0.947	1
MAPK6	MPHOSPH10	0.947	1
MAPK6	Amp_16p11.2	0.947	1
STARD3NL	4q-Del	0.947	1
NF2	RBM44	0.947	1
NF2	DCLK2	0.947	1
MPHOSPH10	IDH1	0.947	1
IDH1	ALDH1A3	0.947	1
RPTN	ATM	0.947	1
ECT2	Amp_16p11.2	0.947	1
IDH2	21q-Del	0.947	1
GRB2	Amp_8p11.23	0.947	1
13q-Amp	8q-Amp	0.947	1
17p-Del	1p-Del	0.947	1
21q-Del	Del_3p26.1	0.947	1
21q-Del	Del_16p13.3	0.947	1
Amp_8p11.21	Del_5q21.1	0.947	1
Amp_17q12	Del_3p26.1	0.947	1
Del_3p14.2	Del_10q21.1	0.947	1
Del_8p22	Del_10q25.2	0.947	1
APC	FMN2	0.948	1
BCOR	RHOA	0.948	1
BCOR	HPS3	0.948	1
BCOR	Del_3q26.31	0.948	1
NTAN1	ZFP36L2	0.948	1
NTAN1	OR4D10	0.948	1
NTAN1	ATP6V1B1	0.948	1
NTAN1	RLIM	0.948	1
NTAN1	Del_6p25.3	0.948	1
ZFP36L2	TPRKB	0.948	1
ZFP36L2	KIAA1586	0.948	1
ZFP36L2	IQCD	0.948	1
ZFP36L2	12q-Amp	0.948	1
ZFP36L2	22q-Del	0.948	1
WNT1	HPS3	0.948	1
NF2	RBMX	0.948	1
NF2	MAP4K3	0.948	1
NF2	KCTD3	0.948	1
NF2	Del_10q21.1	0.948	1
OR4D10	THOC7	0.948	1
OR4D10	PLEKHF2	0.948	1
OR4D10	PCBP1	0.948	1
OR4D10	SLK	0.948	1
MVK	TPRKB	0.948	1
MVK	THOC7	0.948	1
MVK	PLEKHF2	0.948	1
ATXN3L	1q-Amp	0.948	1
DIP2B	C15orf52	0.948	1
DIP2B	Del_3q26.31	0.948	1
ALG12	HPS3	0.948	1
ZBTB20	GMPS	0.948	1
ZBTB20	L1TD1	0.948	1
TPRKB	GPATCH8	0.948	1
TPRKB	ATP6V1B1	0.948	1
TPRKB	RLIM	0.948	1
TPRKB	Del_6p25.3	0.948	1
GPATCH8	LINGO4	0.948	1
ROS1	TMEM126A	0.948	1
ROS1	Del_7q31.1	0.948	1
THOC7	NAA25	0.948	1
UBQLN2	RLIM	0.948	1
KIAA1586	ATP6V1B1	0.948	1
KIAA1586	NAA25	0.948	1
KIAA1586	RLIM	0.948	1
LINGO4	ATP6V1B1	0.948	1
LINGO4	17q-Amp	0.948	1
ATP6V1B1	IQCD	0.948	1
NAA25	SLK	0.948	1
NAA25	12q-Amp	0.948	1
NAA25	Del_16q23.1	0.948	1
IQCD	17q-Amp	0.948	1
PLEKHF2	RLIM	0.948	1
HPS3	PTGDR	0.948	1
HPS3	TMEM126A	0.948	1
HPS3	Del_7q31.1	0.948	1
PLXNA3	1q-Amp	0.948	1
PCBP1	Del_6p25.3	0.948	1
12q-Amp	17q-Amp	0.948	1
1q-Amp	Del_16p13.3	0.948	1
7p-Amp	Del_15q11.2	0.948	1
1p-Del	Del_12p13.2	0.948	1
1p-Del	Del_16q23.1	0.948	1
Amp_20q11.21	Del_16p13.3	0.948	1
Del_5q12.1	Del_10q23.31	0.948	1
Del_5q12.1	Del_17q24.3	0.948	1
Del_14q31.1	Del_16p13.3	0.948	1
RNF43	C2orf29	0.949	1
SOX9	P2RY13	0.949	1
FAM123B	SMAD2	0.949	1
TXNDC2	Del_21q11.2	0.949	1
SELPLG	HPS3	0.949	1
KDM6A	ROS1	0.949	1
ALG12	Amp_8p11.21	0.949	1
ALPK2	RPTN	0.949	1
ALPK2	DCLK2	0.949	1
RPTN	Del_5q22.2	0.949	1
DCLK2	Amp_12p13.33	0.949	1
SLC26A8	HPS3	0.949	1
Amp_5p13.2	Del_22q13.32	0.949	1
MGA	CTNNB1	0.95	1
PLAGL2	SLK	0.95	1
PLAGL2	12q-Amp	0.95	1
7q-Amp	Del_5q22.2	0.95	1
4q-Del	Amp_20p11.21	0.95	1
Amp_13q22.1	Del_5q12.1	0.95	1
Amp_20p11.23	Del_4q22.1	0.95	1
Amp_20p11.23	Del_14q31.1	0.95	1
ARID1A	TXNDC2	0.951	1
B2M	C11orf30	0.951	1
CDH1	ALDH1A3	0.951	1
MAPK6	PIK3R1	0.951	1
NF2	BCL9	0.951	1
MGA	Amp_12p13.33	0.951	1
ATXN3L	GGT1	0.951	1
RBMX	ATG5	0.951	1
NR1H3	EGR1	0.951	1
NR1H3	CYLD	0.951	1
DDX26B	GRB2	0.951	1
THOC7	4p-Del	0.951	1
GMPS	PRPS1	0.951	1
KIAA1586	Del_3p14.2	0.951	1
L1TD1	ATG5	0.951	1
L1TD1	PRPS1	0.951	1
C2orf29	PRPS1	0.951	1
LINGO4	Del_3p14.2	0.951	1
C14orf43	PIK3R1	0.951	1
BCL9	CYSLTR2	0.951	1
IQCD	21q-Del	0.951	1
IQCD	Del_3p14.2	0.951	1
PLEKHF2	21q-Del	0.951	1
FKBP9	ATG5	0.951	1
FKBP9	PRPS1	0.951	1
GGT1	IDH2	0.951	1
GGT1	Del_16p13.3	0.951	1
ATG5	MAP4K3	0.951	1
ATG5	IDH2	0.951	1
ATG5	PLXNA3	0.951	1
PRPS1	PLXNA3	0.951	1
GRB2	Amp_16q12.1	0.951	1
12q-Amp	Del_10q25.2	0.951	1
12q-Amp	Del_16q23.1	0.951	1
1q-Amp	Amp_11p15.5	0.951	1
1q-Amp	Del_1p33	0.951	1
20p-Amp	Del_19p13.3	0.951	1
18p-Del	Del_16p13.3	0.951	1
21q-Del	Amp_17q24.1	0.951	1
21q-Del	Del_12p13.2	0.951	1
5q-Del	Del_1p13.1	0.951	1
Amp_8q24.21	Del_7q31.1	0.951	1
Amp_17p11.2	Del_3p26.1	0.951	1
Del_7q31.1	Del_21q11.2	0.951	1
FAM123B	PTCH1	0.952	1
TXNDC2	BCORL1	0.952	1
B2M	NF1	0.952	1
SELPLG	7q-Amp	0.952	1
NF1	NR1H3	0.952	1
NF1	IDH1	0.952	1
NF1	ALDH1A3	0.952	1
NF1	C14orf43	0.952	1
NF1	CYSLTR2	0.952	1
NF1	8p-Amp	0.952	1
NF1	Amp_6p21.1	0.952	1
SETD2	DCLK2	0.952	1
ALPK2	SMAD4	0.952	1
ATM	Amp_16q12.1	0.952	1
7p-Amp	Amp_16p11.2	0.952	1
7p-Amp	Del_17q24.3	0.952	1
Amp_5p13.2	Del_18q21.2	0.952	1
APC	Del_1p13.1	0.953	1
ACVR1B	RHOA	0.953	1
WNT1	ZBTB20	0.953	1
DIP2B	PTEN	0.953	1
GPATCH8	SMAD4	0.953	1
RPTN	CHD3	0.953	1
ATP6V1B1	SMAD4	0.953	1
TMEM126A	1q-Amp	0.953	1
16p-Amp	Del_3q26.31	0.953	1
16p-Amp	Del_6q26	0.953	1
20p-Amp	Del_15q11.2	0.953	1
7p-Amp	Del_14q31.1	0.953	1
15q-Del	Amp_17p11.2	0.953	1
5q-Del	Amp_6p21.1	0.953	1
5q-Del	Del_3q26.31	0.953	1
Amp_8p11.23	Del_18q22.1	0.953	1
ARID1A	IDH1	0.954	1
ARID1A	ALDH1A3	0.954	1
TXNDC2	OR4D10	0.954	1
TXNDC2	PLAGL2	0.954	1
NTAN1	STARD3NL	0.954	1
NTAN1	RBM44	0.954	1
NTAN1	DCLK2	0.954	1
ZFP36L2	TOP2B	0.954	1
STARD3NL	IQCD	0.954	1
STARD3NL	PLEKHF2	0.954	1
STARD3NL	PCBP1	0.954	1
TPRKB	RBM44	0.954	1
TPRKB	DCLK2	0.954	1
PLAGL2	Amp_5p13.2	0.954	1
RPTN	KIAA1586	0.954	1
RPTN	LINGO4	0.954	1
RPTN	IQCD	0.954	1
RBM44	THOC7	0.954	1
DCLK2	PLEKHF2	0.954	1
20p-Amp	Del_10q25.2	0.954	1
7q-Amp	Amp_6p21.1	0.954	1
7q-Amp	Del_3q26.31	0.954	1
7q-Amp	Del_8q11.1	0.954	1
4q-Del	Amp_20p11.23	0.954	1
Del_1p13.1	Del_8p23.2	0.954	1
TP53	Del_15q21.1	0.955	1
MLH1	CHD3	0.955	1
CRIPAK	ATXN3L	0.955	1
CRIPAK	ALPK2	0.955	1
CRIPAK	Del_16p13.3	0.955	1
KDM6A	MGA	0.955	1
MAPK6	L1TD1	0.955	1
MAPK6	FKBP9	0.955	1
MAPK6	MAP4K3	0.955	1
MAPK6	IDH2	0.955	1
MAPK6	PLXNA3	0.955	1
ATXN3L	C14orf43	0.955	1
RBMX	MPHOSPH10	0.955	1
RBMX	ECT2	0.955	1
RBMX	C14orf43	0.955	1
SMAD2	ZBTB20	0.955	1
MPHOSPH10	GMPS	0.955	1
MPHOSPH10	L1TD1	0.955	1
MPHOSPH10	FKBP9	0.955	1
MPHOSPH10	PLXNA3	0.955	1
GPATCH8	CTNNB1	0.955	1
IDH1	ALPK2	0.955	1
IDH1	GMPS	0.955	1
IDH1	MAP4K3	0.955	1
IDH1	KCTD3	0.955	1
ECT2	MAP4K3	0.955	1
ALDH1A3	C2orf29	0.955	1
ALDH1A3	FKBP9	0.955	1
ALDH1A3	KCTD3	0.955	1
ALDH1A3	PLXNA3	0.955	1
ALDH1A3	Amp_12p13.33	0.955	1
C2orf29	C14orf43	0.955	1
12q-Amp	20q-Amp	0.955	1
1q-Amp	Amp_19q13.11	0.955	1
17p-Del	Del_1p33	0.955	1
18p-Del	Amp_11p15.5	0.955	1
5q-Del	Del_1p33	0.955	1
Amp_6p21.1	Amp_20q12	0.955	1
Amp_12p13.33	Amp_16p11.2	0.955	1
Amp_13q22.1	Del_10q25.2	0.955	1
Amp_16p11.2	Del_3p26.1	0.955	1
Amp_20q12	Del_8q11.1	0.955	1
Del_16p13.3	Del_17q24.3	0.955	1
B2M	PTEN	0.956	1
MLH1	ZBTB20	0.956	1
MLH1	UBQLN2	0.956	1
ZFP36L2	MGA	0.956	1
NF1	EGR1	0.956	1
NF1	CHD3	0.956	1
MGA	ATP6V1B1	0.956	1
MGA	Del_6p25.3	0.956	1
ASXL1	RPTN	0.956	1
ASXL1	RBM44	0.956	1
SMAD2	ATG5	0.956	1
NR1H3	PTEN	0.956	1
THOC7	Del_15q15.2	0.956	1
PTCH1	Amp_8p11.23	0.956	1
SLC26A8	GGT1	0.956	1
SLC26A8	Amp_17p11.2	0.956	1
GGT1	22q-Del	0.956	1
GGT1	Amp_19q13.11	0.956	1
PRPS1	Del_9p21.3	0.956	1
TMEM126A	Del_4q35.1	0.956	1
1q-Amp	Del_1p36.11	0.956	1
7p-Amp	Amp_17q24.1	0.956	1
1p-Del	Del_5q21.1	0.956	1
Amp_11p15.5	Del_4q35.1	0.956	1
Del_5q21.1	Del_6p25.3	0.956	1
Del_5q22.2	Del_8p23.2	0.956	1
B2M	PTCH1	0.957	1
MLH1	C14orf184	0.957	1
ZFP36L2	GRB2	0.957	1
OR4D10	GRB2	0.957	1
MGA	8p-Amp	0.957	1
GPATCH8	EGR1	0.957	1
EGR1	ATP6V1B1	0.957	1
EGR1	NAA25	0.957	1
EGR1	Del_6p25.3	0.957	1
RLIM	GRB2	0.957	1
CYLD	SMAD4	0.957	1
TMEM126A	13q-Amp	0.957	1
GRB2	1p-Del	0.957	1
12q-Amp	Amp_20q11.21	0.957	1
15q-Del	Del_4q35.1	0.957	1
21q-Del	Del_19p13.3	0.957	1
4p-Del	Del_9p21.3	0.957	1
Del_3p26.1	Del_5q12.1	0.957	1
Del_10q23.31	Del_15q11.2	0.957	1
Del_19p13.3	Del_21q11.2	0.957	1
APC	ZFP36L2	0.958	1
APC	PIK3R1	0.958	1
APC	NAA25	0.958	1
APC	17q-Amp	0.958	1
APC	Del_8p22	0.958	1
TP53	Amp_16q12.1	0.958	1
TXNDC2	Del_4q35.1	0.958	1
ACVR1B	FMN2	0.958	1
ACVR1B	ROS1	0.958	1
B2M	BMPR2	0.958	1
CDH1	OR4D10	0.958	1
CDH1	NAA25	0.958	1
CDH1	RLIM	0.958	1
WNT1	CRIPAK	0.958	1
WNT1	MAPK6	0.958	1
WNT1	ECT2	0.958	1
BMPR2	P2RY13	0.958	1
BMPR2	CYSLTR2	0.958	1
CRIPAK	ALG12	0.958	1
CRIPAK	PTGDR	0.958	1
CRIPAK	TMEM126A	0.958	1
MAPK6	ALG12	0.958	1
MAPK6	PTCH1	0.958	1
STARD3NL	SLK	0.958	1
STARD3NL	Del_10q25.2	0.958	1
PRKDC	SMAD2	0.958	1
MGA	HPS3	0.958	1
ALG12	MPHOSPH10	0.958	1
ALG12	IDH1	0.958	1
ALG12	ALDH1A3	0.958	1
MPHOSPH10	PTGDR	0.958	1
MPHOSPH10	TMEM126A	0.958	1
MPHOSPH10	Del_7q31.1	0.958	1
PLAGL2	BCL9	0.958	1
RPTN	SLK	0.958	1
ECT2	PTCH1	0.958	1
ECT2	TMEM126A	0.958	1
ECT2	Del_7q31.1	0.958	1
ALDH1A3	Del_7q31.1	0.958	1
TOP2B	12q-Amp	0.958	1
DCLK2	12q-Amp	0.958	1
C14orf43	PTGDR	0.958	1
C14orf43	Del_7q31.1	0.958	1
PIK3R1	SLK	0.958	1
TMEM126A	Amp_16p11.2	0.958	1
TMEM126A	Del_17q24.3	0.958	1
12q-Amp	Amp_5p13.2	0.958	1
12q-Amp	Del_3p14.2	0.958	1
17q-Amp	18q-Del	0.958	1
7p-Amp	Del_5q21.1	0.958	1
18q-Del	Del_8q11.1	0.958	1
4q-Del	Del_6q26	0.958	1
Amp_5p13.2	Del_16q23.1	0.958	1
Amp_8p11.23	Del_9p21.3	0.958	1
Amp_16p11.2	Del_18q21.2	0.958	1
Amp_20q13.12	Del_9p21.3	0.958	1
Del_3p14.2	Del_10q25.2	0.958	1
Del_3p14.2	Del_16q23.1	0.958	1
Del_10q21.1	Del_15q11.2	0.958	1
BCOR	NF1	0.959	1
PRKDC	HPS3	0.959	1
MVK	BCL9	0.959	1
MVK	CYLD	0.959	1
FBXW7	ROS1	0.959	1
FBXW7	GGT1	0.959	1
FBXW7	ATG5	0.959	1
FBXW7	PRPS1	0.959	1
SETD2	ECT2	0.959	1
SETD2	BCORL1	0.959	1
C11orf30	NLRC4	0.959	1
C11orf30	RLIM	0.959	1
C11orf30	BCORL1	0.959	1
NLRC4	CYLD	0.959	1
ATP6V1B1	BCL9	0.959	1
CHD3	CYLD	0.959	1
CYLD	BCORL1	0.959	1
BCORL1	8p-Amp	0.959	1
13q-Amp	Del_15q21.1	0.959	1
16p-Amp	Del_22q13.32	0.959	1
7q-Amp	4p-Del	0.959	1
5q-Del	Del_21q11.2	0.959	1
5q-Del	Del_22q13.32	0.959	1
Amp_6p21.1	Amp_20p11.23	0.959	1
Amp_20p11.21	Del_21q11.2	0.959	1
Del_5q12.1	Del_12p13.2	0.959	1
ARID1A	ATP6V1B1	0.96	1
ARID1A	NAA25	0.96	1
ARID1A	RLIM	0.96	1
SOX9	MVK	0.96	1
CDH1	CYLD	0.96	1
FMN2	MGA	0.96	1
STARD3NL	22q-Del	0.96	1
FBXW7	RPTN	0.96	1
16p-Amp	5q-Del	0.96	1
20p-Amp	4q-Del	0.96	1
1p-Del	Amp_13q12.13	0.96	1
Amp_6p21.1	Amp_8p11.23	0.96	1
Amp_8q24.21	Del_3p14.2	0.96	1
Amp_13q12.13	Del_8q11.1	0.96	1
Amp_16q12.1	Del_17p12	0.96	1
Del_3p14.2	Del_8p22	0.96	1
Del_8p23.2	Del_21q11.2	0.96	1
B2M	ATG5	0.961	1
MLH1	GPATCH8	0.961	1
MLH1	ATP6V1B1	0.961	1
WNT1	PIK3R1	0.961	1
SELPLG	MAPK6	0.961	1
SELPLG	NF2	0.961	1
SELPLG	C14orf43	0.961	1
MAPK6	SMAD2	0.961	1
RHOA	LINGO4	0.961	1
RHOA	PCBP1	0.961	1
ATXN3L	L1TD1	0.961	1
ATXN3L	IDH2	0.961	1
ATXN3L	Del_10q21.1	0.961	1
RBMX	L1TD1	0.961	1
RBMX	PIK3R1	0.961	1
RBMX	KCTD3	0.961	1
RBMX	PLXNA3	0.961	1
RBMX	Del_10q21.1	0.961	1
SMAD2	IDH1	0.961	1
SMAD2	ALDH1A3	0.961	1
SMAD2	C14orf43	0.961	1
SMAD2	Del_17q24.3	0.961	1
TPRKB	Amp_6p21.1	0.961	1
TPRKB	Del_3q26.31	0.961	1
ECT2	SLC26A8	0.961	1
DDX26B	ATG5	0.961	1
DDX26B	PRPS1	0.961	1
THOC7	Del_3q26.31	0.961	1
THOC7	Del_8q11.1	0.961	1
UBQLN2	Del_3q26.31	0.961	1
ALDH1A3	SLC26A8	0.961	1
GMPS	C2orf29	0.961	1
GMPS	KCTD3	0.961	1
KIAA1586	Amp_6p21.1	0.961	1
L1TD1	PLXNA3	0.961	1
C2orf29	FKBP9	0.961	1
C14orf43	SLC26A8	0.961	1
PIK3R1	FKBP9	0.961	1
PIK3R1	Del_7q31.1	0.961	1
PIK3R1	Del_16p13.3	0.961	1
IQCD	Del_3q26.31	0.961	1
PLEKHF2	C15orf52	0.961	1
FKBP9	PLXNA3	0.961	1
FKBP9	Del_10q21.1	0.961	1
ATG5	Amp_16q12.1	0.961	1
PRPS1	Amp_16q12.1	0.961	1
BCORL1	Amp_8p11.23	0.961	1
PCBP1	Amp_6p21.1	0.961	1
PCBP1	Del_6q26	0.961	1
7p-Amp	8p-Del	0.961	1
8q-Amp	18p-Del	0.961	1
Amp_6p21.1	Amp_12p13.33	0.961	1
Amp_6p21.1	Del_5q22.2	0.961	1
Amp_6p21.1	Del_12p13.2	0.961	1
Amp_11p15.5	Del_18p11.31	0.961	1
Amp_16p11.2	Del_9p21.3	0.961	1
Amp_16q12.1	Amp_17p11.2	0.961	1
Amp_20q13.12	Del_5q22.2	0.961	1
Del_1p36.11	Del_6p25.3	0.961	1
Del_3p26.1	Del_10q21.1	0.961	1
Del_3q26.31	Del_12p13.2	0.961	1
Del_6q26	Del_12p13.2	0.961	1
Del_8p22	Del_21q11.2	0.961	1
Del_8q11.1	Del_12p13.2	0.961	1
TXNDC2	RBM44	0.962	1
WNT1	RBMX	0.962	1
WNT1	FKBP9	0.962	1
WNT1	MAP4K3	0.962	1
WNT1	PLXNA3	0.962	1
RHOA	NF2	0.962	1
RHOA	NLRC4	0.962	1
RHOA	CHD3	0.962	1
MGA	GGT1	0.962	1
MGA	ATG5	0.962	1
MGA	PRPS1	0.962	1
ATXN3L	PTGDR	0.962	1
ATXN3L	TMEM126A	0.962	1
ATXN3L	Del_1p13.1	0.962	1
FBXW7	CYLD	0.962	1
RBMX	ALG12	0.962	1
RBMX	TMEM126A	0.962	1
RBMX	8q-Amp	0.962	1
ALG12	L1TD1	0.962	1
ALG12	FKBP9	0.962	1
PLAGL2	HPS3	0.962	1
SETD2	PIK3R1	0.962	1
ALPK2	12q-Amp	0.962	1
ALPK2	Amp_12p13.33	0.962	1
CTNNB1	GMPS	0.962	1
CTNNB1	C2orf29	0.962	1
CTNNB1	PLXNA3	0.962	1
CTNNB1	Amp_11p15.5	0.962	1
CTNNB1	Del_1p33	0.962	1
RBM44	TOP2B	0.962	1
GMPS	Del_7q31.1	0.962	1
L1TD1	PTGDR	0.962	1
L1TD1	Del_7q31.1	0.962	1
C2orf29	TMEM126A	0.962	1
C14orf184	HPS3	0.962	1
FKBP9	PTGDR	0.962	1
MAP4K3	TMEM126A	0.962	1
PRPS1	7q-Amp	0.962	1
PTGDR	IDH2	0.962	1
PTGDR	PLXNA3	0.962	1
PTGDR	Del_10q21.1	0.962	1
PTGDR	Del_16p13.3	0.962	1
BCORL1	C15orf52	0.962	1
BCORL1	Del_3q26.31	0.962	1
IDH2	Del_7q31.1	0.962	1
TMEM126A	Del_3p26.1	0.962	1
TMEM126A	Del_10q21.1	0.962	1
Amp_6p21.1	Amp_20q11.21	0.962	1
Amp_16p11.2	Del_18q22.1	0.962	1
Amp_17q24.1	Del_6q26	0.962	1
Amp_17q24.1	Del_8q11.1	0.962	1
Amp_20q11.21	Del_3q26.31	0.962	1
Del_1p13.1	Del_12p13.2	0.962	1
Del_5q12.1	Del_15q11.2	0.962	1
Del_5q22.2	Del_10q25.2	0.962	1
Del_10q25.2	Del_15q22.33	0.962	1
WNT1	ALPK2	0.963	1
WNT1	Amp_12p13.33	0.963	1
MAPK6	ASXL1	0.963	1
STARD3NL	GRB2	0.963	1
ASXL1	ECT2	0.963	1
ASXL1	C14orf43	0.963	1
ASXL1	CHD3	0.963	1
ALG12	ALPK2	0.963	1
NR1H3	1q-Amp	0.963	1
ALPK2	PTGDR	0.963	1
ALPK2	Del_7q31.1	0.963	1
EGR1	RBM44	0.963	1
EGR1	DCLK2	0.963	1
RBM44	GRB2	0.963	1
C14orf184	8q-Amp	0.963	1
TMEM126A	Del_5q22.2	0.963	1
20q-Amp	Amp_16p11.2	0.963	1
7q-Amp	Del_15q21.1	0.963	1
14q-Del	Amp_17q24.1	0.963	1
18q-Del	Amp_8p11.23	0.963	1
Amp_13q12.13	Del_17q24.3	0.963	1
Amp_13q22.1	Del_6q26	0.963	1
Amp_13q22.1	Del_8q11.1	0.963	1
Del_16p13.3	Del_18q12.2	0.963	1
SOX9	ATG5	0.964	1
B2M	ROS1	0.964	1
BCOR	MAPK6	0.964	1
BCOR	MPHOSPH10	0.964	1
CDH1	GMPS	0.964	1
CDH1	MAP4K3	0.964	1
KDM6A	C14orf43	0.964	1
FMN2	P2RY13	0.964	1
OR4D10	HPS3	0.964	1
MVK	HPS3	0.964	1
DIP2B	MPHOSPH10	0.964	1
DIP2B	ECT2	0.964	1
SETD2	Del_3q26.31	0.964	1
C11orf30	Del_16q23.1	0.964	1
ROS1	CYSLTR2	0.964	1
CTNNB1	BCORL1	0.964	1
ATP6V1B1	HPS3	0.964	1
NAA25	HPS3	0.964	1
CYLD	12q-Amp	0.964	1
1q-Amp	7q-Amp	0.964	1
20q-Amp	Amp_12p13.33	0.964	1
20q-Amp	Del_5q22.2	0.964	1
8p-Amp	Amp_6p21.1	0.964	1
8p-Del	Del_9p21.3	0.964	1
Del_1p33	Del_15q15.2	0.964	1
Del_4q35.1	Del_9p21.3	0.964	1
APC	PRKDC	0.965	1
APC	13q-Amp	0.965	1
APC	17p-Del	0.965	1
APC	Amp_8p11.23	0.965	1
TXNDC2	Del_3p14.2	0.965	1
BCOR	PTCH1	0.965	1
ATXN3L	ALPK2	0.965	1
DIP2B	Del_10q23.31	0.965	1
FBXW7	MPHOSPH10	0.965	1
FBXW7	IDH1	0.965	1
FBXW7	Amp_16p11.2	0.965	1
RBMX	ALPK2	0.965	1
ZBTB20	PLAGL2	0.965	1
PLEKHF2	Amp_11p15.5	0.965	1
HPS3	BCORL1	0.965	1
20p-Amp	4p-Del	0.965	1
18q-Del	Amp_5p13.2	0.965	1
8p-Del	Del_6q26	0.965	1
Del_10q21.1	Del_15q22.33	0.965	1
ZFP36L2	PRPS1	0.966	1
WNT1	SETD2	0.966	1
BMPR2	PIK3R1	0.966	1
RHOA	Del_10q25.2	0.966	1
OR4D10	PRPS1	0.966	1
MVK	PRPS1	0.966	1
ATXN3L	Amp_11p15.5	0.966	1
SMAD2	PTGDR	0.966	1
ALG12	SLC26A8	0.966	1
ALG12	Amp_19q13.11	0.966	1
NR1H3	Del_3p14.2	0.966	1
TPRKB	CTNNB1	0.966	1
GPATCH8	ATG5	0.966	1
SETD2	Del_7q31.1	0.966	1
CTNNB1	UBQLN2	0.966	1
CTNNB1	LINGO4	0.966	1
SLC26A8	PTGDR	0.966	1
SLC26A8	Del_7q31.1	0.966	1
RLIM	PRPS1	0.966	1
GGT1	17q-Amp	0.966	1
GGT1	1p-Del	0.966	1
CYSLTR2	Del_3p14.2	0.966	1
ATG5	17q-Amp	0.966	1
ATG5	Amp_8p11.23	0.966	1
PRPS1	Del_6p25.3	0.966	1
PTGDR	8p-Amp	0.966	1
PTGDR	Del_9p21.3	0.966	1
TMEM126A	Del_9p21.3	0.966	1
C15orf52	Del_16q23.1	0.966	1
12q-Amp	Amp_6p21.1	0.966	1
8q-Amp	Amp_12p13.33	0.966	1
8q-Amp	Amp_13q22.1	0.966	1
18p-Del	Amp_8q24.21	0.966	1
4q-Del	Amp_11p15.5	0.966	1
Amp_6p21.1	Amp_8p11.21	0.966	1
Amp_19q13.11	Del_7q31.1	0.966	1
Del_1p33	Del_16p13.3	0.966	1
Del_3q26.31	Del_10q25.2	0.966	1
Del_6q26	Del_16q23.1	0.966	1
Del_8q11.1	Del_10q25.2	0.966	1
APC	CYSLTR2	0.967	1
APC	14q-Del	0.967	1
ARID1A	KCTD3	0.967	1
SOX9	NF1	0.967	1
BMPR2	OR4D10	0.967	1
SELPLG	IDH2	0.967	1
NF1	RBMX	0.967	1
NF1	L1TD1	0.967	1
NF1	MAP4K3	0.967	1
NF1	KCTD3	0.967	1
FBXW7	Del_3p14.2	0.967	1
ASXL1	C15orf52	0.967	1
SMAD2	GMPS	0.967	1
RPTN	BCL9	0.967	1
RPTN	CYLD	0.967	1
THOC7	16p-Amp	0.967	1
DCLK2	BCL9	0.967	1
SLC26A8	PLXNA3	0.967	1
IQCD	5q-Del	0.967	1
16p-Amp	4q-Del	0.967	1
16p-Amp	Del_12p13.2	0.967	1
18q-Del	Amp_17q24.1	0.967	1
22q-Del	Amp_16p11.2	0.967	1
8p-Del	Del_21q11.2	0.967	1
Amp_8p11.23	Amp_17q12	0.967	1
Amp_12p13.33	Amp_13q12.13	0.967	1
Amp_13q22.1	Del_17q24.3	0.967	1
Amp_20q11.21	Del_22q13.32	0.967	1
Del_5q21.1	Del_14q31.1	0.967	1
Del_8p23.2	Del_10q25.2	0.967	1
Del_10q21.1	Del_19p13.3	0.967	1
Del_10q25.2	Del_18p11.31	0.967	1
TP53	PIK3R1	0.968	1
ACVR1B	MPHOSPH10	0.968	1
ACVR1B	C14orf43	0.968	1
B2M	MPHOSPH10	0.968	1
B2M	ECT2	0.968	1
B2M	ALDH1A3	0.968	1
CDH1	TPRKB	0.968	1
CDH1	IQCD	0.968	1
MAPK6	P2RY13	0.968	1
MAPK6	CYSLTR2	0.968	1
RHOA	EGR1	0.968	1
NF1	OR4D10	0.968	1
NF1	MVK	0.968	1
NF1	ATP6V1B1	0.968	1
P2RY13	MPHOSPH10	0.968	1
P2RY13	Del_17q24.3	0.968	1
FBXW7	UBQLN2	0.968	1
FBXW7	KIAA1586	0.968	1
FBXW7	LINGO4	0.968	1
FBXW7	IQCD	0.968	1
RBMX	8p-Amp	0.968	1
ASXL1	PTGDR	0.968	1
NR1H3	ALDH1A3	0.968	1
MPHOSPH10	DDX26B	0.968	1
MPHOSPH10	CYSLTR2	0.968	1
SETD2	MAP4K3	0.968	1
PTEN	GRB2	0.968	1
THOC7	Amp_20q13.12	0.968	1
GRB2	C15orf52	0.968	1
GRB2	Amp_6p21.1	0.968	1
GRB2	Del_3q26.31	0.968	1
20q-Amp	21q-Del	0.968	1
7p-Amp	Del_6p25.3	0.968	1
Amp_8p11.23	Del_18q21.2	0.968	1
Amp_8p11.21	Del_5q22.2	0.968	1
Amp_17p11.2	Del_14q31.1	0.968	1
Del_1p13.1	Del_3p14.2	0.968	1
Del_5q12.1	Del_16q23.1	0.968	1
Del_10q23.31	Del_17q24.3	0.968	1
ARID1A	WNT1	0.969	1
ARID1A	ALG12	0.969	1
ARID1A	PTGDR	0.969	1
ARID1A	TMEM126A	0.969	1
ACVR1B	FBXW7	0.969	1
BCOR	UBQLN2	0.969	1
NTAN1	KDM6A	0.969	1
NTAN1	DIP2B	0.969	1
CRIPAK	PLAGL2	0.969	1
KDM6A	UBQLN2	0.969	1
KDM6A	KIAA1586	0.969	1
KDM6A	PLEKHF2	0.969	1
FMN2	THOC7	0.969	1
FMN2	KIAA1586	0.969	1
FMN2	PLEKHF2	0.969	1
FMN2	Del_12p13.2	0.969	1
DIP2B	THOC7	0.969	1
DIP2B	UBQLN2	0.969	1
DIP2B	LINGO4	0.969	1
RBMX	RB1	0.969	1
TPRKB	ROS1	0.969	1
PLAGL2	ALDH1A3	0.969	1
IDH1	C14orf184	0.969	1
ALPK2	TOP2B	0.969	1
ROS1	PLEKHF2	0.969	1
CTNNB1	RBM44	0.969	1
CTNNB1	DCLK2	0.969	1
ALDH1A3	C14orf184	0.969	1
RB1	KCTD3	0.969	1
RB1	PLXNA3	0.969	1
PIK3R1	SMAD4	0.969	1
PIK3R1	16p-Amp	0.969	1
TMEM126A	Del_18q21.2	0.969	1
16p-Amp	7q-Amp	0.969	1
7q-Amp	5q-Del	0.969	1
7q-Amp	Del_15q15.2	0.969	1
Amp_13q22.1	Del_21q11.2	0.969	1
Amp_17q12	Del_18p11.31	0.969	1
Del_1p33	Del_15q22.33	0.969	1
Del_6q26	Del_15q11.2	0.969	1
Del_15q11.2	Del_19p13.3	0.969	1
APC	NLRC4	0.97	1
APC	Amp_17q24.1	0.97	1
ARID1A	KIAA1586	0.97	1
ARID1A	PTCH1	0.97	1
ARID1A	LINGO4	0.97	1
SOX9	RB1	0.97	1
ACVR1B	NF1	0.97	1
B2M	FBXW7	0.97	1
B2M	PTGDR	0.97	1
BCOR	L1TD1	0.97	1
ZFP36L2	RB1	0.97	1
WNT1	P2RY13	0.97	1
WNT1	NR1H3	0.97	1
KDM6A	RBMX	0.97	1
KDM6A	FKBP9	0.97	1
KDM6A	MAP4K3	0.97	1
KDM6A	KCTD3	0.97	1
RHOA	22q-Del	0.97	1
STARD3NL	ATG5	0.97	1
STARD3NL	PRPS1	0.97	1
P2RY13	FBXW7	0.97	1
P2RY13	ALG12	0.97	1
P2RY13	Del_7q31.1	0.97	1
DIP2B	IDH2	0.97	1
DIP2B	Del_10q21.1	0.97	1
ASXL1	Del_16q23.1	0.97	1
ALG12	NR1H3	0.97	1
ALG12	DDX26B	0.97	1
ALG12	CYSLTR2	0.97	1
RPTN	PRPS1	0.97	1
RBM44	PRPS1	0.97	1
TOP2B	C15orf52	0.97	1
DCLK2	GGT1	0.97	1
DCLK2	PRPS1	0.97	1
LINGO4	ATM	0.97	1
IQCD	ATM	0.97	1
PLEKHF2	ATM	0.97	1
CYSLTR2	PTGDR	0.97	1
CYSLTR2	TMEM126A	0.97	1
CYSLTR2	Del_7q31.1	0.97	1
TMEM126A	Amp_16q12.1	0.97	1
16p-Amp	7p-Amp	0.97	1
7p-Amp	5q-Del	0.97	1
22q-Del	Del_8q11.1	0.97	1
8p-Del	Amp_11p15.5	0.97	1
8p-Del	Amp_17p11.2	0.97	1
Amp_13q22.1	Del_15q21.1	0.97	1
Amp_20p11.23	Del_7q31.1	0.97	1
Del_5q22.2	Del_21q11.2	0.97	1
APC	RB1	0.971	1
TP53	NF2	0.971	1
TP53	Del_3q26.31	0.971	1
TP53	Del_8q11.1	0.971	1
TP53	Del_9p21.3	0.971	1
TP53	Del_19p13.3	0.971	1
FAM123B	Del_6p25.3	0.971	1
BCOR	PRKDC	0.971	1
KDM6A	PIK3R1	0.971	1
ATXN3L	PTCH1	0.971	1
ZBTB20	NLRC4	0.971	1
L1TD1	PTCH1	0.971	1
PTCH1	NAA25	0.971	1
PTCH1	RLIM	0.971	1
PTCH1	PLXNA3	0.971	1
ATM	GGT1	0.971	1
GGT1	Del_18p11.31	0.971	1
TMEM126A	Del_18q22.1	0.971	1
1q-Amp	Amp_20q12	0.971	1
14q-Del	Amp_11p15.5	0.971	1
8p-Del	Amp_13q22.1	0.971	1
8p-Del	Del_5q21.1	0.971	1
Amp_8p11.23	Del_18q12.2	0.971	1
Amp_11p15.5	Amp_20p11.21	0.971	1
Del_15q21.1	Del_21q11.2	0.971	1
APC	Amp_20p11.23	0.972	1
TP53	Del_5q21.1	0.972	1
ACVR1B	NTAN1	0.972	1
ACVR1B	KIAA1586	0.972	1
ACVR1B	PCBP1	0.972	1
ACVR1B	Del_12p13.2	0.972	1
MLH1	TOP2B	0.972	1
NTAN1	UBQLN2	0.972	1
NTAN1	LINGO4	0.972	1
NTAN1	PLEKHF2	0.972	1
CRIPAK	4q-Del	0.972	1
STARD3NL	SMAD4	0.972	1
NF2	Amp_16q12.1	0.972	1
NF1	Amp_12p13.33	0.972	1
NF1	Del_5q22.2	0.972	1
P2RY13	IDH2	0.972	1
P2RY13	PLXNA3	0.972	1
P2RY13	Del_10q21.1	0.972	1
ATXN3L	PLAGL2	0.972	1
ATXN3L	CYSLTR2	0.972	1
SMAD2	Del_19p13.3	0.972	1
NR1H3	L1TD1	0.972	1
NR1H3	FKBP9	0.972	1
NR1H3	Del_10q21.1	0.972	1
TPRKB	THOC7	0.972	1
TPRKB	UBQLN2	0.972	1
TPRKB	KIAA1586	0.972	1
TPRKB	IQCD	0.972	1
DDX26B	FKBP9	0.972	1
DDX26B	KCTD3	0.972	1
DDX26B	IDH2	0.972	1
THOC7	UBQLN2	0.972	1
THOC7	IQCD	0.972	1
UBQLN2	KIAA1586	0.972	1
UBQLN2	LINGO4	0.972	1
GMPS	CYSLTR2	0.972	1
KIAA1586	PLEKHF2	0.972	1
KIAA1586	PCBP1	0.972	1
KIAA1586	Del_12p13.2	0.972	1
C2orf29	C14orf184	0.972	1
C14orf184	IDH2	0.972	1
ATM	RLIM	0.972	1
CYSLTR2	Del_16p13.3	0.972	1
13q-Amp	Amp_12p13.33	0.972	1
16p-Amp	Amp_12p13.33	0.972	1
16p-Amp	Del_15q22.33	0.972	1
14q-Del	Del_17q24.3	0.972	1
4q-Del	Amp_16p11.2	0.972	1
Amp_12p13.33	Amp_13q22.1	0.972	1
Amp_20p11.21	Del_4q22.1	0.972	1
Amp_20q13.12	Del_10q21.1	0.972	1
Amp_20q13.12	Del_16p13.3	0.972	1
Del_1p13.1	Del_16q23.1	0.972	1
Del_5q12.1	Del_21q11.2	0.972	1
Del_5q12.1	Del_22q13.32	0.972	1
Del_9p21.3	Del_19p13.3	0.972	1
Del_10q21.1	Del_15q21.1	0.972	1
APC	4p-Del	0.973	1
ARID1A	DCLK2	0.973	1
RNF43	IQCD	0.973	1
MLH1	ALPK2	0.973	1
ZFP36L2	MPHOSPH10	0.973	1
SELPLG	Del_15q22.33	0.973	1
CRIPAK	Del_5q21.1	0.973	1
MAPK6	MVK	0.973	1
OR4D10	MPHOSPH10	0.973	1
MGA	ECT2	0.973	1
MVK	IDH1	0.973	1
MVK	ECT2	0.973	1
SMAD2	CTNNB1	0.973	1
SMAD2	Amp_11p15.5	0.973	1
MPHOSPH10	ATP6V1B1	0.973	1
MPHOSPH10	NAA25	0.973	1
GPATCH8	ALDH1A3	0.973	1
SETD2	TOP2B	0.973	1
CTNNB1	SLK	0.973	1
PTEN	Amp_8p11.21	0.973	1
ECT2	NAA25	0.973	1
ECT2	RLIM	0.973	1
PTCH1	SLK	0.973	1
PIK3R1	CYLD	0.973	1
C14orf184	Amp_8p11.21	0.973	1
ATP6V1B1	Del_3p14.2	0.973	1
GGT1	Del_15q11.2	0.973	1
12q-Amp	16p-Amp	0.973	1
17q-Amp	Amp_16p11.2	0.973	1
7q-Amp	Amp_5p13.2	0.973	1
7q-Amp	Amp_16p11.2	0.973	1
8p-Amp	Amp_5p13.2	0.973	1
1p-Del	Amp_17q12	0.973	1
1p-Del	Del_3p14.2	0.973	1
21q-Del	Del_6p25.3	0.973	1
Amp_8p11.21	Amp_17q24.1	0.973	1
Amp_11p15.5	Amp_19q13.11	0.973	1
Amp_13q12.13	Del_1p33	0.973	1
Amp_17p11.2	Del_15q11.2	0.973	1
Amp_17q12	Del_1p33	0.973	1
Amp_20p11.21	Del_5q12.1	0.973	1
Del_3p14.2	Del_6p25.3	0.973	1
Del_4q22.1	Del_16q23.1	0.973	1
Del_6p25.3	Del_17q24.3	0.973	1
APC	SELPLG	0.974	1
APC	Amp_19q13.11	0.974	1
ACVR1B	GMPS	0.974	1
ACVR1B	IDH2	0.974	1
ZFP36L2	WNT1	0.974	1
ZFP36L2	ROS1	0.974	1
ZFP36L2	TMEM126A	0.974	1
WNT1	ATP6V1B1	0.974	1
WNT1	RLIM	0.974	1
KDM6A	NF2	0.974	1
RHOA	BCL9	0.974	1
FMN2	GPATCH8	0.974	1
OR4D10	PTGDR	0.974	1
MGA	Del_7q31.1	0.974	1
MVK	ALG12	0.974	1
ATXN3L	22q-Del	0.974	1
C11orf30	CYLD	0.974	1
ROS1	ATP6V1B1	0.974	1
TOP2B	HPS3	0.974	1
NAA25	Del_7q31.1	0.974	1
RLIM	PTGDR	0.974	1
GGT1	Amp_17q12	0.974	1
GGT1	Del_3p14.2	0.974	1
PTGDR	1p-Del	0.974	1
TMEM126A	Del_6p25.3	0.974	1
13q-Amp	Del_21q11.2	0.974	1
17q-Amp	Del_7q31.1	0.974	1
20q-Amp	Del_5q12.1	0.974	1
8p-Amp	5q-Del	0.974	1
Del_9p21.3	Del_18p11.31	0.974	1
Del_18p11.31	Del_19p13.3	0.974	1
APC	Amp_20p11.21	0.975	1
BCOR	CHD3	0.975	1
MLH1	C2orf29	0.975	1
MLH1	FKBP9	0.975	1
MLH1	PLXNA3	0.975	1
SELPLG	C14orf184	0.975	1
KDM6A	CHD3	0.975	1
RHOA	PRPS1	0.975	1
SMAD2	C14orf184	0.975	1
ZBTB20	RPTN	0.975	1
ZBTB20	Del_16q23.1	0.975	1
THOC7	Amp_20q12	0.975	1
C14orf184	ATM	0.975	1
12q-Amp	1q-Amp	0.975	1
1q-Amp	20q-Amp	0.975	1
1q-Amp	Del_10q25.2	0.975	1
20q-Amp	Del_9p21.3	0.975	1
20q-Amp	Del_19p13.3	0.975	1
17p-Del	Amp_8q24.21	0.975	1
17p-Del	Amp_16q12.1	0.975	1
17p-Del	Del_3p14.2	0.975	1
21q-Del	Amp_20p11.21	0.975	1
4p-Del	Amp_20p11.21	0.975	1
4q-Del	Del_12p13.2	0.975	1
8p-Del	Del_10q25.2	0.975	1
Del_1p36.11	Del_3p26.1	0.975	1
Del_4q35.1	Del_12p13.2	0.975	1
Del_10q21.1	Del_15q15.2	0.975	1
TP53	PRPS1	0.976	1
SOX9	MAPK6	0.976	1
SOX9	Del_7q31.1	0.976	1
TXNDC2	ASXL1	0.976	1
TXNDC2	SMAD4	0.976	1
B2M	SMAD4	0.976	1
MAPK6	ATM	0.976	1
NF2	ASXL1	0.976	1
P2RY13	SMAD4	0.976	1
DIP2B	SMAD2	0.976	1
NR1H3	SMAD4	0.976	1
ALPK2	CYLD	0.976	1
DDX26B	SMAD4	0.976	1
ALDH1A3	BCORL1	0.976	1
CYLD	Amp_12p13.33	0.976	1
PRPS1	7p-Amp	0.976	1
13q-Amp	Del_1p13.1	0.976	1
16p-Amp	15q-Del	0.976	1
18p-Del	Amp_5p13.2	0.976	1
Amp_11p15.5	Del_10q25.2	0.976	1
Amp_20q11.21	Del_19p13.3	0.976	1
Del_1p33	Del_16q23.1	0.976	1
Del_3q26.31	Del_17p12	0.976	1
APC	SMAD4	0.977	1
SOX9	BCORL1	0.977	1
FAM123B	CRIPAK	0.977	1
FAM123B	MPHOSPH10	0.977	1
TXNDC2	NF1	0.977	1
B2M	SMAD2	0.977	1
NTAN1	CHD3	0.977	1
ZFP36L2	ATXN3L	0.977	1
ZFP36L2	PTEN	0.977	1
ZFP36L2	GMPS	0.977	1
ZFP36L2	MAP4K3	0.977	1
ZFP36L2	PLXNA3	0.977	1
WNT1	PTEN	0.977	1
SELPLG	NR1H3	0.977	1
STARD3NL	PTGDR	0.977	1
STARD3NL	TMEM126A	0.977	1
STARD3NL	Del_7q31.1	0.977	1
OR4D10	L1TD1	0.977	1
OR4D10	MAP4K3	0.977	1
OR4D10	KCTD3	0.977	1
PRKDC	ALDH1A3	0.977	1
P2RY13	PIK3R1	0.977	1
P2RY13	SLC26A8	0.977	1
MVK	PTEN	0.977	1
MVK	FKBP9	0.977	1
ATXN3L	GPATCH8	0.977	1
ATXN3L	ATP6V1B1	0.977	1
ATXN3L	NAA25	0.977	1
ATXN3L	RLIM	0.977	1
ATXN3L	Del_6p25.3	0.977	1
DIP2B	GRB2	0.977	1
DIP2B	Del_3p14.2	0.977	1
FBXW7	FKBP9	0.977	1
FBXW7	PLXNA3	0.977	1
RBMX	ATP6V1B1	0.977	1
ALG12	RPTN	0.977	1
ALG12	PTEN	0.977	1
ALG12	RBM44	0.977	1
NR1H3	PIK3R1	0.977	1
TPRKB	NLRC4	0.977	1
TPRKB	BCORL1	0.977	1
PLAGL2	Del_5q22.2	0.977	1
GPATCH8	PTEN	0.977	1
GPATCH8	L1TD1	0.977	1
GPATCH8	FKBP9	0.977	1
GPATCH8	MAP4K3	0.977	1
PTEN	RLIM	0.977	1
RBM44	PTGDR	0.977	1
RBM44	Del_7q31.1	0.977	1
DDX26B	SLC26A8	0.977	1
UBQLN2	NLRC4	0.977	1
GMPS	ATP6V1B1	0.977	1
KIAA1586	NLRC4	0.977	1
KIAA1586	CHD3	0.977	1
KIAA1586	BCORL1	0.977	1
L1TD1	Del_6p25.3	0.977	1
NLRC4	PLEKHF2	0.977	1
DCLK2	Del_7q31.1	0.977	1
C2orf29	RLIM	0.977	1
LINGO4	CHD3	0.977	1
ATP6V1B1	KCTD3	0.977	1
SLC26A8	CYSLTR2	0.977	1
CHD3	PLEKHF2	0.977	1
FKBP9	Del_6p25.3	0.977	1
RLIM	KCTD3	0.977	1
MAP4K3	Del_6p25.3	0.977	1
7p-Amp	Amp_5p13.2	0.977	1
14q-Del	Del_3p14.2	0.977	1
1p-Del	Del_10q21.1	0.977	1
1p-Del	Del_16p13.3	0.977	1
Amp_13q22.1	Del_1p33	0.977	1
Amp_16q12.1	Del_8p23.2	0.977	1
Amp_16q12.1	Del_9p21.3	0.977	1
Amp_16q12.1	Del_19p13.3	0.977	1
Amp_17q12	Del_8p23.2	0.977	1
Amp_17q24.1	Del_18q12.2	0.977	1
Amp_20p11.21	Del_10q21.1	0.977	1
Del_6p25.3	Del_10q21.1	0.977	1
Del_6p25.3	Del_16p13.3	0.977	1
Del_16p13.3	Del_18q21.2	0.977	1
APC	Del_22q13.32	0.978	1
ARID1A	SLK	0.978	1
ARID1A	Del_16q23.1	0.978	1
TXNDC2	ZBTB20	0.978	1
NTAN1	GRB2	0.978	1
SELPLG	15q-Del	0.978	1
STARD3NL	MPHOSPH10	0.978	1
STARD3NL	C14orf43	0.978	1
P2RY13	PLAGL2	0.978	1
NR1H3	Amp_11p15.5	0.978	1
MPHOSPH10	RBM44	0.978	1
MPHOSPH10	DCLK2	0.978	1
TPRKB	GRB2	0.978	1
EGR1	UBQLN2	0.978	1
EGR1	LINGO4	0.978	1
EGR1	PLEKHF2	0.978	1
RPTN	ECT2	0.978	1
RBM44	ECT2	0.978	1
RBM44	ALDH1A3	0.978	1
RBM44	C14orf43	0.978	1
THOC7	GRB2	0.978	1
THOC7	20q-Amp	0.978	1
ALDH1A3	DCLK2	0.978	1
LINGO4	GRB2	0.978	1
BCL9	HPS3	0.978	1
HPS3	CYLD	0.978	1
PTGDR	7q-Amp	0.978	1
16p-Amp	22q-Del	0.978	1
8q-Amp	Del_5q21.1	0.978	1
22q-Del	5q-Del	0.978	1
Amp_8p11.21	Del_5q12.1	0.978	1
Del_4q35.1	Del_15q22.33	0.978	1
APC	ATXN3L	0.979	1
APC	GMPS	0.979	1
APC	Del_3p26.1	0.979	1
APC	Del_10q21.1	0.979	1
FAM123B	STARD3NL	0.979	1
TXNDC2	ATM	0.979	1
ACVR1B	SLC26A8	0.979	1
ACVR1B	CHD3	0.979	1
B2M	ALPK2	0.979	1
BCOR	SLK	0.979	1
CRIPAK	FMN2	0.979	1
CRIPAK	Del_10q25.2	0.979	1
FMN2	MPHOSPH10	0.979	1
FMN2	IDH1	0.979	1
NF2	MPHOSPH10	0.979	1
PRKDC	MVK	0.979	1
MGA	12q-Amp	0.979	1
P2RY13	Del_5q22.2	0.979	1
ATXN3L	SMAD4	0.979	1
DIP2B	Del_16q23.1	0.979	1
NR1H3	ALPK2	0.979	1
MPHOSPH10	SLK	0.979	1
MPHOSPH10	12q-Amp	0.979	1
PLAGL2	8p-Amp	0.979	1
THOC7	Amp_20q11.21	0.979	1
ALDH1A3	12q-Amp	0.979	1
KIAA1586	PIK3R1	0.979	1
PIK3R1	PLEKHF2	0.979	1
PIK3R1	HPS3	0.979	1
C14orf184	8p-Amp	0.979	1
GGT1	16p-Amp	0.979	1
GGT1	Del_8p22	0.979	1
ATG5	16p-Amp	0.979	1
PRPS1	5q-Del	0.979	1
PLXNA3	SMAD4	0.979	1
16p-Amp	Amp_17p11.2	0.979	1
7q-Amp	4q-Del	0.979	1
7q-Amp	Del_15q22.33	0.979	1
5q-Del	Amp_20p11.21	0.979	1
Amp_5p13.2	Del_18p11.31	0.979	1
Amp_8q24.21	Amp_17p11.2	0.979	1
Amp_11p15.5	Del_18q21.2	0.979	1
Amp_12p13.33	Amp_16q12.1	0.979	1
Amp_13q12.13	Del_16p13.3	0.979	1
Amp_20p11.21	Del_10q25.2	0.979	1
Amp_20q12	Del_5q22.2	0.979	1
Del_5q21.1	Del_10q21.1	0.979	1
Del_5q21.1	Del_10q25.2	0.979	1
Del_6q26	Del_15q21.1	0.979	1
Del_8q11.1	Del_15q21.1	0.979	1
Del_14q31.1	Del_17q24.3	0.979	1
Del_16p13.3	Del_18q22.1	0.979	1
TP53	C2orf29	0.98	1
TP53	Del_1p33	0.98	1
SOX9	MGA	0.98	1
BCOR	ASXL1	0.98	1
MLH1	RHOA	0.98	1
NTAN1	SLK	0.98	1
WNT1	FBXW7	0.98	1
BMPR2	PTGDR	0.98	1
KDM6A	ASXL1	0.98	1
ATXN3L	CHD3	0.98	1
FBXW7	ALG12	0.98	1
RBMX	CHD3	0.98	1
RBMX	BCORL1	0.98	1
TPRKB	ALPK2	0.98	1
TPRKB	SLK	0.98	1
ALPK2	LINGO4	0.98	1
CTNNB1	Del_8q11.1	0.98	1
THOC7	Del_15q22.33	0.98	1
UBQLN2	Del_16q23.1	0.98	1
KIAA1586	Amp_12p13.33	0.98	1
L1TD1	Amp_17q24.1	0.98	1
NLRC4	MAP4K3	0.98	1
20p-Amp	Amp_17p11.2	0.98	1
4q-Del	Del_15q21.1	0.98	1
5q-Del	Amp_13q12.13	0.98	1
Amp_6p21.1	Amp_8q24.21	0.98	1
Del_1p36.11	Del_6q26	0.98	1
Del_6q26	Del_8p22	0.98	1
Del_10q23.31	Del_14q31.1	0.98	1
Del_10q25.2	Del_15q11.2	0.98	1
APC	Amp_13q22.1	0.981	1
TP53	Del_4q35.1	0.981	1
B2M	BCOR	0.981	1
B2M	NR1H3	0.981	1
B2M	SETD2	0.981	1
B2M	CYSLTR2	0.981	1
CDH1	EGR1	0.981	1
CDH1	GRB2	0.981	1
MLH1	SELPLG	0.981	1
ZFP36L2	PLAGL2	0.981	1
ZFP36L2	C14orf184	0.981	1
WNT1	RHOA	0.981	1
WNT1	C15orf52	0.981	1
BMPR2	ECT2	0.981	1
SELPLG	NAA25	0.981	1
SELPLG	17q-Amp	0.981	1
KDM6A	DDX26B	0.981	1
RHOA	ALG12	0.981	1
RHOA	TMEM126A	0.981	1
RHOA	Del_7q31.1	0.981	1
NF2	MVK	0.981	1
NF2	RLIM	0.981	1
OR4D10	SMAD2	0.981	1
PRKDC	PTGDR	0.981	1
P2RY13	SETD2	0.981	1
P2RY13	CYSLTR2	0.981	1
MVK	PLAGL2	0.981	1
MVK	C14orf184	0.981	1
ASXL1	ATM	0.981	1
ALG12	Amp_8p11.23	0.981	1
ALG12	Del_3q26.31	0.981	1
ALG12	Del_8q11.1	0.981	1
PLAGL2	ATP6V1B1	0.981	1
PLAGL2	RLIM	0.981	1
GPATCH8	SLC26A8	0.981	1
SETD2	CYSLTR2	0.981	1
ROS1	RPTN	0.981	1
RBM44	RB1	0.981	1
C14orf184	Del_6p25.3	0.981	1
ATP6V1B1	SLC26A8	0.981	1
NAA25	SLC26A8	0.981	1
TMEM126A	C15orf52	0.981	1
TMEM126A	Amp_6p21.1	0.981	1
TMEM126A	Del_6q26	0.981	1
TMEM126A	Del_8q11.1	0.981	1
17q-Amp	Del_14q31.1	0.981	1
7q-Amp	17p-Del	0.981	1
8p-Del	Amp_5p13.2	0.981	1
Amp_13q22.1	Del_3p26.1	0.981	1
Amp_20q12	Del_10q21.1	0.981	1
Amp_20q13.12	Del_17q24.3	0.981	1
Del_5q22.2	Del_8p22	0.981	1
Del_6p25.3	Del_19p13.3	0.981	1
APC	ATM	0.982	1
FAM123B	DIP2B	0.982	1
TXNDC2	ECT2	0.982	1
TXNDC2	C14orf43	0.982	1
TXNDC2	Del_12p13.2	0.982	1
ACVR1B	12q-Amp	0.982	1
MLH1	PRPS1	0.982	1
NTAN1	ATG5	0.982	1
NTAN1	8p-Amp	0.982	1
ZFP36L2	FBXW7	0.982	1
WNT1	NF2	0.982	1
STARD3NL	GMPS	0.982	1
STARD3NL	C2orf29	0.982	1
STARD3NL	FKBP9	0.982	1
STARD3NL	KCTD3	0.982	1
STARD3NL	PLXNA3	0.982	1
STARD3NL	Del_10q21.1	0.982	1
ATXN3L	RPTN	0.982	1
FBXW7	ATP6V1B1	0.982	1
RBMX	RPTN	0.982	1
MPHOSPH10	TOP2B	0.982	1
TPRKB	SETD2	0.982	1
TPRKB	GGT1	0.982	1
TPRKB	PRPS1	0.982	1
IDH1	TOP2B	0.982	1
SETD2	PCBP1	0.982	1
RPTN	FKBP9	0.982	1
RPTN	KCTD3	0.982	1
PTEN	SLK	0.982	1
ECT2	TOP2B	0.982	1
THOC7	GGT1	0.982	1
THOC7	8p-Amp	0.982	1
UBQLN2	TOP2B	0.982	1
UBQLN2	ATG5	0.982	1
UBQLN2	PRPS1	0.982	1
TOP2B	KIAA1586	0.982	1
TOP2B	C14orf43	0.982	1
GMPS	DCLK2	0.982	1
KIAA1586	GGT1	0.982	1
L1TD1	DCLK2	0.982	1
DCLK2	PLXNA3	0.982	1
LINGO4	GGT1	0.982	1
LINGO4	PRPS1	0.982	1
LINGO4	Amp_17p11.2	0.982	1
IQCD	ATG5	0.982	1
IQCD	Amp_5p13.2	0.982	1
IQCD	Amp_17p11.2	0.982	1
PLEKHF2	ATG5	0.982	1
PLEKHF2	PRPS1	0.982	1
GGT1	Amp_8p11.21	0.982	1
TMEM126A	Del_14q31.1	0.982	1
13q-Amp	Amp_17p11.2	0.982	1
17q-Amp	8p-Del	0.982	1
1q-Amp	Amp_13q22.1	0.982	1
20p-Amp	Del_4q35.1	0.982	1
7q-Amp	Del_5q21.1	0.982	1
8q-Amp	Del_5q12.1	0.982	1
4q-Del	Del_15q15.2	0.982	1
Amp_8p11.21	Amp_17p11.2	0.982	1
Amp_11p15.5	Del_18q22.1	0.982	1
Amp_13q12.13	Del_21q11.2	0.982	1
APC	TP53	0.983	1
APC	MPHOSPH10	0.983	1
APC	CTNNB1	0.983	1
APC	ALDH1A3	0.983	1
RNF43	CRIPAK	0.983	1
TP53	21q-Del	0.983	1
TP53	4q-Del	0.983	1
FAM123B	L1TD1	0.983	1
FAM123B	C2orf29	0.983	1
TXNDC2	ROS1	0.983	1
ACVR1B	DDX26B	0.983	1
ACVR1B	CYSLTR2	0.983	1
BCOR	TOP2B	0.983	1
CDH1	C14orf184	0.983	1
MAPK6	RHOA	0.983	1
MAPK6	C15orf52	0.983	1
MAPK6	Amp_6p21.1	0.983	1
RHOA	MPHOSPH10	0.983	1
NF1	KIAA1586	0.983	1
PRKDC	UBQLN2	0.983	1
FBXW7	SMAD4	0.983	1
ASXL1	IQCD	0.983	1
TPRKB	Amp_8p11.23	0.983	1
GPATCH8	PIK3R1	0.983	1
EGR1	BCORL1	0.983	1
CTNNB1	C14orf184	0.983	1
ECT2	C15orf52	0.983	1
THOC7	15q-Del	0.983	1
ALDH1A3	C15orf52	0.983	1
C2orf29	12q-Amp	0.983	1
C14orf43	C15orf52	0.983	1
FKBP9	SLK	0.983	1
CYLD	Amp_8p11.23	0.983	1
TMEM126A	17p-Del	0.983	1
TMEM126A	8p-Del	0.983	1
PLXNA3	SLK	0.983	1
13q-Amp	Del_8q11.1	0.983	1
7q-Amp	Del_15q11.2	0.983	1
14q-Del	Del_3q26.31	0.983	1
17p-Del	Del_7q31.1	0.983	1
21q-Del	Del_7q31.1	0.983	1
Amp_8p11.23	Amp_13q12.13	0.983	1
Amp_11p15.5	Del_1p13.1	0.983	1
Amp_12p13.33	Amp_20q13.12	0.983	1
Amp_17q12	Del_8p22	0.983	1
Del_3p26.1	Del_10q25.2	0.983	1
Del_3q26.31	Del_17q24.3	0.983	1
APC	KDM6A	0.984	1
APC	Amp_20q13.12	0.984	1
APC	Del_14q31.1	0.984	1
RNF43	STARD3NL	0.984	1
FAM123B	MGA	0.984	1
FAM123B	ATM	0.984	1
ACVR1B	ASXL1	0.984	1
B2M	MVK	0.984	1
B2M	GPATCH8	0.984	1
BCOR	FMN2	0.984	1
BCOR	PRPS1	0.984	1
NTAN1	RB1	0.984	1
ZFP36L2	NR1H3	0.984	1
ZFP36L2	DDX26B	0.984	1
SELPLG	NLRC4	0.984	1
KDM6A	ATG5	0.984	1
FMN2	DIP2B	0.984	1
FMN2	GMPS	0.984	1
FMN2	L1TD1	0.984	1
STARD3NL	PLAGL2	0.984	1
NF2	KIAA1586	0.984	1
NF2	PLEKHF2	0.984	1
PRKDC	GMPS	0.984	1
PRKDC	IDH2	0.984	1
MGA	SMAD2	0.984	1
MGA	PLAGL2	0.984	1
P2RY13	ATP6V1B1	0.984	1
P2RY13	Del_6p25.3	0.984	1
MVK	NR1H3	0.984	1
MVK	CYSLTR2	0.984	1
SMAD2	RBM44	0.984	1
NR1H3	ATP6V1B1	0.984	1
ZBTB20	PTEN	0.984	1
PLAGL2	RPTN	0.984	1
GPATCH8	CYSLTR2	0.984	1
C11orf30	UBQLN2	0.984	1
C11orf30	LINGO4	0.984	1
C11orf30	IQCD	0.984	1
ROS1	FKBP9	0.984	1
ROS1	MAP4K3	0.984	1
ROS1	IDH2	0.984	1
RPTN	SLC26A8	0.984	1
DDX26B	RLIM	0.984	1
UBQLN2	BCL9	0.984	1
LINGO4	BCL9	0.984	1
ATP6V1B1	CYSLTR2	0.984	1
IQCD	SMAD4	0.984	1
PLEKHF2	CYLD	0.984	1
GGT1	Del_8p23.2	0.984	1
PRPS1	SMAD4	0.984	1
TMEM126A	16p-Amp	0.984	1
20q-Amp	Del_10q21.1	0.984	1
7q-Amp	Del_4q35.1	0.984	1
15q-Del	21q-Del	0.984	1
21q-Del	Amp_20q12	0.984	1
Amp_17p11.2	Del_8p23.2	0.984	1
Amp_17q24.1	Del_9p21.3	0.984	1
Del_1p33	Del_5q21.1	0.984	1
Del_5q21.1	Del_19p13.3	0.984	1
APC	Del_17p12	0.985	1
ARID1A	NR1H3	0.985	1
TP53	Amp_8p11.21	0.985	1
TP53	Del_1p13.1	0.985	1
BCOR	MVK	0.985	1
CDH1	MPHOSPH10	0.985	1
ZFP36L2	KDM6A	0.985	1
BMPR2	ATXN3L	0.985	1
MAPK6	BCL9	0.985	1
RHOA	ATXN3L	0.985	1
NF2	GMPS	0.985	1
NF2	CYLD	0.985	1
NF2	IDH2	0.985	1
NF2	PLXNA3	0.985	1
NF1	ECT2	0.985	1
OR4D10	DIP2B	0.985	1
OR4D10	ALPK2	0.985	1
ATXN3L	Del_3q26.31	0.985	1
DIP2B	RLIM	0.985	1
FBXW7	CHD3	0.985	1
FBXW7	BCORL1	0.985	1
PLAGL2	SMAD4	0.985	1
IDH1	C11orf30	0.985	1
IDH1	BCL9	0.985	1
EGR1	Del_16q23.1	0.985	1
ALDH1A3	CYLD	0.985	1
L1TD1	C15orf52	0.985	1
PTCH1	IQCD	0.985	1
C14orf43	CYLD	0.985	1
FKBP9	C15orf52	0.985	1
KCTD3	C15orf52	0.985	1
IDH2	C15orf52	0.985	1
GRB2	Del_16q23.1	0.985	1
PLXNA3	C15orf52	0.985	1
1q-Amp	Amp_12p13.33	0.985	1
20q-Amp	Del_5q21.1	0.985	1
7p-Amp	Del_15q15.2	0.985	1
7q-Amp	Amp_17q24.1	0.985	1
8q-Amp	Del_5q22.2	0.985	1
14q-Del	Del_5q12.1	0.985	1
1p-Del	Amp_20q11.21	0.985	1
1p-Del	Del_5q22.2	0.985	1
21q-Del	Del_3p14.2	0.985	1
21q-Del	Del_3q26.31	0.985	1
21q-Del	Del_6q26	0.985	1
4p-Del	Del_6q26	0.985	1
Amp_6p21.1	Del_3p14.2	0.985	1
Amp_8p11.21	Amp_17q12	0.985	1
Amp_8p11.21	Del_17p12	0.985	1
Amp_20q11.21	Del_3p26.1	0.985	1
Amp_20q11.21	Del_5q22.2	0.985	1
Amp_20q11.21	Del_10q21.1	0.985	1
Del_1p33	Del_18p11.31	0.985	1
Del_3p26.1	Del_6q26	0.985	1
Del_3p14.2	Del_6q26	0.985	1
Del_3p14.2	Del_17q24.3	0.985	1
Del_4q22.1	Del_12p13.2	0.985	1
Del_4q35.1	Del_10q25.2	0.985	1
Del_8q11.1	Del_16p13.3	0.985	1
APC	20p-Amp	0.986	1
APC	Amp_13q12.13	0.986	1
TP53	Del_17q24.3	0.986	1
FAM123B	C11orf30	0.986	1
FAM123B	ATG5	0.986	1
TXNDC2	FKBP9	0.986	1
BCOR	BCL9	0.986	1
MLH1	BCORL1	0.986	1
BMPR2	SLK	0.986	1
CRIPAK	RB1	0.986	1
RHOA	PLAGL2	0.986	1
NF1	P2RY13	0.986	1
NF1	Amp_16q12.1	0.986	1
OR4D10	SETD2	0.986	1
PRKDC	RPTN	0.986	1
PRKDC	DCLK2	0.986	1
MVK	SETD2	0.986	1
MVK	8p-Amp	0.986	1
ATXN3L	PTEN	0.986	1
ATXN3L	TOP2B	0.986	1
ATXN3L	Del_22q13.32	0.986	1
DIP2B	RB1	0.986	1
DIP2B	BCL9	0.986	1
PLAGL2	C15orf52	0.986	1
GPATCH8	SETD2	0.986	1
SETD2	NAA25	0.986	1
C11orf30	CTNNB1	0.986	1
EGR1	PRPS1	0.986	1
CTNNB1	BCL9	0.986	1
PTEN	FKBP9	0.986	1
PTEN	MAP4K3	0.986	1
UBQLN2	HPS3	0.986	1
RB1	C14orf43	0.986	1
RB1	CHD3	0.986	1
C14orf184	Amp_6p21.1	0.986	1
C14orf184	Del_3q26.31	0.986	1
C14orf184	Del_6q26	0.986	1
ATM	CYSLTR2	0.986	1
ATM	PLXNA3	0.986	1
HPS3	Del_12p13.2	0.986	1
GGT1	GRB2	0.986	1
ATG5	GRB2	0.986	1
13q-Amp	Amp_8q24.21	0.986	1
20p-Amp	Amp_16p11.2	0.986	1
20q-Amp	Del_1p13.1	0.986	1
7q-Amp	15q-Del	0.986	1
18q-Del	Amp_8p11.21	0.986	1
4q-Del	Amp_16q12.1	0.986	1
Amp_20p11.21	Del_7q31.1	0.986	1
Amp_20q13.12	Del_5q21.1	0.986	1
Del_10q21.1	Del_21q11.2	0.986	1
Del_10q25.2	Del_19p13.3	0.986	1
Del_16p13.3	Del_22q13.32	0.986	1
ARID1A	CRIPAK	0.987	1
ARID1A	FMN2	0.987	1
ARID1A	MPHOSPH10	0.987	1
ARID1A	ECT2	0.987	1
RNF43	NF2	0.987	1
RNF43	ATXN3L	0.987	1
RNF43	DIP2B	0.987	1
RNF43	RBMX	0.987	1
RNF43	IDH2	0.987	1
TP53	1p-Del	0.987	1
FAM123B	SLC26A8	0.987	1
TXNDC2	EGR1	0.987	1
ACVR1B	OR4D10	0.987	1
ACVR1B	MVK	0.987	1
ACVR1B	NAA25	0.987	1
B2M	RB1	0.987	1
CDH1	C11orf30	0.987	1
MLH1	P2RY13	0.987	1
ZFP36L2	SMAD4	0.987	1
WNT1	UBQLN2	0.987	1
CRIPAK	PTCH1	0.987	1
FMN2	CYLD	0.987	1
STARD3NL	P2RY13	0.987	1
OR4D10	NAA25	0.987	1
P2RY13	PTEN	0.987	1
P2RY13	RBM44	0.987	1
ALG12	TPRKB	0.987	1
ALG12	THOC7	0.987	1
ALG12	UBQLN2	0.987	1
ALG12	LINGO4	0.987	1
ALG12	IQCD	0.987	1
ALG12	PLEKHF2	0.987	1
NR1H3	RPTN	0.987	1
ZBTB20	SETD2	0.987	1
ZBTB20	8p-Amp	0.987	1
MPHOSPH10	HPS3	0.987	1
TPRKB	PTGDR	0.987	1
ALPK2	GRB2	0.987	1
C11orf30	PTCH1	0.987	1
ROS1	C15orf52	0.987	1
RPTN	DDX26B	0.987	1
PTEN	DDX26B	0.987	1
RBM44	CYSLTR2	0.987	1
THOC7	PTGDR	0.987	1
KIAA1586	PTGDR	0.987	1
KIAA1586	Del_7q31.1	0.987	1
DCLK2	Amp_16q12.1	0.987	1
LINGO4	PTGDR	0.987	1
GRB2	Del_5q22.2	0.987	1
12q-Amp	8q-Amp	0.987	1
13q-Amp	Del_9p21.3	0.987	1
13q-Amp	Del_19p13.3	0.987	1
1q-Amp	8p-Amp	0.987	1
20p-Amp	Del_4q22.1	0.987	1
20q-Amp	5q-Del	0.987	1
7q-Amp	Amp_19q13.11	0.987	1
7q-Amp	Del_9p21.3	0.987	1
8q-Amp	Amp_6p21.1	0.987	1
8q-Amp	Del_3q26.31	0.987	1
18p-Del	Del_10q25.2	0.987	1
21q-Del	Del_4q22.1	0.987	1
5q-Del	Del_1p36.11	0.987	1
5q-Del	Del_17q24.3	0.987	1
Amp_11p15.5	Del_8p23.2	0.987	1
Amp_20q11.21	Del_5q21.1	0.987	1
Del_1p33	Del_15q21.1	0.987	1
Del_3p14.2	Del_21q11.2	0.987	1
TP53	Del_15q15.2	0.988	1
B2M	MGA	0.988	1
B2M	BCORL1	0.988	1
MLH1	FMN2	0.988	1
MLH1	PIK3R1	0.988	1
SELPLG	TOP2B	0.988	1
SELPLG	SMAD4	0.988	1
MGA	ASXL1	0.988	1
MGA	KIAA1586	0.988	1
P2RY13	NLRC4	0.988	1
ATXN3L	BCL9	0.988	1
ASXL1	GPATCH8	0.988	1
ASXL1	SMAD4	0.988	1
NR1H3	CHD3	0.988	1
ZBTB20	KIAA1586	0.988	1
ZBTB20	IQCD	0.988	1
TPRKB	1q-Amp	0.988	1
SETD2	EGR1	0.988	1
SETD2	GRB2	0.988	1
C11orf30	L1TD1	0.988	1
PTEN	Amp_8p11.23	0.988	1
RBM44	PIK3R1	0.988	1
DDX26B	CHD3	0.988	1
GMPS	CYLD	0.988	1
L1TD1	CYLD	0.988	1
NLRC4	CYSLTR2	0.988	1
BCL9	PLXNA3	0.988	1
SLC26A8	C15orf52	0.988	1
CHD3	ATG5	0.988	1
CYLD	MAP4K3	0.988	1
GGT1	Del_22q13.32	0.988	1
ATG5	BCORL1	0.988	1
PRPS1	BCORL1	0.988	1
PTGDR	Del_1p33	0.988	1
GRB2	8p-Amp	0.988	1
13q-Amp	Del_15q22.33	0.988	1
13q-Amp	Del_17q24.3	0.988	1
17q-Amp	Del_8p23.2	0.988	1
1q-Amp	Amp_20q13.12	0.988	1
1q-Amp	Del_12p13.2	0.988	1
7p-Amp	Del_3q26.31	0.988	1
8p-Amp	Amp_20q12	0.988	1
18q-Del	Amp_16p11.2	0.988	1
Amp_5p13.2	Del_19p13.3	0.988	1
Amp_6p21.1	Amp_20q13.12	0.988	1
Amp_8p11.21	Del_12p13.2	0.988	1
Amp_13q22.1	Del_15q22.33	0.988	1
Amp_16p11.2	Amp_20q12	0.988	1
Amp_19q13.11	Amp_20p11.21	0.988	1
Amp_19q13.11	Del_8q11.1	0.988	1
Amp_20q12	Del_17q24.3	0.988	1
Del_1p36.11	Del_15q11.2	0.988	1
Del_3q26.31	Del_5q12.1	0.988	1
Del_3q26.31	Del_22q13.32	0.988	1
Del_5q21.1	Del_15q21.1	0.988	1
Del_8q11.1	Del_22q13.32	0.988	1
ARID1A	CYLD	0.989	1
RNF43	CTNNB1	0.989	1
RNF43	PIK3R1	0.989	1
TP53	Amp_20p11.23	0.989	1
TP53	Del_21q11.2	0.989	1
SOX9	C11orf30	0.989	1
SOX9	IQCD	0.989	1
FAM123B	PRKDC	0.989	1
B2M	SLK	0.989	1
BCOR	WNT1	0.989	1
BCOR	RBM44	0.989	1
BCOR	TMEM126A	0.989	1
ZFP36L2	STARD3NL	0.989	1
WNT1	KDM6A	0.989	1
WNT1	NF1	0.989	1
SELPLG	PRKDC	0.989	1
SELPLG	ROS1	0.989	1
KDM6A	ALG12	0.989	1
STARD3NL	MVK	0.989	1
STARD3NL	Del_6p25.3	0.989	1
NF1	ALG12	0.989	1
OR4D10	RPTN	0.989	1
OR4D10	RBM44	0.989	1
P2RY13	SLK	0.989	1
MVK	CTNNB1	0.989	1
DIP2B	DCLK2	0.989	1
DIP2B	HPS3	0.989	1
FBXW7	ECT2	0.989	1
RBMX	CTNNB1	0.989	1
ALG12	EGR1	0.989	1
GPATCH8	RPTN	0.989	1
GPATCH8	DCLK2	0.989	1
ALPK2	ECT2	0.989	1
ALPK2	ALDH1A3	0.989	1
C11orf30	EGR1	0.989	1
RPTN	ATP6V1B1	0.989	1
CTNNB1	FKBP9	0.989	1
PTEN	ATG5	0.989	1
RBM44	ATP6V1B1	0.989	1
DDX26B	SLK	0.989	1
RB1	PTGDR	0.989	1
RB1	TMEM126A	0.989	1
DCLK2	RLIM	0.989	1
GGT1	Amp_17p11.2	0.989	1
16p-Amp	17p-Del	0.989	1
16p-Amp	Del_17p12	0.989	1
1q-Amp	Amp_20p11.23	0.989	1
20p-Amp	Amp_5p13.2	0.989	1
7p-Amp	Del_4q35.1	0.989	1
14q-Del	5q-Del	0.989	1
14q-Del	Amp_16q12.1	0.989	1
14q-Del	Del_4q22.1	0.989	1
21q-Del	Del_10q21.1	0.989	1
21q-Del	Del_15q21.1	0.989	1
4p-Del	Del_16p13.3	0.989	1
5q-Del	Del_16p13.3	0.989	1
Amp_11p15.5	Del_17p12	0.989	1
Amp_13q12.13	Del_19p13.3	0.989	1
Amp_17q24.1	Del_14q31.1	0.989	1
Del_1p13.1	Del_3q26.31	0.989	1
Del_5q22.2	Del_17q24.3	0.989	1
Del_10q23.31	Del_21q11.2	0.989	1
Del_15q22.33	Del_21q11.2	0.989	1
APC	HPS3	0.99	1
ARID1A	ZFP36L2	0.99	1
RNF43	C11orf30	0.99	1
FAM123B	ASXL1	0.99	1
TXNDC2	NLRC4	0.99	1
ACVR1B	WNT1	0.99	1
ACVR1B	STARD3NL	0.99	1
ACVR1B	MGA	0.99	1
ACVR1B	Amp_11p15.5	0.99	1
ACVR1B	Del_7q31.1	0.99	1
BCOR	ATM	0.99	1
CDH1	FBXW7	0.99	1
CDH1	FKBP9	0.99	1
CDH1	GGT1	0.99	1
CDH1	KCTD3	0.99	1
MLH1	PTGDR	0.99	1
NTAN1	C14orf43	0.99	1
NTAN1	C14orf184	0.99	1
ZFP36L2	NLRC4	0.99	1
ZFP36L2	BCORL1	0.99	1
CRIPAK	LINGO4	0.99	1
CRIPAK	1q-Amp	0.99	1
CRIPAK	Del_12p13.2	0.99	1
MAPK6	SETD2	0.99	1
MAPK6	LINGO4	0.99	1
STARD3NL	Del_10q23.31	0.99	1
NF1	FBXW7	0.99	1
NF1	HPS3	0.99	1
PRKDC	PLAGL2	0.99	1
PRKDC	C14orf184	0.99	1
PRKDC	GRB2	0.99	1
MGA	FBXW7	0.99	1
MVK	CHD3	0.99	1
ASXL1	BCORL1	0.99	1
SMAD2	C11orf30	0.99	1
SMAD2	BCL9	0.99	1
ZBTB20	MPHOSPH10	0.99	1
MPHOSPH10	PCBP1	0.99	1
TPRKB	C14orf43	0.99	1
PLAGL2	UBQLN2	0.99	1
PLAGL2	LINGO4	0.99	1
SETD2	C14orf43	0.99	1
ALPK2	SLK	0.99	1
C11orf30	SLC26A8	0.99	1
EGR1	HPS3	0.99	1
PTEN	NLRC4	0.99	1
PTEN	DCLK2	0.99	1
PTEN	CHD3	0.99	1
PTEN	BCORL1	0.99	1
ECT2	LINGO4	0.99	1
ALDH1A3	PLEKHF2	0.99	1
TOP2B	CHD3	0.99	1
GMPS	HPS3	0.99	1
L1TD1	HPS3	0.99	1
PTCH1	PTGDR	0.99	1
C14orf43	PLEKHF2	0.99	1
ATP6V1B1	CHD3	0.99	1
SLC26A8	CYLD	0.99	1
ATM	PTGDR	0.99	1
ATM	TMEM126A	0.99	1
HPS3	KCTD3	0.99	1
GGT1	12q-Amp	0.99	1
CYSLTR2	Amp_6p21.1	0.99	1
CYSLTR2	Del_3q26.31	0.99	1
13q-Amp	Del_4q22.1	0.99	1
16p-Amp	Del_8p22	0.99	1
20q-Amp	Del_17q24.3	0.99	1
7p-Amp	Del_3p14.2	0.99	1
8p-Amp	Amp_20q13.12	0.99	1
18q-Del	Del_6q26	0.99	1
21q-Del	Amp_20q13.12	0.99	1
21q-Del	Del_14q31.1	0.99	1
21q-Del	Del_15q15.2	0.99	1
5q-Del	Amp_8q24.21	0.99	1
8p-Del	Amp_20p11.23	0.99	1
Amp_11p15.5	Del_10q23.31	0.99	1
Amp_13q22.1	Del_19p13.3	0.99	1
Amp_16p11.2	Amp_20q11.21	0.99	1
Amp_19q13.11	Amp_20q13.12	0.99	1
Amp_20p11.21	Del_15q21.1	0.99	1
Amp_20q11.21	Del_17q24.3	0.99	1
Amp_20q12	Del_22q13.32	0.99	1
Amp_20q13.12	Del_19p13.3	0.99	1
Del_5q21.1	Del_15q15.2	0.99	1
Del_12p13.2	Del_17q24.3	0.99	1
Del_15q15.2	Del_21q11.2	0.99	1
Del_15q21.1	Del_17q24.3	0.99	1
ARID1A	ATXN3L	0.991	1
ARID1A	RBMX	0.991	1
ARID1A	MAP4K3	0.991	1
ARID1A	PRPS1	0.991	1
TP53	PTEN	0.991	1
TP53	THOC7	0.991	1
TP53	14q-Del	0.991	1
SOX9	ACVR1B	0.991	1
FAM123B	P2RY13	0.991	1
FAM123B	CHD3	0.991	1
TXNDC2	B2M	0.991	1
TXNDC2	NR1H3	0.991	1
TXNDC2	DDX26B	0.991	1
B2M	TOP2B	0.991	1
BCOR	MLH1	0.991	1
BCOR	SMAD4	0.991	1
MLH1	OR4D10	0.991	1
MLH1	NAA25	0.991	1
CRIPAK	IDH1	0.991	1
CRIPAK	Del_17q24.3	0.991	1
STARD3NL	ASXL1	0.991	1
NF2	EGR1	0.991	1
NF1	GMPS	0.991	1
MGA	GPATCH8	0.991	1
ASXL1	MPHOSPH10	0.991	1
NR1H3	TOP2B	0.991	1
MPHOSPH10	ALDH1A3	0.991	1
IDH1	C14orf43	0.991	1
SETD2	RPTN	0.991	1
SETD2	RBM44	0.991	1
CTNNB1	HPS3	0.991	1
PTEN	HPS3	0.991	1
ECT2	ALDH1A3	0.991	1
ECT2	C14orf43	0.991	1
RB1	C2orf29	0.991	1
RB1	MAP4K3	0.991	1
TOP2B	PIK3R1	0.991	1
L1TD1	PIK3R1	0.991	1
C2orf29	PIK3R1	0.991	1
PTCH1	HPS3	0.991	1
GGT1	PTGDR	0.991	1
GGT1	Del_7q31.1	0.991	1
ATG5	PTGDR	0.991	1
PRPS1	PTGDR	0.991	1
13q-Amp	Amp_8p11.21	0.991	1
16p-Amp	Del_9p21.3	0.991	1
17q-Amp	8q-Amp	0.991	1
20q-Amp	8p-Amp	0.991	1
7p-Amp	Del_16p13.3	0.991	1
17p-Del	Del_1p13.1	0.991	1
22q-Del	Del_5q12.1	0.991	1
4p-Del	Del_19p13.3	0.991	1
8p-Del	Del_19p13.3	0.991	1
Amp_13q12.13	Del_15q21.1	0.991	1
Amp_13q22.1	Amp_17q24.1	0.991	1
Amp_16q12.1	Del_8p22	0.991	1
Amp_17q12	Del_9p21.3	0.991	1
Amp_17q12	Del_18q21.2	0.991	1
Amp_17q12	Del_19p13.3	0.991	1
Del_1p33	Del_5q22.2	0.991	1
Del_1p33	Del_6q26	0.991	1
Del_1p33	Del_8q11.1	0.991	1
Del_3p14.2	Del_19p13.3	0.991	1
Del_5q22.2	Del_15q11.2	0.991	1
Del_8p22	Del_10q21.1	0.991	1
Del_8p22	Del_16p13.3	0.991	1
Del_15q15.2	Del_17q24.3	0.991	1
APC	CDH1	0.992	1
APC	20q-Amp	0.992	1
APC	Del_1p36.11	0.992	1
APC	Del_15q15.2	0.992	1
APC	Del_18p11.31	0.992	1
TP53	NF1	0.992	1
SOX9	MLH1	0.992	1
FAM123B	ZBTB20	0.992	1
TXNDC2	ALPK2	0.992	1
TXNDC2	SLK	0.992	1
ACVR1B	BCOR	0.992	1
B2M	FMN2	0.992	1
B2M	BCL9	0.992	1
B2M	CYLD	0.992	1
MLH1	NTAN1	0.992	1
MLH1	SETD2	0.992	1
MLH1	THOC7	0.992	1
MLH1	LINGO4	0.992	1
MLH1	IQCD	0.992	1
MLH1	PLEKHF2	0.992	1
NTAN1	RBMX	0.992	1
NTAN1	L1TD1	0.992	1
NTAN1	FKBP9	0.992	1
ZFP36L2	RHOA	0.992	1
WNT1	BCORL1	0.992	1
BMPR2	KDM6A	0.992	1
BMPR2	BCL9	0.992	1
RHOA	Del_6p25.3	0.992	1
FMN2	ASXL1	0.992	1
STARD3NL	RPTN	0.992	1
NF2	SLK	0.992	1
NF1	NAA25	0.992	1
NF1	RLIM	0.992	1
P2RY13	BCL9	0.992	1
ATXN3L	TPRKB	0.992	1
ATXN3L	IQCD	0.992	1
RBMX	ZBTB20	0.992	1
RBMX	TPRKB	0.992	1
RBMX	UBQLN2	0.992	1
RBMX	KIAA1586	0.992	1
SMAD2	HPS3	0.992	1
ALG12	BCORL1	0.992	1
ZBTB20	FKBP9	0.992	1
ZBTB20	IDH2	0.992	1
MPHOSPH10	PTEN	0.992	1
TPRKB	C2orf29	0.992	1
PLAGL2	GRB2	0.992	1
SETD2	CTNNB1	0.992	1
ALPK2	PRPS1	0.992	1
C11orf30	CHD3	0.992	1
EGR1	RB1	0.992	1
RPTN	DCLK2	0.992	1
PTEN	ECT2	0.992	1
RBM44	DCLK2	0.992	1
UBQLN2	L1TD1	0.992	1
UBQLN2	MAP4K3	0.992	1
UBQLN2	IDH2	0.992	1
GMPS	PTCH1	0.992	1
KIAA1586	FKBP9	0.992	1
KIAA1586	MAP4K3	0.992	1
KIAA1586	KCTD3	0.992	1
NLRC4	BCL9	0.992	1
C2orf29	PTCH1	0.992	1
C2orf29	IQCD	0.992	1
PTCH1	IDH2	0.992	1
LINGO4	FKBP9	0.992	1
C14orf184	GRB2	0.992	1
ATP6V1B1	Del_3q26.31	0.992	1
IQCD	IDH2	0.992	1
IQCD	PLXNA3	0.992	1
RLIM	SLK	0.992	1
CYLD	CYSLTR2	0.992	1
CYLD	PRPS1	0.992	1
GGT1	Amp_12p13.33	0.992	1
GGT1	Del_15q22.33	0.992	1
BCORL1	TMEM126A	0.992	1
13q-Amp	5q-Del	0.992	1
13q-Amp	8p-Del	0.992	1
17q-Amp	7p-Amp	0.992	1
7q-Amp	18p-Del	0.992	1
8p-Amp	Amp_20q11.21	0.992	1
8q-Amp	Amp_13q12.13	0.992	1
15q-Del	Del_1p13.1	0.992	1
17p-Del	Del_10q23.31	0.992	1
1p-Del	Del_3q26.31	0.992	1
5q-Del	Amp_16q12.1	0.992	1
8p-Del	Amp_8p11.21	0.992	1
Amp_5p13.2	Del_5q22.2	0.992	1
Amp_6p21.1	Del_6p25.3	0.992	1
Amp_11p15.5	Del_18q12.2	0.992	1
Amp_12p13.33	Del_4q22.1	0.992	1
Amp_13q12.13	Del_12p13.2	0.992	1
Amp_17p11.2	Amp_20q11.21	0.992	1
Del_3q26.31	Del_6p25.3	0.992	1
Del_3q26.31	Del_14q31.1	0.992	1
Del_5q21.1	Del_15q11.2	0.992	1
Del_5q22.2	Del_10q21.1	0.992	1
Del_10q23.31	Del_15q21.1	0.992	1
Del_12p13.2	Del_16p13.3	0.992	1
APC	Del_4q22.1	0.993	1
ARID1A	FAM123B	0.993	1
TP53	CTNNB1	0.993	1
ACVR1B	MLH1	0.993	1
BCOR	ALPK2	0.993	1
BCOR	ALDH1A3	0.993	1
CDH1	MGA	0.993	1
NTAN1	SMAD2	0.993	1
WNT1	SLK	0.993	1
WNT1	12q-Amp	0.993	1
BMPR2	FMN2	0.993	1
BMPR2	ASXL1	0.993	1
SELPLG	THOC7	0.993	1
SELPLG	LINGO4	0.993	1
KDM6A	ECT2	0.993	1
MAPK6	DIP2B	0.993	1
MAPK6	EGR1	0.993	1
MAPK6	GMPS	0.993	1
MAPK6	GRB2	0.993	1
FMN2	ZBTB20	0.993	1
STARD3NL	Del_3q26.31	0.993	1
OR4D10	TOP2B	0.993	1
OR4D10	ATM	0.993	1
PRKDC	P2RY13	0.993	1
PRKDC	CYSLTR2	0.993	1
MVK	RB1	0.993	1
MVK	TOP2B	0.993	1
MVK	ATM	0.993	1
ATXN3L	ECT2	0.993	1
DIP2B	ALPK2	0.993	1
FBXW7	C14orf184	0.993	1
SMAD2	KIAA1586	0.993	1
SMAD2	LINGO4	0.993	1
ALG12	12q-Amp	0.993	1
ALG12	Del_16q23.1	0.993	1
MPHOSPH10	ATM	0.993	1
MPHOSPH10	KCTD3	0.993	1
MPHOSPH10	GRB2	0.993	1
GPATCH8	TOP2B	0.993	1
IDH1	EGR1	0.993	1
SETD2	PTEN	0.993	1
SETD2	GMPS	0.993	1
SETD2	L1TD1	0.993	1
SETD2	C2orf29	0.993	1
SETD2	FKBP9	0.993	1
SETD2	ATG5	0.993	1
SETD2	KCTD3	0.993	1
SETD2	SMAD4	0.993	1
ALPK2	C15orf52	0.993	1
C11orf30	SLK	0.993	1
ROS1	CHD3	0.993	1
RPTN	NLRC4	0.993	1
CTNNB1	SLC26A8	0.993	1
ECT2	L1TD1	0.993	1
UBQLN2	SLC26A8	0.993	1
ALDH1A3	GMPS	0.993	1
RB1	RLIM	0.993	1
TOP2B	NAA25	0.993	1
NLRC4	HPS3	0.993	1
NLRC4	SMAD4	0.993	1
PTCH1	ATP6V1B1	0.993	1
PTCH1	GRB2	0.993	1
C14orf43	ATM	0.993	1
C14orf43	IDH2	0.993	1
ATP6V1B1	ATM	0.993	1
GGT1	8p-Amp	0.993	1
GGT1	15q-Del	0.993	1
ATG5	8p-Amp	0.993	1
TMEM126A	Amp_8q24.21	0.993	1
TMEM126A	Del_8p22	0.993	1
TMEM126A	Del_10q25.2	0.993	1
TMEM126A	Del_22q13.32	0.993	1
PLXNA3	8p-Amp	0.993	1
PCBP1	Del_19p13.3	0.993	1
12q-Amp	Amp_20p11.21	0.993	1
12q-Amp	Del_7q31.1	0.993	1
13q-Amp	Del_15q15.2	0.993	1
17q-Amp	14q-Del	0.993	1
17q-Amp	Del_18p11.31	0.993	1
20p-Amp	Del_10q21.1	0.993	1
20q-Amp	Amp_6p21.1	0.993	1
7q-Amp	Del_8p23.2	0.993	1
7q-Amp	Del_17p12	0.993	1
8q-Amp	Amp_19q13.11	0.993	1
14q-Del	21q-Del	0.993	1
14q-Del	Del_12p13.2	0.993	1
8p-Del	Del_3q26.31	0.993	1
Amp_11p15.5	Amp_17q12	0.993	1
Amp_16p11.2	Del_16p13.3	0.993	1
Amp_17q12	Del_18q22.1	0.993	1
Amp_19q13.11	Amp_20p11.23	0.993	1
Amp_19q13.11	Amp_20q12	0.993	1
Amp_20p11.23	Del_10q25.2	0.993	1
Amp_20q12	Del_5q21.1	0.993	1
Amp_20q12	Del_19p13.3	0.993	1
Amp_20q13.12	Del_3p26.1	0.993	1
Amp_20q13.12	Del_4q22.1	0.993	1
Amp_20q13.12	Del_5q12.1	0.993	1
Del_1p33	Del_3p14.2	0.993	1
Del_1p33	Del_15q11.2	0.993	1
Del_1p13.1	Del_16p13.3	0.993	1
Del_3p26.1	Del_15q21.1	0.993	1
Del_3p26.1	Del_17q24.3	0.993	1
Del_4q22.1	Del_17q24.3	0.993	1
Del_4q35.1	Del_5q22.2	0.993	1
Del_5q12.1	Del_10q25.2	0.993	1
Del_5q12.1	Del_18q22.1	0.993	1
Del_8q11.1	Del_10q23.31	0.993	1
Del_8q11.1	Del_15q22.33	0.993	1
Del_10q21.1	Del_17q24.3	0.993	1
APC	18q-Del	0.994	1
ARID1A	RBM44	0.994	1
RNF43	B2M	0.994	1
RNF43	NF1	0.994	1
RNF43	ASXL1	0.994	1
RNF43	ALG12	0.994	1
TP53	Del_4q22.1	0.994	1
FAM123B	OR4D10	0.994	1
FAM123B	GPATCH8	0.994	1
TXNDC2	NF2	0.994	1
TXNDC2	CTNNB1	0.994	1
TXNDC2	RB1	0.994	1
B2M	TPRKB	0.994	1
B2M	UBQLN2	0.994	1
CDH1	ZBTB20	0.994	1
CDH1	LINGO4	0.994	1
MLH1	STARD3NL	0.994	1
MLH1	ATXN3L	0.994	1
MLH1	RPTN	0.994	1
MLH1	IDH2	0.994	1
NTAN1	DDX26B	0.994	1
ZFP36L2	BMPR2	0.994	1
BMPR2	EGR1	0.994	1
BMPR2	RB1	0.994	1
BMPR2	ATP6V1B1	0.994	1
BMPR2	RLIM	0.994	1
BMPR2	GRB2	0.994	1
SELPLG	NF1	0.994	1
SELPLG	PIK3R1	0.994	1
CRIPAK	MGA	0.994	1
KDM6A	PLAGL2	0.994	1
MAPK6	PRKDC	0.994	1
MAPK6	MGA	0.994	1
FMN2	SLK	0.994	1
NF2	P2RY13	0.994	1
NF2	FBXW7	0.994	1
NF1	ASXL1	0.994	1
OR4D10	BCL9	0.994	1
MGA	PIK3R1	0.994	1
P2RY13	PLEKHF2	0.994	1
P2RY13	Del_3p14.2	0.994	1
MVK	C11orf30	0.994	1
ATXN3L	GRB2	0.994	1
DIP2B	SETD2	0.994	1
FBXW7	IDH2	0.994	1
RBMX	EGR1	0.994	1
ASXL1	FKBP9	0.994	1
ASXL1	PLXNA3	0.994	1
SMAD2	ALPK2	0.994	1
ALG12	TOP2B	0.994	1
NR1H3	LINGO4	0.994	1
NR1H3	PLEKHF2	0.994	1
ZBTB20	ATG5	0.994	1
TPRKB	CYSLTR2	0.994	1
PLAGL2	ATG5	0.994	1
GPATCH8	CYLD	0.994	1
ALPK2	C11orf30	0.994	1
C11orf30	NAA25	0.994	1
EGR1	L1TD1	0.994	1
RBM44	SLK	0.994	1
DDX26B	UBQLN2	0.994	1
DDX26B	PLEKHF2	0.994	1
UBQLN2	ATM	0.994	1
TOP2B	BCL9	0.994	1
TOP2B	CYLD	0.994	1
TOP2B	Del_7q31.1	0.994	1
KIAA1586	CYSLTR2	0.994	1
DCLK2	SLK	0.994	1
C14orf184	ATG5	0.994	1
BCL9	RLIM	0.994	1
NAA25	CYLD	0.994	1
RLIM	CYLD	0.994	1
GGT1	7q-Amp	0.994	1
CYSLTR2	PCBP1	0.994	1
MAP4K3	GRB2	0.994	1
KCTD3	GRB2	0.994	1
TMEM126A	Amp_5p13.2	0.994	1
GRB2	PLXNA3	0.994	1
13q-Amp	1q-Amp	0.994	1
13q-Amp	15q-Del	0.994	1
13q-Amp	Del_3p26.1	0.994	1
1q-Amp	Amp_13q12.13	0.994	1
20p-Amp	Del_14q31.1	0.994	1
20q-Amp	Amp_19q13.11	0.994	1
7p-Amp	Amp_19q13.11	0.994	1
7q-Amp	Del_18p11.31	0.994	1
8q-Amp	Amp_17q24.1	0.994	1
18p-Del	Del_12p13.2	0.994	1
18q-Del	Del_10q21.1	0.994	1
1p-Del	5q-Del	0.994	1
22q-Del	Amp_20q11.21	0.994	1
4p-Del	Amp_16q12.1	0.994	1
4q-Del	Del_3q26.31	0.994	1
4q-Del	Del_8q11.1	0.994	1
5q-Del	Del_8p23.2	0.994	1
8p-Del	Amp_8q24.21	0.994	1
Amp_5p13.2	Amp_8p11.23	0.994	1
Amp_5p13.2	Amp_20q11.21	0.994	1
Amp_8p11.23	Amp_12p13.33	0.994	1
Amp_8p11.21	Amp_13q12.13	0.994	1
Amp_11p15.5	Amp_17q24.1	0.994	1
Amp_13q12.13	Amp_17p11.2	0.994	1
Amp_17q24.1	Amp_20q13.12	0.994	1
Amp_17q24.1	Del_8p23.2	0.994	1
Amp_17q24.1	Del_18p11.31	0.994	1
Amp_17q24.1	Del_18q21.2	0.994	1
Amp_20q11.21	Del_1p33	0.994	1
Del_1p36.11	Del_5q12.1	0.994	1
Del_3p26.1	Del_15q15.2	0.994	1
Del_4q22.1	Del_15q21.1	0.994	1
Del_4q35.1	Del_15q11.2	0.994	1
Del_5q21.1	Del_17q24.3	0.994	1
Del_12p13.2	Del_18p11.31	0.994	1
APC	Amp_20q11.21	0.995	1
APC	Amp_20q12	0.995	1
ARID1A	TOP2B	0.995	1
ARID1A	IQCD	0.995	1
TP53	8q-Amp	0.995	1
SOX9	RBM44	0.995	1
TXNDC2	CDH1	0.995	1
TXNDC2	RPTN	0.995	1
BCOR	FBXW7	0.995	1
BCOR	GMPS	0.995	1
BCOR	C2orf29	0.995	1
BCOR	MAP4K3	0.995	1
BCOR	BCORL1	0.995	1
BCOR	IDH2	0.995	1
CDH1	ASXL1	0.995	1
MLH1	PLAGL2	0.995	1
NTAN1	GPATCH8	0.995	1
ZFP36L2	UBQLN2	0.995	1
ZFP36L2	LINGO4	0.995	1
ZFP36L2	HPS3	0.995	1
WNT1	C11orf30	0.995	1
WNT1	CTNNB1	0.995	1
SELPLG	GRB2	0.995	1
CRIPAK	NF2	0.995	1
KDM6A	L1TD1	0.995	1
MAPK6	NF2	0.995	1
MAPK6	SLC26A8	0.995	1
MAPK6	PRPS1	0.995	1
FMN2	OR4D10	0.995	1
FMN2	TPRKB	0.995	1
FMN2	ROS1	0.995	1
FMN2	ECT2	0.995	1
FMN2	UBQLN2	0.995	1
FMN2	C14orf43	0.995	1
FMN2	IQCD	0.995	1
STARD3NL	TOP2B	0.995	1
NF2	C14orf43	0.995	1
NF2	PRPS1	0.995	1
NF1	BCORL1	0.995	1
OR4D10	TPRKB	0.995	1
OR4D10	LINGO4	0.995	1
P2RY13	ZBTB20	0.995	1
MVK	KIAA1586	0.995	1
MVK	LINGO4	0.995	1
ATXN3L	C2orf29	0.995	1
ATXN3L	MAP4K3	0.995	1
DIP2B	GMPS	0.995	1
DIP2B	MAP4K3	0.995	1
DIP2B	KCTD3	0.995	1
RBMX	FKBP9	0.995	1
SMAD2	EGR1	0.995	1
NR1H3	ZBTB20	0.995	1
MPHOSPH10	SLC26A8	0.995	1
MPHOSPH10	PRPS1	0.995	1
PLAGL2	PTEN	0.995	1
PLAGL2	CHD3	0.995	1
PLAGL2	PTGDR	0.995	1
GPATCH8	PLEKHF2	0.995	1
SETD2	CYLD	0.995	1
C11orf30	Del_7q31.1	0.995	1
ROS1	UBQLN2	0.995	1
ROS1	PIK3R1	0.995	1
ROS1	IQCD	0.995	1
ROS1	RLIM	0.995	1
PTEN	C14orf184	0.995	1
PTEN	BCL9	0.995	1
ECT2	PRPS1	0.995	1
UBQLN2	ATP6V1B1	0.995	1
ALDH1A3	ATG5	0.995	1
ALDH1A3	PRPS1	0.995	1
RB1	SLC26A8	0.995	1
L1TD1	C2orf29	0.995	1
L1TD1	FKBP9	0.995	1
NLRC4	C14orf184	0.995	1
C2orf29	KCTD3	0.995	1
C2orf29	PLXNA3	0.995	1
PTCH1	SLC26A8	0.995	1
C14orf43	PRPS1	0.995	1
PIK3R1	TMEM126A	0.995	1
ATP6V1B1	PLEKHF2	0.995	1
CHD3	C15orf52	0.995	1
HPS3	SLK	0.995	1
GGT1	18p-Del	0.995	1
MAP4K3	IDH2	0.995	1
TMEM126A	Del_8p23.2	0.995	1
12q-Amp	20p-Amp	0.995	1
13q-Amp	Del_22q13.32	0.995	1
16p-Amp	Del_10q23.31	0.995	1
17q-Amp	7q-Amp	0.995	1
17q-Amp	Amp_8p11.21	0.995	1
17q-Amp	Del_12p13.2	0.995	1
20p-Amp	14q-Del	0.995	1
20p-Amp	Del_8p23.2	0.995	1
8q-Amp	18q-Del	0.995	1
15q-Del	Amp_13q22.1	0.995	1
1p-Del	Amp_20q13.12	0.995	1
22q-Del	Del_3q26.31	0.995	1
22q-Del	Del_6q26	0.995	1
22q-Del	Del_16p13.3	0.995	1
4q-Del	Del_10q23.31	0.995	1
5q-Del	Amp_8p11.23	0.995	1
5q-Del	Del_14q31.1	0.995	1
8p-Del	Del_5q12.1	0.995	1
Amp_8p11.21	Del_18q22.1	0.995	1
Amp_11p15.5	Del_22q13.32	0.995	1
Amp_13q22.1	Del_15q15.2	0.995	1
Amp_16p11.2	Amp_17p11.2	0.995	1
Amp_16p11.2	Del_19p13.3	0.995	1
Amp_19q13.11	Amp_20q11.21	0.995	1
Del_1p36.11	Del_4q22.1	0.995	1
Del_1p13.1	Del_5q21.1	0.995	1
Del_1p13.1	Del_9p21.3	0.995	1
Del_1p13.1	Del_15q21.1	0.995	1
Del_3q26.31	Del_8q11.1	0.995	1
Del_4q22.1	Del_6q26	0.995	1
Del_4q22.1	Del_8q11.1	0.995	1
Del_4q22.1	Del_15q15.2	0.995	1
Del_5q12.1	Del_18p11.31	0.995	1
Del_6q26	Del_17p12	0.995	1
Del_8p23.2	Del_10q21.1	0.995	1
Del_9p21.3	Del_17q24.3	0.995	1
Del_9p21.3	Del_18q12.2	0.995	1
APC	Del_18q22.1	0.996	1
ARID1A	PIK3R1	0.996	1
ARID1A	Del_7q31.1	0.996	1
RNF43	CDH1	0.996	1
RNF43	ECT2	0.996	1
RNF43	ATP6V1B1	0.996	1
RNF43	NAA25	0.996	1
RNF43	SLK	0.996	1
TP53	15q-Del	0.996	1
TP53	Del_3p26.1	0.996	1
TP53	Del_22q13.32	0.996	1
SOX9	C2orf29	0.996	1
SOX9	C15orf52	0.996	1
FAM123B	SETD2	0.996	1
FAM123B	DCLK2	0.996	1
TXNDC2	FMN2	0.996	1
ACVR1B	L1TD1	0.996	1
ACVR1B	NLRC4	0.996	1
ACVR1B	KCTD3	0.996	1
B2M	MAPK6	0.996	1
B2M	EGR1	0.996	1
B2M	C14orf43	0.996	1
BCOR	TPRKB	0.996	1
CDH1	WNT1	0.996	1
CDH1	CRIPAK	0.996	1
CDH1	PTGDR	0.996	1
MLH1	ROS1	0.996	1
NTAN1	RPTN	0.996	1
ZFP36L2	NF2	0.996	1
BMPR2	CRIPAK	0.996	1
BMPR2	MPHOSPH10	0.996	1
BMPR2	RBM44	0.996	1
SELPLG	GMPS	0.996	1
KDM6A	SLC26A8	0.996	1
MAPK6	NF1	0.996	1
MAPK6	DDX26B	0.996	1
MAPK6	NLRC4	0.996	1
RHOA	TOP2B	0.996	1
STARD3NL	UBQLN2	0.996	1
STARD3NL	RB1	0.996	1
STARD3NL	HPS3	0.996	1
NF2	OR4D10	0.996	1
NF2	C11orf30	0.996	1
NF1	MPHOSPH10	0.996	1
NF1	C11orf30	0.996	1
NF1	BCL9	0.996	1
MGA	GMPS	0.996	1
MGA	MAP4K3	0.996	1
MGA	IDH2	0.996	1
P2RY13	EGR1	0.996	1
P2RY13	CTNNB1	0.996	1
ATXN3L	PRPS1	0.996	1
DIP2B	KIAA1586	0.996	1
DIP2B	PTCH1	0.996	1
DIP2B	SLC26A8	0.996	1
DIP2B	PLEKHF2	0.996	1
RBMX	PRPS1	0.996	1
SMAD2	L1TD1	0.996	1
SMAD2	FKBP9	0.996	1
SMAD2	MAP4K3	0.996	1
ALG12	1q-Amp	0.996	1
ALG12	8p-Amp	0.996	1
NR1H3	CTNNB1	0.996	1
NR1H3	ECT2	0.996	1
ZBTB20	ATP6V1B1	0.996	1
ZBTB20	NAA25	0.996	1
ZBTB20	PTGDR	0.996	1
MPHOSPH10	CTNNB1	0.996	1
MPHOSPH10	NLRC4	0.996	1
MPHOSPH10	BCORL1	0.996	1
TPRKB	RPTN	0.996	1
PLAGL2	Del_16q23.1	0.996	1
SETD2	HPS3	0.996	1
ALPK2	DDX26B	0.996	1
ALPK2	CYSLTR2	0.996	1
C11orf30	RB1	0.996	1
C11orf30	DCLK2	0.996	1
C11orf30	BCL9	0.996	1
EGR1	DDX26B	0.996	1
RPTN	RB1	0.996	1
RPTN	PLEKHF2	0.996	1
CTNNB1	ALDH1A3	0.996	1
CTNNB1	C14orf43	0.996	1
RBM44	LINGO4	0.996	1
RBM44	BCL9	0.996	1
RBM44	IQCD	0.996	1
RBM44	HPS3	0.996	1
RBM44	CYLD	0.996	1
DDX26B	ALDH1A3	0.996	1
DDX26B	C14orf43	0.996	1
RB1	C14orf184	0.996	1
GMPS	ATG5	0.996	1
KIAA1586	DCLK2	0.996	1
NLRC4	C14orf43	0.996	1
DCLK2	CYLD	0.996	1
C2orf29	ATG5	0.996	1
PTCH1	C14orf184	0.996	1
C14orf43	BCORL1	0.996	1
PIK3R1	CHD3	0.996	1
SLC26A8	FKBP9	0.996	1
ATM	ATG5	0.996	1
GGT1	Del_3p26.1	0.996	1
PRPS1	Del_16p13.3	0.996	1
PTGDR	Del_5q22.2	0.996	1
C15orf52	SLK	0.996	1
13q-Amp	Del_15q11.2	0.996	1
16p-Amp	Amp_13q12.13	0.996	1
16p-Amp	Amp_20p11.23	0.996	1
17q-Amp	20p-Amp	0.996	1
17q-Amp	Amp_8p11.23	0.996	1
20p-Amp	8p-Amp	0.996	1
20p-Amp	Amp_6p21.1	0.996	1
20p-Amp	Amp_8p11.23	0.996	1
20q-Amp	Del_15q21.1	0.996	1
17p-Del	Del_3q26.31	0.996	1
17p-Del	Del_5q12.1	0.996	1
18q-Del	Amp_11p15.5	0.996	1
21q-Del	4p-Del	0.996	1
4p-Del	Del_10q23.31	0.996	1
4q-Del	Del_15q22.33	0.996	1
Amp_5p13.2	Amp_20p11.23	0.996	1
Amp_5p13.2	Del_8p22	0.996	1
Amp_8p11.23	Del_8p23.2	0.996	1
Amp_8p11.21	Amp_13q22.1	0.996	1
Amp_8p11.21	Del_18q12.2	0.996	1
Amp_8q24.21	Del_3q26.31	0.996	1
Amp_12p13.33	Del_7q31.1	0.996	1
Amp_16p11.2	Amp_20q13.12	0.996	1
Amp_16p11.2	Del_8p22	0.996	1
Amp_16q12.1	Amp_20p11.23	0.996	1
Amp_17q24.1	Amp_20p11.21	0.996	1
Amp_20q11.21	Del_1p13.1	0.996	1
Amp_20q12	Del_3p26.1	0.996	1
Amp_20q12	Del_5q12.1	0.996	1
Amp_20q13.12	Del_1p33	0.996	1
Amp_20q13.12	Del_12p13.2	0.996	1
Del_1p33	Del_17p12	0.996	1
Del_1p13.1	Del_15q15.2	0.996	1
Del_3p26.1	Del_19p13.3	0.996	1
Del_5q21.1	Del_6q26	0.996	1
Del_8p22	Del_12p13.2	0.996	1
Del_10q23.31	Del_16p13.3	0.996	1
Del_10q25.2	Del_18q12.2	0.996	1
Del_16p13.3	Del_19p13.3	0.996	1
Del_17q24.3	Del_21q11.2	0.996	1
APC	18p-Del	0.997	1
ARID1A	B2M	0.997	1
ARID1A	P2RY13	0.997	1
ARID1A	CTNNB1	0.997	1
ARID1A	NLRC4	0.997	1
ARID1A	C14orf43	0.997	1
ARID1A	C15orf52	0.997	1
ARID1A	SMAD4	0.997	1
TP53	13q-Amp	0.997	1
TP53	20p-Amp	0.997	1
TXNDC2	MAPK6	0.997	1
TXNDC2	PTEN	0.997	1
ACVR1B	TPRKB	0.997	1
ACVR1B	TOP2B	0.997	1
ACVR1B	SLK	0.997	1
B2M	KDM6A	0.997	1
B2M	GMPS	0.997	1
BCOR	DDX26B	0.997	1
CDH1	KDM6A	0.997	1
CDH1	RHOA	0.997	1
CDH1	BCL9	0.997	1
NTAN1	C15orf52	0.997	1
ZFP36L2	CRIPAK	0.997	1
ZFP36L2	ALPK2	0.997	1
ZFP36L2	EGR1	0.997	1
ZFP36L2	ALDH1A3	0.997	1
ZFP36L2	C2orf29	0.997	1
ZFP36L2	C14orf43	0.997	1
ZFP36L2	KCTD3	0.997	1
WNT1	MPHOSPH10	0.997	1
WNT1	ALDH1A3	0.997	1
WNT1	IDH2	0.997	1
BMPR2	FKBP9	0.997	1
BMPR2	ATG5	0.997	1
BMPR2	IDH2	0.997	1
BMPR2	Del_16q23.1	0.997	1
SELPLG	GGT1	0.997	1
SELPLG	PRPS1	0.997	1
SELPLG	Amp_17p11.2	0.997	1
KDM6A	PRKDC	0.997	1
KDM6A	CTNNB1	0.997	1
MAPK6	TOP2B	0.997	1
MAPK6	PTGDR	0.997	1
MAPK6	Del_16q23.1	0.997	1
RHOA	HPS3	0.997	1
FMN2	EGR1	0.997	1
FMN2	RPTN	0.997	1
FMN2	CTNNB1	0.997	1
FMN2	C2orf29	0.997	1
FMN2	FKBP9	0.997	1
STARD3NL	PRKDC	0.997	1
STARD3NL	ZBTB20	0.997	1
STARD3NL	EGR1	0.997	1
STARD3NL	ROS1	0.997	1
STARD3NL	ATM	0.997	1
NF2	NLRC4	0.997	1
NF2	HPS3	0.997	1
NF1	LINGO4	0.997	1
OR4D10	GMPS	0.997	1
OR4D10	C14orf43	0.997	1
OR4D10	PIK3R1	0.997	1
OR4D10	FKBP9	0.997	1
OR4D10	SMAD4	0.997	1
MGA	DIP2B	0.997	1
P2RY13	DIP2B	0.997	1
P2RY13	SMAD2	0.997	1
P2RY13	L1TD1	0.997	1
P2RY13	ATG5	0.997	1
P2RY13	PRPS1	0.997	1
MVK	EGR1	0.997	1
MVK	ALDH1A3	0.997	1
MVK	GMPS	0.997	1
MVK	L1TD1	0.997	1
MVK	PIK3R1	0.997	1
MVK	KCTD3	0.997	1
MVK	IDH2	0.997	1
ATXN3L	ALG12	0.997	1
ATXN3L	DDX26B	0.997	1
ATXN3L	NLRC4	0.997	1
DIP2B	DDX26B	0.997	1
DIP2B	TOP2B	0.997	1
DIP2B	ATM	0.997	1
FBXW7	ALDH1A3	0.997	1
RBMX	GPATCH8	0.997	1
RBMX	PTEN	0.997	1
RBMX	DDX26B	0.997	1
RBMX	ATM	0.997	1
RBMX	CYSLTR2	0.997	1
ASXL1	ALPK2	0.997	1
ALG12	ECT2	0.997	1
ALG12	C14orf43	0.997	1
NR1H3	C2orf29	0.997	1
NR1H3	KCTD3	0.997	1
ZBTB20	ALPK2	0.997	1
ZBTB20	RBM44	0.997	1
MPHOSPH10	RB1	0.997	1
MPHOSPH10	SMAD4	0.997	1
TPRKB	SMAD4	0.997	1
PLAGL2	C11orf30	0.997	1
PLAGL2	ROS1	0.997	1
GPATCH8	IDH1	0.997	1
GPATCH8	ECT2	0.997	1
GPATCH8	GMPS	0.997	1
GPATCH8	KCTD3	0.997	1
SETD2	ROS1	0.997	1
SETD2	DDX26B	0.997	1
ALPK2	UBQLN2	0.997	1
ALPK2	KIAA1586	0.997	1
ALPK2	PTCH1	0.997	1
ALPK2	ATP6V1B1	0.997	1
ALPK2	NAA25	0.997	1
ALPK2	BCORL1	0.997	1
C11orf30	ATM	0.997	1
C11orf30	C15orf52	0.997	1
EGR1	ROS1	0.997	1
EGR1	RPTN	0.997	1
ROS1	GRB2	0.997	1
CTNNB1	NLRC4	0.997	1
PTEN	PIK3R1	0.997	1
PTEN	PLXNA3	0.997	1
ECT2	SMAD4	0.997	1
DDX26B	PTCH1	0.997	1
DDX26B	MAP4K3	0.997	1
UBQLN2	C15orf52	0.997	1
ALDH1A3	PTCH1	0.997	1
ALDH1A3	NAA25	0.997	1
ALDH1A3	PTGDR	0.997	1
ALDH1A3	SMAD4	0.997	1
GMPS	CHD3	0.997	1
GMPS	ATM	0.997	1
GMPS	PTGDR	0.997	1
L1TD1	NLRC4	0.997	1
L1TD1	ATM	0.997	1
L1TD1	BCORL1	0.997	1
NLRC4	FKBP9	0.997	1
PTCH1	C14orf43	0.997	1
PTCH1	ATG5	0.997	1
LINGO4	C15orf52	0.997	1
LINGO4	Amp_12p13.33	0.997	1
C14orf43	NAA25	0.997	1
C14orf43	SLK	0.997	1
C14orf43	SMAD4	0.997	1
PIK3R1	ATP6V1B1	0.997	1
BCL9	C15orf52	0.997	1
NAA25	MAP4K3	0.997	1
NAA25	KCTD3	0.997	1
NAA25	IDH2	0.997	1
NAA25	GRB2	0.997	1
SLC26A8	PRPS1	0.997	1
IQCD	C15orf52	0.997	1
CHD3	IDH2	0.997	1
CHD3	PLXNA3	0.997	1
RLIM	SMAD4	0.997	1
GGT1	7p-Amp	0.997	1
GGT1	Amp_8q24.21	0.997	1
GGT1	Amp_16q12.1	0.997	1
CYSLTR2	PRPS1	0.997	1
TMEM126A	22q-Del	0.997	1
13q-Amp	17q-Amp	0.997	1
13q-Amp	Del_12p13.2	0.997	1
20p-Amp	Amp_17q24.1	0.997	1
20p-Amp	Del_8p22	0.997	1
20q-Amp	Amp_17q24.1	0.997	1
20q-Amp	Del_3p26.1	0.997	1
20q-Amp	Del_22q13.32	0.997	1
7p-Amp	Amp_16q12.1	0.997	1
7p-Amp	Amp_17p11.2	0.997	1
7p-Amp	Amp_17q12	0.997	1
8q-Amp	Del_18q21.2	0.997	1
15q-Del	4q-Del	0.997	1
17p-Del	Del_9p21.3	0.997	1
18q-Del	Amp_17q12	0.997	1
18q-Del	Del_5q12.1	0.997	1
18q-Del	Del_9p21.3	0.997	1
1p-Del	Amp_20q12	0.997	1
1p-Del	Del_5q12.1	0.997	1
21q-Del	22q-Del	0.997	1
21q-Del	4q-Del	0.997	1
21q-Del	Del_17q24.3	0.997	1
22q-Del	Amp_20q12	0.997	1
4p-Del	Amp_16p11.2	0.997	1
4q-Del	Del_3p14.2	0.997	1
5q-Del	Amp_13q22.1	0.997	1
5q-Del	Del_4q22.1	0.997	1
Amp_5p13.2	Amp_16p11.2	0.997	1
Amp_5p13.2	Amp_20p11.21	0.997	1
Amp_5p13.2	Amp_20q13.12	0.997	1
Amp_5p13.2	Del_17q24.3	0.997	1
Amp_5p13.2	Del_21q11.2	0.997	1
Amp_8p11.23	Amp_17q24.1	0.997	1
Amp_8p11.23	Del_12p13.2	0.997	1
Amp_8p11.21	Del_18q21.2	0.997	1
Amp_8q24.21	Amp_12p13.33	0.997	1
Amp_8q24.21	Amp_13q12.13	0.997	1
Amp_11p15.5	Del_1p36.11	0.997	1
Amp_13q12.13	Amp_17q12	0.997	1
Amp_13q12.13	Del_9p21.3	0.997	1
Amp_13q22.1	Del_4q22.1	0.997	1
Amp_16p11.2	Amp_20p11.21	0.997	1
Amp_17p11.2	Amp_19q13.11	0.997	1
Amp_17q12	Del_18q12.2	0.997	1
Amp_17q24.1	Amp_20q12	0.997	1
Amp_20p11.23	Del_10q21.1	0.997	1
Amp_20p11.21	Del_15q15.2	0.997	1
Amp_20p11.21	Del_15q22.33	0.997	1
Amp_20p11.21	Del_19p13.3	0.997	1
Amp_20q11.21	Del_5q12.1	0.997	1
Amp_20q12	Del_4q22.1	0.997	1
Amp_20q13.12	Del_1p13.1	0.997	1
Amp_20q13.12	Del_22q13.32	0.997	1
Del_1p36.11	Del_5q21.1	0.997	1
Del_1p13.1	Del_5q22.2	0.997	1
Del_3p26.1	Del_6p25.3	0.997	1
Del_3p14.2	Del_14q31.1	0.997	1
Del_4q22.1	Del_7q31.1	0.997	1
Del_4q22.1	Del_10q23.31	0.997	1
Del_4q35.1	Del_17q24.3	0.997	1
Del_5q12.1	Del_18q12.2	0.997	1
Del_5q12.1	Del_18q21.2	0.997	1
Del_6q26	Del_15q15.2	0.997	1
Del_6q26	Del_18q12.2	0.997	1
Del_8q11.1	Del_15q15.2	0.997	1
Del_10q21.1	Del_18q12.2	0.997	1
Del_10q23.31	Del_19p13.3	0.997	1
Del_10q25.2	Del_15q21.1	0.997	1
Del_10q25.2	Del_17q24.3	0.997	1
ARID1A	MLH1	0.998	1
ARID1A	DIP2B	0.998	1
ARID1A	GPATCH8	0.998	1
ARID1A	SETD2	0.998	1
ARID1A	GMPS	0.998	1
ARID1A	FKBP9	0.998	1
ARID1A	HPS3	0.998	1
RNF43	SETD2	0.998	1
RNF43	RB1	0.998	1
RNF43	GMPS	0.998	1
RNF43	L1TD1	0.998	1
TP53	RPTN	0.998	1
TP53	22q-Del	0.998	1
TP53	Del_14q31.1	0.998	1
TP53	Del_15q11.2	0.998	1
TP53	Del_15q22.33	0.998	1
SOX9	ALG12	0.998	1
FAM123B	ROS1	0.998	1
TXNDC2	RBMX	0.998	1
TXNDC2	TPRKB	0.998	1
TXNDC2	KIAA1586	0.998	1
TXNDC2	PLEKHF2	0.998	1
ACVR1B	EGR1	0.998	1
ACVR1B	BCL9	0.998	1
B2M	OR4D10	0.998	1
B2M	P2RY13	0.998	1
B2M	NAA25	0.998	1
BCOR	KDM6A	0.998	1
BCOR	EGR1	0.998	1
BCOR	PTEN	0.998	1
CDH1	GPATCH8	0.998	1
CDH1	C2orf29	0.998	1
CDH1	HPS3	0.998	1
MLH1	ASXL1	0.998	1
MLH1	NR1H3	0.998	1
MLH1	DDX26B	0.998	1
MLH1	C14orf43	0.998	1
MLH1	ATM	0.998	1
NTAN1	ASXL1	0.998	1
NTAN1	PTCH1	0.998	1
ZFP36L2	CTNNB1	0.998	1
ZFP36L2	ATG5	0.998	1
WNT1	BMPR2	0.998	1
WNT1	DDX26B	0.998	1
WNT1	SLC26A8	0.998	1
BMPR2	NF2	0.998	1
BMPR2	NF1	0.998	1
BMPR2	SLC26A8	0.998	1
BMPR2	CYLD	0.998	1
SELPLG	OR4D10	0.998	1
SELPLG	RLIM	0.998	1
SELPLG	PTGDR	0.998	1
KDM6A	GPATCH8	0.998	1
KDM6A	CYLD	0.998	1
MAPK6	PLAGL2	0.998	1
MAPK6	C11orf30	0.998	1
MAPK6	RBM44	0.998	1
MAPK6	CYLD	0.998	1
FMN2	NF2	0.998	1
FMN2	CHD3	0.998	1
FMN2	SMAD4	0.998	1
STARD3NL	PTEN	0.998	1
STARD3NL	PIK3R1	0.998	1
STARD3NL	MAP4K3	0.998	1
NF2	DIP2B	0.998	1
NF1	ATXN3L	0.998	1
NF1	GPATCH8	0.998	1
OR4D10	CYSLTR2	0.998	1
PRKDC	SMAD4	0.998	1
MGA	DDX26B	0.998	1
P2RY13	MVK	0.998	1
P2RY13	GPATCH8	0.998	1
P2RY13	NAA25	0.998	1
P2RY13	BCORL1	0.998	1
P2RY13	TMEM126A	0.998	1
MVK	ATG5	0.998	1
ATXN3L	Del_10q25.2	0.998	1
DIP2B	EGR1	0.998	1
FBXW7	Del_7q31.1	0.998	1
RBMX	RBM44	0.998	1
ASXL1	KIAA1586	0.998	1
ASXL1	PLEKHF2	0.998	1
ASXL1	SLK	0.998	1
SMAD2	ROS1	0.998	1
SMAD2	NAA25	0.998	1
MPHOSPH10	BCL9	0.998	1
TPRKB	PTCH1	0.998	1
PLAGL2	IDH1	0.998	1
PLAGL2	SETD2	0.998	1
PLAGL2	ALPK2	0.998	1
PLAGL2	CTNNB1	0.998	1
PLAGL2	ECT2	0.998	1
PLAGL2	C14orf43	0.998	1
PLAGL2	KCTD3	0.998	1
IDH1	PTEN	0.998	1
SETD2	KIAA1586	0.998	1
SETD2	IQCD	0.998	1
SETD2	SLK	0.998	1
C11orf30	GMPS	0.998	1
C11orf30	MAP4K3	0.998	1
EGR1	ATM	0.998	1
EGR1	C15orf52	0.998	1
ROS1	PTEN	0.998	1
ROS1	SMAD4	0.998	1
RPTN	PTEN	0.998	1
RPTN	L1TD1	0.998	1
CTNNB1	KCTD3	0.998	1
PTEN	THOC7	0.998	1
PTEN	C14orf43	0.998	1
PTEN	PLEKHF2	0.998	1
PTEN	TMEM126A	0.998	1
RBM44	FKBP9	0.998	1
ECT2	BCL9	0.998	1
ECT2	ATM	0.998	1
DDX26B	NLRC4	0.998	1
DDX26B	ATP6V1B1	0.998	1
DDX26B	NAA25	0.998	1
UBQLN2	PTCH1	0.998	1
UBQLN2	IQCD	0.998	1
ALDH1A3	BCL9	0.998	1
ALDH1A3	ATM	0.998	1
ALDH1A3	HPS3	0.998	1
RB1	FKBP9	0.998	1
RB1	HPS3	0.998	1
TOP2B	LINGO4	0.998	1
TOP2B	MAP4K3	0.998	1
TOP2B	BCORL1	0.998	1
TOP2B	IDH2	0.998	1
TOP2B	PLXNA3	0.998	1
GMPS	PIK3R1	0.998	1
GMPS	C14orf184	0.998	1
KIAA1586	SLK	0.998	1
L1TD1	BCL9	0.998	1
L1TD1	SLK	0.998	1
NLRC4	SLC26A8	0.998	1
NLRC4	IQCD	0.998	1
DCLK2	MAP4K3	0.998	1
PTCH1	FKBP9	0.998	1
LINGO4	IQCD	0.998	1
LINGO4	Del_16q23.1	0.998	1
PIK3R1	PLXNA3	0.998	1
ATP6V1B1	PRPS1	0.998	1
CHD3	GRB2	0.998	1
CHD3	Del_16q23.1	0.998	1
PLEKHF2	BCORL1	0.998	1
FKBP9	CYLD	0.998	1
MAP4K3	SLK	0.998	1
PTGDR	Amp_16q12.1	0.998	1
BCORL1	GRB2	0.998	1
IDH2	Del_16q23.1	0.998	1
TMEM126A	Del_19p13.3	0.998	1
12q-Amp	Amp_8q24.21	0.998	1
12q-Amp	Amp_20p11.23	0.998	1
16p-Amp	14q-Del	0.998	1
16p-Amp	Amp_20q13.12	0.998	1
17q-Amp	Amp_11p15.5	0.998	1
17q-Amp	Amp_13q12.13	0.998	1
17q-Amp	Amp_19q13.11	0.998	1
17q-Amp	Amp_20p11.23	0.998	1
17q-Amp	Amp_20p11.21	0.998	1
20p-Amp	Amp_16q12.1	0.998	1
20p-Amp	Amp_17q12	0.998	1
20q-Amp	1p-Del	0.998	1
20q-Amp	22q-Del	0.998	1
20q-Amp	Del_1p33	0.998	1
20q-Amp	Del_4q22.1	0.998	1
7q-Amp	18q-Del	0.998	1
7q-Amp	Amp_16q12.1	0.998	1
8p-Amp	Amp_20p11.21	0.998	1
8q-Amp	Amp_5p13.2	0.998	1
8q-Amp	Del_17p12	0.998	1
8q-Amp	Del_18q22.1	0.998	1
14q-Del	Del_21q11.2	0.998	1
15q-Del	Del_17q24.3	0.998	1
17p-Del	5q-Del	0.998	1
17p-Del	Del_5q22.2	0.998	1
18p-Del	Amp_17q12	0.998	1
18p-Del	Amp_17q24.1	0.998	1
18p-Del	Del_1p33	0.998	1
18p-Del	Del_9p21.3	0.998	1
18p-Del	Del_19p13.3	0.998	1
18q-Del	Amp_8q24.21	0.998	1
1p-Del	Del_4q22.1	0.998	1
21q-Del	Del_8q11.1	0.998	1
21q-Del	Del_15q11.2	0.998	1
22q-Del	Amp_20q13.12	0.998	1
22q-Del	Del_21q11.2	0.998	1
4p-Del	Del_3q26.31	0.998	1
4p-Del	Del_10q21.1	0.998	1
4q-Del	Amp_20q11.21	0.998	1
5q-Del	Amp_20q13.12	0.998	1
5q-Del	Del_17p12	0.998	1
5q-Del	Del_18p11.31	0.998	1
8p-Del	Amp_13q12.13	0.998	1
Amp_5p13.2	Amp_20q12	0.998	1
Amp_5p13.2	Del_8p23.2	0.998	1
Amp_8q24.21	Amp_13q22.1	0.998	1
Amp_11p15.5	Amp_20p11.23	0.998	1
Amp_12p13.33	Del_10q25.2	0.998	1
Amp_13q22.1	Del_9p21.3	0.998	1
Amp_16p11.2	Del_8p23.2	0.998	1
Amp_16q12.1	Del_18q12.2	0.998	1
Amp_17q24.1	Amp_19q13.11	0.998	1
Amp_17q24.1	Del_12p13.2	0.998	1
Amp_20p11.23	Del_19p13.3	0.998	1
Amp_20p11.21	Del_15q11.2	0.998	1
Amp_20q12	Del_1p33	0.998	1
Amp_20q12	Del_1p13.1	0.998	1
Del_1p36.11	Del_10q23.31	0.998	1
Del_3p26.1	Del_15q11.2	0.998	1
Del_3p14.2	Del_16p13.3	0.998	1
Del_4q22.1	Del_5q22.2	0.998	1
Del_4q22.1	Del_15q22.33	0.998	1
Del_4q22.1	Del_18p11.31	0.998	1
Del_4q22.1	Del_21q11.2	0.998	1
Del_4q35.1	Del_5q21.1	0.998	1
Del_4q35.1	Del_16p13.3	0.998	1
Del_5q12.1	Del_14q31.1	0.998	1
Del_5q21.1	Del_10q23.31	0.998	1
Del_6q26	Del_22q13.32	0.998	1
Del_8p23.2	Del_12p13.2	0.998	1
Del_8p23.2	Del_17q24.3	0.998	1
Del_9p21.3	Del_18q21.2	0.998	1
Del_9p21.3	Del_18q22.1	0.998	1
Del_9p21.3	Del_21q11.2	0.998	1
Del_10q21.1	Del_16q23.1	0.998	1
Del_10q23.31	Del_15q15.2	0.998	1
Del_10q23.31	Del_18p11.31	0.998	1
Del_10q25.2	Del_17p12	0.998	1
Del_12p13.2	Del_14q31.1	0.998	1
Del_12p13.2	Del_18q12.2	0.998	1
Del_14q31.1	Del_19p13.3	0.998	1
Del_14q31.1	Del_21q11.2	0.998	1
Del_15q22.33	Del_17q24.3	0.998	1
Del_17q24.3	Del_18p11.31	0.998	1
APC	NF2	0.999	1
APC	NF1	0.999	1
APC	PTCH1	0.999	1
APC	15q-Del	0.999	1
APC	Del_15q22.33	0.999	1
APC	Del_18q12.2	0.999	1
ARID1A	SOX9	0.999	1
ARID1A	NTAN1	0.999	1
ARID1A	PRKDC	0.999	1
ARID1A	ZBTB20	0.999	1
ARID1A	PTEN	0.999	1
ARID1A	BCORL1	0.999	1
RNF43	NR1H3	0.999	1
RNF43	MPHOSPH10	0.999	1
RNF43	IDH1	0.999	1
RNF43	ALDH1A3	0.999	1
RNF43	NLRC4	0.999	1
TP53	SMAD4	0.999	1
TP53	7p-Amp	0.999	1
TP53	4p-Del	0.999	1
SOX9	FBXW7	0.999	1
SOX9	PCBP1	0.999	1
FAM123B	GMPS	0.999	1
FAM123B	KIAA1586	0.999	1
FAM123B	CYLD	0.999	1
TXNDC2	P2RY13	0.999	1
TXNDC2	GPATCH8	0.999	1
TXNDC2	C11orf30	0.999	1
TXNDC2	HPS3	0.999	1
TXNDC2	GGT1	0.999	1
B2M	RPTN	0.999	1
B2M	CTNNB1	0.999	1
B2M	C15orf52	0.999	1
BCOR	CRIPAK	0.999	1
BCOR	ATXN3L	0.999	1
BCOR	NLRC4	0.999	1
BCOR	C14orf43	0.999	1
BCOR	FKBP9	0.999	1
BCOR	KCTD3	0.999	1
CDH1	NTAN1	0.999	1
CDH1	MAPK6	0.999	1
CDH1	P2RY13	0.999	1
CDH1	IDH1	0.999	1
CDH1	DDX26B	0.999	1
CDH1	TOP2B	0.999	1
CDH1	NLRC4	0.999	1
CDH1	DCLK2	0.999	1
CDH1	PRPS1	0.999	1
MLH1	WNT1	0.999	1
MLH1	NF2	0.999	1
NTAN1	WNT1	0.999	1
NTAN1	IDH1	0.999	1
NTAN1	C11orf30	0.999	1
NTAN1	ROS1	0.999	1
NTAN1	ECT2	0.999	1
NTAN1	ATM	0.999	1
NTAN1	MAP4K3	0.999	1
ZFP36L2	MVK	0.999	1
ZFP36L2	ALG12	0.999	1
ZFP36L2	Del_10q25.2	0.999	1
WNT1	GPATCH8	0.999	1
WNT1	RB1	0.999	1
WNT1	LINGO4	0.999	1
WNT1	ATM	0.999	1
BMPR2	MAPK6	0.999	1
BMPR2	CTNNB1	0.999	1
BMPR2	UBQLN2	0.999	1
BMPR2	KIAA1586	0.999	1
BMPR2	NAA25	0.999	1
BMPR2	HPS3	0.999	1
BMPR2	BCORL1	0.999	1
SELPLG	DCLK2	0.999	1
KDM6A	NF1	0.999	1
KDM6A	GMPS	0.999	1
KDM6A	ATM	0.999	1
KDM6A	PRPS1	0.999	1
KDM6A	SLK	0.999	1
MAPK6	FBXW7	0.999	1
MAPK6	TPRKB	0.999	1
MAPK6	ALDH1A3	0.999	1
MAPK6	KIAA1586	0.999	1
MAPK6	C14orf43	0.999	1
MAPK6	PLEKHF2	0.999	1
FMN2	ALG12	0.999	1
FMN2	ALPK2	0.999	1
FMN2	C11orf30	0.999	1
FMN2	PTCH1	0.999	1
FMN2	PIK3R1	0.999	1
FMN2	BCL9	0.999	1
FMN2	PCBP1	0.999	1
FMN2	1q-Amp	0.999	1
STARD3NL	NF1	0.999	1
STARD3NL	MGA	0.999	1
STARD3NL	DIP2B	0.999	1
STARD3NL	SETD2	0.999	1
STARD3NL	RBM44	0.999	1
STARD3NL	NLRC4	0.999	1
STARD3NL	PTCH1	0.999	1
STARD3NL	SLC26A8	0.999	1
STARD3NL	CHD3	0.999	1
STARD3NL	BCORL1	0.999	1
NF2	PLAGL2	0.999	1
NF2	GPATCH8	0.999	1
NF2	SETD2	0.999	1
NF1	SETD2	0.999	1
NF1	RPTN	0.999	1
NF1	NLRC4	0.999	1
NF1	SLC26A8	0.999	1
NF1	CYLD	0.999	1
NF1	GRB2	0.999	1
OR4D10	GPATCH8	0.999	1
OR4D10	PTCH1	0.999	1
OR4D10	CHD3	0.999	1
OR4D10	CYLD	0.999	1
PRKDC	DIP2B	0.999	1
PRKDC	FBXW7	0.999	1
PRKDC	RBMX	0.999	1
PRKDC	ALPK2	0.999	1
PRKDC	ECT2	0.999	1
PRKDC	DDX26B	0.999	1
PRKDC	NLRC4	0.999	1
PRKDC	C14orf43	0.999	1
PRKDC	PIK3R1	0.999	1
PRKDC	NAA25	0.999	1
PRKDC	RLIM	0.999	1
PRKDC	MAP4K3	0.999	1
MGA	MVK	0.999	1
MGA	ATXN3L	0.999	1
MGA	ZBTB20	0.999	1
MGA	MPHOSPH10	0.999	1
MGA	UBQLN2	0.999	1
MGA	RB1	0.999	1
MGA	TOP2B	0.999	1
MGA	DCLK2	0.999	1
MGA	LINGO4	0.999	1
MGA	NAA25	0.999	1
MGA	IQCD	0.999	1
MGA	FKBP9	0.999	1
MGA	GRB2	0.999	1
MGA	PLXNA3	0.999	1
P2RY13	ALPK2	0.999	1
P2RY13	ROS1	0.999	1
P2RY13	RPTN	0.999	1
P2RY13	DCLK2	0.999	1
P2RY13	CYLD	0.999	1
P2RY13	C15orf52	0.999	1
MVK	GPATCH8	0.999	1
MVK	ROS1	0.999	1
MVK	NLRC4	0.999	1
MVK	PTCH1	0.999	1
MVK	C15orf52	0.999	1
MVK	SLK	0.999	1
ATXN3L	LINGO4	0.999	1
ATXN3L	FKBP9	0.999	1
ATXN3L	PLXNA3	0.999	1
DIP2B	ASXL1	0.999	1
DIP2B	ZBTB20	0.999	1
DIP2B	CHD3	0.999	1
DIP2B	FKBP9	0.999	1
FBXW7	RBMX	0.999	1
FBXW7	TPRKB	0.999	1
FBXW7	PTCH1	0.999	1
RBMX	MAP4K3	0.999	1
ASXL1	ROS1	0.999	1
ASXL1	RB1	0.999	1
ASXL1	TOP2B	0.999	1
ASXL1	BCL9	0.999	1
ASXL1	SLC26A8	0.999	1
ASXL1	KCTD3	0.999	1
ASXL1	IDH2	0.999	1
ALG12	GPATCH8	0.999	1
ALG12	ATP6V1B1	0.999	1
ZBTB20	EGR1	0.999	1
ZBTB20	ALDH1A3	0.999	1
ZBTB20	LINGO4	0.999	1
ZBTB20	C14orf43	0.999	1
ZBTB20	MAP4K3	0.999	1
ZBTB20	BCORL1	0.999	1
MPHOSPH10	KIAA1586	0.999	1
MPHOSPH10	PTCH1	0.999	1
TPRKB	FKBP9	0.999	1
PLAGL2	SLC26A8	0.999	1
GPATCH8	RB1	0.999	1
GPATCH8	NLRC4	0.999	1
GPATCH8	PTCH1	0.999	1
GPATCH8	ATP6V1B1	0.999	1
GPATCH8	BCL9	0.999	1
GPATCH8	CHD3	0.999	1
GPATCH8	RLIM	0.999	1
GPATCH8	BCORL1	0.999	1
GPATCH8	SLK	0.999	1
IDH1	C2orf29	0.999	1
IDH1	PLXNA3	0.999	1
SETD2	C11orf30	0.999	1
SETD2	RB1	0.999	1
SETD2	PTCH1	0.999	1
SETD2	SLC26A8	0.999	1
SETD2	C15orf52	0.999	1
ALPK2	NLRC4	0.999	1
ALPK2	PIK3R1	0.999	1
ALPK2	BCL9	0.999	1
ALPK2	CHD3	0.999	1
ALPK2	ATG5	0.999	1
C11orf30	DDX26B	0.999	1
C11orf30	PLEKHF2	0.999	1
EGR1	SLK	0.999	1
ROS1	DDX26B	0.999	1
ROS1	GMPS	0.999	1
ROS1	C14orf43	0.999	1
ROS1	NAA25	0.999	1
ROS1	PTGDR	0.999	1
RPTN	CTNNB1	0.999	1
RPTN	SMAD4	0.999	1
CTNNB1	DDX26B	0.999	1
CTNNB1	KIAA1586	0.999	1
CTNNB1	PIK3R1	0.999	1
PTEN	TOP2B	0.999	1
PTEN	GGT1	0.999	1
PTEN	PRPS1	0.999	1
PTEN	KCTD3	0.999	1
RBM44	NAA25	0.999	1
ECT2	UBQLN2	0.999	1
ECT2	PLEKHF2	0.999	1
ECT2	FKBP9	0.999	1
ECT2	KCTD3	0.999	1
ECT2	PLXNA3	0.999	1
DDX26B	TOP2B	0.999	1
DDX26B	PIK3R1	0.999	1
DDX26B	BCL9	0.999	1
DDX26B	C15orf52	0.999	1
UBQLN2	FKBP9	0.999	1
UBQLN2	KCTD3	0.999	1
ALDH1A3	L1TD1	0.999	1
ALDH1A3	LINGO4	0.999	1
ALDH1A3	C14orf43	0.999	1
RB1	PIK3R1	0.999	1
RB1	SLK	0.999	1
TOP2B	Del_16q23.1	0.999	1
GMPS	MAP4K3	0.999	1
KIAA1586	L1TD1	0.999	1
KIAA1586	BCL9	0.999	1
KIAA1586	HPS3	0.999	1
KIAA1586	CYLD	0.999	1
KIAA1586	ATG5	0.999	1
L1TD1	KCTD3	0.999	1
NLRC4	PIK3R1	0.999	1
NLRC4	ATP6V1B1	0.999	1
NLRC4	PRPS1	0.999	1
C2orf29	ATM	0.999	1
PTCH1	BCL9	0.999	1
PTCH1	CHD3	0.999	1
LINGO4	HPS3	0.999	1
LINGO4	KCTD3	0.999	1
LINGO4	IDH2	0.999	1
C14orf43	FKBP9	0.999	1
C14orf43	MAP4K3	0.999	1
C14orf43	KCTD3	0.999	1
PIK3R1	SLC26A8	0.999	1
PIK3R1	PRPS1	0.999	1
PIK3R1	BCORL1	0.999	1
ATP6V1B1	NAA25	0.999	1
ATP6V1B1	BCORL1	0.999	1
ATP6V1B1	Del_7q31.1	0.999	1
BCL9	ATM	0.999	1
BCL9	GRB2	0.999	1
NAA25	ATM	0.999	1
CHD3	HPS3	0.999	1
CHD3	PRPS1	0.999	1
PLEKHF2	PLXNA3	0.999	1
ATM	MAP4K3	0.999	1
ATM	C15orf52	0.999	1
ATM	SLK	0.999	1
FKBP9	KCTD3	0.999	1
GGT1	Del_18q12.2	0.999	1
GGT1	Del_18q21.2	0.999	1
GGT1	Del_18q22.1	0.999	1
MAP4K3	KCTD3	0.999	1
MAP4K3	PLXNA3	0.999	1
MAP4K3	C15orf52	0.999	1
KCTD3	PLXNA3	0.999	1
TMEM126A	Del_3q26.31	0.999	1
12q-Amp	7p-Amp	0.999	1
13q-Amp	16p-Amp	0.999	1
13q-Amp	22q-Del	0.999	1
16p-Amp	20p-Amp	0.999	1
16p-Amp	20q-Amp	0.999	1
16p-Amp	4p-Del	0.999	1
16p-Amp	Amp_20q11.21	0.999	1
16p-Amp	Amp_20q12	0.999	1
16p-Amp	Del_8p23.2	0.999	1
16p-Amp	Del_19p13.3	0.999	1
17q-Amp	18p-Del	0.999	1
17q-Amp	Amp_8q24.21	0.999	1
17q-Amp	Del_8p22	0.999	1
20p-Amp	Amp_11p15.5	0.999	1
20q-Amp	Amp_5p13.2	0.999	1
20q-Amp	Del_15q15.2	0.999	1
20q-Amp	Del_21q11.2	0.999	1
7p-Amp	Del_7q31.1	0.999	1
7p-Amp	Del_9p21.3	0.999	1
7p-Amp	Del_17p12	0.999	1
7q-Amp	Amp_17p11.2	0.999	1
7q-Amp	Del_18q21.2	0.999	1
8p-Amp	Amp_20p11.23	0.999	1
8q-Amp	5q-Del	0.999	1
8q-Amp	Amp_17q12	0.999	1
8q-Amp	Del_18q12.2	0.999	1
14q-Del	4q-Del	0.999	1
14q-Del	8p-Del	0.999	1
14q-Del	Amp_20p11.21	0.999	1
14q-Del	Del_1p33	0.999	1
14q-Del	Del_1p13.1	0.999	1
15q-Del	4p-Del	0.999	1
15q-Del	Amp_20p11.21	0.999	1
15q-Del	Del_3p26.1	0.999	1
15q-Del	Del_4q22.1	0.999	1
17p-Del	21q-Del	0.999	1
17p-Del	8p-Del	0.999	1
17p-Del	Amp_20p11.21	0.999	1
17p-Del	Del_3p26.1	0.999	1
17p-Del	Del_5q21.1	0.999	1
17p-Del	Del_6q26	0.999	1
17p-Del	Del_8q11.1	0.999	1
17p-Del	Del_10q21.1	0.999	1
17p-Del	Del_12p13.2	0.999	1
18p-Del	Amp_16q12.1	0.999	1
18p-Del	Del_10q21.1	0.999	1
18p-Del	Del_10q23.31	0.999	1
18q-Del	Del_1p33	0.999	1
18q-Del	Del_10q23.31	0.999	1
18q-Del	Del_12p13.2	0.999	1
1p-Del	Del_6q26	0.999	1
1p-Del	Del_8q11.1	0.999	1
1p-Del	Del_17p12	0.999	1
1p-Del	Del_18p11.31	0.999	1
21q-Del	Del_9p21.3	0.999	1
21q-Del	Del_15q22.33	0.999	1
21q-Del	Del_17p12	0.999	1
21q-Del	Del_22q13.32	0.999	1
22q-Del	Amp_11p15.5	0.999	1
22q-Del	Del_3p26.1	0.999	1
22q-Del	Del_19p13.3	0.999	1
4p-Del	Amp_13q22.1	0.999	1
4p-Del	Amp_20q11.21	0.999	1
4p-Del	Del_1p36.11	0.999	1
4p-Del	Del_3p14.2	0.999	1
4p-Del	Del_5q22.2	0.999	1
4p-Del	Del_15q15.2	0.999	1
4p-Del	Del_15q21.1	0.999	1
4q-Del	8p-Del	0.999	1
4q-Del	Amp_20q13.12	0.999	1
4q-Del	Del_5q22.2	0.999	1
5q-Del	Amp_8p11.21	0.999	1
5q-Del	Amp_20q11.21	0.999	1
5q-Del	Amp_20q12	0.999	1
5q-Del	Del_4q35.1	0.999	1
5q-Del	Del_8p22	0.999	1
5q-Del	Del_18q22.1	0.999	1
5q-Del	Del_19p13.3	0.999	1
8p-Del	Del_8q11.1	0.999	1
8p-Del	Del_18p11.31	0.999	1
Amp_5p13.2	Amp_8p11.21	0.999	1
Amp_5p13.2	Amp_8q24.21	0.999	1
Amp_5p13.2	Amp_16q12.1	0.999	1
Amp_5p13.2	Del_5q21.1	0.999	1
Amp_6p21.1	Del_3p26.1	0.999	1
Amp_8q24.21	Amp_19q13.11	0.999	1
Amp_8q24.21	Del_17p12	0.999	1
Amp_8q24.21	Del_18q21.2	0.999	1
Amp_11p15.5	Amp_20q12	0.999	1
Amp_11p15.5	Amp_20q13.12	0.999	1
Amp_11p15.5	Del_10q21.1	0.999	1
Amp_12p13.33	Del_16p13.3	0.999	1
Amp_13q12.13	Amp_16p11.2	0.999	1
Amp_13q12.13	Del_3p26.1	0.999	1
Amp_13q12.13	Del_15q15.2	0.999	1
Amp_13q12.13	Del_15q22.33	0.999	1
Amp_13q12.13	Del_22q13.32	0.999	1
Amp_13q22.1	Del_1p13.1	0.999	1
Amp_13q22.1	Del_12p13.2	0.999	1
Amp_13q22.1	Del_15q11.2	0.999	1
Amp_13q22.1	Del_22q13.32	0.999	1
Amp_16p11.2	Del_14q31.1	0.999	1
Amp_16q12.1	Amp_20p11.21	0.999	1
Amp_16q12.1	Amp_20q11.21	0.999	1
Amp_16q12.1	Del_14q31.1	0.999	1
Amp_16q12.1	Del_18p11.31	0.999	1
Amp_16q12.1	Del_18q21.2	0.999	1
Amp_17q12	Amp_19q13.11	0.999	1
Amp_17q12	Amp_20p11.23	0.999	1
Amp_17q12	Amp_20p11.21	0.999	1
Amp_17q12	Del_12p13.2	0.999	1
Amp_17q24.1	Del_8p22	0.999	1
Amp_17q24.1	Del_18q22.1	0.999	1
Amp_20p11.23	Del_4q35.1	0.999	1
Amp_20p11.23	Del_17p12	0.999	1
Amp_20p11.21	Del_4q35.1	0.999	1
Amp_20q11.21	Del_4q22.1	0.999	1
Amp_20q11.21	Del_21q11.2	0.999	1
Amp_20q13.12	Del_15q21.1	0.999	1
Del_1p36.11	Del_4q35.1	0.999	1
Del_1p36.11	Del_5q22.2	0.999	1
Del_1p36.11	Del_8p23.2	0.999	1
Del_1p36.11	Del_10q21.1	0.999	1
Del_1p36.11	Del_12p13.2	0.999	1
Del_1p36.11	Del_16p13.3	0.999	1
Del_1p33	Del_3p26.1	0.999	1
Del_1p33	Del_4q22.1	0.999	1
Del_1p33	Del_9p21.3	0.999	1
Del_1p13.1	Del_3p26.1	0.999	1
Del_1p13.1	Del_5q12.1	0.999	1
Del_1p13.1	Del_8q11.1	0.999	1
Del_1p13.1	Del_10q21.1	0.999	1
Del_1p13.1	Del_15q11.2	0.999	1
Del_3p26.1	Del_4q22.1	0.999	1
Del_3p26.1	Del_16p13.3	0.999	1
Del_3p14.2	Del_4q22.1	0.999	1
Del_3q26.31	Del_4q22.1	0.999	1
Del_3q26.31	Del_4q35.1	0.999	1
Del_3q26.31	Del_7q31.1	0.999	1
Del_3q26.31	Del_19p13.3	0.999	1
Del_4q22.1	Del_10q21.1	0.999	1
Del_4q22.1	Del_14q31.1	0.999	1
Del_4q22.1	Del_19p13.3	0.999	1
Del_4q35.1	Del_6q26	0.999	1
Del_5q12.1	Del_6q26	0.999	1
Del_5q12.1	Del_8p22	0.999	1
Del_5q12.1	Del_16p13.3	0.999	1
Del_5q12.1	Del_17p12	0.999	1
Del_5q12.1	Del_19p13.3	0.999	1
Del_5q21.1	Del_8p23.2	0.999	1
Del_5q21.1	Del_8p22	0.999	1
Del_5q21.1	Del_18p11.31	0.999	1
Del_6p25.3	Del_6q26	0.999	1
Del_6q26	Del_9p21.3	0.999	1
Del_6q26	Del_14q31.1	0.999	1
Del_6q26	Del_16p13.3	0.999	1
Del_6q26	Del_19p13.3	0.999	1
Del_8p22	Del_17q24.3	0.999	1
Del_8p22	Del_19p13.3	0.999	1
Del_8q11.1	Del_14q31.1	0.999	1
Del_8q11.1	Del_15q11.2	0.999	1
Del_8q11.1	Del_17p12	0.999	1
Del_8q11.1	Del_19p13.3	0.999	1
Del_9p21.3	Del_17p12	0.999	1
Del_10q21.1	Del_18p11.31	0.999	1
Del_10q21.1	Del_18q21.2	0.999	1
Del_10q23.31	Del_17p12	0.999	1
Del_10q23.31	Del_18q12.2	0.999	1
Del_10q25.2	Del_15q15.2	0.999	1
Del_10q25.2	Del_18q21.2	0.999	1
Del_10q25.2	Del_18q22.1	0.999	1
Del_15q11.2	Del_17q24.3	0.999	1
Del_15q11.2	Del_21q11.2	0.999	1
Del_17q24.3	Del_22q13.32	0.999	1
Del_21q11.2	Del_22q13.32	0.999	1
APC	STARD3NL	1	1
APC	OR4D10	1	1
APC	ALG12	1	1
APC	TPRKB	1	1
APC	PLAGL2	1	1
APC	PTEN	1	1
APC	C14orf184	1	1
APC	PLEKHF2	1	1
APC	GGT1	1	1
APC	ATG5	1	1
APC	PRPS1	1	1
APC	TMEM126A	1	1
APC	PCBP1	1	1
APC	5q-Del	1	1
APC	Amp_17p11.2	1	1
APC	Del_7q31.1	1	1
APC	Del_12p13.2	1	1
APC	Del_18q21.2	1	1
ARID1A	RNF43	1	1
ARID1A	BCOR	1	1
ARID1A	CDH1	1	1
ARID1A	BMPR2	1	1
ARID1A	STARD3NL	1	1
ARID1A	NF2	1	1
ARID1A	NF1	1	1
ARID1A	MGA	1	1
ARID1A	MVK	1	1
ARID1A	PLAGL2	1	1
ARID1A	ALPK2	1	1
ARID1A	C11orf30	1	1
ARID1A	EGR1	1	1
ARID1A	ROS1	1	1
ARID1A	RPTN	1	1
ARID1A	DDX26B	1	1
ARID1A	RB1	1	1
ARID1A	L1TD1	1	1
ARID1A	C2orf29	1	1
ARID1A	BCL9	1	1
ARID1A	SLC26A8	1	1
ARID1A	CHD3	1	1
ARID1A	ATM	1	1
ARID1A	PLXNA3	1	1
RNF43	BCOR	1	1
RNF43	MLH1	1	1
RNF43	NTAN1	1	1
RNF43	ZFP36L2	1	1
RNF43	WNT1	1	1
RNF43	BMPR2	1	1
RNF43	FMN2	1	1
RNF43	PRKDC	1	1
RNF43	MGA	1	1
RNF43	MVK	1	1
RNF43	ZBTB20	1	1
RNF43	PLAGL2	1	1
RNF43	GPATCH8	1	1
RNF43	ALPK2	1	1
RNF43	EGR1	1	1
RNF43	ROS1	1	1
RNF43	PTEN	1	1
RNF43	RBM44	1	1
RNF43	DDX26B	1	1
RNF43	UBQLN2	1	1
RNF43	TOP2B	1	1
RNF43	PTCH1	1	1
RNF43	LINGO4	1	1
RNF43	C14orf43	1	1
RNF43	BCL9	1	1
RNF43	SLC26A8	1	1
RNF43	CHD3	1	1
RNF43	ATM	1	1
RNF43	FKBP9	1	1
RNF43	MAP4K3	1	1
RNF43	KCTD3	1	1
RNF43	BCORL1	1	1
RNF43	PLXNA3	1	1
RNF43	C15orf52	1	1
TP53	PLAGL2	1	1
TP53	RB1	1	1
TP53	C14orf184	1	1
TP53	PTGDR	1	1
TP53	20q-Amp	1	1
TP53	17p-Del	1	1
TP53	18p-Del	1	1
TP53	18q-Del	1	1
TP53	8p-Del	1	1
TP53	Amp_8q24.21	1	1
TP53	Amp_13q12.13	1	1
TP53	Amp_13q22.1	1	1
TP53	Amp_20p11.21	1	1
TP53	Amp_20q11.21	1	1
TP53	Amp_20q12	1	1
TP53	Amp_20q13.12	1	1
TP53	Del_8p23.2	1	1
TP53	Del_8p22	1	1
TP53	Del_17p12	1	1
TP53	Del_18p11.31	1	1
TP53	Del_18q12.2	1	1
TP53	Del_18q21.2	1	1
TP53	Del_18q22.1	1	1
SOX9	FAM123B	1	1
FAM123B	BMPR2	1	1
FAM123B	ALPK2	1	1
FAM123B	PIK3R1	1	1
ACVR1B	B2M	1	1
ACVR1B	NR1H3	1	1
B2M	PRKDC	1	1
B2M	RBMX	1	1
B2M	ASXL1	1	1
B2M	ZBTB20	1	1
B2M	RBM44	1	1
B2M	DDX26B	1	1
B2M	KIAA1586	1	1
B2M	L1TD1	1	1
B2M	SLC26A8	1	1
B2M	CHD3	1	1
B2M	ATM	1	1
B2M	FKBP9	1	1
B2M	MAP4K3	1	1
B2M	KCTD3	1	1
BCOR	CDH1	1	1
BCOR	ZFP36L2	1	1
BCOR	BMPR2	1	1
BCOR	MGA	1	1
BCOR	DIP2B	1	1
BCOR	ZBTB20	1	1
BCOR	ROS1	1	1
BCOR	RB1	1	1
BCOR	LINGO4	1	1
BCOR	NAA25	1	1
BCOR	IQCD	1	1
CDH1	MLH1	1	1
CDH1	ZFP36L2	1	1
CDH1	BMPR2	1	1
CDH1	FMN2	1	1
CDH1	STARD3NL	1	1
CDH1	NF2	1	1
CDH1	NF1	1	1
CDH1	PRKDC	1	1
CDH1	ATXN3L	1	1
CDH1	PLAGL2	1	1
CDH1	SETD2	1	1
CDH1	ALPK2	1	1
CDH1	ROS1	1	1
CDH1	RPTN	1	1
CDH1	CTNNB1	1	1
CDH1	PTEN	1	1
CDH1	RB1	1	1
CDH1	PTCH1	1	1
CDH1	C14orf43	1	1
CDH1	ATM	1	1
CDH1	PLXNA3	1	1
CDH1	SMAD4	1	1
MLH1	NF1	1	1
MLH1	PRKDC	1	1
MLH1	MVK	1	1
MLH1	CTNNB1	1	1
MLH1	PTEN	1	1
MLH1	RB1	1	1
MLH1	NLRC4	1	1
MLH1	PTCH1	1	1
MLH1	SMAD4	1	1
NTAN1	BMPR2	1	1
NTAN1	FMN2	1	1
NTAN1	NF1	1	1
NTAN1	PRKDC	1	1
NTAN1	MGA	1	1
NTAN1	MVK	1	1
NTAN1	PLAGL2	1	1
NTAN1	SETD2	1	1
NTAN1	ALPK2	1	1
NTAN1	EGR1	1	1
NTAN1	CTNNB1	1	1
NTAN1	TOP2B	1	1
NTAN1	BCL9	1	1
NTAN1	NAA25	1	1
NTAN1	SLC26A8	1	1
NTAN1	KCTD3	1	1
NTAN1	PLXNA3	1	1
ZFP36L2	ZBTB20	1	1
WNT1	FMN2	1	1
WNT1	MVK	1	1
WNT1	ALG12	1	1
WNT1	PLAGL2	1	1
WNT1	IDH1	1	1
WNT1	EGR1	1	1
WNT1	ROS1	1	1
WNT1	TOP2B	1	1
WNT1	C14orf43	1	1
WNT1	PRPS1	1	1
WNT1	KCTD3	1	1
BMPR2	PRKDC	1	1
BMPR2	MGA	1	1
BMPR2	MVK	1	1
BMPR2	DIP2B	1	1
BMPR2	FBXW7	1	1
BMPR2	ZBTB20	1	1
BMPR2	PLAGL2	1	1
BMPR2	GPATCH8	1	1
BMPR2	SETD2	1	1
BMPR2	ALPK2	1	1
BMPR2	C11orf30	1	1
BMPR2	ROS1	1	1
BMPR2	PTEN	1	1
BMPR2	DDX26B	1	1
BMPR2	ALDH1A3	1	1
BMPR2	TOP2B	1	1
BMPR2	GMPS	1	1
BMPR2	L1TD1	1	1
BMPR2	PTCH1	1	1
BMPR2	LINGO4	1	1
BMPR2	C14orf43	1	1
BMPR2	CHD3	1	1
BMPR2	ATM	1	1
BMPR2	MAP4K3	1	1
BMPR2	KCTD3	1	1
BMPR2	PLXNA3	1	1
BMPR2	C15orf52	1	1
SELPLG	CTNNB1	1	1
SELPLG	PTEN	1	1
SELPLG	PTCH1	1	1
SELPLG	ATM	1	1
CRIPAK	SMAD4	1	1
KDM6A	FMN2	1	1
KDM6A	TPRKB	1	1
KDM6A	PTEN	1	1
KDM6A	RB1	1	1
KDM6A	C2orf29	1	1
KDM6A	PTCH1	1	1
MAPK6	OR4D10	1	1
MAPK6	GPATCH8	1	1
MAPK6	ALPK2	1	1
MAPK6	ROS1	1	1
MAPK6	RPTN	1	1
MAPK6	CTNNB1	1	1
MAPK6	RB1	1	1
MAPK6	HPS3	1	1
MAPK6	RLIM	1	1
MAPK6	SLK	1	1
RHOA	STARD3NL	1	1
FMN2	NF1	1	1
FMN2	PRKDC	1	1
FMN2	MVK	1	1
FMN2	PLAGL2	1	1
FMN2	SETD2	1	1
FMN2	PTEN	1	1
FMN2	RBM44	1	1
FMN2	DDX26B	1	1
FMN2	RB1	1	1
FMN2	TOP2B	1	1
FMN2	SLC26A8	1	1
FMN2	ATM	1	1
FMN2	MAP4K3	1	1
FMN2	KCTD3	1	1
FMN2	BCORL1	1	1
FMN2	PLXNA3	1	1
STARD3NL	NF2	1	1
STARD3NL	ALPK2	1	1
STARD3NL	CTNNB1	1	1
STARD3NL	L1TD1	1	1
STARD3NL	BCL9	1	1
NF2	NF1	1	1
NF2	PRKDC	1	1
NF2	ZBTB20	1	1
NF2	ALPK2	1	1
NF2	ROS1	1	1
NF2	RPTN	1	1
NF2	CTNNB1	1	1
NF2	PTEN	1	1
NF2	DDX26B	1	1
NF2	RB1	1	1
NF2	TOP2B	1	1
NF2	PTCH1	1	1
NF2	PIK3R1	1	1
NF2	ATM	1	1
NF2	SMAD4	1	1
NF1	PRKDC	1	1
NF1	MGA	1	1
NF1	DIP2B	1	1
NF1	TPRKB	1	1
NF1	PLAGL2	1	1
NF1	ALPK2	1	1
NF1	ROS1	1	1
NF1	CTNNB1	1	1
NF1	PTEN	1	1
NF1	DDX26B	1	1
NF1	RB1	1	1
NF1	TOP2B	1	1
NF1	C2orf29	1	1
NF1	PTCH1	1	1
NF1	PIK3R1	1	1
NF1	C14orf184	1	1
NF1	ATM	1	1
NF1	FKBP9	1	1
NF1	GGT1	1	1
NF1	PRPS1	1	1
NF1	PLXNA3	1	1
NF1	SMAD4	1	1
OR4D10	PRKDC	1	1
OR4D10	ASXL1	1	1
OR4D10	C11orf30	1	1
OR4D10	ROS1	1	1
OR4D10	CTNNB1	1	1
OR4D10	KIAA1586	1	1
PRKDC	MGA	1	1
PRKDC	ASXL1	1	1
PRKDC	ZBTB20	1	1
PRKDC	MPHOSPH10	1	1
PRKDC	GPATCH8	1	1
PRKDC	SETD2	1	1
PRKDC	C11orf30	1	1
PRKDC	EGR1	1	1
PRKDC	ROS1	1	1
PRKDC	CTNNB1	1	1
PRKDC	PTEN	1	1
PRKDC	RBM44	1	1
PRKDC	RB1	1	1
PRKDC	TOP2B	1	1
PRKDC	KIAA1586	1	1
PRKDC	L1TD1	1	1
PRKDC	PTCH1	1	1
PRKDC	BCL9	1	1
PRKDC	SLC26A8	1	1
PRKDC	CHD3	1	1
PRKDC	ATM	1	1
PRKDC	FKBP9	1	1
PRKDC	CYLD	1	1
PRKDC	KCTD3	1	1
PRKDC	BCORL1	1	1
PRKDC	C15orf52	1	1
PRKDC	SLK	1	1
MGA	TPRKB	1	1
MGA	SETD2	1	1
MGA	ALPK2	1	1
MGA	C11orf30	1	1
MGA	ROS1	1	1
MGA	RBM44	1	1
MGA	L1TD1	1	1
MGA	NLRC4	1	1
MGA	PTCH1	1	1
MGA	BCL9	1	1
MGA	SLC26A8	1	1
MGA	CHD3	1	1
MGA	ATM	1	1
MGA	CYLD	1	1
MGA	PTGDR	1	1
MGA	BCORL1	1	1
MGA	C15orf52	1	1
MGA	SLK	1	1
P2RY13	RBMX	1	1
P2RY13	C11orf30	1	1
P2RY13	DDX26B	1	1
P2RY13	ALDH1A3	1	1
P2RY13	RB1	1	1
P2RY13	GMPS	1	1
P2RY13	KIAA1586	1	1
P2RY13	C14orf43	1	1
P2RY13	ATM	1	1
P2RY13	FKBP9	1	1
P2RY13	MAP4K3	1	1
MVK	RBMX	1	1
MVK	ZBTB20	1	1
MVK	ALPK2	1	1
MVK	RBM44	1	1
MVK	DDX26B	1	1
MVK	UBQLN2	1	1
MVK	C14orf43	1	1
MVK	ATP6V1B1	1	1
MVK	SLC26A8	1	1
MVK	MAP4K3	1	1
MVK	BCORL1	1	1
MVK	PLXNA3	1	1
DIP2B	C11orf30	1	1
DIP2B	ROS1	1	1
DIP2B	CTNNB1	1	1
DIP2B	RBM44	1	1
DIP2B	L1TD1	1	1
DIP2B	PIK3R1	1	1
DIP2B	NAA25	1	1
DIP2B	CYLD	1	1
FBXW7	PTEN	1	1
FBXW7	C14orf43	1	1
FBXW7	ATM	1	1
RBMX	SLC26A8	1	1
ASXL1	SETD2	1	1
ASXL1	CTNNB1	1	1
ASXL1	PTEN	1	1
ASXL1	PTCH1	1	1
ASXL1	CYLD	1	1
ALG12	PLAGL2	1	1
ALG12	CHD3	1	1
ALG12	PRPS1	1	1
ALG12	PLXNA3	1	1
NR1H3	DDX26B	1	1
NR1H3	C14orf43	1	1
NR1H3	PLXNA3	1	1
ZBTB20	ROS1	1	1
ZBTB20	CTNNB1	1	1
ZBTB20	DDX26B	1	1
ZBTB20	UBQLN2	1	1
ZBTB20	BCL9	1	1
ZBTB20	CHD3	1	1
ZBTB20	ATM	1	1
ZBTB20	KCTD3	1	1
ZBTB20	GRB2	1	1
ZBTB20	PLXNA3	1	1
ZBTB20	C15orf52	1	1
MPHOSPH10	PLAGL2	1	1
MPHOSPH10	GPATCH8	1	1
MPHOSPH10	SETD2	1	1
MPHOSPH10	ALPK2	1	1
MPHOSPH10	C11orf30	1	1
MPHOSPH10	EGR1	1	1
MPHOSPH10	ROS1	1	1
MPHOSPH10	PIK3R1	1	1
MPHOSPH10	CHD3	1	1
TPRKB	PTEN	1	1
TPRKB	RB1	1	1
TPRKB	ATM	1	1
TPRKB	CYLD	1	1
PLAGL2	GPATCH8	1	1
PLAGL2	EGR1	1	1
PLAGL2	DDX26B	1	1
PLAGL2	RB1	1	1
PLAGL2	TOP2B	1	1
PLAGL2	PTCH1	1	1
PLAGL2	PLEKHF2	1	1
PLAGL2	ATM	1	1
PLAGL2	PRPS1	1	1
PLAGL2	BCORL1	1	1
PLAGL2	PLXNA3	1	1
GPATCH8	ALPK2	1	1
GPATCH8	C11orf30	1	1
GPATCH8	ROS1	1	1
GPATCH8	RBM44	1	1
GPATCH8	DDX26B	1	1
GPATCH8	UBQLN2	1	1
GPATCH8	KIAA1586	1	1
GPATCH8	C14orf43	1	1
GPATCH8	ATM	1	1
GPATCH8	HPS3	1	1
GPATCH8	PRPS1	1	1
GPATCH8	PLXNA3	1	1
SETD2	ALPK2	1	1
SETD2	ATM	1	1
SETD2	PLXNA3	1	1
ALPK2	EGR1	1	1
ALPK2	ROS1	1	1
ALPK2	CTNNB1	1	1
ALPK2	PTEN	1	1
ALPK2	RBM44	1	1
ALPK2	RB1	1	1
ALPK2	GMPS	1	1
ALPK2	L1TD1	1	1
ALPK2	C2orf29	1	1
ALPK2	C14orf43	1	1
ALPK2	SLC26A8	1	1
ALPK2	IQCD	1	1
ALPK2	ATM	1	1
ALPK2	FKBP9	1	1
ALPK2	HPS3	1	1
ALPK2	MAP4K3	1	1
ALPK2	KCTD3	1	1
ALPK2	PLXNA3	1	1
C11orf30	ROS1	1	1
C11orf30	RBM44	1	1
C11orf30	TOP2B	1	1
C11orf30	KIAA1586	1	1
C11orf30	PIK3R1	1	1
C11orf30	FKBP9	1	1
C11orf30	HPS3	1	1
EGR1	CTNNB1	1	1
EGR1	TOP2B	1	1
EGR1	C14orf43	1	1
EGR1	SLC26A8	1	1
EGR1	FKBP9	1	1
EGR1	MAP4K3	1	1
EGR1	KCTD3	1	1
EGR1	PLXNA3	1	1
ROS1	CTNNB1	1	1
ROS1	RBM44	1	1
ROS1	ALDH1A3	1	1
ROS1	RB1	1	1
ROS1	TOP2B	1	1
ROS1	KIAA1586	1	1
ROS1	L1TD1	1	1
ROS1	NLRC4	1	1
ROS1	DCLK2	1	1
ROS1	PTCH1	1	1
ROS1	LINGO4	1	1
ROS1	BCL9	1	1
ROS1	SLC26A8	1	1
ROS1	ATM	1	1
ROS1	HPS3	1	1
ROS1	CYLD	1	1
ROS1	KCTD3	1	1
ROS1	BCORL1	1	1
ROS1	SLK	1	1
RPTN	C14orf43	1	1
RPTN	MAP4K3	1	1
RPTN	PLXNA3	1	1
CTNNB1	PTEN	1	1
CTNNB1	RB1	1	1
CTNNB1	TOP2B	1	1
CTNNB1	PTCH1	1	1
CTNNB1	PLEKHF2	1	1
CTNNB1	ATM	1	1
CTNNB1	RLIM	1	1
CTNNB1	CYLD	1	1
CTNNB1	MAP4K3	1	1
CTNNB1	PTGDR	1	1
CTNNB1	GRB2	1	1
CTNNB1	SMAD4	1	1
PTEN	RB1	1	1
PTEN	C2orf29	1	1
PTEN	PTCH1	1	1
PTEN	ATM	1	1
PTEN	CYLD	1	1
PTEN	SMAD4	1	1
RBM44	UBQLN2	1	1
RBM44	GMPS	1	1
RBM44	KIAA1586	1	1
RBM44	L1TD1	1	1
RBM44	NLRC4	1	1
RBM44	SLC26A8	1	1
RBM44	CHD3	1	1
RBM44	ATM	1	1
RBM44	MAP4K3	1	1
RBM44	KCTD3	1	1
RBM44	BCORL1	1	1
RBM44	C15orf52	1	1
ECT2	DDX26B	1	1
ECT2	ATP6V1B1	1	1
ECT2	CHD3	1	1
ECT2	BCORL1	1	1
DDX26B	RB1	1	1
DDX26B	KIAA1586	1	1
DDX26B	ATM	1	1
DDX26B	BCORL1	1	1
DDX26B	PLXNA3	1	1
UBQLN2	CHD3	1	1
UBQLN2	BCORL1	1	1
ALDH1A3	KIAA1586	1	1
ALDH1A3	ATP6V1B1	1	1
RB1	TOP2B	1	1
RB1	NLRC4	1	1
RB1	PTCH1	1	1
RB1	ATM	1	1
RB1	CYLD	1	1
RB1	PRPS1	1	1
RB1	BCORL1	1	1
RB1	SMAD4	1	1
TOP2B	PTCH1	1	1
TOP2B	SLC26A8	1	1
TOP2B	ATM	1	1
TOP2B	FKBP9	1	1
TOP2B	KCTD3	1	1
TOP2B	SLK	1	1
GMPS	KIAA1586	1	1
GMPS	L1TD1	1	1
GMPS	NLRC4	1	1
GMPS	C14orf43	1	1
GMPS	NAA25	1	1
GMPS	SLC26A8	1	1
GMPS	FKBP9	1	1
GMPS	SLK	1	1
KIAA1586	SLC26A8	1	1
KIAA1586	ATM	1	1
L1TD1	C14orf43	1	1
L1TD1	ATP6V1B1	1	1
L1TD1	NAA25	1	1
L1TD1	SLC26A8	1	1
L1TD1	CHD3	1	1
L1TD1	CYSLTR2	1	1
L1TD1	MAP4K3	1	1
NLRC4	PTCH1	1	1
NLRC4	CHD3	1	1
NLRC4	ATM	1	1
NLRC4	BCORL1	1	1
DCLK2	ATM	1	1
C2orf29	CYLD	1	1
PTCH1	PIK3R1	1	1
PTCH1	PLEKHF2	1	1
PTCH1	ATM	1	1
PTCH1	CYLD	1	1
PTCH1	PRPS1	1	1
PTCH1	KCTD3	1	1
PTCH1	BCORL1	1	1
PTCH1	SMAD4	1	1
LINGO4	C14orf43	1	1
LINGO4	NAA25	1	1
LINGO4	12q-Amp	1	1
C14orf43	ATP6V1B1	1	1
C14orf43	CHD3	1	1
C14orf43	PLXNA3	1	1
PIK3R1	ATM	1	1
ATP6V1B1	PLXNA3	1	1
BCL9	NAA25	1	1
BCL9	CHD3	1	1
BCL9	FKBP9	1	1
BCL9	MAP4K3	1	1
BCL9	KCTD3	1	1
NAA25	CHD3	1	1
NAA25	FKBP9	1	1
SLC26A8	CHD3	1	1
SLC26A8	ATM	1	1
SLC26A8	MAP4K3	1	1
SLC26A8	KCTD3	1	1
SLC26A8	BCORL1	1	1
SLC26A8	SLK	1	1
CHD3	ATM	1	1
CHD3	FKBP9	1	1
CHD3	MAP4K3	1	1
CHD3	KCTD3	1	1
CHD3	BCORL1	1	1
PLEKHF2	SLK	1	1
PLEKHF2	SMAD4	1	1
ATM	FKBP9	1	1
ATM	HPS3	1	1
ATM	CYLD	1	1
ATM	PRPS1	1	1
ATM	KCTD3	1	1
ATM	BCORL1	1	1
ATM	SMAD4	1	1
FKBP9	HPS3	1	1
FKBP9	MAP4K3	1	1
FKBP9	BCORL1	1	1
CYLD	SLK	1	1
GGT1	13q-Amp	1	1
GGT1	20q-Amp	1	1
GGT1	8q-Amp	1	1
GGT1	18q-Del	1	1
GGT1	Amp_13q12.13	1	1
GGT1	Amp_13q22.1	1	1
GGT1	Amp_20q11.21	1	1
GGT1	Amp_20q12	1	1
GGT1	Amp_20q13.12	1	1
MAP4K3	BCORL1	1	1
PTGDR	BCORL1	1	1
PTGDR	GRB2	1	1
BCORL1	PLXNA3	1	1
BCORL1	SLK	1	1
12q-Amp	7q-Amp	1	1
12q-Amp	8p-Amp	1	1
12q-Amp	Amp_8p11.23	1	1
12q-Amp	Amp_8p11.21	1	1
12q-Amp	Amp_12p13.33	1	1
12q-Amp	Amp_19q13.11	1	1
13q-Amp	20p-Amp	1	1
13q-Amp	20q-Amp	1	1
13q-Amp	7p-Amp	1	1
13q-Amp	7q-Amp	1	1
13q-Amp	14q-Del	1	1
13q-Amp	17p-Del	1	1
13q-Amp	18p-Del	1	1
13q-Amp	18q-Del	1	1
13q-Amp	4p-Del	1	1
13q-Amp	4q-Del	1	1
13q-Amp	Amp_13q12.13	1	1
13q-Amp	Amp_13q22.1	1	1
13q-Amp	Amp_16p11.2	1	1
13q-Amp	Amp_16q12.1	1	1
13q-Amp	Amp_17q12	1	1
13q-Amp	Amp_20p11.23	1	1
13q-Amp	Amp_20p11.21	1	1
13q-Amp	Amp_20q11.21	1	1
13q-Amp	Amp_20q12	1	1
13q-Amp	Amp_20q13.12	1	1
13q-Amp	Del_4q35.1	1	1
13q-Amp	Del_8p23.2	1	1
13q-Amp	Del_8p22	1	1
13q-Amp	Del_14q31.1	1	1
13q-Amp	Del_17p12	1	1
13q-Amp	Del_18p11.31	1	1
13q-Amp	Del_18q12.2	1	1
13q-Amp	Del_18q21.2	1	1
13q-Amp	Del_18q22.1	1	1
16p-Amp	18p-Del	1	1
16p-Amp	18q-Del	1	1
16p-Amp	Amp_5p13.2	1	1
16p-Amp	Amp_13q22.1	1	1
16p-Amp	Amp_16p11.2	1	1
16p-Amp	Amp_16q12.1	1	1
16p-Amp	Amp_20p11.21	1	1
16p-Amp	Del_14q31.1	1	1
16p-Amp	Del_18p11.31	1	1
16p-Amp	Del_18q12.2	1	1
16p-Amp	Del_18q21.2	1	1
16p-Amp	Del_18q22.1	1	1
17q-Amp	20q-Amp	1	1
17q-Amp	Amp_13q22.1	1	1
17q-Amp	Amp_17p11.2	1	1
17q-Amp	Amp_17q12	1	1
17q-Amp	Amp_17q24.1	1	1
17q-Amp	Amp_20q11.21	1	1
17q-Amp	Amp_20q12	1	1
17q-Amp	Amp_20q13.12	1	1
17q-Amp	Del_17p12	1	1
20p-Amp	20q-Amp	1	1
20p-Amp	7p-Amp	1	1
20p-Amp	7q-Amp	1	1
20p-Amp	8q-Amp	1	1
20p-Amp	18p-Del	1	1
20p-Amp	18q-Del	1	1
20p-Amp	Amp_8p11.21	1	1
20p-Amp	Amp_8q24.21	1	1
20p-Amp	Amp_13q12.13	1	1
20p-Amp	Amp_13q22.1	1	1
20p-Amp	Amp_20p11.23	1	1
20p-Amp	Amp_20p11.21	1	1
20p-Amp	Amp_20q11.21	1	1
20p-Amp	Amp_20q12	1	1
20p-Amp	Amp_20q13.12	1	1
20p-Amp	Del_17p12	1	1
20p-Amp	Del_18p11.31	1	1
20p-Amp	Del_18q12.2	1	1
20p-Amp	Del_18q21.2	1	1
20p-Amp	Del_18q22.1	1	1
20q-Amp	7p-Amp	1	1
20q-Amp	7q-Amp	1	1
20q-Amp	8q-Amp	1	1
20q-Amp	14q-Del	1	1
20q-Amp	15q-Del	1	1
20q-Amp	17p-Del	1	1
20q-Amp	18p-Del	1	1
20q-Amp	18q-Del	1	1
20q-Amp	4p-Del	1	1
20q-Amp	4q-Del	1	1
20q-Amp	8p-Del	1	1
20q-Amp	Amp_8p11.23	1	1
20q-Amp	Amp_8p11.21	1	1
20q-Amp	Amp_8q24.21	1	1
20q-Amp	Amp_11p15.5	1	1
20q-Amp	Amp_13q12.13	1	1
20q-Amp	Amp_13q22.1	1	1
20q-Amp	Amp_16q12.1	1	1
20q-Amp	Amp_17p11.2	1	1
20q-Amp	Amp_17q12	1	1
20q-Amp	Amp_20p11.23	1	1
20q-Amp	Amp_20p11.21	1	1
20q-Amp	Amp_20q11.21	1	1
20q-Amp	Amp_20q12	1	1
20q-Amp	Amp_20q13.12	1	1
20q-Amp	Del_1p36.11	1	1
20q-Amp	Del_4q35.1	1	1
20q-Amp	Del_8p23.2	1	1
20q-Amp	Del_8p22	1	1
20q-Amp	Del_14q31.1	1	1
20q-Amp	Del_15q11.2	1	1
20q-Amp	Del_15q22.33	1	1
20q-Amp	Del_17p12	1	1
20q-Amp	Del_18p11.31	1	1
20q-Amp	Del_18q12.2	1	1
20q-Amp	Del_18q21.2	1	1
20q-Amp	Del_18q22.1	1	1
7p-Amp	7q-Amp	1	1
7p-Amp	8p-Amp	1	1
7p-Amp	8q-Amp	1	1
7p-Amp	17p-Del	1	1
7p-Amp	18p-Del	1	1
7p-Amp	18q-Del	1	1
7p-Amp	Amp_8p11.23	1	1
7p-Amp	Amp_8p11.21	1	1
7p-Amp	Amp_8q24.21	1	1
7p-Amp	Amp_12p13.33	1	1
7p-Amp	Amp_13q12.13	1	1
7p-Amp	Amp_13q22.1	1	1
7p-Amp	Amp_20p11.23	1	1
7p-Amp	Amp_20p11.21	1	1
7p-Amp	Amp_20q11.21	1	1
7p-Amp	Amp_20q12	1	1
7p-Amp	Amp_20q13.12	1	1
7p-Amp	Del_8p23.2	1	1
7p-Amp	Del_8p22	1	1
7p-Amp	Del_18p11.31	1	1
7p-Amp	Del_18q12.2	1	1
7p-Amp	Del_18q21.2	1	1
7p-Amp	Del_18q22.1	1	1
7q-Amp	8p-Amp	1	1
7q-Amp	8q-Amp	1	1
7q-Amp	Amp_8p11.23	1	1
7q-Amp	Amp_8p11.21	1	1
7q-Amp	Amp_8q24.21	1	1
7q-Amp	Amp_12p13.33	1	1
7q-Amp	Amp_13q12.13	1	1
7q-Amp	Amp_13q22.1	1	1
7q-Amp	Amp_17q12	1	1
7q-Amp	Amp_20p11.23	1	1
7q-Amp	Amp_20p11.21	1	1
7q-Amp	Amp_20q11.21	1	1
7q-Amp	Amp_20q12	1	1
7q-Amp	Amp_20q13.12	1	1
7q-Amp	Del_8p22	1	1
7q-Amp	Del_18q12.2	1	1
7q-Amp	Del_18q22.1	1	1
8p-Amp	8q-Amp	1	1
8p-Amp	Amp_8p11.23	1	1
8p-Amp	Amp_8p11.21	1	1
8p-Amp	Amp_8q24.21	1	1
8p-Amp	Amp_12p13.33	1	1
8p-Amp	Amp_19q13.11	1	1
8q-Amp	Amp_8p11.23	1	1
8q-Amp	Amp_8p11.21	1	1
8q-Amp	Amp_8q24.21	1	1
8q-Amp	Amp_20p11.23	1	1
8q-Amp	Amp_20p11.21	1	1
8q-Amp	Amp_20q11.21	1	1
8q-Amp	Amp_20q12	1	1
8q-Amp	Amp_20q13.12	1	1
8q-Amp	Del_8p23.2	1	1
8q-Amp	Del_8p22	1	1
14q-Del	15q-Del	1	1
14q-Del	17p-Del	1	1
14q-Del	18p-Del	1	1
14q-Del	18q-Del	1	1
14q-Del	1p-Del	1	1
14q-Del	22q-Del	1	1
14q-Del	4p-Del	1	1
14q-Del	Amp_13q12.13	1	1
14q-Del	Amp_13q22.1	1	1
14q-Del	Amp_20q11.21	1	1
14q-Del	Amp_20q12	1	1
14q-Del	Amp_20q13.12	1	1
14q-Del	Del_1p36.11	1	1
14q-Del	Del_3p26.1	1	1
14q-Del	Del_4q35.1	1	1
14q-Del	Del_8p23.2	1	1
14q-Del	Del_8p22	1	1
14q-Del	Del_14q31.1	1	1
14q-Del	Del_15q11.2	1	1
14q-Del	Del_15q15.2	1	1
14q-Del	Del_15q21.1	1	1
14q-Del	Del_15q22.33	1	1
14q-Del	Del_17p12	1	1
14q-Del	Del_18p11.31	1	1
14q-Del	Del_18q12.2	1	1
14q-Del	Del_18q21.2	1	1
14q-Del	Del_18q22.1	1	1
14q-Del	Del_22q13.32	1	1
15q-Del	17p-Del	1	1
15q-Del	18p-Del	1	1
15q-Del	18q-Del	1	1
15q-Del	22q-Del	1	1
15q-Del	8p-Del	1	1
15q-Del	Amp_13q12.13	1	1
15q-Del	Amp_20q11.21	1	1
15q-Del	Amp_20q12	1	1
15q-Del	Amp_20q13.12	1	1
15q-Del	Del_8p23.2	1	1
15q-Del	Del_8p22	1	1
15q-Del	Del_14q31.1	1	1
15q-Del	Del_15q11.2	1	1
15q-Del	Del_15q15.2	1	1
15q-Del	Del_15q21.1	1	1
15q-Del	Del_15q22.33	1	1
15q-Del	Del_17p12	1	1
15q-Del	Del_18p11.31	1	1
15q-Del	Del_18q12.2	1	1
15q-Del	Del_18q21.2	1	1
15q-Del	Del_18q22.1	1	1
15q-Del	Del_22q13.32	1	1
17p-Del	18p-Del	1	1
17p-Del	18q-Del	1	1
17p-Del	22q-Del	1	1
17p-Del	4p-Del	1	1
17p-Del	4q-Del	1	1
17p-Del	Amp_13q12.13	1	1
17p-Del	Amp_13q22.1	1	1
17p-Del	Amp_20q11.21	1	1
17p-Del	Amp_20q12	1	1
17p-Del	Amp_20q13.12	1	1
17p-Del	Del_1p36.11	1	1
17p-Del	Del_4q22.1	1	1
17p-Del	Del_4q35.1	1	1
17p-Del	Del_8p23.2	1	1
17p-Del	Del_8p22	1	1
17p-Del	Del_10q25.2	1	1
17p-Del	Del_14q31.1	1	1
17p-Del	Del_15q11.2	1	1
17p-Del	Del_15q15.2	1	1
17p-Del	Del_15q21.1	1	1
17p-Del	Del_15q22.33	1	1
17p-Del	Del_17p12	1	1
17p-Del	Del_17q24.3	1	1
17p-Del	Del_18p11.31	1	1
17p-Del	Del_18q12.2	1	1
17p-Del	Del_18q21.2	1	1
17p-Del	Del_18q22.1	1	1
17p-Del	Del_19p13.3	1	1
17p-Del	Del_21q11.2	1	1
17p-Del	Del_22q13.32	1	1
18p-Del	18q-Del	1	1
18p-Del	1p-Del	1	1
18p-Del	21q-Del	1	1
18p-Del	22q-Del	1	1
18p-Del	4p-Del	1	1
18p-Del	4q-Del	1	1
18p-Del	5q-Del	1	1
18p-Del	8p-Del	1	1
18p-Del	Amp_13q12.13	1	1
18p-Del	Amp_13q22.1	1	1
18p-Del	Amp_20p11.23	1	1
18p-Del	Amp_20p11.21	1	1
18p-Del	Amp_20q11.21	1	1
18p-Del	Amp_20q12	1	1
18p-Del	Amp_20q13.12	1	1
18p-Del	Del_1p36.11	1	1
18p-Del	Del_1p13.1	1	1
18p-Del	Del_3p26.1	1	1
18p-Del	Del_4q22.1	1	1
18p-Del	Del_4q35.1	1	1
18p-Del	Del_5q12.1	1	1
18p-Del	Del_5q21.1	1	1
18p-Del	Del_5q22.2	1	1
18p-Del	Del_8p23.2	1	1
18p-Del	Del_8p22	1	1
18p-Del	Del_14q31.1	1	1
18p-Del	Del_15q11.2	1	1
18p-Del	Del_15q15.2	1	1
18p-Del	Del_15q21.1	1	1
18p-Del	Del_15q22.33	1	1
18p-Del	Del_17p12	1	1
18p-Del	Del_17q24.3	1	1
18p-Del	Del_18p11.31	1	1
18p-Del	Del_18q12.2	1	1
18p-Del	Del_18q21.2	1	1
18p-Del	Del_18q22.1	1	1
18p-Del	Del_21q11.2	1	1
18p-Del	Del_22q13.32	1	1
18q-Del	1p-Del	1	1
18q-Del	21q-Del	1	1
18q-Del	22q-Del	1	1
18q-Del	4p-Del	1	1
18q-Del	4q-Del	1	1
18q-Del	5q-Del	1	1
18q-Del	8p-Del	1	1
18q-Del	Amp_13q12.13	1	1
18q-Del	Amp_13q22.1	1	1
18q-Del	Amp_16q12.1	1	1
18q-Del	Amp_20p11.23	1	1
18q-Del	Amp_20p11.21	1	1
18q-Del	Amp_20q11.21	1	1
18q-Del	Amp_20q12	1	1
18q-Del	Amp_20q13.12	1	1
18q-Del	Del_1p36.11	1	1
18q-Del	Del_1p13.1	1	1
18q-Del	Del_3p26.1	1	1
18q-Del	Del_4q22.1	1	1
18q-Del	Del_4q35.1	1	1
18q-Del	Del_5q21.1	1	1
18q-Del	Del_5q22.2	1	1
18q-Del	Del_8p23.2	1	1
18q-Del	Del_8p22	1	1
18q-Del	Del_14q31.1	1	1
18q-Del	Del_15q11.2	1	1
18q-Del	Del_15q15.2	1	1
18q-Del	Del_15q21.1	1	1
18q-Del	Del_15q22.33	1	1
18q-Del	Del_17p12	1	1
18q-Del	Del_17q24.3	1	1
18q-Del	Del_18p11.31	1	1
18q-Del	Del_18q12.2	1	1
18q-Del	Del_18q21.2	1	1
18q-Del	Del_18q22.1	1	1
18q-Del	Del_19p13.3	1	1
18q-Del	Del_21q11.2	1	1
18q-Del	Del_22q13.32	1	1
1p-Del	21q-Del	1	1
1p-Del	22q-Del	1	1
1p-Del	4p-Del	1	1
1p-Del	4q-Del	1	1
1p-Del	Del_1p36.11	1	1
1p-Del	Del_1p33	1	1
1p-Del	Del_1p13.1	1	1
1p-Del	Del_3p26.1	1	1
1p-Del	Del_4q35.1	1	1
1p-Del	Del_9p21.3	1	1
1p-Del	Del_14q31.1	1	1
1p-Del	Del_18q12.2	1	1
1p-Del	Del_18q21.2	1	1
1p-Del	Del_18q22.1	1	1
1p-Del	Del_21q11.2	1	1
1p-Del	Del_22q13.32	1	1
21q-Del	Del_1p36.11	1	1
21q-Del	Del_1p33	1	1
21q-Del	Del_1p13.1	1	1
21q-Del	Del_4q35.1	1	1
21q-Del	Del_18p11.31	1	1
21q-Del	Del_18q12.2	1	1
21q-Del	Del_18q21.2	1	1
21q-Del	Del_18q22.1	1	1
21q-Del	Del_21q11.2	1	1
22q-Del	4p-Del	1	1
22q-Del	4q-Del	1	1
22q-Del	8p-Del	1	1
22q-Del	Amp_13q12.13	1	1
22q-Del	Amp_13q22.1	1	1
22q-Del	Del_1p36.11	1	1
22q-Del	Del_1p33	1	1
22q-Del	Del_1p13.1	1	1
22q-Del	Del_4q22.1	1	1
22q-Del	Del_4q35.1	1	1
22q-Del	Del_8p23.2	1	1
22q-Del	Del_8p22	1	1
22q-Del	Del_10q21.1	1	1
22q-Del	Del_10q23.31	1	1
22q-Del	Del_10q25.2	1	1
22q-Del	Del_14q31.1	1	1
22q-Del	Del_15q11.2	1	1
22q-Del	Del_15q15.2	1	1
22q-Del	Del_15q21.1	1	1
22q-Del	Del_15q22.33	1	1
22q-Del	Del_17p12	1	1
22q-Del	Del_17q24.3	1	1
22q-Del	Del_18p11.31	1	1
22q-Del	Del_18q12.2	1	1
22q-Del	Del_18q21.2	1	1
22q-Del	Del_18q22.1	1	1
22q-Del	Del_22q13.32	1	1
4p-Del	4q-Del	1	1
4p-Del	5q-Del	1	1
4p-Del	8p-Del	1	1
4p-Del	Amp_13q12.13	1	1
4p-Del	Amp_20q12	1	1
4p-Del	Amp_20q13.12	1	1
4p-Del	Del_1p33	1	1
4p-Del	Del_1p13.1	1	1
4p-Del	Del_3p26.1	1	1
4p-Del	Del_4q22.1	1	1
4p-Del	Del_4q35.1	1	1
4p-Del	Del_5q12.1	1	1
4p-Del	Del_5q21.1	1	1
4p-Del	Del_8p23.2	1	1
4p-Del	Del_8p22	1	1
4p-Del	Del_8q11.1	1	1
4p-Del	Del_14q31.1	1	1
4p-Del	Del_15q11.2	1	1
4p-Del	Del_15q22.33	1	1
4p-Del	Del_17p12	1	1
4p-Del	Del_17q24.3	1	1
4p-Del	Del_18p11.31	1	1
4p-Del	Del_18q12.2	1	1
4p-Del	Del_18q21.2	1	1
4p-Del	Del_18q22.1	1	1
4p-Del	Del_21q11.2	1	1
4p-Del	Del_22q13.32	1	1
4q-Del	5q-Del	1	1
4q-Del	Amp_13q12.13	1	1
4q-Del	Amp_13q22.1	1	1
4q-Del	Amp_20q12	1	1
4q-Del	Del_1p36.11	1	1
4q-Del	Del_1p33	1	1
4q-Del	Del_1p13.1	1	1
4q-Del	Del_3p26.1	1	1
4q-Del	Del_4q22.1	1	1
4q-Del	Del_4q35.1	1	1
4q-Del	Del_5q12.1	1	1
4q-Del	Del_5q21.1	1	1
4q-Del	Del_8p23.2	1	1
4q-Del	Del_8p22	1	1
4q-Del	Del_10q21.1	1	1
4q-Del	Del_14q31.1	1	1
4q-Del	Del_15q11.2	1	1
4q-Del	Del_16p13.3	1	1
4q-Del	Del_17p12	1	1
4q-Del	Del_17q24.3	1	1
4q-Del	Del_18p11.31	1	1
4q-Del	Del_18q12.2	1	1
4q-Del	Del_18q21.2	1	1
4q-Del	Del_18q22.1	1	1
4q-Del	Del_19p13.3	1	1
4q-Del	Del_21q11.2	1	1
4q-Del	Del_22q13.32	1	1
5q-Del	Amp_5p13.2	1	1
5q-Del	Del_5q12.1	1	1
5q-Del	Del_5q21.1	1	1
5q-Del	Del_5q22.2	1	1
5q-Del	Del_18q12.2	1	1
5q-Del	Del_18q21.2	1	1
8p-Del	Amp_20p11.21	1	1
8p-Del	Amp_20q11.21	1	1
8p-Del	Amp_20q12	1	1
8p-Del	Amp_20q13.12	1	1
8p-Del	Del_4q22.1	1	1
8p-Del	Del_4q35.1	1	1
8p-Del	Del_8p23.2	1	1
8p-Del	Del_8p22	1	1
8p-Del	Del_10q23.31	1	1
8p-Del	Del_14q31.1	1	1
8p-Del	Del_15q11.2	1	1
8p-Del	Del_15q15.2	1	1
8p-Del	Del_15q21.1	1	1
8p-Del	Del_15q22.33	1	1
8p-Del	Del_17p12	1	1
8p-Del	Del_18q12.2	1	1
8p-Del	Del_18q21.2	1	1
8p-Del	Del_18q22.1	1	1
8p-Del	Del_22q13.32	1	1
Amp_5p13.2	Del_5q12.1	1	1
Amp_6p21.1	Del_3q26.31	1	1
Amp_8p11.23	Amp_8p11.21	1	1
Amp_8p11.23	Amp_8q24.21	1	1
Amp_8p11.23	Amp_19q13.11	1	1
Amp_8p11.23	Amp_20p11.23	1	1
Amp_8p11.23	Amp_20p11.21	1	1
Amp_8p11.23	Amp_20q11.21	1	1
Amp_8p11.23	Amp_20q12	1	1
Amp_8p11.23	Amp_20q13.12	1	1
Amp_8p11.23	Del_8p22	1	1
Amp_8p11.21	Amp_8q24.21	1	1
Amp_8p11.21	Amp_12p13.33	1	1
Amp_8p11.21	Amp_19q13.11	1	1
Amp_8p11.21	Amp_20p11.23	1	1
Amp_8p11.21	Amp_20p11.21	1	1
Amp_8p11.21	Amp_20q11.21	1	1
Amp_8p11.21	Amp_20q12	1	1
Amp_8p11.21	Amp_20q13.12	1	1
Amp_8p11.21	Del_8p23.2	1	1
Amp_8p11.21	Del_8p22	1	1
Amp_8q24.21	Amp_17q12	1	1
Amp_8q24.21	Amp_17q24.1	1	1
Amp_8q24.21	Amp_20p11.23	1	1
Amp_8q24.21	Amp_20p11.21	1	1
Amp_8q24.21	Amp_20q11.21	1	1
Amp_8q24.21	Amp_20q12	1	1
Amp_8q24.21	Amp_20q13.12	1	1
Amp_8q24.21	Del_8p23.2	1	1
Amp_8q24.21	Del_8p22	1	1
Amp_8q24.21	Del_18q12.2	1	1
Amp_8q24.21	Del_18q22.1	1	1
Amp_11p15.5	Amp_20q11.21	1	1
Amp_12p13.33	Amp_19q13.11	1	1
Amp_12p13.33	Del_12p13.2	1	1
Amp_13q12.13	Amp_13q22.1	1	1
Amp_13q12.13	Amp_16q12.1	1	1
Amp_13q12.13	Amp_20p11.23	1	1
Amp_13q12.13	Amp_20p11.21	1	1
Amp_13q12.13	Amp_20q11.21	1	1
Amp_13q12.13	Amp_20q12	1	1
Amp_13q12.13	Amp_20q13.12	1	1
Amp_13q12.13	Del_1p13.1	1	1
Amp_13q12.13	Del_4q22.1	1	1
Amp_13q12.13	Del_4q35.1	1	1
Amp_13q12.13	Del_8p23.2	1	1
Amp_13q12.13	Del_8p22	1	1
Amp_13q12.13	Del_14q31.1	1	1
Amp_13q12.13	Del_15q11.2	1	1
Amp_13q12.13	Del_17p12	1	1
Amp_13q12.13	Del_18p11.31	1	1
Amp_13q12.13	Del_18q12.2	1	1
Amp_13q12.13	Del_18q21.2	1	1
Amp_13q12.13	Del_18q22.1	1	1
Amp_13q22.1	Amp_16p11.2	1	1
Amp_13q22.1	Amp_16q12.1	1	1
Amp_13q22.1	Amp_17p11.2	1	1
Amp_13q22.1	Amp_17q12	1	1
Amp_13q22.1	Amp_20p11.23	1	1
Amp_13q22.1	Amp_20p11.21	1	1
Amp_13q22.1	Amp_20q11.21	1	1
Amp_13q22.1	Amp_20q12	1	1
Amp_13q22.1	Amp_20q13.12	1	1
Amp_13q22.1	Del_4q35.1	1	1
Amp_13q22.1	Del_8p23.2	1	1
Amp_13q22.1	Del_8p22	1	1
Amp_13q22.1	Del_14q31.1	1	1
Amp_13q22.1	Del_17p12	1	1
Amp_13q22.1	Del_18p11.31	1	1
Amp_13q22.1	Del_18q12.2	1	1
Amp_13q22.1	Del_18q21.2	1	1
Amp_13q22.1	Del_18q22.1	1	1
Amp_16p11.2	Amp_16q12.1	1	1
Amp_16q12.1	Amp_20q12	1	1
Amp_16q12.1	Amp_20q13.12	1	1
Amp_16q12.1	Del_18q22.1	1	1
Amp_17p11.2	Amp_17q12	1	1
Amp_17p11.2	Amp_17q24.1	1	1
Amp_17p11.2	Amp_20q12	1	1
Amp_17p11.2	Amp_20q13.12	1	1
Amp_17q12	Amp_17q24.1	1	1
Amp_17q12	Amp_20q11.21	1	1
Amp_17q12	Amp_20q12	1	1
Amp_17q12	Amp_20q13.12	1	1
Amp_17q12	Del_17p12	1	1
Amp_17q24.1	Amp_20p11.23	1	1
Amp_17q24.1	Amp_20q11.21	1	1
Amp_17q24.1	Del_17p12	1	1
Amp_20p11.23	Amp_20p11.21	1	1
Amp_20p11.23	Amp_20q11.21	1	1
Amp_20p11.23	Amp_20q12	1	1
Amp_20p11.23	Amp_20q13.12	1	1
Amp_20p11.23	Del_8p23.2	1	1
Amp_20p11.23	Del_8p22	1	1
Amp_20p11.23	Del_18p11.31	1	1
Amp_20p11.23	Del_18q12.2	1	1
Amp_20p11.23	Del_18q21.2	1	1
Amp_20p11.23	Del_18q22.1	1	1
Amp_20p11.21	Amp_20q11.21	1	1
Amp_20p11.21	Amp_20q12	1	1
Amp_20p11.21	Amp_20q13.12	1	1
Amp_20p11.21	Del_8p23.2	1	1
Amp_20p11.21	Del_8p22	1	1
Amp_20p11.21	Del_14q31.1	1	1
Amp_20p11.21	Del_17p12	1	1
Amp_20p11.21	Del_18p11.31	1	1
Amp_20p11.21	Del_18q12.2	1	1
Amp_20p11.21	Del_18q21.2	1	1
Amp_20p11.21	Del_18q22.1	1	1
Amp_20q11.21	Amp_20q12	1	1
Amp_20q11.21	Amp_20q13.12	1	1
Amp_20q11.21	Del_1p36.11	1	1
Amp_20q11.21	Del_4q35.1	1	1
Amp_20q11.21	Del_8p23.2	1	1
Amp_20q11.21	Del_8p22	1	1
Amp_20q11.21	Del_14q31.1	1	1
Amp_20q11.21	Del_15q11.2	1	1
Amp_20q11.21	Del_15q15.2	1	1
Amp_20q11.21	Del_15q21.1	1	1
Amp_20q11.21	Del_15q22.33	1	1
Amp_20q11.21	Del_17p12	1	1
Amp_20q11.21	Del_18p11.31	1	1
Amp_20q11.21	Del_18q12.2	1	1
Amp_20q11.21	Del_18q21.2	1	1
Amp_20q11.21	Del_18q22.1	1	1
Amp_20q12	Amp_20q13.12	1	1
Amp_20q12	Del_1p36.11	1	1
Amp_20q12	Del_4q35.1	1	1
Amp_20q12	Del_8p23.2	1	1
Amp_20q12	Del_8p22	1	1
Amp_20q12	Del_14q31.1	1	1
Amp_20q12	Del_15q11.2	1	1
Amp_20q12	Del_15q15.2	1	1
Amp_20q12	Del_15q21.1	1	1
Amp_20q12	Del_15q22.33	1	1
Amp_20q12	Del_17p12	1	1
Amp_20q12	Del_18p11.31	1	1
Amp_20q12	Del_18q12.2	1	1
Amp_20q12	Del_18q21.2	1	1
Amp_20q12	Del_18q22.1	1	1
Amp_20q12	Del_21q11.2	1	1
Amp_20q13.12	Del_1p36.11	1	1
Amp_20q13.12	Del_4q35.1	1	1
Amp_20q13.12	Del_8p23.2	1	1
Amp_20q13.12	Del_8p22	1	1
Amp_20q13.12	Del_14q31.1	1	1
Amp_20q13.12	Del_15q11.2	1	1
Amp_20q13.12	Del_15q15.2	1	1
Amp_20q13.12	Del_15q22.33	1	1
Amp_20q13.12	Del_17p12	1	1
Amp_20q13.12	Del_18p11.31	1	1
Amp_20q13.12	Del_18q12.2	1	1
Amp_20q13.12	Del_18q21.2	1	1
Amp_20q13.12	Del_18q22.1	1	1
Amp_20q13.12	Del_21q11.2	1	1
Del_1p36.11	Del_1p33	1	1
Del_1p36.11	Del_1p13.1	1	1
Del_1p36.11	Del_8p22	1	1
Del_1p36.11	Del_8q11.1	1	1
Del_1p36.11	Del_14q31.1	1	1
Del_1p36.11	Del_17p12	1	1
Del_1p36.11	Del_18p11.31	1	1
Del_1p36.11	Del_18q12.2	1	1
Del_1p36.11	Del_18q21.2	1	1
Del_1p36.11	Del_18q22.1	1	1
Del_1p36.11	Del_21q11.2	1	1
Del_1p36.11	Del_22q13.32	1	1
Del_1p33	Del_1p13.1	1	1
Del_1p33	Del_4q35.1	1	1
Del_1p33	Del_10q21.1	1	1
Del_1p33	Del_14q31.1	1	1
Del_1p33	Del_18q12.2	1	1
Del_1p33	Del_18q21.2	1	1
Del_1p33	Del_18q22.1	1	1
Del_1p33	Del_21q11.2	1	1
Del_1p33	Del_22q13.32	1	1
Del_1p13.1	Del_4q22.1	1	1
Del_1p13.1	Del_4q35.1	1	1
Del_1p13.1	Del_6q26	1	1
Del_1p13.1	Del_14q31.1	1	1
Del_1p13.1	Del_15q22.33	1	1
Del_1p13.1	Del_17p12	1	1
Del_1p13.1	Del_18p11.31	1	1
Del_1p13.1	Del_18q12.2	1	1
Del_1p13.1	Del_18q21.2	1	1
Del_1p13.1	Del_18q22.1	1	1
Del_1p13.1	Del_21q11.2	1	1
Del_1p13.1	Del_22q13.32	1	1
Del_3p26.1	Del_3p14.2	1	1
Del_3p26.1	Del_3q26.31	1	1
Del_3p26.1	Del_4q35.1	1	1
Del_3p26.1	Del_14q31.1	1	1
Del_3p26.1	Del_15q22.33	1	1
Del_3p26.1	Del_17p12	1	1
Del_3p26.1	Del_18p11.31	1	1
Del_3p26.1	Del_18q12.2	1	1
Del_3p26.1	Del_18q21.2	1	1
Del_3p26.1	Del_18q22.1	1	1
Del_3p26.1	Del_21q11.2	1	1
Del_3p26.1	Del_22q13.32	1	1
Del_3p14.2	Del_3q26.31	1	1
Del_3p14.2	Del_4q35.1	1	1
Del_3p14.2	Del_7q31.1	1	1
Del_4q22.1	Del_4q35.1	1	1
Del_4q22.1	Del_5q12.1	1	1
Del_4q22.1	Del_5q21.1	1	1
Del_4q22.1	Del_8p23.2	1	1
Del_4q22.1	Del_8p22	1	1
Del_4q22.1	Del_15q11.2	1	1
Del_4q22.1	Del_16p13.3	1	1
Del_4q22.1	Del_17p12	1	1
Del_4q22.1	Del_18q12.2	1	1
Del_4q22.1	Del_18q21.2	1	1
Del_4q22.1	Del_18q22.1	1	1
Del_4q22.1	Del_22q13.32	1	1
Del_4q35.1	Del_5q12.1	1	1
Del_4q35.1	Del_7q31.1	1	1
Del_4q35.1	Del_8p23.2	1	1
Del_4q35.1	Del_8p22	1	1
Del_4q35.1	Del_8q11.1	1	1
Del_4q35.1	Del_10q21.1	1	1
Del_4q35.1	Del_10q23.31	1	1
Del_4q35.1	Del_14q31.1	1	1
Del_4q35.1	Del_17p12	1	1
Del_4q35.1	Del_18p11.31	1	1
Del_4q35.1	Del_18q12.2	1	1
Del_4q35.1	Del_18q21.2	1	1
Del_4q35.1	Del_18q22.1	1	1
Del_4q35.1	Del_19p13.3	1	1
Del_4q35.1	Del_21q11.2	1	1
Del_4q35.1	Del_22q13.32	1	1
Del_5q12.1	Del_5q21.1	1	1
Del_5q12.1	Del_5q22.2	1	1
Del_5q12.1	Del_8p23.2	1	1
Del_5q21.1	Del_5q22.2	1	1
Del_5q21.1	Del_17p12	1	1
Del_5q21.1	Del_18q12.2	1	1
Del_5q21.1	Del_18q21.2	1	1
Del_5q21.1	Del_18q22.1	1	1
Del_5q22.2	Del_17p12	1	1
Del_5q22.2	Del_18p11.31	1	1
Del_5q22.2	Del_18q12.2	1	1
Del_5q22.2	Del_18q21.2	1	1
Del_5q22.2	Del_18q22.1	1	1
Del_6p25.3	Del_9p21.3	1	1
Del_6q26	Del_8q11.1	1	1
Del_6q26	Del_10q23.31	1	1
Del_6q26	Del_10q25.2	1	1
Del_6q26	Del_18q21.2	1	1
Del_6q26	Del_18q22.1	1	1
Del_6q26	Del_21q11.2	1	1
Del_8p23.2	Del_8p22	1	1
Del_8p23.2	Del_8q11.1	1	1
Del_8p23.2	Del_10q23.31	1	1
Del_8p23.2	Del_14q31.1	1	1
Del_8p23.2	Del_15q11.2	1	1
Del_8p23.2	Del_15q15.2	1	1
Del_8p23.2	Del_15q21.1	1	1
Del_8p23.2	Del_15q22.33	1	1
Del_8p23.2	Del_17p12	1	1
Del_8p23.2	Del_18p11.31	1	1
Del_8p23.2	Del_18q12.2	1	1
Del_8p23.2	Del_18q21.2	1	1
Del_8p23.2	Del_18q22.1	1	1
Del_8p23.2	Del_19p13.3	1	1
Del_8p23.2	Del_22q13.32	1	1
Del_8p22	Del_8q11.1	1	1
Del_8p22	Del_10q23.31	1	1
Del_8p22	Del_14q31.1	1	1
Del_8p22	Del_15q11.2	1	1
Del_8p22	Del_15q15.2	1	1
Del_8p22	Del_15q21.1	1	1
Del_8p22	Del_15q22.33	1	1
Del_8p22	Del_17p12	1	1
Del_8p22	Del_18p11.31	1	1
Del_8p22	Del_18q12.2	1	1
Del_8p22	Del_18q21.2	1	1
Del_8p22	Del_18q22.1	1	1
Del_8p22	Del_22q13.32	1	1
Del_8q11.1	Del_18q12.2	1	1
Del_8q11.1	Del_18q21.2	1	1
Del_8q11.1	Del_18q22.1	1	1
Del_8q11.1	Del_21q11.2	1	1
Del_10q21.1	Del_10q23.31	1	1
Del_10q21.1	Del_10q25.2	1	1
Del_10q21.1	Del_17p12	1	1
Del_10q21.1	Del_18q22.1	1	1
Del_10q21.1	Del_22q13.32	1	1
Del_10q23.31	Del_10q25.2	1	1
Del_10q23.31	Del_18q21.2	1	1
Del_10q23.31	Del_18q22.1	1	1
Del_10q23.31	Del_22q13.32	1	1
Del_10q25.2	Del_22q13.32	1	1
Del_12p13.2	Del_17p12	1	1
Del_12p13.2	Del_18q21.2	1	1
Del_12p13.2	Del_18q22.1	1	1
Del_14q31.1	Del_15q11.2	1	1
Del_14q31.1	Del_15q15.2	1	1
Del_14q31.1	Del_15q21.1	1	1
Del_14q31.1	Del_15q22.33	1	1
Del_14q31.1	Del_17p12	1	1
Del_14q31.1	Del_18p11.31	1	1
Del_14q31.1	Del_18q12.2	1	1
Del_14q31.1	Del_18q21.2	1	1
Del_14q31.1	Del_18q22.1	1	1
Del_14q31.1	Del_22q13.32	1	1
Del_15q11.2	Del_15q15.2	1	1
Del_15q11.2	Del_15q21.1	1	1
Del_15q11.2	Del_15q22.33	1	1
Del_15q11.2	Del_17p12	1	1
Del_15q11.2	Del_18p11.31	1	1
Del_15q11.2	Del_18q12.2	1	1
Del_15q11.2	Del_18q21.2	1	1
Del_15q11.2	Del_18q22.1	1	1
Del_15q11.2	Del_22q13.32	1	1
Del_15q15.2	Del_15q21.1	1	1
Del_15q15.2	Del_15q22.33	1	1
Del_15q15.2	Del_17p12	1	1
Del_15q15.2	Del_18p11.31	1	1
Del_15q15.2	Del_18q12.2	1	1
Del_15q15.2	Del_18q21.2	1	1
Del_15q15.2	Del_18q22.1	1	1
Del_15q15.2	Del_22q13.32	1	1
Del_15q21.1	Del_15q22.33	1	1
Del_15q21.1	Del_17p12	1	1
Del_15q21.1	Del_18p11.31	1	1
Del_15q21.1	Del_18q12.2	1	1
Del_15q21.1	Del_18q21.2	1	1
Del_15q21.1	Del_18q22.1	1	1
Del_15q21.1	Del_22q13.32	1	1
Del_15q22.33	Del_17p12	1	1
Del_15q22.33	Del_18p11.31	1	1
Del_15q22.33	Del_18q12.2	1	1
Del_15q22.33	Del_18q21.2	1	1
Del_15q22.33	Del_18q22.1	1	1
Del_15q22.33	Del_22q13.32	1	1
Del_17p12	Del_17q24.3	1	1
Del_17p12	Del_18p11.31	1	1
Del_17p12	Del_18q12.2	1	1
Del_17p12	Del_18q21.2	1	1
Del_17p12	Del_18q22.1	1	1
Del_17p12	Del_19p13.3	1	1
Del_17p12	Del_21q11.2	1	1
Del_17p12	Del_22q13.32	1	1
Del_17q24.3	Del_18q12.2	1	1
Del_17q24.3	Del_18q21.2	1	1
Del_17q24.3	Del_18q22.1	1	1
Del_17q24.3	Del_19p13.3	1	1
Del_18p11.31	Del_18q12.2	1	1
Del_18p11.31	Del_18q21.2	1	1
Del_18p11.31	Del_18q22.1	1	1
Del_18p11.31	Del_21q11.2	1	1
Del_18p11.31	Del_22q13.32	1	1
Del_18q12.2	Del_18q21.2	1	1
Del_18q12.2	Del_18q22.1	1	1
Del_18q12.2	Del_19p13.3	1	1
Del_18q12.2	Del_21q11.2	1	1
Del_18q12.2	Del_22q13.32	1	1
Del_18q21.2	Del_18q22.1	1	1
Del_18q21.2	Del_19p13.3	1	1
Del_18q21.2	Del_21q11.2	1	1
Del_18q21.2	Del_22q13.32	1	1
Del_18q22.1	Del_19p13.3	1	1
Del_18q22.1	Del_21q11.2	1	1
Del_18q22.1	Del_22q13.32	1	1
Del_19p13.3	Del_22q13.32	1	1
MGA	Amp_20p11.23	1.08e-05	1
RNF43	Amp_20p11.21	1.17e-05	1
BMPR2	Amp_13q22.1	1.2e-05	1
RNF43	Del_17p12	1.31e-08	1
CHD3	Amp_20q13.12	1.36e-08	1
FKBP9	Amp_20q12	1.41e-05	1
KCTD3	Amp_20q12	1.41e-05	1
MGA	20q-Amp	1.44e-05	1
MGA	Amp_20q13.12	1.49e-05	1
MGA	Amp_20p11.21	1.61e-05	1
ZBTB20	Amp_20q13.12	1.72e-05	1
BMPR2	18p-Del	1.82e-05	1
RNF43	18q-Del	1.86e-08	1
RNF43	Amp_20q12	1.8e-10	1
KCTD3	20q-Amp	1.91e-05	1
B2M	Amp_20q11.21	1e-04	1
DDX26B	Amp_20q11.21	1e-04	1
CHD3	Del_17p12	2.03e-05	1
BMPR2	Amp_20q12	2.06e-06	1
BMPR2	Del_18q12.2	2.14e-06	1
FKBP9	Amp_20q11.21	2.1e-05	1
KCTD3	Amp_20q11.21	2.1e-05	1
RNF43	Amp_13q12.13	2.28e-08	1
MGA	20p-Amp	2.31e-05	1
RNF43	Del_8p22	2.37e-05	1
BMPR2	Del_18p11.31	2.38e-05	1
C15orf52	Amp_20q13.12	2.51e-05	1
RNF43	Del_18q21.2	2.81e-09	1
RNF43	Amp_20q13.12	2.91e-10	1
RNF43	Del_18q22.1	2.98e-10	1
MVK	20q-Amp	2e-04	1
RNF43	Amp_13q22.1	3.08e-06	1
SETD2	Amp_20q12	3.16e-06	1
MGA	Del_18q21.2	3.21e-05	1
RNF43	20p-Amp	3.27e-05	1
RNF43	17p-Del	3.27e-06	1
BMPR2	20q-Amp	3.35e-06	1
RNF43	Del_18q12.2	3.36e-07	1
FBXW7	Del_14q31.1	3.3e-05	1
BMPR2	Del_18q21.2	3.44e-06	1
CHD3	20p-Amp	3.45e-05	1
ACVR1B	Del_18q21.2	3.47e-05	1
ZBTB20	Amp_20q12	3.6e-05	1
CHD3	Del_18q12.2	3.71e-05	1
FBXW7	Amp_13q12.13	3.81e-05	1
B2M	Amp_20q13.12	3.82e-05	1
DDX26B	Amp_20q13.12	3.82e-05	1
RNF43	20q-Amp	3.87e-10	1
CHD3	Amp_20q12	3.99e-08	1
BMPR2	Del_17p12	4.05e-05	1
MGA	Del_18q22.1	4.27e-05	1
ATM	20p-Amp	4.27e-05	1
ACVR1B	Del_18q22.1	4.35e-05	1
C15orf52	Amp_20q12	4.38e-05	1
BMPR2	Del_18q22.1	4.62e-06	1
MGA	Amp_20q11.21	4.69e-07	1
ZBTB20	20q-Amp	4.89e-05	1
RNF43	Amp_20q11.21	4.97e-10	1
CHD3	Amp_20p11.21	5.39e-06	1
ZBTB20	Amp_20q11.21	5.4e-05	1
C15orf52	20q-Amp	5.52e-05	1
BMPR2	Amp_20q11.21	5.54e-07	1
FBXW7	13q-Amp	5.89e-05	1
ALPK2	20q-Amp	5.94e-05	1
C15orf52	Amp_20q11.21	5.95e-05	1
CHD3	20q-Amp	6.22e-08	1
RNF43	18p-Del	6.25e-08	1
BMPR2	Amp_20p11.21	6.32e-05	1
BMPR2	Amp_20q13.12	6.33e-07	1
BMPR2	18q-Del	6.34e-07	1
SETD2	Amp_20q11.21	6.4e-06	1
RNF43	13q-Amp	6.83e-06	1
FKBP9	Amp_20q13.12	6.87e-06	1
KCTD3	Amp_20q13.12	6.87e-06	1
FBXW7	Amp_13q22.1	6.93e-06	1
B2M	Amp_20q12	7.12e-05	1
DDX26B	Amp_20q12	7.12e-05	1
BMPR2	Amp_13q12.13	7.19e-05	1
RNF43	Del_8p23.2	7.22e-05	1
CHD3	Amp_20q11.21	7.2e-08	1
FKBP9	20q-Amp	7.94e-07	1
SETD2	Amp_20q13.12	8.62e-07	1
MVK	Amp_20q13.12	8.88e-05	1
MGA	Amp_20q12	8.95e-06	1
FBXW7	14q-Del	8e-04	1
B2M	20q-Amp	9.21e-05	1
DDX26B	20q-Amp	9.21e-05	1
FBXW7	Amp_20q13.12	9.26e-05	1
RNF43	Del_18p11.31	9.28e-08	1
CHD3	18q-Del	9.52e-05	1
SETD2	20q-Amp	9.75e-07	1
CHD3	Del_18q21.2	9.8e-06	1
BMPR2	13q-Amp	9.98e-05	1
